Query 031744
Match_columns 153
No_of_seqs 104 out of 627
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 07:09:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nep_A EPV20, BNPC2, epididyma 100.0 3.4E-29 1.2E-33 178.8 12.7 123 23-146 2-130 (130)
2 1xwv_A DER F II; beta sheets, 100.0 3.8E-29 1.3E-33 178.3 9.5 122 23-146 2-129 (129)
3 2ag4_A GM2-AP, ganglioside GM2 99.9 5.7E-23 1.9E-27 151.8 14.0 121 22-145 3-162 (164)
4 3m7o_A Lymphocyte antigen 86; 99.8 1.2E-20 4.2E-25 137.6 11.0 113 24-142 40-159 (162)
5 3mtx_A Protein MD-1; LY86, RP1 99.7 1.4E-16 4.8E-21 114.3 13.7 119 23-147 18-143 (151)
6 3vq2_C Lymphocyte antigen 96; 99.6 1.3E-14 4.3E-19 103.7 13.1 118 23-145 15-140 (144)
7 2e56_A Lymphocyte antigen 96; 99.1 3.5E-09 1.2E-13 74.8 15.1 120 23-146 15-141 (144)
8 1kmt_A RHO GDP-dissociation in 94.7 0.23 7.9E-06 35.1 8.4 95 49-147 41-138 (141)
9 1ds6_B RHO GDP-dissociation in 94.0 0.27 9.3E-06 36.1 7.8 95 49-147 80-177 (180)
10 1doa_B RHO GDI 1, protein (GDP 93.7 0.29 1E-05 37.0 7.6 96 49-148 119-217 (219)
11 3idu_A Uncharacterized protein 91.1 2.4 8.3E-05 29.1 9.2 79 36-127 18-97 (127)
12 2r5o_A Putative ATP binding co 90.9 3.4 0.00012 29.8 10.7 92 36-130 47-149 (188)
13 2vtc_A CEL61B, cellulase; hydr 90.7 0.67 2.3E-05 35.6 6.6 38 106-143 160-204 (249)
14 1lyq_A PCOC copper resistance 90.4 0.84 2.9E-05 30.3 6.1 27 106-133 68-94 (104)
15 2c9r_A COPC, copper resistance 89.8 1 3.5E-05 29.7 6.1 27 106-133 66-92 (102)
16 1tza_A APAG protein, SOR45; st 84.8 4.7 0.00016 28.0 7.3 51 95-148 71-123 (134)
17 1xq4_A Protein APAG; all beta 84.0 4.9 0.00017 28.1 7.2 51 95-148 76-128 (139)
18 1xvs_A Protein APAG; MCSG APC2 83.6 4.6 0.00016 27.7 6.8 51 95-148 71-123 (126)
19 2f1e_A Protein APAG; APAG prot 83.2 6 0.00021 27.2 7.3 50 95-147 72-123 (127)
20 3eja_A Protein GH61E; beta san 82.3 5.3 0.00018 29.8 7.2 39 105-143 117-162 (208)
21 4eir_A Polysaccharide monooxyg 81.4 6.7 0.00023 29.6 7.5 38 106-143 133-177 (223)
22 1pfs_A PF3 SSDBP, PF3 single-s 75.5 10 0.00035 23.5 5.7 35 103-137 36-70 (78)
23 4eis_A Polysaccharide monooxyg 75.1 12 0.0004 28.2 7.2 38 106-143 136-180 (225)
24 1xwv_A DER F II; beta sheets, 71.6 4.5 0.00015 27.5 3.9 39 88-126 18-58 (129)
25 3zud_A GH61 isozyme A; hydrola 71.3 13 0.00045 28.1 6.7 38 106-143 140-184 (228)
26 1nep_A EPV20, BNPC2, epididyma 70.6 4.6 0.00016 27.5 3.7 39 88-126 20-59 (130)
27 2kut_A Uncharacterized protein 62.4 6 0.00021 27.0 2.9 81 42-129 5-95 (122)
28 2p9r_A Alpha-2-M, alpha-2-macr 58.9 14 0.00049 23.4 4.3 22 105-126 63-84 (102)
29 3isy_A Bsupi, intracellular pr 57.9 14 0.00048 25.0 4.2 78 51-130 16-105 (120)
30 3c12_A FLGD, flagellar protein 56.9 8.2 0.00028 26.4 2.9 20 114-133 79-98 (138)
31 2l0d_A Cell surface protein; s 53.2 47 0.0016 22.1 10.3 81 36-127 4-85 (114)
32 1v10_A Laccase; multicopper bl 51.8 29 0.00098 29.0 6.0 15 94-108 104-119 (521)
33 3t6v_A Laccase; beta barrel, o 51.6 13 0.00046 30.9 3.9 16 94-109 84-100 (495)
34 3pxl_A Laccase; 4-copper prote 50.6 14 0.00048 30.8 3.9 16 94-109 83-99 (499)
35 1suj_A CONE arrestin; sensory 49.8 1E+02 0.0035 25.0 10.3 30 99-128 104-149 (392)
36 3sqr_A Laccase; multicopper ox 49.4 39 0.0013 28.8 6.5 16 94-109 143-159 (580)
37 3m7o_A Lymphocyte antigen 86; 49.2 22 0.00074 25.5 4.1 30 47-76 112-142 (162)
38 1aoz_A Ascorbate oxidase; oxid 47.3 39 0.0013 28.3 6.2 16 94-109 79-95 (552)
39 2y72_A Collagenase, collagenas 45.6 50 0.0017 20.2 5.6 18 116-133 57-74 (85)
40 2yrl_A KIAA1837 protein; PKD d 45.5 57 0.002 20.8 5.6 30 117-148 68-97 (102)
41 2xom_A Arabinogalactan endo-1, 45.2 55 0.0019 22.5 5.8 30 102-133 58-87 (152)
42 2idc_A Anti-silencing protein 42.7 41 0.0014 24.4 4.8 74 36-112 5-81 (179)
43 2hue_A Anti-silencing protein 42.5 48 0.0016 24.0 5.1 75 36-113 9-86 (175)
44 2i32_A Anti-silencing factor 1 42.4 53 0.0018 23.9 5.3 103 36-143 28-139 (182)
45 3pe9_A Fibronectin(III)-like m 41.0 69 0.0024 20.5 11.1 57 57-133 19-76 (98)
46 1roc_A Anti-silencing protein 40.7 37 0.0013 24.1 4.2 78 36-117 4-87 (155)
47 4f27_A Clumping factor B; DEV- 39.5 59 0.002 25.2 5.8 41 35-75 38-81 (363)
48 2le2_A P56; UDG inhibition, DN 39.0 20 0.00069 20.4 2.1 16 118-133 8-23 (56)
49 3vmn_A Dextranase; TIM barrel, 37.1 84 0.0029 27.3 6.6 89 50-145 19-112 (643)
50 2io5_A ASF1A protein; chaperon 37.1 61 0.0021 23.4 5.0 103 36-143 6-117 (175)
51 1ex0_A Coagulation factor XIII 36.9 74 0.0025 28.1 6.3 78 49-130 76-167 (731)
52 3pdd_A Glycoside hydrolase, fa 36.8 1.1E+02 0.0038 21.7 10.7 45 71-133 124-168 (190)
53 3tas_A Small laccase, multi-co 36.3 18 0.00063 28.0 2.3 55 50-112 47-102 (313)
54 2zwn_A Two-domain type laccase 35.2 30 0.001 27.0 3.4 16 94-109 79-95 (339)
55 3mtx_A Protein MD-1; LY86, RP1 32.2 86 0.0029 22.0 4.9 28 47-74 91-119 (151)
56 2kpn_A Bacillolysin; solution 31.5 1.1E+02 0.0037 19.9 5.9 29 117-147 58-86 (103)
57 2q3z_A Transglutaminase 2; tra 30.7 2.7E+02 0.0094 24.3 9.7 80 49-130 33-125 (687)
58 1g0d_A Protein-glutamine gamma 30.4 1.9E+02 0.0064 25.4 7.8 79 49-130 34-118 (695)
59 3v0r_A Major allergen ALT A 1; 30.3 51 0.0018 22.7 3.4 44 94-139 4-52 (133)
60 1vjj_A Protein-glutamine gluta 29.8 1.6E+02 0.0056 25.7 7.3 77 49-130 31-120 (692)
61 3t9w_A Small laccase, multi-co 29.7 28 0.00094 26.8 2.3 18 93-110 98-116 (299)
62 3zx1_A Oxidoreductase, putativ 29.3 38 0.0013 28.1 3.2 16 94-109 121-137 (481)
63 4dbg_A Ranbp-type and C3HC4-ty 29.2 79 0.0027 20.6 4.2 21 112-132 15-35 (105)
64 2cu9_A Spcia1, histone chapero 29.0 85 0.0029 22.3 4.5 79 36-117 3-86 (161)
65 2q9o_A Laccase-1; multicopper 28.6 79 0.0027 26.5 5.1 16 94-109 112-129 (559)
66 2r51_A Vacuolar protein sortin 28.0 2.2E+02 0.0076 22.4 10.0 33 98-131 103-143 (340)
67 1g4m_A Beta-arrestin1; sensory 27.7 2.4E+02 0.0081 22.6 7.8 54 97-153 261-360 (393)
68 3klq_A Putative pilus anchorin 27.3 1.5E+02 0.0053 20.4 5.7 39 99-139 59-103 (141)
69 2r7e_B Coagulation factor VIII 25.2 30 0.001 30.6 1.9 53 49-108 203-256 (770)
70 3kw8_A Laccase, putative coppe 25.2 44 0.0015 25.2 2.7 53 49-109 40-93 (276)
71 3ucp_A UNDA; beta-barrel, C-ty 23.7 66 0.0023 27.2 3.8 19 1-19 1-19 (874)
72 3b83_A Ten-D3; beta sheet, com 22.2 1.3E+02 0.0044 18.2 4.1 25 108-132 56-80 (100)
73 3vq2_C Lymphocyte antigen 96; 21.8 1.7E+02 0.0057 20.4 4.8 28 46-73 88-116 (144)
74 1hfu_A Laccase 1; oxidoreducta 21.3 52 0.0018 27.2 2.6 15 94-108 83-98 (503)
75 1k85_A Chitinase A1; fibronect 21.3 1.3E+02 0.0046 17.5 4.3 23 110-132 54-76 (88)
76 2f68_X Collagen adhesin; beta 20.7 98 0.0033 24.0 3.9 90 36-128 14-116 (313)
77 3pdd_A Glycoside hydrolase, fa 20.5 2.3E+02 0.0079 19.9 10.1 62 51-133 15-76 (190)
78 1wf5_A Sidekick 2 protein; FNI 20.2 1.4E+02 0.0046 18.4 4.0 23 110-132 79-101 (121)
79 3teu_A Fibcon; FN3 domain, fib 20.1 1.3E+02 0.0044 17.9 3.8 24 109-132 57-80 (98)
No 1
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=99.96 E-value=3.4e-29 Score=178.80 Aligned_cols=123 Identities=15% Similarity=0.286 Sum_probs=107.1
Q ss_pred cccceecCcCCC--ccEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEE--cccCcCCCC-CCCCC
Q 031744 23 ATDVKYCDKNAD--YDVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHI--HSETHDLCD-ETSCP 97 (153)
Q Consensus 23 ~~~~~~C~~~~~--~~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~--~~~~~d~C~-~~~CP 97 (153)
++.|++|+++.+ ..++|.+|+..||+++||+++++++.|+++++++++++++.+.++|+++ +....|+|+ ++.||
T Consensus 2 ~~~f~~C~~~~~~i~~V~V~~C~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CP 81 (130)
T 1nep_A 2 PVKFKDCGSWVGVIKEVNVSPCPTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCP 81 (130)
T ss_dssp BCCCEESCCCSEEEEEEEEESCSSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSS
T ss_pred CcEEEECCCCCCeEeEEEECCCCCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCc
Confidence 578999997643 2456666666667799999999999999999999999999999998754 566789997 47999
Q ss_pred CCCCe-eEEEEEEEeCCCCCCeEEEEEEEEEeCCCceEEEEEEEEEEEee
Q 031744 98 VSTGD-FVVAHSQVLPGFTPPGTYSLKMKMYDATKKQVLTCITFDFSIGF 146 (153)
Q Consensus 98 l~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~ 146 (153)
+++|+ |+|+++++|++.||.++|+++|+|+|++|+. ++|++++++|+.
T Consensus 82 l~~G~~~~y~~~lpV~~~~P~~~~~v~~~L~d~~~~~-l~C~~~~~~I~~ 130 (130)
T 1nep_A 82 IEKDKTYNYVNKLPVKNEYPSIKVVVEWELTDDKNQR-FFCWQIPIEVEA 130 (130)
T ss_dssp BCTTCEEEEEEEEECCTTSCSSEEEEEEEEECTTSCE-EEEEEEEEEEEC
T ss_pred ccCCcEEEEEEEeEecccCCCccEEEEEEEEcCCCCE-EEEEEEeEEEEC
Confidence 99996 8999999999999999999999999999988 999999999973
No 2
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=99.96 E-value=3.8e-29 Score=178.35 Aligned_cols=122 Identities=21% Similarity=0.346 Sum_probs=108.3
Q ss_pred cccceecCcCCCccEEEEEE-EEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceE--EEcccCcCCCCCCCCCCC
Q 031744 23 ATDVKYCDKNADYDVKVHGV-DISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGW--HIHSETHDLCDETSCPVS 99 (153)
Q Consensus 23 ~~~~~~C~~~~~~~~~i~~v-~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~--~~~~~~~d~C~~~~CPl~ 99 (153)
++.|++|+++....++|.+| +..||+++||+++++++.|++++++++++.++.+.++|+ |++....|+|+++.||++
T Consensus 2 ~~~~~~C~~~~~~~V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~ 81 (129)
T 1xwv_A 2 QVDVKDCANNEIKKVMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLV 81 (129)
T ss_dssp BBCCEESSSSCEEEEEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBC
T ss_pred CceEEECcCCCccEEEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCccc
Confidence 57999999854345677777 677779999999999999999999999999999999887 455677899999999999
Q ss_pred CCe-eEEEEEEEeCCCCCCeE-EEEEEEEEeCCCceEEEEE-EEEEEEee
Q 031744 100 TGD-FVVAHSQVLPGFTPPGT-YSLKMKMYDATKKQVLTCI-TFDFSIGF 146 (153)
Q Consensus 100 ~G~-~~~~~~~~ip~~~P~g~-y~v~~~l~d~~~~~~i~C~-~~~v~i~~ 146 (153)
+|+ |+|+++++|++.||.++ |+++|+|+|++| . ++|+ +++++|++
T Consensus 82 ~G~~~~y~~~~~v~~~~P~v~~~~v~~~L~d~~~-~-l~Cf~~~~~~I~~ 129 (129)
T 1xwv_A 82 KGQQYDAKYTWNVPKIAPKSENVVVTVKLVGDNG-V-LACAIATHAKIRD 129 (129)
T ss_dssp TTCEEEEEEEEECCTTSCCBSCEEEEEEEEETTE-E-EEEEEECCEEEEC
T ss_pred CCEEEEEEEEeEecccCCCCceEEEEEEEEcCCC-c-EEEEecccEEEeC
Confidence 996 89999999999999999 999999999988 7 9999 99999974
No 3
>2ag4_A GM2-AP, ganglioside GM2 activator; complex of single chain lipid and fatty acids, lipid binding; HET: LP3 OLA; 1.80A {Homo sapiens} SCOP: b.95.1.1 PDB: 1tjj_A* 2af9_A* 2ag2_A* 1pu5_A* 2ag9_A* 1g13_A* 1pub_A* 2agc_A*
Probab=99.90 E-value=5.7e-23 Score=151.83 Aligned_cols=121 Identities=21% Similarity=0.408 Sum_probs=105.7
Q ss_pred ccccceecCcCCCccEEEEEEEEecCCCCCCceEEEEEEEEeceeecCc-EEEEEEEE---ce-EEEcccC-------cC
Q 031744 22 RATDVKYCDKNADYDVKVHGVDISPYPVARGREATFSISATTDKAISGG-KLVIDVSY---FG-WHIHSET-------HD 89 (153)
Q Consensus 22 ~~~~~~~C~~~~~~~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~---~~-~~~~~~~-------~d 89 (153)
....|++|+++ .+.++|.+++++|+|+++|+++++++++.+++++++| ++++.+.+ |+ +++|..+ .|
T Consensus 3 ~~~~~~~C~~~-~~~~~i~~v~i~PdP~~~g~~~ti~~~~~l~~~i~~g~k~~v~v~~~~~g~~i~l~~~~~~GSC~y~D 81 (164)
T 2ag4_A 3 SSFSWDNCDEG-KDPAVIRSLTLEPDPIVVPGNVTLSVVGSTSVPLSSPLKVDLVLEKEVAGLWIKIPCTDYIGSCTFEH 81 (164)
T ss_dssp CCCEEEESSTT-TCSEEEEEEEEESSSEEESEEEEEEEEEEESSCBCSSCEEEEEEEEEETTEEEECBCBTTBSBCEECC
T ss_pred ccCEEecCCCC-CceEEEeEEEEeCCCCCCCCceEEEEEEEEeeccCCCCEEEEEEEEEecCceEEeeeeCCcCcccccc
Confidence 35789999885 5689999999999999999999999999999999999 68888776 34 5787776 69
Q ss_pred CCCCC---------------------CCCCCCCeeEEEEEE------EeCCCCCCeEEEEEEEEEeCCCceEEEEEEEEE
Q 031744 90 LCDET---------------------SCPVSTGDFVVAHSQ------VLPGFTPPGTYSLKMKMYDATKKQVLTCITFDF 142 (153)
Q Consensus 90 ~C~~~---------------------~CPl~~G~~~~~~~~------~ip~~~P~g~y~v~~~l~d~~~~~~i~C~~~~v 142 (153)
+|+.+ +||+++|+|..+.+. .+|.++|+|+|++++.+.| +|++ ++|+++.+
T Consensus 82 lC~~l~~~~~~~~~~~~~~~~~g~~~~CPi~~G~Y~l~~~~~~lp~~~lP~~l~~G~Y~v~~~~~~-~~~~-l~Ci~~~~ 159 (164)
T 2ag4_A 82 FCDVLDMLIPTGEPCPEPLRTYGLPCHCPFKEGTYSLPKSEFVVPDLELPSWLTTGNYRIESVLSS-SGKR-LGCIKIAA 159 (164)
T ss_dssp HHHHHHHHSCTTSCCCTTHHHHTCCCSSCBCSEEEEEEEEEEEECCCCCCTTCSSEEEEEEEEEEE-TTEE-EEEEEEEE
T ss_pred hhHhhhhhcccccccCcccccCCccccCCCCCcEEEEeeeEeecCcccccCccCCceEEEEEEEec-CCCE-EEEEEEEE
Confidence 99952 899999999776654 8889999999999999977 7788 99999999
Q ss_pred EEe
Q 031744 143 SIG 145 (153)
Q Consensus 143 ~i~ 145 (153)
+|.
