Query 031749
Match_columns 153
No_of_seqs 191 out of 1125
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:15:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031749.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031749hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o1c_A Histidine triad nucleot 100.0 1.9E-36 6.7E-41 214.4 9.1 117 25-144 1-120 (126)
2 3n1s_A HIT-like protein HINT; 100.0 2.9E-34 1E-38 201.4 9.5 105 39-145 2-110 (119)
3 3o0m_A HIT family protein; ssg 100.0 9E-34 3.1E-38 206.0 10.6 113 37-151 2-118 (149)
4 4egu_A Histidine triad (HIT) p 100.0 9.9E-34 3.4E-38 198.4 8.9 110 39-150 3-116 (119)
5 3lb5_A HIT-like protein involv 100.0 2.5E-33 8.7E-38 206.2 9.9 109 37-150 25-139 (161)
6 3ksv_A Uncharacterized protein 100.0 5.5E-33 1.9E-37 202.0 10.1 110 38-152 9-125 (149)
7 3oj7_A Putative histidine tria 100.0 1.8E-32 6.2E-37 191.5 9.7 100 42-144 9-111 (117)
8 1xqu_A HIT family hydrolase; p 100.0 2.5E-32 8.4E-37 198.2 10.4 108 39-150 34-145 (147)
9 3l7x_A SMU.412C, putative HIT- 100.0 2.3E-32 8E-37 203.2 8.6 119 29-152 25-150 (173)
10 3imi_A HIT family protein; str 100.0 2.4E-32 8.1E-37 198.1 8.4 105 38-147 7-117 (147)
11 2eo4_A 150AA long hypothetical 100.0 6.9E-31 2.4E-35 190.5 10.3 104 42-147 1-107 (149)
12 1y23_A HIT, histidine triad pr 100.0 6.1E-31 2.1E-35 189.8 7.1 107 39-147 4-113 (145)
13 3p0t_A Uncharacterized protein 100.0 4.3E-30 1.5E-34 184.1 7.7 102 38-149 3-110 (138)
14 3ano_A AP-4-A phosphorylase; d 100.0 6.6E-30 2.3E-34 196.1 8.5 109 39-149 68-181 (218)
15 3r6f_A HIT family protein; str 100.0 4.4E-30 1.5E-34 183.7 6.5 101 39-149 5-108 (135)
16 1z84_A Galactose-1-phosphate u 100.0 4E-29 1.4E-33 203.7 8.6 134 7-146 181-322 (351)
17 1gup_A Galactose-1-phosphate u 100.0 2.6E-29 9E-34 204.6 7.5 139 6-146 160-309 (348)
18 2oik_A Histidine triad (HIT) p 99.9 2E-26 7E-31 167.8 10.7 105 38-150 8-112 (154)
19 1fit_A FragIle histidine prote 99.9 1.3E-25 4.4E-30 162.4 10.2 103 43-149 4-109 (147)
20 1ems_A Nitfhit, NIT-fragIle hi 99.9 1.2E-24 4.2E-29 181.2 10.7 103 39-149 296-405 (440)
21 3ohe_A Histidine triad (HIT) p 99.8 7.1E-21 2.4E-25 136.3 10.1 90 53-150 12-105 (137)
22 3i24_A HIT family hydrolase; s 99.8 1.5E-20 5E-25 136.4 9.2 91 53-151 12-106 (149)
23 3nrd_A Histidine triad (HIT) p 99.8 8E-19 2.7E-23 125.3 9.7 90 53-151 14-108 (135)
24 3i4s_A Histidine triad protein 99.7 1.1E-17 3.7E-22 121.3 9.7 87 54-151 18-111 (149)
25 3sp4_A Aprataxin-like protein; 99.5 5.7E-14 2E-18 106.1 9.2 84 56-142 23-125 (204)
26 3bl9_A Scavenger mRNA-decappin 98.8 2.2E-08 7.4E-13 79.4 10.1 103 43-147 139-253 (301)
27 1vlr_A MRNA decapping enzyme; 98.8 2.7E-08 9.3E-13 80.1 8.9 102 43-146 186-299 (350)
28 1z84_A Galactose-1-phosphate u 98.3 2.2E-06 7.5E-11 69.5 8.8 97 39-140 60-190 (351)
29 2pof_A CDP-diacylglycerol pyro 96.5 0.0083 2.8E-07 45.6 7.0 85 53-139 30-119 (227)
30 1gup_A Galactose-1-phosphate u 90.9 0.52 1.8E-05 37.7 6.4 58 76-138 107-166 (348)
31 2f5g_A Transposase, putative; 38.8 39 0.0013 22.3 4.0 38 71-116 11-48 (133)
32 3hfn_A ASL2047 protein; HFQ, S 38.4 22 0.00076 21.8 2.4 39 46-90 29-68 (72)
33 1ts9_A Ribonuclease P protein 37.8 38 0.0013 22.1 3.7 26 54-84 35-60 (102)
34 1v76_A RNAse P protein PH1771P 30.2 57 0.0019 20.9 3.5 25 54-84 37-61 (96)
35 3hfo_A SSR3341 protein; HFQ, S 30.2 43 0.0015 20.4 2.7 34 47-84 28-62 (70)
36 2fyx_A Transposase, putative; 29.5 57 0.002 21.9 3.7 37 71-115 21-57 (143)
37 2vjv_A Transposase ORFA; DNA-b 29.1 65 0.0022 22.1 4.0 37 72-116 20-56 (159)