T Consensus 160 ~l~ 162 (164)
T 2ag4_A 160 SLK 162 (164)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 4
>3m7o_A Lymphocyte antigen 86; beta sheet, glycoprotein, immunity, inflammatory response, I immunity, secreted, immune system; HET: NAG L9R NDG; 1.65A {Mus musculus} PDB: 3t6q_C* 3b2d_C* 3rg1_C*
Probab=99.84 E-value=1.2e-20 Score=137.58 Aligned_cols=113 Identities=21% Similarity=0.325 Sum_probs=101.2
Q ss_pred ccceecCcCCCccEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCC-----CCCCC
Q 031744 24 TDVKYCDKNADYDVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDE-----TSCPV 98 (153)
Q Consensus 24 ~~~~~C~~~~~~~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~-----~~CPl 98 (153)
+.|++|+... + .+++++||++.+|++.++++.+.++++++...+++.+.+++++++..++|+|++ +.||+
T Consensus 40 v~Y~~CD~~q--~---~~vsi~PC~~~~G~nl~i~a~~Ilr~dI~~ly~~l~v~~~~i~l~~~~~~lCe~~~~~~sfCp~ 114 (162)
T 3m7o_A 40 VVYQSCDPLQ--D---FGLSIDQCSKQIQSNLNIRFGIILRQDIRKLFLDITLMAKGSSILNYSYPLCEEDQPKFSFCGR 114 (162)
T ss_dssp EEEEECCTTC--C---CEEEESSCCSEECSSCEEEEEEECSSCCSEEEEEEEEEETTEEEEEEEEEEEETTBSSSSSTTC
T ss_pred EEEEeCCCCC--C---ceEECCCCCCCCCCcEEEEEEEEEcccceeeEEEEEEEECCEEccccccccccCCCCccccCCc
Confidence 4668897754 2 466999999999999999999999999997678999999999999999999997 37999
Q ss_pred CCCee-EEEEEEEeCC-CCCCeEEEEEEEEEeCCCceEEEEEEEEE
Q 031744 99 STGDF-VVAHSQVLPG-FTPPGTYSLKMKMYDATKKQVLTCITFDF 142 (153)
Q Consensus 99 ~~G~~-~~~~~~~ip~-~~P~g~y~v~~~l~d~~~~~~i~C~~~~v 142 (153)
.+|+. .++..+.+|. .+|+|+|++.+++++++++. ++|.++.+
T Consensus 115 ~KGE~v~~~~~v~~p~~e~P~G~Y~v~aea~~~d~~~-i~Cln~TI 159 (162)
T 3m7o_A 115 RKGEQIYYAGPVNNPGLDVPQGEYQLLLELYNENRAT-VACANATV 159 (162)
T ss_dssp CTTCEEEEEEECCCCEEECCSEEEEEEEEEEETTCCE-EEEEEEEE
T ss_pred CCCeEEEEEEEeecCceecCCCcEEEEEEEEcCCCCE-EEEeEEEE
Confidence 99985 8899999998 59999999999999999888 99999965
No 5
>3mtx_A Protein MD-1; LY86, RP105 associated protein, immune system; HET: PGT PGE; 2.00A {Gallus gallus} PDB: 3mu3_A*
Probab=99.72 E-value=1.4e-16 Score=114.29 Aligned_cols=119 Identities=14% Similarity=0.202 Sum_probs=105.9
Q ss_pred cccceecCcCCCccEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCC-----CCC
Q 031744 23 ATDVKYCDKNADYDVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDET-----SCP 97 (153)
Q Consensus 23 ~~~~~~C~~~~~~~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~-----~CP 97 (153)
.+.|+.|+.-. -.+++++||+-.+|++..|++.+.+.++++...+++.+.++++.++..++++|++. -||
T Consensus 18 ei~Y~~CD~~q-----~~~isi~pC~~~~~~~l~I~~~~IlR~dIkelY~~l~v~~~~~~ll~~~e~LCe~~~~~~sfC~ 92 (151)
T 3mtx_A 18 EIYYKSCDPQQ-----DFAFSIDRCSDVTTHTFDIRAAMVLRQSIKELYAKVDLIINGKTVLSYSETLCGPGLSKLIFCG 92 (151)
T ss_dssp EEEEEECCTTC-----CCEEEESCGGGGGGTEEEEEEEEECCSCCSSEEEEEEEEETTEEEEEEEEEEESTTCCCSTTTT
T ss_pred EEEEEecCCcc-----CcEEEcccCccccCCcEEEEEEEEEhhhhheeEEEEEEEECcEeeeecccccccCCCCcccccC
Confidence 36788996543 34889999999999999999999999999998889999999999999999999973 799
Q ss_pred CCCCee-EEEEEEEeCC-CCCCeEEEEEEEEEeCCCceEEEEEEEEEEEeec
Q 031744 98 VSTGDF-VVAHSQVLPG-FTPPGTYSLKMKMYDATKKQVLTCITFDFSIGFA 147 (153)
Q Consensus 98 l~~G~~-~~~~~~~ip~-~~P~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~~ 147 (153)
..+|+. .++..+.+|. .+|+|+|++-+++++++++. ++|++|.+--..+
T Consensus 93 ~~KGE~i~~~~~v~~pg~~~p~G~Y~vvaea~~~d~~~-I~CLn~Tii~~~~ 143 (151)
T 3mtx_A 93 KKKGEHLYYEGPITLGIKEIPQRDYTITARLTNEDRAT-VACADFTVKNYLD 143 (151)
T ss_dssp CCTTCEEEEEEEEECCCSSCCCEEEEEEEEEEETTSCE-EEEEEEEEEECC-
T ss_pred ccCCeeEEEEEEeecCceecCCCcEEEEEEEEcCCCCE-EEEeeEEEEEEec
Confidence 999986 9999999998 89999999999999999888 9999998875543
No 6
>3vq2_C Lymphocyte antigen 96; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_C* 2z64_C*
Probab=99.61 E-value=1.3e-14 Score=103.71 Aligned_cols=118 Identities=15% Similarity=0.269 Sum_probs=102.8
Q ss_pred cccceecCcCCCccEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCC-----CCC
Q 031744 23 ATDVKYCDKNADYDVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDET-----SCP 97 (153)
Q Consensus 23 ~~~~~~C~~~~~~~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~-----~CP 97 (153)
.+.|++|+... . ..+++++||...+|++..+++.+.+.++++...+++.+..+++++|..++++|.+. -||
T Consensus 15 eV~Y~~CD~~q-~---~~~isvdpC~~~~gs~~~l~~~~IpR~Dik~Ly~~~~l~~~~~~lp~~~e~iC~g~~~~ySfCg 90 (144)
T 3vq2_C 15 IISYSYCDHLK-F---PISISSEPCIRLRGTNGFVHVEFIPRGNLKYLYFNLFISVNSIELPKRKEVLCHGHDDDYSFCR 90 (144)
T ss_dssp EEEEEEBTTBC-C---CEEEEEESCCCTTCEEEEEEEEECCSSCCTTEEEEEEEEETTEECCCEEEESCCSSSCSSGGGG
T ss_pred EEEEEeCCCcc-C---CcEEeccccccccCCCcEEEEEEEEcCcceeEEEEEEEeecccccccCccCcccCCCCcceecc
Confidence 47899998753 1 34569999999999999999999999999988888888888899999999999972 699
Q ss_pred CCCCe-eEEEEEEEeCCC-CCCeEEEEEEEEEeCC-CceEEEEEEEEEEEe
Q 031744 98 VSTGD-FVVAHSQVLPGF-TPPGTYSLKMKMYDAT-KKQVLTCITFDFSIG 145 (153)
Q Consensus 98 l~~G~-~~~~~~~~ip~~-~P~g~y~v~~~l~d~~-~~~~i~C~~~~v~i~ 145 (153)
..+|+ +.|++.+.++.+ +|.|.|++-+++.+++ ... ++|.+|.+-..
T Consensus 91 ~~KGE~i~~~~~~~~~~~~fpkG~Y~~v~e~~~gd~~~~-l~ClnfTii~~ 140 (144)
T 3vq2_C 91 ALKGETVNTSIPFSFEGILFPKGHYRCVAEAIAGDTEEK-LFCLNFTIIHR 140 (144)
T ss_dssp CCTTCCEEEEEEEEECCCCCCSSEEEEEEEEEETTTTEE-EEEEEEEEEC-
T ss_pred cccCcEEEEEEEeecCcEEccCCcEEEEEEEecCCcccE-EEEeeEEEEEe
Confidence 99996 799999999988 9999999999999988 556 99999988654
No 7
>2e56_A Lymphocyte antigen 96; innate immunity, lipid-binding, lipid binding protein; HET: NAG MYR; 2.00A {Homo sapiens} PDB: 2e59_A* 3fxi_C* 3ula_B* 2z65_C*
Probab=99.14 E-value=3.5e-09 Score=74.78 Aligned_cols=120 Identities=14% Similarity=0.261 Sum_probs=101.1
Q ss_pred cccceecCcCCCccEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCC-----CCC
Q 031744 23 ATDVKYCDKNADYDVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDET-----SCP 97 (153)
Q Consensus 23 ~~~~~~C~~~~~~~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~-----~CP 97 (153)
.+.|+.|+.-. . -.+++++||.-.+|.+..+++...+.+++....+++.+...++.+|..++..|.+. -|-
T Consensus 15 ei~Y~sCD~~q-~---~~sin~~pC~~~~~~~~~l~~~~IpR~Dik~Ly~nl~l~~~~~~~~~~ke~iC~g~dd~ySFC~ 90 (144)
T 2e56_A 15 SISYTYCDKMQ-Y---PISINVNPCIELKGSKGLLHIFYIPRRDLKQLYFNLYITVNTMNLPKRKEVICRGSDDDYSFCR 90 (144)
T ss_dssp EEEEEECSSCC-S---CCEEEEESCCCTTCEEEEEEEEECCSSCCTTCEEEEEEEETTEECCCEEEECSCSSSSSCGGGG
T ss_pred EEEEeecCccc-C---CcEeccchhhhhccCceEEEEEEEEhhHHHHHhhhheeeeccccccccccccccCCCCCceeec
Confidence 36789997643 1 23788999999999999999999999999999999999999999999999999873 599
Q ss_pred CCCCe-eEEEEEEEeC-CCCCCeEEEEEEEEEeCCCceEEEEEEEEEEEee
Q 031744 98 VSTGD-FVVAHSQVLP-GFTPPGTYSLKMKMYDATKKQVLTCITFDFSIGF 146 (153)
Q Consensus 98 l~~G~-~~~~~~~~ip-~~~P~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~ 146 (153)
-.+|+ ..++..+..+ ..+|.|.|++.+++++++.++.++|++|.+-...
T Consensus 91 ~lKGEti~t~~p~s~~g~~fpkG~Y~~~~ea~~~~~e~~l~ClNfTii~~~ 141 (144)
T 2e56_A 91 ALKGETVNTTISFSFKGIKFSKGKYKCVVEAISGSPEEMLFCLEFVILHQP 141 (144)
T ss_dssp CCTTCCEEEEEEEEECCCTTCCSEEEEEEEEEETTTTEEEEEEEEEEEECT
T ss_pred cccCceEEEeeecccCcEecCCCcEEEEEEEecCCchheEEEeeEEEEEcc
Confidence 99997 5677777776 5589999999999999776444999999886543
No 8
>1kmt_A RHO GDP-dissociation inhibitor 1; immunoglobulin fold, beta sandwich motif, isoprenyl-binding, protein binding; 1.30A {Homo sapiens} SCOP: b.1.18.8 PDB: 2jhu_A 2jhv_A 2jhw_A 1ft3_A 1ft0_A 1qvy_A 2jhz_A 2bxw_A 2jhx_A 2jhy_A 1rho_A 1fso_A 2ji0_A 2jhs_A* 2jht_A 1ajw_A 1gdf_A
Probab=94.67 E-value=0.23 Score=35.09 Aligned_cols=95 Identities=20% Similarity=0.284 Sum_probs=61.5
Q ss_pred CCCCceEEEEEEEEeceeecCc-EEEEEEEEceEEEcccCcCCCCCCCCCCCCCeeEEEEEE-EeC-CCCCCeEEEEEEE
Q 031744 49 VARGREATFSISATTDKAISGG-KLVIDVSYFGWHIHSETHDLCDETSCPVSTGDFVVAHSQ-VLP-GFTPPGTYSLKMK 125 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~-~ip-~~~P~g~y~v~~~ 125 (153)
++-|....+.++|.++.++-+| +..-.++-.|+++-....-+=. ..|- +..|++.... ..| .++-.|+|+++-+
T Consensus 41 iKEG~~Y~iki~F~V~~eivsGLkY~q~v~r~Gi~Vdk~~~mlGs--y~P~-~e~y~~~~~~eeaPsG~laRG~Y~a~s~ 117 (141)
T 1kmt_A 41 LKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGS--YGPR-AAAYEFLTPVEEAPKGMLARGSYSIKSR 117 (141)
T ss_dssp EETTCEEEEEEEEEECSSCEEEEEEEEEEEETTEEEEEEEEEEEE--ECCC-SSCEEEECCCEECCCSTTTCEEEEEEEE
T ss_pred ccCCcEEEEEEEEEEccccccCcEEEEEEEECCEEECcceEeeec--cCCC-CCcceecCCCccCCceeEEeeeeeeeEE
Confidence 5568889999999999887777 5555566678765433221111 1231 2235544321 122 3344579999999
Q ss_pred EEeCCCceEEEEEEEEEEEeec
Q 031744 126 MYDATKKQVLTCITFDFSIGFA 147 (153)
Q Consensus 126 l~d~~~~~~i~C~~~~v~i~~~ 147 (153)
+.|+++.. ..=++-.+.|+++
T Consensus 118 F~DDD~~~-hl~~~w~feI~Kd 138 (141)
T 1kmt_A 118 FTDDDKTD-HLSWEWNLTIKKD 138 (141)
T ss_dssp EECTTCCC-SEEEEEEEEEESC
T ss_pred EEcCCCcE-EEEEEEeEEEecC
Confidence 99999877 6778888888876
No 9
>1ds6_B RHO GDP-dissociation inhibitor 2; beta sandwhich, protein-protein complex, G-domain, immunoglobulin fold, walker fold, GTP-binding protein; HET: GDP; 2.35A {Homo sapiens} SCOP: b.1.18.8 PDB: 1fst_A
Probab=93.97 E-value=0.27 Score=36.12 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=61.3
Q ss_pred CCCCceEEEEEEEEeceeecCc-EEEEEEEEceEEEcccCcCCCCCCCCCCCCCeeEEEEEE-EeC-CCCCCeEEEEEEE
Q 031744 49 VARGREATFSISATTDKAISGG-KLVIDVSYFGWHIHSETHDLCDETSCPVSTGDFVVAHSQ-VLP-GFTPPGTYSLKMK 125 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~-~ip-~~~P~g~y~v~~~ 125 (153)
++-|....+.++|.+++++-+| +..-.++-.|+++-.... ..+. ..|- ...|++.+.. ..| .++-.|+|+++-+
T Consensus 80 iKEGs~Y~iki~F~V~~eivsGLkY~q~v~r~Gi~Vdk~~~-mlGs-y~P~-~e~y~~~~p~eeaPsG~laRG~Y~a~sk 156 (180)
T 1ds6_B 80 LKEGSEYRVKIHFKVNRDIVSGLKYVQHTYRTGVKVDKATF-MVGS-YGPR-PEEYEFLTPVEEAPKGMLARGTYHNKSF 156 (180)
T ss_dssp EETTCEEEEEEEECCCSSCEEEEEEEEEEEETTEEEEEEEE-EEEE-ECCC-SSCEEEECCCEECCCSTTTCEEEEEEEE
T ss_pred ecCCcEEEEEEEEEEecccccCcEEEEEEEECCEEECCceE-eeec-cCCC-CCceeecCCCccCCcceeeeeeeeeeEE
Confidence 4568888889999998877777 555556667776533221 1111 1231 2225544331 122 3344589999999
Q ss_pred EEeCCCceEEEEEEEEEEEeec
Q 031744 126 MYDATKKQVLTCITFDFSIGFA 147 (153)
Q Consensus 126 l~d~~~~~~i~C~~~~v~i~~~ 147 (153)
+.|+++.. ..=++-.+.|+++
T Consensus 157 F~DDD~~~-hl~~~wsfeI~Kd 177 (180)
T 1ds6_B 157 FTDDDKQD-HLSWEWNLSIKKE 177 (180)
T ss_dssp EECTTCCC-CEEEEEEEEEESS
T ss_pred EEcCCCce-EEEEEEEEEEeeC
Confidence 99999877 7778888888876
No 10
>1doa_B RHO GDI 1, protein (GDP-dissociation inhibitor 1); GTP-binding protein, CDC42, cell cycle; HET: GDP GER; 2.60A {Bos taurus} SCOP: b.1.18.8 PDB: 1hh4_D* 1cc0_E*
Probab=93.67 E-value=0.29 Score=36.98 Aligned_cols=96 Identities=18% Similarity=0.294 Sum_probs=61.8
Q ss_pred CCCCceEEEEEEEEeceeecCc-EEEEEEEEceEEEcccCcCCCCCCCCCCCCCeeEEEEEE-EeC-CCCCCeEEEEEEE
Q 031744 49 VARGREATFSISATTDKAISGG-KLVIDVSYFGWHIHSETHDLCDETSCPVSTGDFVVAHSQ-VLP-GFTPPGTYSLKMK 125 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~-~ip-~~~P~g~y~v~~~ 125 (153)
++-|..+.+.++|.+++++-+| +..-.++..|+++-.... ..+. ..|-. -.|++.+.. ..| .++-.|+|+++-+
T Consensus 119 IKEGs~Y~lki~FkV~~eIVsGLkY~q~VkR~GI~Vdk~~~-MlGS-Y~P~~-e~y~~~~p~EeAPSGmLARG~Y~akSk 195 (219)
T 1doa_B 119 LKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDY-MVGS-YGPRA-EEYEFLTPMEEAPKGMLARGSYNIKSR 195 (219)
T ss_dssp EETTCEEEEEEEECBCSSCEEEEEEEEEEEETTEEEEEEEE-EEEE-ECCCS-SCEEEECCCEECCCTTSCCSEEEEEEE
T ss_pred ecCCCEEEEEEEEEEecceecCcEEEEEEEECCeEECCcce-eeec-cCCCC-CcccccCCCccCCccceeeeeeeeeEE
Confidence 5568888889999999887677 555566677886643322 1111 12322 125543321 122 3344579999999
Q ss_pred EEeCCCceEEEEEEEEEEEeecc
Q 031744 126 MYDATKKQVLTCITFDFSIGFAS 148 (153)
Q Consensus 126 l~d~~~~~~i~C~~~~v~i~~~~ 148 (153)
+.|++++. ..=++-.+.|+++-
T Consensus 196 F~DDD~~~-hL~~eWsfeI~KdW 217 (219)
T 1doa_B 196 FTDDDRTD-HLSWEWNLTIKKEW 217 (219)
T ss_dssp EECTTCCC-CEEEEEEEEEESST
T ss_pred EEeCCCce-EEEEEEEEEEecCC
Confidence 99999877 77788889888763
No 11
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=91.11 E-value=2.4 Score=29.09 Aligned_cols=79 Identities=15% Similarity=0.202 Sum_probs=54.8
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCCCCCCCCCe-eEEEEEEEeCCC
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDETSCPVSTGD-FVVAHSQVLPGF 114 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~~ip~~ 114 (153)
.+.+ +++ .|..+..|+..+++++..-......+..++.++.+|-.+-.. .-.+.+|. -++++++. |.
T Consensus 18 DL~V-~is-~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng~~v~t~--------~v~La~G~s~tv~f~~~-~~- 85 (127)
T 3idu_A 18 DLTV-EIK-GPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYINGTLYKNW--------TVSLGPKEEKVLTFNWT-PT- 85 (127)
T ss_dssp CEEE-EEE-SCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEETTEEEEEE--------EEEECTTCEEEEEEEEC-CS-
T ss_pred CeEE-Eec-CCCcccCCCEEEEEEEEEECCCCccCCcEEEEEECCEEEeeE--------EeccCCCCeEEEEEEEE-cC-
Confidence 4677 665 788899999999999877666555556778887777543222 11478886 46666654 32
Q ss_pred CCCeEEEEEEEEE
Q 031744 115 TPPGTYSLKMKMY 127 (153)
Q Consensus 115 ~P~g~y~v~~~l~ 127 (153)
..|.|++++.+-
T Consensus 86 -~~G~~~v~AvVD 97 (127)
T 3idu_A 86 -QEGMYRINATVD 97 (127)
T ss_dssp -SCEEEEEEEEES
T ss_pred -CCcEEEEEEEEc
Confidence 389999998754
No 12
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=90.88 E-value=3.4 Score=29.79 Aligned_cols=92 Identities=16% Similarity=0.126 Sum_probs=59.9
Q ss_pred cEEEEEEEEe-----c-CCCCCCceEEEEEEEEeceeecCcEEEEEEEE-ceEEEcccCcCCCCCCCC-C--CCCCee-E
Q 031744 36 DVKVHGVDIS-----P-YPVARGREATFSISATTDKAISGGKLVIDVSY-FGWHIHSETHDLCDETSC-P--VSTGDF-V 104 (153)
Q Consensus 36 ~~~i~~v~i~-----P-c~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~-~~~~~~~~~~d~C~~~~C-P--l~~G~~-~ 104 (153)
.++|.++.+. | ..+..|+++++++...+.+++....+-+.++- .|..+...+... ....= | +.+|++ .
T Consensus 47 ~a~I~~v~l~d~~G~~~~~~~~Ge~v~l~i~~~~~~~i~~~v~G~~Ik~~~G~~I~g~nT~~-~~~~~~~~~~~~G~~~~ 125 (188)
T 2r5o_A 47 GAKIIDYHIQSAGVDFPPSLTGNQQTDFLMKVVFEYDFDCVVPGILIKTLDGLFLYGTNSFL-ASEGRENISVSRGDVRV 125 (188)
T ss_dssp SEEEEEEEEEETTEESCSSEETTCEEEEEEEEEESSCEEEEEEEEEEEETTCCEEEEEEHHH-HTTTCCCEEECTTCEEE
T ss_pred cEEEEEEEEEECCCCEeeEEeCCCEEEEEEEEEECCcCCccEEEEEEECCCCCEEEecCccc-ccccccccccCCCCEEE
Confidence 6889999884 2 23789999999999999988765544333322 244554432110 01111 1 478875 6
Q ss_pred EEEEEEeCCCCCCeEEEEEEEEEeCC
Q 031744 105 VAHSQVLPGFTPPGTYSLKMKMYDAT 130 (153)
Q Consensus 105 ~~~~~~ip~~~P~g~y~v~~~l~d~~ 130 (153)
..+.+++ .+.+|.|.+.+.+.+.+
T Consensus 126 v~f~f~l--~L~~G~Y~lsv~i~~~~ 149 (188)
T 2r5o_A 126 FKFSLPV--DLNSGDYLLSFGISAGN 149 (188)
T ss_dssp EEEEEEC--CBCSEEEEEEEEEEEEE
T ss_pred EEEEEec--ccCCCeEEEEEEEecCC
Confidence 6666664 47799999999998865
No 13
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=90.67 E-value=0.67 Score=35.63 Aligned_cols=38 Identities=16% Similarity=0.413 Sum_probs=30.2
Q ss_pred EEEEEeCCCCCCeEEEEEEEEE-----eC-CCceE-EEEEEEEEE
Q 031744 106 AHSQVLPGFTPPGTYSLKMKMY-----DA-TKKQV-LTCITFDFS 143 (153)
Q Consensus 106 ~~~~~ip~~~P~g~y~v~~~l~-----d~-~~~~~-i~C~~~~v~ 143 (153)
++++.||+.+|+|+|-+|+++. ++ .|.|- +.|+++.|+
T Consensus 160 ~~~~tIP~~l~~G~YLlR~E~iALH~a~~~ggaQfY~~Caqi~Vt 204 (249)
T 2vtc_A 160 KWTVKIPSSLRPGNYVFRHELLAAHGASSANGMQNYPQCVNIAVT 204 (249)
T ss_dssp EEEEECCTTBCSEEEEEEEEEEECTTTTSTTCCEEEEEEEEEEEE
T ss_pred eeEEEcCCCCCCcceEEEEEeeeccccccCCCceechhhEEEEEc
Confidence 5678999999999999999988 33 33332 789999886
No 14
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=90.36 E-value=0.84 Score=30.29 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=21.9
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeCCCce
Q 031744 106 AHSQVLPGFTPPGTYSLKMKMYDATKKQ 133 (153)
Q Consensus 106 ~~~~~ip~~~P~g~y~v~~~l~d~~~~~ 133 (153)
.+.++++ -.++|.|+|+|+....||..
T Consensus 68 ~~~~~l~-~L~~G~YtV~WrvvS~DGH~ 94 (104)
T 1lyq_A 68 MVIIPRE-PLPAGTYRVDWRAVSSDTHP 94 (104)
T ss_dssp EEEEESS-CCCSEEEEEEEEECCTTSCC
T ss_pred EEEEECC-CCCCceEEEEEEEEecCCCc
Confidence 3455566 57899999999999999876
No 15
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=89.83 E-value=1 Score=29.74 Aligned_cols=27 Identities=11% Similarity=0.071 Sum_probs=21.8
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeCCCce
Q 031744 106 AHSQVLPGFTPPGTYSLKMKMYDATKKQ 133 (153)
Q Consensus 106 ~~~~~ip~~~P~g~y~v~~~l~d~~~~~ 133 (153)
.+.++++ ..++|.|+|+|+....||..
T Consensus 66 ~~~~~l~-~L~~G~YtV~WrvvS~DGH~ 92 (102)
T 2c9r_A 66 MVITPAS-PLTAGTYKVDWRAVSSDTFP 92 (102)
T ss_dssp EEEEESS-CCCSEEEEEEEEECCTTCCC
T ss_pred EEEEECC-CCCCceEEEEEEEEecCCCc
Confidence 3455565 67899999999999999876
No 16
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=84.79 E-value=4.7 Score=28.02 Aligned_cols=51 Identities=18% Similarity=0.265 Sum_probs=37.6
Q ss_pred CCCC-CCCe-eEEEEEEEeCCCCCCeEEEEEEEEEeCCCceEEEEEEEEEEEeecc
Q 031744 95 SCPV-STGD-FVVAHSQVLPGFTPPGTYSLKMKMYDATKKQVLTCITFDFSIGFAS 148 (153)
Q Consensus 95 ~CPl-~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~~~ 148 (153)
.-|+ .+|+ |.|+-...++ .|.|.....+.+.+++|+. +-+---.|.+..+.
T Consensus 71 eqP~L~PGe~F~YtSg~~L~--Tp~G~M~G~y~m~~~~G~~-F~v~Ip~F~L~~P~ 123 (134)
T 1tza_A 71 ETPTIPPNTAYQYTSGTVLD--TPFGIMYGTYGMVSESGEH-FNAIIKPFRLATPG 123 (134)
T ss_dssp BCCEECTTEEEEEEEEEEES--SSEEEEEEEEEEEETTCCE-EEEEEEEEEEECTT
T ss_pred CCCcCCCCCceEEcCCcCcC--CCceEEEEEEEEEECCCCE-EEEECCCeEccCCC
Confidence 4554 7897 6666665555 5799999999999999987 77666677776554
No 17
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=83.95 E-value=4.9 Score=28.09 Aligned_cols=51 Identities=20% Similarity=0.305 Sum_probs=37.6
Q ss_pred CCCC-CCCe-eEEEEEEEeCCCCCCeEEEEEEEEEeCCCceEEEEEEEEEEEeecc
Q 031744 95 SCPV-STGD-FVVAHSQVLPGFTPPGTYSLKMKMYDATKKQVLTCITFDFSIGFAS 148 (153)
Q Consensus 95 ~CPl-~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~~~ 148 (153)
.-|+ .+|+ |.|+-...++ .|.|.....+.+.+++|+. +-+---.|.+..+.