38 2zae_A Ribonuclease P protein 26.4 58 0.002 22.1 3.2 25 54-84 68-92 (127)
39 1mg4_A Doublecortin, doublecor 20.4 90 0.0031 20.6 3.2 27 63-91 18-44 (113)
40 1oqk_A Conserved protein MTH11 20.3 74 0.0025 20.4 2.6 27 54-84 36-62 (97)
No 1
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=100.00 E-value=1.9e-36 Score=214.44 Aligned_cols=117 Identities=45% Similarity=0.736 Sum_probs=100.5
Q ss_pred hhhHHHHhhhcCCCCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHH
Q 031749 25 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRL 104 (153)
Q Consensus 25 ~~~~~~~~~~~~~~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l 104 (153)
|+.|++++++|+ .+++|+||+|++||.+.++||||+.++||+|.+|.+|||+|||||+| ++++.+|++++.++++++
T Consensus 1 ~~~~~~~~~~~~-~~~~CiFC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~l 77 (126)
T 3o1c_A 1 MADEIAKAQVAR-PGGDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKH--ISQISAAEDADESLLGHL 77 (126)
T ss_dssp -----------C-TTCSSHHHHHHHTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCCGGGCCGGGHHHHHHH
T ss_pred CcchhhcccccC-CCCCCCcchhhcCCCcCCEEEECCCEEEEECCCCCCCceEEEEechH--hchHhhCchhHHHHHHHH
Confidence 457889999998 67889999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHhCCCCcEEEEeecCCCccce---eeEEecCCCC
Q 031749 105 LYTAKLVAKQEGLEDGFRIVINDGPNGGHF---SHPRPPPRRT 144 (153)
Q Consensus 105 ~~~~~~~~~~l~~~~g~ni~~n~g~~agq~---vH~HiiPR~~ 144 (153)
+.++++++++++.++|||+++|+|+.+||+ +|+|||||+.
T Consensus 78 ~~~~~~~~~~~~~~~g~ni~~n~g~~agq~v~HlH~Hiipr~~ 120 (126)
T 3o1c_A 78 MIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQ 120 (126)
T ss_dssp HHHHHHHHHHTTCTTCEEEECCCHHHHTCCSSSCCEEEEESSC
T ss_pred HHHHHHHHHHhCCCCCeEEEEecCCccCCccCEeEEEEeCCcc
Confidence 999999999998778999999999999986 6999999975
No 2
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=100.00 E-value=2.9e-34 Score=201.43 Aligned_cols=105 Identities=47% Similarity=0.768 Sum_probs=97.9
Q ss_pred CCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhC-C
Q 031749 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEG-L 117 (153)
Q Consensus 39 ~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~-~ 117 (153)
+++|+||+|++||.|+++||||+.++||+|.+|.+|||+|||||+| ++++.||+++|..++++++.++++++++.+ .
T Consensus 2 ~~~CiFC~I~~ge~~~~iv~ede~~~af~d~~P~~pgH~LViPk~H--v~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~ 79 (119)
T 3n1s_A 2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIA 79 (119)
T ss_dssp CCCCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCChhhhhhcCCCcCCEEEECCCEEEEECCCCCCCCeEEEEehhH--hCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999999999999999 999999999999999999999999998864 4
Q ss_pred CCcEEEEeecCCCccce---eeEEecCCCCC
Q 031749 118 EDGFRIVINDGPNGGHF---SHPRPPPRRTT 145 (153)
Q Consensus 118 ~~g~ni~~n~g~~agq~---vH~HiiPR~~~ 145 (153)
++|||+++|+|+.+||+ +|||||||+.-
T Consensus 80 ~~g~ni~~n~g~~agq~V~HlH~Hiipr~~~ 110 (119)
T 3n1s_A 80 EDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110 (119)
T ss_dssp TTCEEEEEEEHHHHTCCSSSCCEEEEESSCC
T ss_pred CCCeEEEEeCCCCcCCCcCEEEEEEeCCccc
Confidence 68999999999999986 69999999863
No 3
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=100.00 E-value=9e-34 Score=205.98 Aligned_cols=113 Identities=27% Similarity=0.397 Sum_probs=93.6
Q ss_pred CCCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHh-
Q 031749 37 PSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQE- 115 (153)
Q Consensus 37 ~~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l- 115 (153)
+.+++|+||+|+++|.+.++||||++++||+|++|.+|||+|||||+| +.++.+|++++...+..+++.+.+.+++.