T Consensus 76 eqPvL~PGe~F~YtSg~~L~--Tp~G~M~G~y~m~~~~G~~-F~v~Ip~F~L~~P~ 128 (139)
T 1xq4_A 76 QQPLLAPGETFEYTSGCPLP--TPIGTMRGTYHCVGENGIP-FEVPIAEFLLAMPR 128 (139)
T ss_dssp CCCEECTTCEEEEEEEEEES--SSEEEEEEEEEEEETTSCE-EEEEEEEEEEECTT
T ss_pred CCCcCCCCCceEEcCCcCcC--CCceEEEEEEEEEeCCCCE-EEEECCCeEcCCCC
Confidence 5665 7887 6666665555 5799999999999999987 76666667766543
No 18
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=83.59 E-value=4.6 Score=27.71 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=36.9
Q ss_pred CCCC-CCCe-eEEEEEEEeCCCCCCeEEEEEEEEEeCCCceEEEEEEEEEEEeecc
Q 031744 95 SCPV-STGD-FVVAHSQVLPGFTPPGTYSLKMKMYDATKKQVLTCITFDFSIGFAS 148 (153)
Q Consensus 95 ~CPl-~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~~~ 148 (153)
.-|+ .+|+ |.|+-...++ .|.|.....+.+.+++|+. +-+---.|.+..+.
T Consensus 71 ~qP~L~PGe~f~YtSg~~L~--tp~G~M~G~y~m~~~~G~~-F~v~Ip~F~L~~P~ 123 (126)
T 1xvs_A 71 EQPRIKANDEYTYSSGTALD--TPVGVMQGQYLMIDEQGES-FTVEIEPFRLAVPH 123 (126)
T ss_dssp BCCEECTTCEEEEEEEEEES--SSEEEEEEEEEEECTTSCE-EEEEEEEEEEECCC
T ss_pred CCCcCCCCCceEEeCCcCcC--CCcEEEEEEEEEEECCCCE-EEEECCceEcCCcc
Confidence 4554 7886 6666665555 5789999999999999887 66666666666543
No 19
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=83.24 E-value=6 Score=27.15 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=35.6
Q ss_pred CCCC-CCCe-eEEEEEEEeCCCCCCeEEEEEEEEEeCCCceEEEEEEEEEEEeec
Q 031744 95 SCPV-STGD-FVVAHSQVLPGFTPPGTYSLKMKMYDATKKQVLTCITFDFSIGFA 147 (153)
Q Consensus 95 ~CPl-~~G~-~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~~ 147 (153)
.-|+ .+|+ |.|+-...++ .|.|.....+.+.+++|+. +-+---.|.+..+
T Consensus 72 ~qP~L~PGe~f~YtSg~~L~--tp~G~M~G~y~m~~~~G~~-F~v~Ip~F~L~~P 123 (127)
T 2f1e_A 72 EQPWLRPGEAFHYTSGVLLE--TEQGQMQGHYDMVADDGTE-FIAPIAAFVLSVP 123 (127)
T ss_dssp BCCEECTTCEEEEEEEEEES--SSCEEEEEEEEEEETTCCE-EEEEEEEEEEC--
T ss_pred CCCcCCCCCceEEeCCcCcC--CCcEEEEEEEEEEECCCCE-EEEECCceEcCCC
Confidence 4554 7886 6776666665 5789999999999999887 6666666666544
No 20
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=82.30 E-value=5.3 Score=29.79 Aligned_cols=39 Identities=15% Similarity=0.336 Sum_probs=30.1
Q ss_pred EEEEEEeCCCCCCeEEEEEEEEEeC------CCceE-EEEEEEEEE
Q 031744 105 VAHSQVLPGFTPPGTYSLKMKMYDA------TKKQV-LTCITFDFS 143 (153)
Q Consensus 105 ~~~~~~ip~~~P~g~y~v~~~l~d~------~~~~~-i~C~~~~v~ 143 (153)
.++++.||+.+|+|.|-+|.++.-= .+.|- +.|+++.|+
T Consensus 117 ~~~~~~iP~~l~~G~YllR~E~ialh~a~~~~~~qfY~~Caqi~Vt 162 (208)
T 3eja_A 117 SSFAVPIPPCIKSGYYLLRAEQIGLHVAQSVGGAQFYISCAQLSVT 162 (208)
T ss_dssp CEEEEECCSSBCSEEEEEEEEEEECTTTTSTTCCEEEEEEEEEEEE
T ss_pred CceEEeccCCCCCcceEEEeeeeeecccccCCCCcccccceEEEEe
Confidence 3567799999999999999987762 23332 689999886
No 21
>4eir_A Polysaccharide monooxygenase-2; GH61, PMO, cellulase, biofuels copper monooxygenase, peroxide, superoxide, CBP21, beta-SAN fold, secreted; HET: HIC NAG GOL; 1.10A {Neurospora crassa}
Probab=81.37 E-value=6.7 Score=29.56 Aligned_cols=38 Identities=26% Similarity=0.525 Sum_probs=29.5
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeC------CCceE-EEEEEEEEE
Q 031744 106 AHSQVLPGFTPPGTYSLKMKMYDA------TKKQV-LTCITFDFS 143 (153)
Q Consensus 106 ~~~~~ip~~~P~g~y~v~~~l~d~------~~~~~-i~C~~~~v~ 143 (153)
++++.||+.+|+|.|-+|.|+.-= .+.|- +.|+++.|+
T Consensus 133 ~~~~~iP~~l~~G~YllR~E~Ialh~a~~~g~~qfY~~Caqi~Vt 177 (223)
T 4eir_A 133 RHSIKIPECIAPGQYLLRAEMIALHAASNYPGAQFYMECAQLNVV 177 (223)
T ss_dssp EEEEECCTTSCCEEEEEEEEEEECTTCSSSSCCEEEEEEEEEEEE
T ss_pred eEEEECCCCCCCCceEEEEeeeeccccccCCCCcccccceEEEEe
Confidence 567799999999999999987662 23332 689999886
No 22
>1pfs_A PF3 SSDBP, PF3 single-stranded DNA binding protein; viral, bacteriophage PF3; NMR {Pseudomonas phage PF3} SCOP: b.40.4.7
Probab=75.55 E-value=10 Score=23.53 Aligned_cols=35 Identities=11% Similarity=0.256 Sum_probs=24.7
Q ss_pred eEEEEEEEeCCCCCCeEEEEEEEEEeCCCceEEEE
Q 031744 103 FVVAHSQVLPGFTPPGTYSLKMKMYDATKKQVLTC 137 (153)
Q Consensus 103 ~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~~i~C 137 (153)
|-...++.+...+|+|+|..-++..-.+|...+.|
T Consensus 36 yP~~~~Fyaeev~paG~Ye~d~~~~V~dgRlef~~ 70 (78)
T 1pfs_A 36 HPLQCQFFVESVIPAGSYQVPYRINVNNGRPELAF 70 (78)
T ss_dssp SCEEEEEECSSCCCSEEEEEEEEEEEETTEEEEEE
T ss_pred CcceEeeeeccCCCCCceecceEeeecCCcEEEEe
Confidence 44455666778889999999888777777542444
No 23
>4eis_A Polysaccharide monooxygenase-3; GH61, PMO, cellulase, biofuels, CBM33, copper monooxygenase, peroxide, superoxide, CBP21, beta-sandwich fold; HET: HIC DAH NAG; 1.37A {Neurospora crassa} PDB: 4eis_B*
Probab=75.11 E-value=12 Score=28.23 Aligned_cols=38 Identities=16% Similarity=0.341 Sum_probs=29.4
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeC------CCceE-EEEEEEEEE
Q 031744 106 AHSQVLPGFTPPGTYSLKMKMYDA------TKKQV-LTCITFDFS 143 (153)
Q Consensus 106 ~~~~~ip~~~P~g~y~v~~~l~d~------~~~~~-i~C~~~~v~ 143 (153)
+.++.||+.+|+|.|-+|.|+.-= .|.|- +.|+++.|+
T Consensus 136 ~~~~~IP~~l~~G~YllR~E~IALH~a~~~ggaQfY~~Caqi~Vt 180 (225)
T 4eis_A 136 NYEYAIPSCLKPGYYLVRHEIIALHSAYSYPGAQFYPGCHQLQVT 180 (225)
T ss_dssp EEEEECCTTBCSEEEEEEEEEEECTTCSSSSCCEEEEEEEEEEEE
T ss_pred ceeEeccCCCCCcceEEEEeeccccccccCCCCcccccCeEEEEe
Confidence 567889999999999999986542 22332 689999886
No 24
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=71.62 E-value=4.5 Score=27.53 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=30.7
Q ss_pred cCCC-CCCCCCCCCCe-eEEEEEEEeCCCCCCeEEEEEEEE
Q 031744 88 HDLC-DETSCPVSTGD-FVVAHSQVLPGFTPPGTYSLKMKM 126 (153)
Q Consensus 88 ~d~C-~~~~CPl~~G~-~~~~~~~~ip~~~P~g~y~v~~~l 126 (153)
-+.| ...+|++..|+ +++++++.-+...-.++..+.+++
T Consensus 18 V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~ 58 (129)
T 1xwv_A 18 VDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASL 58 (129)
T ss_dssp ETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEE
T ss_pred ECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEE
Confidence 3688 78899999996 688888776666667777777765
No 25
>3zud_A GH61 isozyme A; hydrolase, degradation of recalcitrant biomass; HET: HIC NAG TAM; 1.25A {Thermoascus aurantiacus} PDB: 2yet_A*
Probab=71.28 E-value=13 Score=28.05 Aligned_cols=38 Identities=21% Similarity=0.461 Sum_probs=29.4
Q ss_pred EEEEEeCCCCCCeEEEEEEEEEeCC------CceE-EEEEEEEEE
Q 031744 106 AHSQVLPGFTPPGTYSLKMKMYDAT------KKQV-LTCITFDFS 143 (153)
Q Consensus 106 ~~~~~ip~~~P~g~y~v~~~l~d~~------~~~~-i~C~~~~v~ 143 (153)
+.++.||+.+|+|.|-+|.|+.-=. +.|- +.|+++.|+
T Consensus 140 ~~~~~IP~~l~~G~YllR~E~IALH~a~~~ggaQfY~~Caqi~Vt 184 (228)
T 3zud_A 140 SWTVTIPTTIAPGNYVLRHEIIALHSAQNQDGAQNYPQCINLQVT 184 (228)
T ss_dssp EEEEECCSSBCCEEEEEEEEEEECTTTTSTTCCEEEEEEEEEEEC
T ss_pred ccceeccCCCCCCceEEEeeeccccccccCCCCcccccceEEEEe
Confidence 5778999999999999999966522 2332 689998875
No 26
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=70.61 E-value=4.6 Score=27.48 Aligned_cols=39 Identities=10% Similarity=0.189 Sum_probs=30.5
Q ss_pred cCCCCCCCCCCCCCe-eEEEEEEEeCCCCCCeEEEEEEEE
Q 031744 88 HDLCDETSCPVSTGD-FVVAHSQVLPGFTPPGTYSLKMKM 126 (153)
Q Consensus 88 ~d~C~~~~CPl~~G~-~~~~~~~~ip~~~P~g~y~v~~~l 126 (153)
-+.|...+|++..|+ +++++.+.-+...-.++..+.+++
T Consensus 20 V~~C~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~ 59 (130)
T 1nep_A 20 VSPCPTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIV 59 (130)
T ss_dssp EESCSSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEE
T ss_pred ECCCCCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEE
Confidence 367888899999996 688888877777777777776664
No 27
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=62.37 E-value=6 Score=26.98 Aligned_cols=81 Identities=12% Similarity=0.013 Sum_probs=51.2
Q ss_pred EEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEce-----EEEcccCcCCCCCCCCCCCCCe-eEEEEEEEeCCCC
Q 031744 42 VDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFG-----WHIHSETHDLCDETSCPVSTGD-FVVAHSQVLPGFT 115 (153)
Q Consensus 42 v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~-----~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~~ip~~~ 115 (153)
++.+|-.+..|..++++++-.-.-....+...|.+++++ ..+-.. . -=+|.+|. -+.++++.++...
T Consensus 5 is~sP~~p~~g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~vgt~--t-----v~~LaaG~s~t~~v~~~~~~~~ 77 (122)
T 2kut_A 5 ITLSKETPFEGEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRD--T-----ISRIPVGGTGLARVQWKATRKL 77 (122)
T ss_dssp EECCTTSCCTTCEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCCBCC--C-----CSCBCTTCEEECCEEEECCCCC
T ss_pred eecCCCCCCCCCeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEEeeE--E-----ccccCCCCeEEEEEEEecCCcc
Confidence 456788889999999998766655554454556665555 111110 1 12578896 4666777777431
Q ss_pred ----CCeEEEEEEEEEeC
Q 031744 116 ----PPGTYSLKMKMYDA 129 (153)
Q Consensus 116 ----P~g~y~v~~~l~d~ 129 (153)
-.|.|++++.+-++
T Consensus 78 ~~~a~~Gsy~v~AvVD~~ 95 (122)
T 2kut_A 78 AGRAANPGVPVYAVVDPD 95 (122)
T ss_dssp SSCCSCCCCCCCEEECCT
T ss_pred cccccCceEEEEEEEcCC
Confidence 13999999876554
No 28
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=58.93 E-value=14 Score=23.44 Aligned_cols=22 Identities=18% Similarity=0.163 Sum_probs=18.6
Q ss_pred EEEEEEeCCCCCCeEEEEEEEE
Q 031744 105 VAHSQVLPGFTPPGTYSLKMKM 126 (153)
Q Consensus 105 ~~~~~~ip~~~P~g~y~v~~~l 126 (153)
+..++.+|...+.|.|++++..
T Consensus 63 ~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 63 KQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EEEEEECCSSCCCEEEEEEEEC
T ss_pred EEEEEECCCCCCCeeEEEEEEE
Confidence 3567889999999999999865
No 29
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=57.93 E-value=14 Score=25.05 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=41.3
Q ss_pred CCceEEEEEEEEece------eecCc-EEEEEEEE-ceEEEcccCcCCCCC---CCCCCCCCe-eEEEEEEEeCCCCCCe
Q 031744 51 RGREATFSISATTDK------AISGG-KLVIDVSY-FGWHIHSETHDLCDE---TSCPVSTGD-FVVAHSQVLPGFTPPG 118 (153)
Q Consensus 51 ~G~~~~i~~~~~~~~------~i~~~-~~~v~~~~-~~~~~~~~~~d~C~~---~~CPl~~G~-~~~~~~~~ip~~~P~g 118 (153)
.|+.+.+.++-+... +..+| ..++.+.- .|-.+-.-+.+-|-- ..=-+.+|+ .+|+..++ ...++|
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~--~~~~pG 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWK--EVPEPG 93 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEES--SCCCSE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeC--CCCCCc
Confidence 556666655543222 12233 23444432 233333334444542 012257886 46666654 556799
Q ss_pred EEEEEEEEEeCC
Q 031744 119 TYSLKMKMYDAT 130 (153)
Q Consensus 119 ~y~v~~~l~d~~ 130 (153)
.|++++.+..+.
T Consensus 94 ~Ytl~a~l~~~~ 105 (120)
T 3isy_A 94 TYEVKVTFKGRA 105 (120)
T ss_dssp EEEEEEEECCEE
T ss_pred cEEEEEEEEeee
Confidence 999999987643
No 30
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=56.85 E-value=8.2 Score=26.45 Aligned_cols=20 Identities=15% Similarity=0.285 Sum_probs=14.4
Q ss_pred CCCCeEEEEEEEEEeCCCce
Q 031744 114 FTPPGTYSLKMKMYDATKKQ 133 (153)
Q Consensus 114 ~~P~g~y~v~~~l~d~~~~~ 133 (153)
..|+|.|+++++..|.+|+.
T Consensus 79 ~~~~G~Y~~~v~a~d~~g~~ 98 (138)
T 3c12_A 79 RMAAGKYGITATQTDTAGAK 98 (138)
T ss_dssp BCCSEEEEEEEEEEETTCCE
T ss_pred CCCCceEEEEEEEEECCCCE
Confidence 36778888888888766653
No 31
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=53.19 E-value=47 Score=22.06 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=52.1
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCCCCCCCCCee-EEEEEEEeCCC
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDETSCPVSTGDF-VVAHSQVLPGF 114 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~-~~~~~~~ip~~ 114 (153)
++.+.++ +|-.+..|+..+|+++.+-..+...+...+.++.+|-.+-..... . +.+|.- +..+++. +.
T Consensus 4 DL~vt~i--tP~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~g~~v~t~~v~---~----LaaG~s~tv~~~w~--~~ 72 (114)
T 2l0d_A 4 DLVPVSL--TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIVVDTQTVT---S----LESENSTNVDFHWT--LD 72 (114)
T ss_dssp CEEEEEE--ECSEECTTSEEEEEEEEEECSSSCBCCEEEEEEETTEEEEEEEES---C----BCBTCEEEEEEEEE--CC
T ss_pred CcEEEec--cCCCcCCCCeEEEEEEEEECCCCCCCCEEEEEEECCEEEcceecc---c----ccCCCEEEEEEEEe--ec
Confidence 4778877 576688999999999877766665666778787777543222111 1 567753 4555432 11
Q ss_pred CCCeEEEEEEEEE
Q 031744 115 TPPGTYSLKMKMY 127 (153)
Q Consensus 115 ~P~g~y~v~~~l~ 127 (153)
...|.|++++..-
T Consensus 73 ~~~G~ytl~a~VD 85 (114)
T 2l0d_A 73 GTANSYTLTVNVD 85 (114)
T ss_dssp CSCSEEEEEEEEC
T ss_pred CcCceEEEEEEEC
Confidence 1368999998653
No 32
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=51.78 E-value=29 Score=28.95 Aligned_cols=15 Identities=27% Similarity=0.716 Sum_probs=11.6
Q ss_pred CCCCCCCCe-eEEEEE
Q 031744 94 TSCPVSTGD-FVVAHS 108 (153)
Q Consensus 94 ~~CPl~~G~-~~~~~~ 108 (153)
+.||+.+|+ |+|.+.
T Consensus 104 tq~~I~PG~s~~Y~f~ 119 (521)
T 1v10_A 104 NQCPIIPNESFVYDFV 119 (521)
T ss_dssp TBCCBCTTEEEEEEEE
T ss_pred eeCCcCCCCeEEEEEe
Confidence 479999996 666655
No 33
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=51.57 E-value=13 Score=30.92 Aligned_cols=16 Identities=31% Similarity=0.746 Sum_probs=11.8
Q ss_pred CCCCCCCCe-eEEEEEE
Q 031744 94 TSCPVSTGD-FVVAHSQ 109 (153)
Q Consensus 94 ~~CPl~~G~-~~~~~~~ 109 (153)
+.||+.+|+ |+|.+..
T Consensus 84 tq~pI~PG~sftY~f~~ 100 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNV 100 (495)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCCCCCCeEEEEEEe
Confidence 479999996 6665553
No 34
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=50.60 E-value=14 Score=30.83 Aligned_cols=16 Identities=31% Similarity=0.795 Sum_probs=11.8
Q ss_pred CCCCCCCCe-eEEEEEE
Q 031744 94 TSCPVSTGD-FVVAHSQ 109 (153)
Q Consensus 94 ~~CPl~~G~-~~~~~~~ 109 (153)
+.||+.+|+ |+|.+..
T Consensus 83 tq~pI~PG~s~tY~f~~ 99 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQV 99 (499)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCCCCCCeEEEEEEc
Confidence 479999996 6665554
No 35
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=49.77 E-value=1e+02 Score=24.99 Aligned_cols=30 Identities=10% Similarity=0.033 Sum_probs=24.5
Q ss_pred CCCeeEEEEEEEeCCCCCC----------------eEEEEEEEEEe
Q 031744 99 STGDFVVAHSQVLPGFTPP----------------GTYSLKMKMYD 128 (153)
Q Consensus 99 ~~G~~~~~~~~~ip~~~P~----------------g~y~v~~~l~d 128 (153)
++|.+.|.+++.||...|+ +.|.|++.+.+
T Consensus 104 ~~G~h~fPFsFqLP~~lPsSf~lqp~~~~eGk~g~VrY~VKa~i~~ 149 (392)
T 1suj_A 104 KLGAHAYPFCFKMGTNLPCSVTLQPGPDDTGKSCGVDFEVKAFCAE 149 (392)
T ss_dssp HHCSSEEEEEECCCSSCCCCEEECCCTTCCSCCEEEEEEEEEEEES
T ss_pred cccCeeEeEEeeCCCCCCCeEEeccCCccCCCceeEEEEEEEEEcC
Confidence 5799999999999987775 57888888854
No 36
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=49.35 E-value=39 Score=28.83 Aligned_cols=16 Identities=31% Similarity=0.760 Sum_probs=12.4
Q ss_pred CCCCCCCCe-eEEEEEE
Q 031744 94 TSCPVSTGD-FVVAHSQ 109 (153)
Q Consensus 94 ~~CPl~~G~-~~~~~~~ 109 (153)
+.||+.+|+ |+|++.+
T Consensus 143 Tq~pI~PG~sftY~f~~ 159 (580)
T 3sqr_A 143 TQCPIAPGDTLTYKFQV 159 (580)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCCCCCCeEEEEEEC
Confidence 479999996 6777664
No 37
>3m7o_A Lymphocyte antigen 86; beta sheet, glycoprotein, immunity, inflammatory response, I immunity, secreted, immune system; HET: NAG L9R NDG; 1.65A {Mus musculus} PDB: 3t6q_C* 3b2d_C* 3rg1_C*
Probab=49.25 E-value=22 Score=25.47 Aligned_cols=30 Identities=7% Similarity=0.163 Sum_probs=24.5
Q ss_pred CCCCCCceEEEEEEEEece-eecCcEEEEEE
Q 031744 47 YPVARGREATFSISATTDK-AISGGKLVIDV 76 (153)
Q Consensus 47 c~~~~G~~~~i~~~~~~~~-~i~~~~~~v~~ 76 (153)
|+.++|+.+.....+..+. ++..|+..+.+
T Consensus 112 Cp~~KGE~v~~~~~v~~p~~e~P~G~Y~v~a 142 (162)
T 3m7o_A 112 CGRRKGEQIYYAGPVNNPGLDVPQGEYQLLL 142 (162)
T ss_dssp TTCCTTCEEEEEEECCCCEEECCSEEEEEEE
T ss_pred CCcCCCeEEEEEEEeecCceecCCCcEEEEE
Confidence 9999999999988888887 68889754433
No 38
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=47.32 E-value=39 Score=28.29 Aligned_cols=16 Identities=19% Similarity=0.677 Sum_probs=12.4
Q ss_pred CCCCCCCCe-eEEEEEE
Q 031744 94 TSCPVSTGD-FVVAHSQ 109 (153)
Q Consensus 94 ~~CPl~~G~-~~~~~~~ 109 (153)
+.||+.+|+ |+|.+..
T Consensus 79 tq~~I~PG~s~tY~f~~ 95 (552)
T 1aoz_A 79 SQCAINPGETFFYNFTV 95 (552)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCCcCCCCeEEEEEEC
Confidence 479999996 6777664
No 39
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=45.60 E-value=50 Score=20.17 Aligned_cols=18 Identities=28% Similarity=0.521 Sum_probs=15.7
Q ss_pred CCeEEEEEEEEEeCCCce
Q 031744 116 PPGTYSLKMKMYDATKKQ 133 (153)
Q Consensus 116 P~g~y~v~~~l~d~~~~~ 133 (153)
-+|.|+++++..|.+|..
T Consensus 57 ~~G~Y~v~LtVtd~~G~~ 74 (85)
T 2y72_A 57 KAGTYNVTLKVTDDKGAT 74 (85)
T ss_dssp SCEEEEEEEEEEETTSCE
T ss_pred CCeEEEEEEEEEECCCCE
Confidence 479999999999988864
No 40
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.53 E-value=57 Score=20.82 Aligned_cols=30 Identities=20% Similarity=0.271 Sum_probs=22.2
Q ss_pred CeEEEEEEEEEeCCCceEEEEEEEEEEEeecc
Q 031744 117 PGTYSLKMKMYDATKKQVLTCITFDFSIGFAS 148 (153)
Q Consensus 117 ~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~~~ 148 (153)
.|.|+++++.+|.+|.. .=-.+.|.+...+
T Consensus 68 ~G~y~f~LTVtD~~G~s--~s~~v~VtV~~~~ 97 (102)
T 2yrl_A 68 VGTYVFTLTVKDERNLQ--SQSSVNVIVKEES 97 (102)
T ss_dssp SSEEEEEEEEEBTTCCE--EEEEEEEEEECCS
T ss_pred CeEEEEEEEEEeCCCCE--EEeEEEEEEcCCC
Confidence 68999999999998875 3355666665444
No 41
>2xom_A Arabinogalactan endo-1,4-beta-galactosidase; hydrolase, carbohydrate-binding module, glycoside hydrolase, beta-sandwich.; HET: GAL; 0.95A {Thermotoga maritima} PDB: 2xon_A*
Probab=45.24 E-value=55 Score=22.55 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=23.7
Q ss_pred eeEEEEEEEeCCCCCCeEEEEEEEEEeCCCce
Q 031744 102 DFVVAHSQVLPGFTPPGTYSLKMKMYDATKKQ 133 (153)
Q Consensus 102 ~~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~ 133 (153)
.|+.+..+.|. .|.|+|++.+.+....++.
T Consensus 58 ~~~~~~~Qtvt--lp~gtYtlsa~v~~~~~~~ 87 (152)
T 2xom_A 58 SFSFELSQEVE--LPAGVYRVGFWTHGEKGVK 87 (152)
T ss_dssp CEEEEEEEEEE--CCSEEEEEEEEEEESTTCE
T ss_pred CCeeEEEEEEE--eCCCeEEEEEEEEcCCCce
Confidence 36677777784 8999999999998877654
No 42
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=42.69 E-value=41 Score=24.37 Aligned_cols=74 Identities=19% Similarity=0.175 Sum_probs=48.8
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEE-c--ccCcCCCCCCCCCCCCCeeEEEEEEEeC
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHI-H--SETHDLCDETSCPVSTGDFVVAHSQVLP 112 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~-~--~~~~d~C~~~~CPl~~G~~~~~~~~~ip 112 (153)
.++|++|.+..+|-.-...+.++++|..-+.+++. +...+.|-|-.- - ++..|-+. -=|+..|.+.|.++..-|
T Consensus 5 ~V~l~~V~VlnNp~~f~dP~~FeI~fEcle~L~~d-leWkliYVgSa~s~~~DQ~Ldsv~--VGPi~~G~~kFv~~adpP 81 (179)
T 2idc_A 5 IVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHD-LEWKLTYVGSSRSLDHDQELDSIL--VGPVPVGVNKFVFSADPP 81 (179)
T ss_dssp SEEEEEEEEESCSEETTSCEEEEEEEEECSCCSSC-EEEEEEECSCTTCGGGCEEEEEEE--ECSCCSEEEEEEEEECCC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCC-cEEEEEEEcCCCcccCCeEeeEEE--ECCccceeEEEEEEcCCC
Confidence 58999999998888888999999999998887766 333443422100 0 01112222 247889987777766655
No 43
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=42.50 E-value=48 Score=23.96 Aligned_cols=75 Identities=19% Similarity=0.165 Sum_probs=48.9
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEE-ceEEE--cccCcCCCCCCCCCCCCCeeEEEEEEEeC
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSY-FGWHI--HSETHDLCDETSCPVSTGDFVVAHSQVLP 112 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~-~~~~~--~~~~~d~C~~~~CPl~~G~~~~~~~~~ip 112 (153)
.++|+++.+.-+|-.-...+.++++|..-+.+++. +...+.| |.-.- .+...|-+. -=|+..|.+.|.++..-|
T Consensus 9 ~V~l~~V~VlnNp~~f~dP~~FeI~fEcle~L~~d-leWkliYVgSa~s~~~DQ~Ld~v~--VGPi~~G~~kFv~~adpP 85 (175)
T 2hue_A 9 IVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHD-LEWKLTYVGSSRSLDHDQELDSIL--VGPVPVGVNKFVFSADPP 85 (175)
T ss_dssp SEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSC-EEEEEEEESCTTCGGGEEEEEEEE--ECSCCSEEEEEEEEECCC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCC-cEEEEEEEcCCCCccCCeEeeEEE--ECCccceeEEEEEEcCCC
Confidence 69999999998888888899999999998887776 3333333 31100 001112222 247889987777776656
Q ss_pred C
Q 031744 113 G 113 (153)
Q Consensus 113 ~ 113 (153)
.
T Consensus 86 d 86 (175)
T 2hue_A 86 S 86 (175)
T ss_dssp C
T ss_pred C
Confidence 3
No 44
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B
Probab=42.37 E-value=53 Score=23.86 Aligned_cols=103 Identities=16% Similarity=0.164 Sum_probs=61.2
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEeceeecCc-EEEEEEEEceEEE--cccCcCCCCCCCCCCCCCeeEEEEEEEeC
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATTDKAISGG-KLVIDVSYFGWHI--HSETHDLCDETSCPVSTGDFVVAHSQVLP 112 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~--~~~~~d~C~~~~CPl~~G~~~~~~~~~ip 112 (153)
.++|++|.+.-+|-.-...+.++++|..-+.+++. ..++ ++.|.-.- .++..|-+. -=|+..|.+.|.++..-|
T Consensus 28 ~V~i~~V~VlnNp~~F~dP~~FeItfEcle~L~~dleWkl-iYVGSa~s~~~DQ~Ldsv~--VGPi~~G~~kFvfeadpP 104 (182)
T 2i32_A 28 KVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKI-IYVGSAESEEYDQVLDSVL--VGPVPAGRHMFVFQADAP 104 (182)
T ss_dssp SEEEEEEEECSCSEETTSCEEEEEEEEESSCCSSCEEEEE-EEESCSSCGGGEEEEEEEE--ECCCCSEEEEEEEEECCC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEccccCCCcEEEE-EEEcCCCCccCCeEeeEEE--ECCccceEEEEEEEeCCC
Confidence 69999999988887788889999999998887776 3333 22332100 011112222 247889987777776666
Q ss_pred --CCCCC----eEEEEEEEEEeCCCceEEEEEEEEEE
Q 031744 113 --GFTPP----GTYSLKMKMYDATKKQVLTCITFDFS 143 (153)
Q Consensus 113 --~~~P~----g~y~v~~~l~d~~~~~~i~C~~~~v~ 143 (153)
..+|. |--.+-++..- .|++ +.=+..=+.