T Consensus 2 ~~m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~ 79 (149)
T 3o0m_A 2 PGSMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTH--TVDLTDTPPETVAGMAAVGQRIARAARESG 79 (149)
T ss_dssp -CTTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CCSTTTSCHHHHHHHHHHHHHHHHHHHHST
T ss_pred CCCCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechh--hCCHhHCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 356789999999999999999999999999999999999999999999 99999998755444444444333333344
Q ss_pred CCCCcEEEEeecCCCccce---eeEEecCCCCCCCCCCC
Q 031749 116 GLEDGFRIVINDGPNGGHF---SHPRPPPRRTTNELAPG 151 (153)
Q Consensus 116 ~~~~g~ni~~n~g~~agq~---vH~HiiPR~~~d~~~~~ 151 (153)
..++|||+++|+|+.+||+ +|+|||||+.+|+++++
T Consensus 80 ~~~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~~d~~~~~ 118 (149)
T 3o0m_A 80 LHADGNNIAINDGKAAFQTVFHIHLHVVPRRNGDKLSFA 118 (149)
T ss_dssp TCCSEEEEECCCSGGGTCCSSSCCEEEEEECTTCCCCC-
T ss_pred CCCCceEEEEecCCCCCCccceEEEEEECCccCCCcccc
Confidence 4578999999999999986 69999999999998864
No 4
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=100.00 E-value=9.9e-34 Score=198.38 Aligned_cols=110 Identities=36% Similarity=0.597 Sum_probs=100.4
Q ss_pred CCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhC-C
Q 031749 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEG-L 117 (153)
Q Consensus 39 ~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~-~ 117 (153)
+++|+||+|+++|.+.++||||++++||+|++|.+|||+|||||+| ++++.+|+++|..++++++.++++++++++ .
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~ 80 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKH--YDSLIDIPDKEMDIVSHIHVVINKIAKEKGFD 80 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechh--hCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999999999999999 999999999989999999999999998875 3
Q ss_pred CCcEEEEeecCCCccce---eeEEecCCCCCCCCCC
Q 031749 118 EDGFRIVINDGPNGGHF---SHPRPPPRRTTNELAP 150 (153)
Q Consensus 118 ~~g~ni~~n~g~~agq~---vH~HiiPR~~~d~~~~ 150 (153)
++|||+++|+|+.+||+ +|||||||+.-+.+.+
T Consensus 81 ~~~~ni~~n~g~~agq~v~HlH~Hiip~~~~~~~~~ 116 (119)
T 4egu_A 81 QTGFRVINNCGSDGGQEVKHLHYHILAGKKLPNYEA 116 (119)
T ss_dssp HHCEEEEEEETTTTTCCSCSCCEEEEESSCCCCGGG
T ss_pred CCCEEEEEeCCCCCCCCcCEEEEEEeCCcccCccCc
Confidence 57999999999999986 6999999987665443
No 5
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=100.00 E-value=2.5e-33 Score=206.21 Aligned_cols=109 Identities=38% Similarity=0.498 Sum_probs=92.6
Q ss_pred CCCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHh-
Q 031749 37 PSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQE- 115 (153)
Q Consensus 37 ~~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l- 115 (153)
.++++|+||+|+++|.|.++||||+.|+||+|++|.+|||+|||||+| +.++.||++++ +.+++.+++++++++
T Consensus 25 ~~~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~ee---~~~l~~~~~~v~~~l~ 99 (161)
T 3lb5_A 25 AYDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKG--SRNLLDADTET---LFPVIKAVQKIAKAVK 99 (161)
T ss_dssp CCCTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSTTTSCHHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeec--cchhhhCCHHH---HHHHHHHHHHHHHHHH
Confidence 356889999999999999999999999999999999999999999999 99999998754 445555555555443
Q ss_pred --CCCCcEEEEeecCCCccce---eeEEecCCCCCCCCCC
Q 031749 116 --GLEDGFRIVINDGPNGGHF---SHPRPPPRRTTNELAP 150 (153)
Q Consensus 116 --~~~~g~ni~~n~g~~agq~---vH~HiiPR~~~d~~~~ 150 (153)
..++|||+++|+|+.+||+ +|+|||||+.+|.+|+
T Consensus 100 ~~~~~~g~ni~~n~g~~aGq~V~HlHiHiiPR~~~d~~~~ 139 (161)
T 3lb5_A 100 KAFQADGITVMQFNEAASQQTVYHLHFHIIPRMEGIELTP 139 (161)
T ss_dssp HHHTCSEEEEEEEESGGGTCCSCSCCEEEEEECTTCCC--
T ss_pred HhcCCCCEEEEEecCcccCCCCCEEEEEEEcccCCCCCCc
Confidence 3467999999999999986 6999999999999874
No 6
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=100.00 E-value=5.5e-33 Score=202.03 Aligned_cols=110 Identities=25% Similarity=0.316 Sum_probs=95.3
Q ss_pred CCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhC-
Q 031749 38 SDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEG- 116 (153)
Q Consensus 38 ~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~- 116 (153)
...+|+||+|++||.|+++||||+.++||+|.+|.+|||+|||||+| ++++.||+++ ++.+++.+++++++++.