T Consensus 105 d~~kIP~~dilGVTviLlt~sY-~~qE-FiRVGYYVn 139 (182)
T 2i32_A 105 NPGLIPDADAVGVTVVLITCTY-RGQE-FIRVGYYVN 139 (182)
T ss_dssp CGGGSCHHHHSEEEEEEEEEEE-TTEE-EEEEEEEEE
T ss_pred CcccCChhhcceeEEEEEEEEE-CCeE-EEEEEEEEe
Confidence 33663 43334444443 3455 554444443
No 45
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=41.01 E-value=69 Score=20.51 Aligned_cols=57 Identities=19% Similarity=0.242 Sum_probs=34.8
Q ss_pred EEEEEEeceeecCc-EEEEEEEEceEEEcccCcCCCCCCCCCCCCCeeEEEEEEEeCCCCCCeEEEEEEEEEeCCCce
Q 031744 57 FSISATTDKAISGG-KLVIDVSYFGWHIHSETHDLCDETSCPVSTGDFVVAHSQVLPGFTPPGTYSLKMKMYDATKKQ 133 (153)
Q Consensus 57 i~~~~~~~~~i~~~-~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~ 133 (153)
+.+.+.+... .| ..+|.++.+|-.+-.. ....|+|..+. . .|.|+++++.+|..|..
T Consensus 19 v~i~a~A~D~--dg~V~kVef~vdg~~vg~d------------t~apy~~~w~~--~----~G~htl~a~AtD~~G~~ 76 (98)
T 3pe9_A 19 LKITATASDS--DGKISRVDFLVDGEVIGSD------------REAPYEYEWKA--V----EGNHEISVIAYDDDDAA 76 (98)
T ss_dssp EEEEEEECCS--SSCEEEEEEEETTEEEEEE------------CSSSEEEEEEC--C----SEEEEEEEEEEETTCCB
T ss_pred EEEEEEEEeC--CCCEEEEEEEECCEEeccc------------ccCCEEEEEEc--C----CccEEEEEEEEECCCCE
Confidence 4444444432 34 4578888887544321 12235554432 1 69999999999999874
No 46
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=40.70 E-value=37 Score=24.06 Aligned_cols=78 Identities=21% Similarity=0.212 Sum_probs=51.3
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccC----cCCCCCCCCCCCCCeeEEEEEEEe
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSET----HDLCDETSCPVSTGDFVVAHSQVL 111 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~----~d~C~~~~CPl~~G~~~~~~~~~i 111 (153)
.++|+++.+..+|-.-...+.++++|..-+.+++. +...+.|-|-+ -+.. .|-+. -=|+..|.+.|.++..-
T Consensus 4 ~V~i~~V~vl~np~~f~~p~~feI~fEc~e~L~~d-lewkliYVgSa-~s~~~DQ~Ld~v~--vGPi~~G~~kFv~~adp 79 (155)
T 1roc_A 4 IVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHD-LEWKLTYVGSS-RSLDHDQELDSIL--VGPVPVGVNKFVFSADP 79 (155)
T ss_dssp SEEEEEEEECSCSEETTSCEEEEEEEEECSCCSSC-EEEEEEECCCT-TSSCTTEEEEEEE--ECSCCSEEEEEEEEECC
T ss_pred EEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCC-cEEEEEEEeCC-CcccCceEeeEEE--eccccceeEEEEEEcCC
Confidence 58999999998888888999999999999887776 43444442211 0111 11111 35788998777776666
Q ss_pred C--CCCCC
Q 031744 112 P--GFTPP 117 (153)
Q Consensus 112 p--~~~P~ 117 (153)
| ..+|.
T Consensus 80 Pd~~~Ip~ 87 (155)
T 1roc_A 80 PSAELIPA 87 (155)
T ss_dssp CCGGGCCT
T ss_pred CCcccCCh
Confidence 6 33565
No 47
>4f27_A Clumping factor B; DEV-IGG fold, protein-peptide complex, fibronogen, cell SURF adhesion-blood clotting complex; 1.92A {Staphylococcus aureus} PDB: 4f20_A 4f24_A 4f1z_A 3au0_A 3at0_A 3asw_A
Probab=39.51 E-value=59 Score=25.24 Aligned_cols=41 Identities=5% Similarity=0.082 Sum_probs=31.2
Q ss_pred ccEEEEEEEEecCC--CCCCceEEEEEEEEeceeecCc-EEEEE
Q 031744 35 YDVKVHGVDISPYP--VARGREATFSISATTDKAISGG-KLVID 75 (153)
Q Consensus 35 ~~~~i~~v~i~Pc~--~~~G~~~~i~~~~~~~~~i~~~-~~~v~ 75 (153)
..+++++..++.-. +..|+.+.+++.|.++..+..| +..+.
T Consensus 38 ~kvt~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~vk~GD~fti~ 81 (363)
T 4f27_A 38 DKVTASDFKLEKTAFDPNQSGNTFMAANFKVTGQVKSGDYFTAK 81 (363)
T ss_dssp GGEEEEEEEESCSEECTTBTCCEEEEEEEEESSCCCTTCEEEEE
T ss_pred eeEEEEecccccccccCCCCceEEEEEEEEcCCCCCCCCEEEEE
Confidence 35888888876643 5679999999999998888888 54443
No 48
>2le2_A P56; UDG inhibition, DNA mimicry, hydrolas inhibitor; NMR {Bacillus phage PHI29}
Probab=38.97 E-value=20 Score=20.38 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=13.9
Q ss_pred eEEEEEEEEEeCCCce
Q 031744 118 GTYSLKMKMYDATKKQ 133 (153)
Q Consensus 118 g~y~v~~~l~d~~~~~ 133 (153)
.+|++.|-+.|++|++
T Consensus 8 dsy~~t~ll~dddg~q 23 (56)
T 2le2_A 8 DSYDVTMLLQDDDGKQ 23 (56)
T ss_dssp SSEEEEEEEECTTSCE
T ss_pred cceeEEEEEEcCCCce
Confidence 4699999999999876
No 49
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=37.14 E-value=84 Score=27.32 Aligned_cols=89 Identities=10% Similarity=0.123 Sum_probs=53.5
Q ss_pred CCCceEEEEEEEEece-eecCcEEEEEEEEceEEEcccCcCCCCCCCCCCCCCe-eEE-EEEEEeCCC--CCCeEEEEEE
Q 031744 50 ARGREATFSISATTDK-AISGGKLVIDVSYFGWHIHSETHDLCDETSCPVSTGD-FVV-AHSQVLPGF--TPPGTYSLKM 124 (153)
Q Consensus 50 ~~G~~~~i~~~~~~~~-~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~-~~~~~ip~~--~P~g~y~v~~ 124 (153)
.+|+.+++++++.-.. ...+|++.++++..+-++-...... . +.+|+ ++. ..++.+|.. ....-|-+++
T Consensus 19 ~PGe~V~l~~~l~n~t~~~~~gtv~~~v~hl~~~V~~~~~~~--~----l~~G~s~~~~~~~~~~P~~df~n~~GYlvev 92 (643)
T 3vmn_A 19 QAGEAVHLNLTLNNTTSLAQNITATAEVYSLENKLKTLQYTK--Y----LLPNESYTTQKGEFVIPANSLANNRGYLLKV 92 (643)
T ss_dssp CTTSCEEEECEEECCSSSCEEEEEEEEEEETTEEEEEEEEEE--E----ECTTCEEECCTTSEEECTTSSCSSEEEEEEE
T ss_pred CCCCeEEEEEEEecccCccceeEEEEEEEecccccccceEEE--E----ecCCCcceeeeeeeecCccccccCceEEEEE
Confidence 4689999988765422 2345677888877766554432211 2 35564 333 114457753 2335699999
Q ss_pred EEEeCCCceEEEEEEEEEEEe
Q 031744 125 KMYDATKKQVLTCITFDFSIG 145 (153)
Q Consensus 125 ~l~d~~~~~~i~C~~~~v~i~ 145 (153)
...|++|++ +.=...-+++-
T Consensus 93 ~~~d~~g~~-~~~~t~AIDVS 112 (643)
T 3vmn_A 93 NISDSQNNI-LEQGNRAIAVE 112 (643)
T ss_dssp EEECTTCCE-EEEEEEEEEEC
T ss_pred EEEcCCCcE-eeeeeEEEEec
Confidence 999988886 55555555544
No 50
>2io5_A ASF1A protein; chaperone, chaperone-structural protein complex; 2.70A {Homo sapiens} SCOP: b.1.22.1
Probab=37.10 E-value=61 Score=23.38 Aligned_cols=103 Identities=16% Similarity=0.164 Sum_probs=60.1
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEeceeecCc-EEEEEEEEceEEE--cccCcCCCCCCCCCCCCCeeEEEEEEEeC
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATTDKAISGG-KLVIDVSYFGWHI--HSETHDLCDETSCPVSTGDFVVAHSQVLP 112 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~~--~~~~~d~C~~~~CPl~~G~~~~~~~~~ip 112 (153)
.++|+++.+.-+|-.-...+.++++|...+.+++. ..++ ++.|.-.- .++..|-+. -=|+..|.+.|.++..-|
T Consensus 6 ~V~l~~V~vlnNp~~f~~P~~FeI~fEc~e~L~~dleWkl-iYVgSa~s~~~DQ~Ld~v~--VGPi~~G~~kFv~~adpP 82 (175)
T 2io5_A 6 KVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKI-IYVGSAESEEYDQVLDSVL--VGPVPAGRHMFVFQADAP 82 (175)
T ss_dssp CEEEEEEEECSCSEETTSCEEEEEEEEESSCCCSCEEEEE-EEECCTTCGGGEEEEEEEE--ECSCCSEEEEEEEEECCC
T ss_pred EEEEEEEEEeCCccccCCCeEEEEEEEeccccCCCcEEEE-EEEcCCCCccCCeEeeEEE--ECCccceEEEEEEEeCCC
Confidence 58999999988887788889999999998887766 3333 22231100 001112222 247889987777776666
Q ss_pred --CCCCC----eEEEEEEEEEeCCCceEEEEEEEEEE
Q 031744 113 --GFTPP----GTYSLKMKMYDATKKQVLTCITFDFS 143 (153)
Q Consensus 113 --~~~P~----g~y~v~~~l~d~~~~~~i~C~~~~v~ 143 (153)
..+|. |--.+-++..- .|++ +.=+..-+.
T Consensus 83 d~~~IP~~dilGvTvillt~sY-~~qE-FiRVGYYVn 117 (175)
T 2io5_A 83 NPGLIPDADAVGVTVVLITCTY-RGQE-FIRVGYYVN 117 (175)
T ss_dssp CGGGSCHHHHSEEEEEEEEEEE-TTEE-EEEEEEEEE
T ss_pred ChhhCChhhcceeEEEEEEEEE-CCcE-EEEEEEEEe
Confidence 33663 43333444433 3455 554444333
No 51
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=36.86 E-value=74 Score=28.08 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=47.9
Q ss_pred CCCCceEEEEEEEEeceeecC--cEEEEEEEEce---------EEEc--ccCcCCCCCCCCCCCC-CeeEEEEEEEeCCC
Q 031744 49 VARGREATFSISATTDKAISG--GKLVIDVSYFG---------WHIH--SETHDLCDETSCPVST-GDFVVAHSQVLPGF 114 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~--~~~~v~~~~~~---------~~~~--~~~~d~C~~~~CPl~~-G~~~~~~~~~ip~~ 114 (153)
++||+.++|.+.|. +..+. ..+.+.+..|. ..++ ....+.+=.. =+.. .....+.++..|..
T Consensus 76 VRRGQ~F~i~l~f~--r~~~~~~d~l~l~~~tGp~Ps~~~gT~~~~~l~~~~~~~~W~A--~~~~~~~~~~tvsv~spa~ 151 (731)
T 1ex0_A 76 VRRGQSFYVQIDFS--RPYDPRRDLFRVEYVIGRYPQENKGTYIPVPIVSELQSGKWGA--KIVMREDRSVRLSIQSSPK 151 (731)
T ss_dssp EETTSEEEEEEEES--SCCCTTTCCEEEEEECBSSCCGGGTSEEEECEESSCCTTSCEE--EEEEEETTEEEEEEECCTT
T ss_pred EcCCCcEEEEEEeC--CCCCCCCcEEEEEEEeCCCCCccCCcEEEEEeccCCCCCceEE--EEEecCCCEEEEEEecCCC
Confidence 88999999999874 44332 35677776662 1222 1111111110 0011 11367888999999
Q ss_pred CCCeEEEEEEEEEeCC
Q 031744 115 TPPGTYSLKMKMYDAT 130 (153)
Q Consensus 115 ~P~g~y~v~~~l~d~~ 130 (153)
.|-|+|++.++.....
T Consensus 152 A~VG~Y~L~v~~~~~~ 167 (731)
T 1ex0_A 152 CIVGKFRMYVAVWTPY 167 (731)
T ss_dssp CCCEEEEEEEEEEETT
T ss_pred CeEEEEEEEEEEEecC
Confidence 9999999999987754
No 52
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=36.85 E-value=1.1e+02 Score=21.69 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=30.5
Q ss_pred EEEEEEEEceEEEcccCcCCCCCCCCCCCCCeeEEEEEEEeCCCCCCeEEEEEEEEEeCCCce
Q 031744 71 KLVIDVSYFGWHIHSETHDLCDETSCPVSTGDFVVAHSQVLPGFTPPGTYSLKMKMYDATKKQ 133 (153)
Q Consensus 71 ~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P~g~y~v~~~l~d~~~~~ 133 (153)
..++.++.+|-.+-.. ..+.|+|+... +.|.|+++++.+|..|..
T Consensus 124 V~~Ve~~~dg~~v~t~------------t~~~y~~~~~~------~~G~~tl~a~A~D~aGn~ 168 (190)
T 3pdd_A 124 ISRVDFLVDGEVIGSD------------REAPYEYEWKA------VEGNHEISVIAYDDDDAA 168 (190)
T ss_dssp EEEEEEEETTEEEEEE------------CSSSEEEEEEC------CSEEEEEEEEEEETTCCB
T ss_pred EEEEEEEECCEEEecc------------cCCCEEEEEec------CCeeEEEEEEEEECCCCE
Confidence 3467777777544221 12446555543 789999999999999875
No 53
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=36.27 E-value=18 Score=27.97 Aligned_cols=55 Identities=15% Similarity=0.217 Sum_probs=30.4
Q ss_pred CCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCCCCCCCCCe-eEEEEEEEeC
Q 031744 50 ARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDETSCPVSTGD-FVVAHSQVLP 112 (153)
Q Consensus 50 ~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~~ip 112 (153)
+.|..+.|+++=.+++ . .++.+-|+.++. ..|.=....||+.+|+ |+|.+++..|
T Consensus 47 ~~Gd~v~v~~~N~l~~----~---~siH~HG~~~~~-~~dG~~~~~~~i~PG~~~~Y~~~~~~P 102 (313)
T 3tas_A 47 NEGDTLHIEFENTMDV----P---VSLHVHGLDYEI-SSDGTKQSRSDVEPGGTRTYTWRTHVP 102 (313)
T ss_dssp ETTCEEEEEEEECSSS----C---BCCEESSSBCCG-GGSCSTTTTCCBCTTCEEEEEEBCCCC
T ss_pred ECCCEEEEEEEECCCC----C---ccEeecCCcCCc-cCCCCccccCCcCCCCEEEEEEEeccC
Confidence 3466666665433322 1 123444544332 2343334589999996 7888877665
No 54
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=35.22 E-value=30 Score=27.01 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=12.1
Q ss_pred CCCCCCCCe-eEEEEEE
Q 031744 94 TSCPVSTGD-FVVAHSQ 109 (153)
Q Consensus 94 ~~CPl~~G~-~~~~~~~ 109 (153)
..||+.+|+ |+|.+..