T Consensus 9 ~~~~~iFc~Ii~geip~~iV~ed~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~---e~~~l~~~~~~v~~~l~~ 83 (149)
T 3ksv_A 9 MAANCIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEH--ASCLHELGME---DAADVGVLLAKASRAVAG 83 (149)
T ss_dssp CCTTCHHHHHHHTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHH---HHHHHHHHHHHHHHHHHC
T ss_pred ccccCHHHHHHcCCCCccEEEECCCEEEEECCCCCCCCEEEEEeChh--hhhhhhCCHH---HHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999 9999999864 56677777777777653
Q ss_pred --CCCcEEEEeecCCCccce---eeEEecCCCCCCC-CCCCC
Q 031749 117 --LEDGFRIVINDGPNGGHF---SHPRPPPRRTTNE-LAPGL 152 (153)
Q Consensus 117 --~~~g~ni~~n~g~~agq~---vH~HiiPR~~~d~-~~~~~ 152 (153)
.++|||+++|+|+.+||+ +|+|||||+.+|. +.+.|
T Consensus 84 ~~~~~g~ni~~n~g~~aGq~v~HlHiHiiPR~~~d~g~~~~w 125 (149)
T 3ksv_A 84 PDGSMQYNVLQNNGSLAHQEVPHVHFHIIPKTDEKTGLKIGW 125 (149)
T ss_dssp TTSCCEEEEEECCSTTTTCCSSSCCEEEEEECCTTSSCCCCC
T ss_pred hhCCCCEEEEEecCcccCCCCCEEEEEEEecccCCCCcccCC
Confidence 467999999999999986 5999999999974 33444
No 7
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.98 E-value=1.8e-32 Score=191.50 Aligned_cols=100 Identities=41% Similarity=0.738 Sum_probs=93.3
Q ss_pred CeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhCCCCcE
Q 031749 42 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGF 121 (153)
Q Consensus 42 C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~~~g~ 121 (153)
|+||+|+++|.+.++||||++++||+|.+|.+|||+|||||+| ++++.||+++|.+++++++.++++++++. ..+||
T Consensus 9 CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~l~~~~~~~~~~~-~~~g~ 85 (117)
T 3oj7_A 9 CIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQH--IASLNEITEENEAFIGKVLYKVSLIGKKE-CPEGY 85 (117)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCSGGGCCTTTHHHHHHHHHHHHHHHHHH-CTTCE
T ss_pred CcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechH--hCCHHHCCHHHHHHHHHHHHHHHHHHHhc-CCCCe
Confidence 9999999999999999999999999999999999999999999 99999999999999999999999998873 23599
Q ss_pred EEEeecCCCccce---eeEEecCCCC
Q 031749 122 RIVINDGPNGGHF---SHPRPPPRRT 144 (153)
Q Consensus 122 ni~~n~g~~agq~---vH~HiiPR~~ 144 (153)
|+++|+|+.+||+ +|+|||||+.
T Consensus 86 ni~~n~g~~agq~v~H~H~Hiipr~~ 111 (117)
T 3oj7_A 86 RVVNNIGEDAGQTVKHIHFHILGGKK 111 (117)
T ss_dssp EEECCCSTTTTCCSSSCCEEEEESSC
T ss_pred EEEEcCCCCCCeeeeEEEEEEeCCCC
Confidence 9999999999986 6999999985
No 8
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.98 E-value=2.5e-32 Score=198.24 Aligned_cols=108 Identities=34% Similarity=0.562 Sum_probs=99.3
Q ss_pred CCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhCC-
Q 031749 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL- 117 (153)
Q Consensus 39 ~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~- 117 (153)
.++|+||+|+++|.+.++||||+.++||+|++|.+|||+|||||+| ++++.||+++|.+++++++.++++++++++.
T Consensus 34 m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrH--v~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~ 111 (147)
T 1xqu_A 34 LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEH--IANVKEINESNAQILIDIHKAANKVAEDLGIA 111 (147)
T ss_dssp CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSC--CSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCT
T ss_pred cCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcc--cCChhHCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999999999999999 9999999998889999999999999999875
Q ss_pred CCcEEEEeecCCCccce---eeEEecCCCCCCCCCC
Q 031749 118 EDGFRIVINDGPNGGHF---SHPRPPPRRTTNELAP 150 (153)
Q Consensus 118 ~~g~ni~~n~g~~agq~---vH~HiiPR~~~d~~~~ 150 (153)
++|||+++|+|+.+||+ +|+|||||+. ..||
T Consensus 112 ~~gyni~~n~g~~aGq~v~HlHlHiiP~~~--~~wp 145 (147)
T 1xqu_A 112 EKGYRLITNCGVAAGQTVFHLHYHLLGGVD--MGPK 145 (147)
T ss_dssp TTCEEEECCCSTTTTCCSCSCCEEEEESSC--CCSC
T ss_pred CCCEEEEEecCcccCCCccEEEEEEeCCCc--CCCC
Confidence 67999999999999986 6999999975 3444
No 9
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.97 E-value=2.3e-32 Score=203.18 Aligned_cols=119 Identities=27% Similarity=0.405 Sum_probs=93.6
Q ss_pred HHHhhhcCCCCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHH
Q 031749 29 NEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTA 108 (153)
Q Consensus 29 ~~~~~~~~~~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~ 108 (153)
+...+.......+|+||+|+++|.|.++||||+.++||+|++|.+|||+|||||+| ++++.||++++.. +++.++
T Consensus 25 ~~~~~~~~~~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrH--v~~l~dL~~ee~~---~L~~~~ 99 (173)
T 3l7x_A 25 TGGQQMGRGSMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEH--VRNALEMTQTQAA---NLFARI 99 (173)
T ss_dssp TSSBCCC-CCCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CSCGGGCCHHHHH---HHHHTH
T ss_pred cccccccCCCCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccc--cCChhhCCHHHHH---HHHHHH
Confidence 33333334456789999999999999999999999999999999999999999999 9999999875544 444444
Q ss_pred HHHHHHh---CCCCcEEEEeecCCCccce---eeEEecCCCCCCC-CCCCC
Q 031749 109 KLVAKQE---GLEDGFRIVINDGPNGGHF---SHPRPPPRRTTNE-LAPGL 152 (153)
Q Consensus 109 ~~~~~~l---~~~~g~ni~~n~g~~agq~---vH~HiiPR~~~d~-~~~~~ 152 (153)
+++++++ ..++|||+++|+|+.+||+ +|+|||||+.+|. +.+.|
T Consensus 100 ~~v~~~l~~~~~~~g~ni~~n~g~~aGq~V~HlHiHiIPR~~~d~gf~~~~ 150 (173)
T 3l7x_A 100 PKIARALQKATKADGLNIINNNEETAGQTVFHAHVHLVPRFADSDEFDIRF 150 (173)
T ss_dssp HHHHHHHHHHHTCSEEEEEECCSGGGTCCSCSCCEEEEEECC-CCSCCCCC
T ss_pred HHHHHHHHHhcCCCCEEEEEecCcccCCCcCEEEEEEEecccCCCCccccc
Confidence 4444433 2467999999999999986 6999999999654 43444
No 10
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.97 E-value=2.4e-32 Score=198.07 Aligned_cols=105 Identities=30% Similarity=0.420 Sum_probs=89.1
Q ss_pred CCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHh--
Q 031749 38 SDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQE-- 115 (153)
Q Consensus 38 ~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l-- 115 (153)
..++|+||+|++||.|.++||||+.++||+|++|.+|||+|||||+| ++++.+|++++.. +++.+++++++++
T Consensus 7 ~m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H--~~~l~dL~~~e~~---~l~~~~~~v~~~l~~ 81 (147)
T 3imi_A 7 TADNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVH--KQDIFALTPEIAS---HIFSVVPKIANAIKA 81 (147)
T ss_dssp CGGGCHHHHHHTTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CCSGGGCCHHHHH---HHHHTHHHHHHHHHH
T ss_pred ccCCCcCcccccCCCcCCEEEECCCEEEEEcCCCCCCcEEEEEEeec--cCChhhCCHHHHH---HHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999 9999999875544 4444444444432
Q ss_pred -CCCCcEEEEeecCCCccce---eeEEecCCCCCCC
Q 031749 116 -GLEDGFRIVINDGPNGGHF---SHPRPPPRRTTNE 147 (153)
Q Consensus 116 -~~~~g~ni~~n~g~~agq~---vH~HiiPR~~~d~ 147 (153)
..++|||+++|+|+.+||+ +|+|||||+.+|.