T Consensus 79 tq~~I~PG~~~~y~f~~ 95 (339)
T 2zwn_A 79 TQQPIEAGDSYTYKFKA 95 (339)
T ss_dssp TBCCBCTTCEEEEEEEC
T ss_pred ccCccCCCCeEEEEEEC
Confidence 369999996 6776664
No 55
>3mtx_A Protein MD-1; LY86, RP105 associated protein, immune system; HET: PGT PGE; 2.00A {Gallus gallus} PDB: 3mu3_A*
Probab=32.19 E-value=86 Score=22.04 Aligned_cols=28 Identities=14% Similarity=0.113 Sum_probs=23.0
Q ss_pred CCCCCCceEEEEEEEEece-eecCcEEEE
Q 031744 47 YPVARGREATFSISATTDK-AISGGKLVI 74 (153)
Q Consensus 47 c~~~~G~~~~i~~~~~~~~-~i~~~~~~v 74 (153)
|+..+|+.+..+..+..+. ++..|+..+
T Consensus 91 C~~~KGE~i~~~~~v~~pg~~~p~G~Y~v 119 (151)
T 3mtx_A 91 CGKKKGEHLYYEGPITLGIKEIPQRDYTI 119 (151)
T ss_dssp TTCCTTCEEEEEEEEECCCSSCCCEEEEE
T ss_pred cCccCCeeEEEEEEeecCceecCCCcEEE
Confidence 8899999999888888877 788886543
No 56
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=31.54 E-value=1.1e+02 Score=19.89 Aligned_cols=29 Identities=17% Similarity=0.304 Sum_probs=21.5
Q ss_pred CeEEEEEEEEEeCCCceEEEEEEEEEEEeec
Q 031744 117 PGTYSLKMKMYDATKKQVLTCITFDFSIGFA 147 (153)
Q Consensus 117 ~g~y~v~~~l~d~~~~~~i~C~~~~v~i~~~ 147 (153)
+|.|.+..+..|.+|.. +=....+.+...
T Consensus 58 ~G~Y~VtY~VtDs~Gn~--~t~trtVtV~~~ 86 (103)
T 2kpn_A 58 AGTYVLTYTVTDSKGHE--VTAKQTVTVKVR 86 (103)
T ss_dssp CEEEEEEEEEECTTSCE--EEEEEEEEEECS
T ss_pred ceEEEEEEEEEcCCCCE--EEEEEEEEEeCC
Confidence 68999999999988876 445666666543
No 57
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=30.68 E-value=2.7e+02 Score=24.32 Aligned_cols=80 Identities=15% Similarity=0.195 Sum_probs=47.4
Q ss_pred CCCCceEEEEEEEEeceeecC--cEEEEEEEEce-----------EEEcccCcCCCCCCCCCCCCCeeEEEEEEEeCCCC
Q 031744 49 VARGREATFSISATTDKAISG--GKLVIDVSYFG-----------WHIHSETHDLCDETSCPVSTGDFVVAHSQVLPGFT 115 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~--~~~~v~~~~~~-----------~~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~ 115 (153)
++||+.+.|.+.|. ++..+. ..+.+.+..|. +|+.....+.+=.... ........+.++..|...
T Consensus 33 vRRGQ~F~i~l~f~-~r~~~~~~d~l~l~~~~Gp~Ps~~~gT~~~~~l~~~~~~~~W~a~~-~~~~~~~~~vsv~spa~A 110 (687)
T 2q3z_A 33 VRRGQPFWLTLHFE-GRNYQASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATV-VDQQDCTLSLQLTTPANA 110 (687)
T ss_dssp EETTSCEEEEEEES-SSCCCTTTEEEEEEEEESSSCCTTTTSEEEEEBCSCCCTTSCEEEE-EEECSSEEEEEEECCTTC
T ss_pred EcCCCcEEEEEEec-CCCCCCcccEEEEEEEeCCCCCccCCeEEEEEeccCCCCCceEEEE-EecCCCEEEEEEeCCCCC
Confidence 78999999999872 232222 35677776662 1222111111111000 011113678889999999
Q ss_pred CCeEEEEEEEEEeCC
Q 031744 116 PPGTYSLKMKMYDAT 130 (153)
Q Consensus 116 P~g~y~v~~~l~d~~ 130 (153)
|-|.|++.+......
T Consensus 111 ~VG~y~L~v~~~~~~ 125 (687)
T 2q3z_A 111 PIGLYRLSLEASTGY 125 (687)
T ss_dssp CCEEEEEEEEEEETT
T ss_pred eEEEEEEEEEEEecC
Confidence 999999999987744
No 58
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=30.38 E-value=1.9e+02 Score=25.41 Aligned_cols=79 Identities=13% Similarity=0.090 Sum_probs=48.5
Q ss_pred CCCCceEEEEEEEEeceeecCcEEEEEEEEc---eEEEcccCcCCCCCCCCCCCC-CeeE--EEEEEEeCCCCCCeEEEE
Q 031744 49 VARGREATFSISATTDKAISGGKLVIDVSYF---GWHIHSETHDLCDETSCPVST-GDFV--VAHSQVLPGFTPPGTYSL 122 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~---~~~~~~~~~d~C~~~~CPl~~-G~~~--~~~~~~ip~~~P~g~y~v 122 (153)
++||+.++|.+.|. ...-....+++....| -+|+.......+=.. =+.. .... .+.++..|...|-|+|++
T Consensus 34 VRRGQ~F~i~l~f~-G~~Ps~~~~~~~~~~gT~~~~~l~~~~~~~~W~A--~v~~~~~~~~~~tvsv~spa~A~VG~Y~L 110 (695)
T 1g0d_A 34 VRRGQPFSITLQCS-DSLPPKHHLELVLHLGKRDEVVIKVQKEHGARDK--WWFNQQGAQDEILLTLHSPANAVIGHYRL 110 (695)
T ss_dssp EETTSCEEEEEEES-SCCCTTCEEEEEEEESTTCSEEEEEBSSSCCSSS--CEEEEEECSSEEEEEEECCTTCCCEEEEE
T ss_pred EcCCCcEEEEEEeC-CCCCCccccccccCCCcEEEEEecccCCCCceeE--EEEecCCCeeeEEEEEeCCCCCeEEEEEE
Confidence 78999999999885 2222223344443333 146554433333221 0111 1124 889999999999999999
Q ss_pred EEEEEeCC
Q 031744 123 KMKMYDAT 130 (153)
Q Consensus 123 ~~~l~d~~ 130 (153)
.+......
T Consensus 111 ~v~~~~~~ 118 (695)
T 1g0d_A 111 AVLVMSPD 118 (695)
T ss_dssp EEEEECTT
T ss_pred EEEEEeCC
Confidence 99988754
No 59
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=30.33 E-value=51 Score=22.68 Aligned_cols=44 Identities=30% Similarity=0.587 Sum_probs=24.3
Q ss_pred CCCCCC-CCeeEEEEEEEeCCCCCCe----EEEEEEEEEeCCCceEEEEEE
Q 031744 94 TSCPVS-TGDFVVAHSQVLPGFTPPG----TYSLKMKMYDATKKQVLTCIT 139 (153)
Q Consensus 94 ~~CPl~-~G~~~~~~~~~ip~~~P~g----~y~v~~~l~d~~~~~~i~C~~ 139 (153)
.+||+. .|.|.|+++-.-- -=|.| ++.+++..++.+... +.|-.
T Consensus 4 ~~cpv~~~gd~vwkIs~F~~-RKpeGty~nsvsFnI~aTn~gtld-ftCsa 52 (133)
T 3v0r_A 4 ASCPVTTEGDYVWKISEFYG-RKPEGTYYNSLGFNIKATNGGTLD-FTCSA 52 (133)
T ss_dssp CCSSSCCCCTTEEEEEEEEE-EETTSSSCSEEEEEEEESSSCCCE-EEEEE
T ss_pred CCCccccCCceEEEeeeeee-EcCCCCceeeEEEEEEecCCCcee-eeEec
Confidence 379995 5789887762211 11333 234444444455456 78865
No 60
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=29.79 E-value=1.6e+02 Score=25.73 Aligned_cols=77 Identities=14% Similarity=0.217 Sum_probs=47.3
Q ss_pred CCCCceEEEEEEEEeceeecCc-EEEEEEEEce-----------EEEcccCcCCCCCCCCCCCC-CeeEEEEEEEeCCCC
Q 031744 49 VARGREATFSISATTDKAISGG-KLVIDVSYFG-----------WHIHSETHDLCDETSCPVST-GDFVVAHSQVLPGFT 115 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~-----------~~~~~~~~d~C~~~~CPl~~-G~~~~~~~~~ip~~~ 115 (153)
++||+.++|.+.| ++..+.. .+.+.+..|- +|+... .+.+=.. =+.. ...+.+.++..|...
T Consensus 31 VRRGQ~F~i~l~f--~r~~~~~d~l~l~~~tGp~Ps~~~gT~~~~~l~~~-~~~~W~a--~~~~~~~~~~tvsv~spa~A 105 (692)
T 1vjj_A 31 LRRGQNFQVLMIM--NKGLGSNERLEFIVSTGPYPSESAMTKAVFPLSNG-SSGGWSA--VLQASNGNTLTISISSPASA 105 (692)
T ss_dssp EETTSCEEEEEEE--SSCCCTTCEEEEEEECSSSCCTTTTSEEEEEEESS-CCSSSEE--EEEEEETTEEEEEEECCTTC
T ss_pred EcCCCcEEEEEEE--CCCCCCCceEEEEEEeCCCCCcCCCeEEEEEecCC-CCCceEE--EEEecCCCEEEEEEeCCCCC
Confidence 7899999999987 4444433 5666666662 122221 1111000 0011 113678889999999
Q ss_pred CCeEEEEEEEEEeCC
Q 031744 116 PPGTYSLKMKMYDAT 130 (153)
Q Consensus 116 P~g~y~v~~~l~d~~ 130 (153)
|-|+|++.++.....
T Consensus 106 ~VG~Y~L~v~~~~~~ 120 (692)
T 1vjj_A 106 PIGRYTMALQIFSQG 120 (692)
T ss_dssp CCEEEEEEEEEEETT
T ss_pred eEEEEEEEEEEEecC
Confidence 999999999988743
No 61
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=29.67 E-value=28 Score=26.82 Aligned_cols=18 Identities=11% Similarity=0.010 Sum_probs=13.4
Q ss_pred CCCCCCCCCe-eEEEEEEE
Q 031744 93 ETSCPVSTGD-FVVAHSQV 110 (153)
Q Consensus 93 ~~~CPl~~G~-~~~~~~~~ 110 (153)
...||+.+|+ |+|.+..+
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~ 116 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSH 116 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCC
T ss_pred cccCccCCCCeEEEEEEee
Confidence 3579999996 67776654
No 62
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=29.27 E-value=38 Score=28.07 Aligned_cols=16 Identities=13% Similarity=0.243 Sum_probs=11.8
Q ss_pred CCCCCCCCe-eEEEEEE
Q 031744 94 TSCPVSTGD-FVVAHSQ 109 (153)
Q Consensus 94 ~~CPl~~G~-~~~~~~~ 109 (153)
..||+.+|+ |+|.++.
T Consensus 121 pq~~I~PG~s~~Y~f~~ 137 (481)
T 3zx1_A 121 PHDPILAGEERIYRFEI 137 (481)
T ss_dssp TTSCBCTTCEEEEEEEC
T ss_pred ccCcCCCCCeEEEEEeC
Confidence 379999996 6666554
No 63
>4dbg_A Ranbp-type and C3HC4-type zinc finger-containing; ubiquitin fold, ubiquitination, ligase; 2.71A {Homo sapiens} PDB: 2lgy_A
Probab=29.17 E-value=79 Score=20.65 Aligned_cols=21 Identities=24% Similarity=0.344 Sum_probs=14.2
Q ss_pred CCCCCCeEEEEEEEEEeCCCc
Q 031744 112 PGFTPPGTYSLKMKMYDATKK 132 (153)
Q Consensus 112 p~~~P~g~y~v~~~l~d~~~~ 132 (153)
|..||.+.+.+++.+.|..+.
T Consensus 15 ~~~~~~~~i~l~v~v~d~~s~ 35 (105)
T 4dbg_A 15 PEVSPTQDIRLWVSVEDAQMH 35 (105)
T ss_dssp -----CCCEEEEEEEEESSSC
T ss_pred CCcCCCCcEEEEEEEEccCCC
Confidence 466899999999999998764
No 64
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=29.03 E-value=85 Score=22.31 Aligned_cols=79 Identities=13% Similarity=0.080 Sum_probs=50.2
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEeceeecCc-EEEEEEEEceEE--EcccCcCCCCCCCCCCCCCeeEEEEEEEeC
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATTDKAISGG-KLVIDVSYFGWH--IHSETHDLCDETSCPVSTGDFVVAHSQVLP 112 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~~~~i~~~-~~~v~~~~~~~~--~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip 112 (153)
.++|+++.+.-+|-.-...+.++++|..-+.+++. ..++ ++.|.-. =.++..|-+. -=|+..|.+.|.++..-|
T Consensus 3 ~V~i~~V~vlnnp~~f~~p~~feI~fEc~e~L~~dlewkl-iYVgSa~s~~~DQ~Ld~v~--VGPi~~G~~kFv~~adpP 79 (161)
T 2cu9_A 3 IVNILSVNVLNNPAKFSDPYKFEITFECLEPLKSDLEWKL-TYVGSATSQSYDQILDTLL--VGPIPIGINKFVFEADPP 79 (161)
T ss_dssp SEEEEEEEESSCSEETTSCEEEEEEEEECSCCSSCEEEEE-EEESSTTSCCCEEEEEEEE--ECSCCSEEEEEEEEECCC
T ss_pred eEEEEEEEEeCCchhcCCCeEEEEEEEEcccCCCCeEEEE-EEEcCCCCccCCeEeeEEE--ECCccceEEEEEEEcCCC
Confidence 58899999988887888899999999998887766 2332 2223110 0001112222 247889987777776666
Q ss_pred --CCCCC
Q 031744 113 --GFTPP 117 (153)
Q Consensus 113 --~~~P~ 117 (153)
..+|.
T Consensus 80 d~~~IP~ 86 (161)
T 2cu9_A 80 NIDLLPQ 86 (161)
T ss_dssp CGGGSSC
T ss_pred ChhHCCC
Confidence 44666
No 65
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=28.62 E-value=79 Score=26.51 Aligned_cols=16 Identities=25% Similarity=0.542 Sum_probs=12.1
Q ss_pred CCCCCCC-Ce-eEEEEEE
Q 031744 94 TSCPVST-GD-FVVAHSQ 109 (153)
Q Consensus 94 ~~CPl~~-G~-~~~~~~~ 109 (153)
+.||+.+ |+ |+|.+..
T Consensus 112 tq~~I~P~G~~~~Y~f~~ 129 (559)
T 2q9o_A 112 TECPIPPKGGQRTYRWRA 129 (559)
T ss_dssp TBCCBCTTTEEEEEEEEC
T ss_pred ccCccCCCCCeEEEEEEC
Confidence 4799999 96 6776664
No 66
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=27.97 E-value=2.2e+02 Score=22.44 Aligned_cols=33 Identities=6% Similarity=-0.045 Sum_probs=23.3
Q ss_pred CCCCeeEEEEEEEeCCCCCC--------eEEEEEEEEEeCCC
Q 031744 98 VSTGDFVVAHSQVLPGFTPP--------GTYSLKMKMYDATK 131 (153)
Q Consensus 98 l~~G~~~~~~~~~ip~~~P~--------g~y~v~~~l~d~~~ 131 (153)
+.+|+. |.+++.+|...|+ ..|.+++++.-.-.