T Consensus 82 ~~~~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~~~~ 117 (147)
T 3imi_A 82 EFNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGEND 117 (147)
T ss_dssp HHCCSEEEEEEEESGGGTCCSSSCCEEEEEECSTTC
T ss_pred hcCCCCEEEEEeCCcccCCCcCEEEEEEeCCccCCC
Confidence 3467999999999999986 6999999999764
No 11
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.97 E-value=6.9e-31 Score=190.52 Aligned_cols=104 Identities=30% Similarity=0.408 Sum_probs=87.6
Q ss_pred CeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhCCCCcE
Q 031749 42 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGF 121 (153)
Q Consensus 42 C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~~~g~ 121 (153)
|+||+|+++|.+.++|||++.++||+|++|.+|||+|||||+| ++++.+|++++...+..+++.+.+.++....++||
T Consensus 1 CiFC~i~~~e~~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H--~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 78 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKH--FENYLEADEDTLAELAKVVKLVSLGIKDAVKADGL 78 (149)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CcCcccccCCCCccEEEECCCEEEEECCCCCCCCeEEEEechh--hCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 9999999999999999999999999999999999999999999 99999999765554444444333333333456799
Q ss_pred EEEeecCCCccce---eeEEecCCCCCCC
Q 031749 122 RIVINDGPNGGHF---SHPRPPPRRTTNE 147 (153)
Q Consensus 122 ni~~n~g~~agq~---vH~HiiPR~~~d~ 147 (153)
|+++|+|+.+||+ +|+|||||+.+|.
T Consensus 79 ni~~n~g~~~gq~v~HlHiHviPr~~~d~ 107 (149)
T 2eo4_A 79 RLLTNIGRSAGQVIFHLHVHIIPTWEGDY 107 (149)
T ss_dssp EEECCCSGGGTCCSCSCCEEEEEECSSCC
T ss_pred EEEEecCcCCCCCcCEEEEEEECCcCCCC
Confidence 9999999998886 6999999999985
No 12
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.97 E-value=6.1e-31 Score=189.76 Aligned_cols=107 Identities=29% Similarity=0.388 Sum_probs=88.0
Q ss_pred CCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhCCC
Q 031749 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLE 118 (153)
Q Consensus 39 ~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~~ 118 (153)
.++|+||+|+++|.+.++|||++.++||+|.+|.+|||+|||||+| ++++.+|++++...+..+++.+.+.+++...+
T Consensus 4 ~~~C~fC~i~~~e~~~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h--~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~ 81 (145)
T 1y23_A 4 AENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTH--IENVYEFTDELAKQYFHAVPKIARAIRDEFEP 81 (145)
T ss_dssp -CCCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCC
T ss_pred CCCCcCCccccCCCCCCEEEECCCEEEEECCCCCCCCeEEEEEhhh--hhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4679999999999999999999999999999999999999999999 99999999765554444444222222333345
Q ss_pred CcEEEEeecCCCccce---eeEEecCCCCCCC
Q 031749 119 DGFRIVINDGPNGGHF---SHPRPPPRRTTNE 147 (153)
Q Consensus 119 ~g~ni~~n~g~~agq~---vH~HiiPR~~~d~ 147 (153)
+|||+++|+|+.+||+ +|+|||||+.+|.