T Consensus 103 L~~G~~-fpF~F~lp~~l~eSy~G~~g~IrY~vkv~i~Rp~~ 143 (340)
T 2r51_A 103 ITQSQA-FDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLN 143 (340)
T ss_dssp ECSCEE-EEEEECSBCCCSCCEECSSEEEEEEEEEEECCSSC
T ss_pred cCCCcE-EeeEeCCCCCCCcCeEeeeEEEEEEEEEEEEecCC
Confidence 567766 8888888866553 47888888765443
No 67
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=27.70 E-value=2.4e+02 Score=22.65 Aligned_cols=54 Identities=13% Similarity=0.252 Sum_probs=0.0
Q ss_pred CCCCCe-eEEEEEEEeCCCCC-----------------C--------------------eEEEEEEEEEeCCCc------
Q 031744 97 PVSTGD-FVVAHSQVLPGFTP-----------------P--------------------GTYSLKMKMYDATKK------ 132 (153)
Q Consensus 97 Pl~~G~-~~~~~~~~ip~~~P-----------------~--------------------g~y~v~~~l~d~~~~------ 132 (153)
|+.+|. +...+.+ +|...| . ..|.+++++.-..|.
T Consensus 261 ~V~~gs~~~~~~~L-~P~l~p~~~~~~~aldg~lk~~dt~l~ss~ii~~~~~~~~~gi~VsY~vkV~l~v~~gg~~~~~~ 339 (393)
T 1g4m_A 261 TVAPSSTFCKVYTL-TPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLA 339 (393)
T ss_dssp CBCTTEEEEEEEEE-CCCGGGTTTCSSEEESSCTTSTTCCBCCCCCCCTTCCSGGGSEEEEEEEEEEEEECCC-------
T ss_pred cCCCCCEEeeEEEE-cCCCCCcccccceeeccccccCCcccccceeecCCCCccccceEEEEEEEEEEEecCCCcccccc
Q ss_pred --eEEEEEEEEEEEeecccccCC
Q 031744 133 --QVLTCITFDFSIGFASSVADS 153 (153)
Q Consensus 133 --~~i~C~~~~v~i~~~~~~~~~ 153 (153)
+ ..+++++.|..+.+..+.
T Consensus 340 ~~~--l~~~lPi~i~~p~p~~~~ 360 (393)
T 1g4m_A 340 SSD--VAVELPFTLMHPKPKEEP 360 (393)
T ss_dssp -CE--EEEEEEEEEECCCCC---
T ss_pred ccc--EEEEeCEEEecCCCCccc
No 68
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=27.33 E-value=1.5e+02 Score=20.37 Aligned_cols=39 Identities=8% Similarity=0.127 Sum_probs=25.2
Q ss_pred CCCeeEEEEEEEeCCCCC-----CeEEEEEEEEEeCC-CceEEEEEE
Q 031744 99 STGDFVVAHSQVLPGFTP-----PGTYSLKMKMYDAT-KKQVLTCIT 139 (153)
Q Consensus 99 ~~G~~~~~~~~~ip~~~P-----~g~y~v~~~l~d~~-~~~~i~C~~ 139 (153)
++|.|+|+++.. ....+ ...|+|.+...|++ |+- .+.+.
T Consensus 59 ~~G~Y~YtI~E~-~G~~~gvtYD~~~y~VtV~V~~d~~G~L-~A~v~ 103 (141)
T 3klq_A 59 TVGQYTYRVYQK-PSQNKDYQADTTVFDVLVYVTYDEDGTL-VAKVI 103 (141)
T ss_dssp SCEEEEEEEEEC-CCSSTTEECCCCEEEEEEEEEECTTSCE-EEEEE
T ss_pred CCEEEEEEEEEe-CCCCCCcEEcCCEEEEEEEEEECCCCCE-EEEEE
Confidence 689999988864 33333 34688999988754 443 44443
No 69
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=25.20 E-value=30 Score=30.57 Aligned_cols=53 Identities=2% Similarity=-0.100 Sum_probs=29.2
Q ss_pred CCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCCCCCCCCCe-eEEEEE
Q 031744 49 VARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDETSCPVSTGD-FVVAHS 108 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~ 108 (153)
+..|..+.|++.=.+++ . ..+.+.|+.++....|.=....||+.+|+ |+|.+.
T Consensus 203 ~~~GD~v~v~~~N~l~~----~---~siH~HG~~~~~~~~dG~~~~~~~I~PG~~~tY~f~ 256 (770)
T 2r7e_B 203 AEVEDNIMVTFRNQASR----P---YSFYSSLISYEEDQRQGAEPRKNFVKPNETKTYFWK 256 (770)
T ss_dssp CCSSSCEEEEEECCSSS----C---CCCCBTTCCCCCCSSSCTTTTSSCCCSSCEEEEECC
T ss_pred EEcCCEEEEEEEECCCC----C---cceeecccccccccCCCCcCccCccCCCCeEEEEEE
Confidence 45677777776533332 1 23445555444433223223579999996 666554
No 70
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=25.15 E-value=44 Score=25.19 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=27.4
Q ss_pred CCCCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCCCCCCCCCe-eEEEEEE
Q 031744 49 VARGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDETSCPVSTGD-FVVAHSQ 109 (153)
Q Consensus 49 ~~~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~-~~~~~~~ 109 (153)
+++|..+.|++.=.++. . ..+.+-|+..+.. .|.=....||+.+|+ |+|.+..
T Consensus 40 ~~~Gd~v~v~~~N~~~~----~---~siH~HG~~~~~~-~DG~~~t~~~i~pG~~~~Y~f~~ 93 (276)
T 3kw8_A 40 VNEGDTLHIEFTNTMDV----R---ASLHVHGLDYEIS-SDGTAMNKSDVEPGGTRTYTWRT 93 (276)
T ss_dssp EETTCEEEEEEEECSSS----C---BCCEESSSBCCGG-GSCCTTTTCSBCTTCEEEEEEEC
T ss_pred EECCCEEEEEEEECCCC----C---ccEeecCcccCCc-cCCCcCCcCCCCCCCEEEEEEEc
Confidence 34566666665432221 1 2344445433332 233224579999996 6666654
No 71
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H cell surface, transport protein; HET: HEC; 1.76A {Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Probab=23.68 E-value=66 Score=27.22 Aligned_cols=19 Identities=16% Similarity=0.088 Sum_probs=0.0
Q ss_pred CcchhhHHHHHHHHHHHHh
Q 031744 1 MATIKFKLAIVLSLCLIVD 19 (153)
Q Consensus 1 ~~~~~~~~ll~~~l~~~~~ 19 (153)
|-+++|+||++++|+-++.
T Consensus 1 ~~~~~~~~~~~a~~~~~~~ 19 (874)
T 3ucp_A 1 MSKKLLSVLFGASLAALAL 19 (874)
T ss_dssp -------------------
T ss_pred CchhHHHHHHHHHHHHHHH
Confidence 5557888888888875533
No 72
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=22.24 E-value=1.3e+02 Score=18.24 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=20.0
Q ss_pred EEEeCCCCCCeEEEEEEEEEeCCCc
Q 031744 108 SQVLPGFTPPGTYSLKMKMYDATKK 132 (153)
Q Consensus 108 ~~~ip~~~P~g~y~v~~~l~d~~~~ 132 (153)
++.|...-|...|.+++...+..|.
T Consensus 56 ~~~i~~L~p~t~Y~~~V~A~n~~g~ 80 (100)
T 3b83_A 56 SLTLTNLEPNTTYEIRIVARNGQQY 80 (100)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEE
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCC
Confidence 4567777888899999999987753
No 73
>3vq2_C Lymphocyte antigen 96; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_C* 2z64_C*
Probab=21.82 E-value=1.7e+02 Score=20.39 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=22.9
Q ss_pred cCCCCCCceEEEEEEEEecee-ecCcEEE
Q 031744 46 PYPVARGREATFSISATTDKA-ISGGKLV 73 (153)
Q Consensus 46 Pc~~~~G~~~~i~~~~~~~~~-i~~~~~~ 73 (153)
=|+..+|+.+..++.++.+.. +..|...
T Consensus 88 fCg~~KGE~i~~~~~~~~~~~~fpkG~Y~ 116 (144)
T 3vq2_C 88 FCRALKGETVNTSIPFSFEGILFPKGHYR 116 (144)
T ss_dssp GGGCCTTCCEEEEEEEEECCCCCCSSEEE
T ss_pred ecccccCcEEEEEEEeecCcEEccCCcEE
Confidence 388999999999998888886 7888654
No 74
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=21.32 E-value=52 Score=27.20 Aligned_cols=15 Identities=33% Similarity=0.908 Sum_probs=11.4
Q ss_pred CCCCCCCCe-eEEEEE
Q 031744 94 TSCPVSTGD-FVVAHS 108 (153)
Q Consensus 94 ~~CPl~~G~-~~~~~~ 108 (153)
+.||+.+|+ |+|.+.
T Consensus 83 tq~~I~PG~~~~Y~f~ 98 (503)
T 1hfu_A 83 NQCPISPGHAFLYKFT 98 (503)
T ss_dssp TBCCBCTTCEEEEEEC
T ss_pred ccCCcCCCCeEEEEEE
Confidence 479999996 666554
No 75
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=21.25 E-value=1.3e+02 Score=17.49 Aligned_cols=23 Identities=22% Similarity=0.482 Sum_probs=18.3
Q ss_pred EeCCCCCCeEEEEEEEEEeCCCc
Q 031744 110 VLPGFTPPGTYSLKMKMYDATKK 132 (153)
Q Consensus 110 ~ip~~~P~g~y~v~~~l~d~~~~ 132 (153)
.+....|...|.++++..|..|.
T Consensus 54 ~~~~L~~~t~Y~~~V~A~n~~G~ 76 (88)
T 1k85_A 54 TISGLAADTSYTFTVKAKDAAGN 76 (88)
T ss_dssp EECCCCSSCEEEEEEEEEETTTE
T ss_pred EeCCCCCCCEEEEEEEEEeCCCC
Confidence 45566677889999999998875
No 76
>2f68_X Collagen adhesin; beta barrel, domain SWAP, cell adhesion; 1.95A {Staphylococcus aureus} PDB: 2f6a_A 1amx_A
Probab=20.69 E-value=98 Score=24.04 Aligned_cols=90 Identities=9% Similarity=0.183 Sum_probs=51.2
Q ss_pred cEEEEEEEEecCCCCCCceEEEEEEEEe-ceeecCc-EEEEEEEEc----------eEEEcccCcCCCCCCCCCCCCCee
Q 031744 36 DVKVHGVDISPYPVARGREATFSISATT-DKAISGG-KLVIDVSYF----------GWHIHSETHDLCDETSCPVSTGDF 103 (153)
Q Consensus 36 ~~~i~~v~i~Pc~~~~G~~~~i~~~~~~-~~~i~~~-~~~v~~~~~----------~~~~~~~~~d~C~~~~CPl~~G~~ 103 (153)
...|++++++|..+..|+.+++++.|.+ +..+..| +..+.+=-. .+|+-.. .. ....|=+.+|..
T Consensus 14 ~~~its~~i~~~~i~~g~~~~v~~~f~~~~~~vK~GDt~~i~LP~~~~~~~~~~~~~~~L~d~-G~--~vG~~~V~~~~v 90 (313)
T 2f68_X 14 STNVTDLTVSPSKIEDGGKTTVKMTFDDKNGKIQNGDMIKVAWPTSGTVKIEGYSKTVPLTVK-GE--QVGQAVITPDGA 90 (313)
T ss_dssp HHHEEEEEEESSEECTTEEEEEEEEEESSSSCCCTTEEEEEBCCCSSSEEEEECCEEEEEEET-TE--EEEEEEEETTEE
T ss_pred ccceeEEEEcCceecCCceEEEEEEecCCCCCCCCCCEEEEEcCCCceeeeecccccceeeeC-CE--EEEEEEEeCCEE
Confidence 4678999999999999999999998875 4567777 443322111 1232211 00 001344555666
Q ss_pred EEEEEEEeCCCC-CCeEEEEEEEEEe
Q 031744 104 VVAHSQVLPGFT-PPGTYSLKMKMYD 128 (153)
Q Consensus 104 ~~~~~~~ip~~~-P~g~y~v~~~l~d 128 (153)
+++++-.+.... =.|.+.+.+++.+
T Consensus 91 t~TFnd~Ve~~~nI~G~~~f~~~~~n 116 (313)
T 2f68_X 91 TITFNDKVEKLSDVSGFAEFEVQGRN 116 (313)
T ss_dssp EEEECGGGTTCEEEEEEEEEEEEEEE
T ss_pred EEEeccccCcccccEEEEEEEEEEEc
Confidence 667766666431 0345555555543
No 77
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=20.48 E-value=2.3e+02 Score=19.95 Aligned_cols=62 Identities=16% Similarity=0.187 Sum_probs=36.8
Q ss_pred CCceEEEEEEEEeceeecCcEEEEEEEEceEEEcccCcCCCCCCCCCCCCCeeEEEEEEEeCCCCCCeEEEEEEEEEeCC
Q 031744 51 RGREATFSISATTDKAISGGKLVIDVSYFGWHIHSETHDLCDETSCPVSTGDFVVAHSQVLPGFTPPGTYSLKMKMYDAT 130 (153)
Q Consensus 51 ~G~~~~i~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~d~C~~~~CPl~~G~~~~~~~~~ip~~~P~g~y~v~~~l~d~~ 130 (153)
.|+.++|.. .+.. +.+..++.++.+|-.+-.. ..+.|+|..+. .+.|.|+++++.+|..
T Consensus 15 ~g~~vtv~~--~As~--d~~V~~Ve~~~dg~~v~~~------------t~~~ys~~~~~-----~~~G~htlta~A~D~a 73 (190)
T 3pdd_A 15 AGKDINISA--TVKS--KTPVSKVEFYNGDTLISSD------------TTAPYTAKITG-----AAVGAYNLKAVAVLSD 73 (190)
T ss_dssp TTSCEEEEE--EECC--SSCEEEEEEEETTEEEEEE------------CSSSEEEEECS-----CCSEEEEEEEEEEETT
T ss_pred CCCeEEEEE--EEeC--CCCEEEEEEEECCEEEccc------------cCCceEEEecc-----CCCccEEEEEEEEECC
Confidence 355544444 4442 1244577887777543221 11335554331 5789999999999998
Q ss_pred Cce
Q 031744 131 KKQ 133 (153)
Q Consensus 131 ~~~ 133 (153)
|..
T Consensus 74 Gn~ 76 (190)
T 3pdd_A 74 GRR 76 (190)
T ss_dssp SCE
T ss_pred CCE
Confidence 875
No 78
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=20.17 E-value=1.4e+02 Score=18.40 Aligned_cols=23 Identities=17% Similarity=0.481 Sum_probs=18.8
Q ss_pred EeCCCCCCeEEEEEEEEEeCCCc
Q 031744 110 VLPGFTPPGTYSLKMKMYDATKK 132 (153)
Q Consensus 110 ~ip~~~P~g~y~v~~~l~d~~~~ 132 (153)
.|....|...|.++++..|..|.
T Consensus 79 ~v~~L~p~t~Y~frV~A~n~~G~ 101 (121)
T 1wf5_A 79 TVKGLVPARSYQFRLCAVNDVGK 101 (121)
T ss_dssp EEESCCTTCEEEEEEEEEESSCE
T ss_pred EECCcCCCCEEEEEEEEEcCCcc
Confidence 45566788899999999998875
No 79
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=20.10 E-value=1.3e+02 Score=17.90 Aligned_cols=24 Identities=17% Similarity=0.362 Sum_probs=19.4
Q ss_pred EEeCCCCCCeEEEEEEEEEeCCCc
Q 031744 109 QVLPGFTPPGTYSLKMKMYDATKK 132 (153)
Q Consensus 109 ~~ip~~~P~g~y~v~~~l~d~~~~ 132 (153)
..|....|...|.+++...+..|.
T Consensus 57 ~~i~~L~p~t~Y~~~V~A~n~~G~ 80 (98)
T 3teu_A 57 VTITGLTPGVEYVVSVYALKDNQE 80 (98)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEE
T ss_pred EEecCCCCCCEEEEEEEEEeCCCC
Confidence 456777788899999999997764
Done!