T Consensus 82 ~~~ni~~n~g~~~g~~v~HlH~HiiPr~~~~~ 113 (145)
T 1y23_A 82 IGLNTLNNNGEKAGQSVFHYHMHIIPRYGKGD 113 (145)
T ss_dssp SEEEEEEEESGGGTCCSSSCCEEEEEECSTTC
T ss_pred CCEEEEEcCCcCCCCCcCEEEEEEEccccCCC
Confidence 7999999999998886 6999999999864
No 13
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.96 E-value=4.3e-30 Score=184.14 Aligned_cols=102 Identities=28% Similarity=0.546 Sum_probs=83.3
Q ss_pred CCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHh--
Q 031749 38 SDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQE-- 115 (153)
Q Consensus 38 ~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l-- 115 (153)
..++|+||+|++||.|.++||||++++||+|.+|.+|||+|||||+| +.++.||++++ +.+++.+++++.+++
T Consensus 3 ~~~~CiFC~i~~~e~p~~iV~e~~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e---~~~l~~~~~~v~~~l~~ 77 (138)
T 3p0t_A 3 GSMASIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREE--IDNWQDVDSAA---FNRVMGVSQLIGKAVCK 77 (138)
T ss_dssp CCHHHHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CCCGGGSCHHH---HHHHHHHHHHHHHHHHH
T ss_pred CCCCChhhHHhcCCCCcCEEEeCCCEEEEecCCCCCCcEEEEEEhHH--hCchhhCCHHH---HHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999 99999998754 445555555555443
Q ss_pred -CCCCcEEEEeecCCCccc---eeeEEecCCCCCCCCC
Q 031749 116 -GLEDGFRIVINDGPNGGH---FSHPRPPPRRTTNELA 149 (153)
Q Consensus 116 -~~~~g~ni~~n~g~~agq---~vH~HiiPR~~~d~~~ 149 (153)
..++++|+.. +|| |+|+|||||+.+|.++
T Consensus 78 ~~~~~~~n~~~-----~gq~v~HlH~HiiPr~~~d~~~ 110 (138)
T 3p0t_A 78 AFRTERSGLII-----AGLEVPHLHVHVFPTRSLSDFG 110 (138)
T ss_dssp HHTCSEEEEEE-----CCSSCSSCCEEEEEESCGGGSS
T ss_pred hcCCCCCcEEE-----CCcccCEEEEEEeccccCCCCc
Confidence 3456888853 455 4799999999987654
No 14
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.96 E-value=6.6e-30 Score=196.06 Aligned_cols=109 Identities=21% Similarity=0.255 Sum_probs=96.8
Q ss_pred CCCCeeeecccCc-CCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhCC
Q 031749 39 DSPTIFDKIINKE-IPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL 117 (153)
Q Consensus 39 ~~~C~FC~ii~~e-~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~ 117 (153)
.++|+||+|++++ .+.++|||++.++||+|++|.+|||+|||||+| +.++.+|++++..++..+++.+.+++++...
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrH--v~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~ 145 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRR--VSELEDLTDLESAELMAFTQKAIRVIKNVSR 145 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSC--CCCGGGSCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechh--hCChhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4579999999884 678999999999999999999999999999999 9999999998888888888877777777777
Q ss_pred CCcEEEEeecCCCccce----eeEEecCCCCCCCCC
Q 031749 118 EDGFRIVINDGPNGGHF----SHPRPPPRRTTNELA 149 (153)
Q Consensus 118 ~~g~ni~~n~g~~agq~----vH~HiiPR~~~d~~~ 149 (153)
++|||+++|+|+.+||. +|+|||||+.+|..|
T Consensus 146 ~~g~ni~~n~G~~aGq~V~~HlHiHIIPR~~gd~~f 181 (218)
T 3ano_A 146 PHGFNVGLNLGTSAGGSLAEHLHVHVVPRWGGDANF 181 (218)
T ss_dssp CSEEEEEEEESGGGTCTTTTSCCEEEEEECTTGGGC
T ss_pred CCCEEEEEecCcccCCcccCEEEEEEEcccCCCCCc
Confidence 78999999999988764 699999999999644
No 15
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.96 E-value=4.4e-30 Score=183.68 Aligned_cols=101 Identities=24% Similarity=0.359 Sum_probs=87.6
Q ss_pred CCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhCCC
Q 031749 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLE 118 (153)
Q Consensus 39 ~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~~ 118 (153)
+++|+||+|++ .+.++||||+.++||+|++|.+|||+|||||+| +.++.||++++ +.+++.+++++.++++.
T Consensus 5 ~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H--~~~l~dL~~~~---~~~l~~~~~~v~~~~~~- 76 (135)
T 3r6f_A 5 MEGCIFCTLYR--KGANIIYETDRLFALIDRYPLSKGHFLVIPKAH--HPYLHNYKPEE---LSGVLDTIRHLVQKFGF- 76 (135)
T ss_dssp -CCCHHHHHHH--HCCSCCEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCGGG---GTTHHHHHHHHHHHHTC-
T ss_pred CCCCcCccccc--CCceEEEECCCEEEEECCCCCCCCeEEEEEhhH--hCCHhHCCHHH---HHHHHHHHHHHHHHhCC-
Confidence 46899999987 678999999999999999999999999999999 99999999754 55667778888888764
Q ss_pred CcEEEEeecCCCccce---eeEEecCCCCCCCCC
Q 031749 119 DGFRIVINDGPNGGHF---SHPRPPPRRTTNELA 149 (153)
Q Consensus 119 ~g~ni~~n~g~~agq~---vH~HiiPR~~~d~~~ 149 (153)
++||+++|+|+ ||+ +|+|||||+.+|.-+
T Consensus 77 ~~~ni~~n~g~--gq~v~HlH~HiiPR~~~d~g~ 108 (135)
T 3r6f_A 77 ERYNILQNNGN--HQEVFHVHFHVIPFVSADERL 108 (135)
T ss_dssp CSEEEECCSSS--SCSSSSCCEEEEECCBTTBSC
T ss_pred CCeEEEEEcCC--CCCccEEEEEEeccccCCCCc
Confidence 59999999999 665 699999999986433
No 16
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.95 E-value=4e-29 Score=203.75 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=117.8
Q ss_pred ccccchhhhhcccccchhhhhHHHHhhhcCCCCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCC
Q 031749 7 SSTSSRLAVLTSHLSAVVMASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDG 86 (153)
Q Consensus 7 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~ 86 (153)
|..=++.|+.+..++|.++..+++++++|+...++|+||+|+++|. +||||++|+||+|++|.+|||+|||||+|
T Consensus 181 Sl~HpH~QI~a~~~~p~~~~~e~~~~~~y~~~~~~ciFc~ii~~E~---iV~E~e~~~af~~~~p~~P~h~lViPk~H-- 255 (351)
T 1z84_A 181 SMSHSHSQMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHF---VIDESSHFVSVAPFAATYPFEIWIIPKDH-- 255 (351)
T ss_dssp CCSSCEEEEEEESSCCHHHHHHHHHHHHHHHHHSSCTTTTHHHHSE---EEEECSSEEEEECTTCSSTTCEEEEESSC--
T ss_pred CCcCccceeEecCcCChHHHHHHHHHHHHHhhcCCCHHHHHHhcCe---EEecCCcEEEEeccCCCCCeEEEEEeccc--
Confidence 3446788999999999999999999999999999999999999886 99999999999999999999999999999
Q ss_pred CCCcccchhchHHHHHHHHH-HHHHHHHHhCCCCcEEEEeecCCCcc----ce---eeEEecCCCCCC
Q 031749 87 LTGLSKAEERHCEILGRLLY-TAKLVAKQEGLEDGFRIVINDGPNGG----HF---SHPRPPPRRTTN 146 (153)
Q Consensus 87 v~~l~dL~~~e~~~l~~l~~-~~~~~~~~l~~~~g~ni~~n~g~~ag----q~---vH~HiiPR~~~d 146 (153)
+.++.+|++++..+++++++ +++++.+.++. +|||+++|+|+.+| |. +|+||+||++.+
T Consensus 256 v~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~-~~yn~~~n~gp~~g~~~~q~v~HlHiHiiPR~~~~ 322 (351)
T 1z84_A 256 SSHFHHLDDVKAVDLGGLLKLMLQKIAKQLND-PPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLSGV 322 (351)
T ss_dssp CSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTS-CCEEEEEECCCTTCCGGGGGGCCCEEEEEECCCCC
T ss_pred cCChHHCCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEeCCCccCCCCCCccceEEEEEEccCCCc
Confidence 99999999988888888887 44555555555 49999999999876 43 799999999754
No 17
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.95 E-value=2.6e-29 Score=204.60 Aligned_cols=139 Identities=14% Similarity=0.134 Sum_probs=121.2
Q ss_pred cccccchhhhhcccccchhhhhHHHHhhhcCCCCCCCeeeecccCcCCc--cEEEECCeEEEEecCCCCCCceEEEEecc
Q 031749 6 ISSTSSRLAVLTSHLSAVVMASENEAAVAAVPSDSPTIFDKIINKEIPS--KVVYEDDKVLAFRDIDPQAPTHILIIPKV 83 (153)
Q Consensus 6 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~C~FC~ii~~e~~~--~iV~e~e~~~a~~d~~P~~pgH~LViPk~ 83 (153)
-|..-++.|+.+..++|.++..+++++++|+...++|+||+|+++|.+. ++||||++++||+|++|.+|||+||+||+
T Consensus 160 ~Sl~HpH~Qi~a~~~~p~~~~~e~~~~~~y~~~~~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~ 239 (348)
T 1gup_A 160 CSNPHPGGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKA 239 (348)
T ss_dssp CSCCSSEEEEEEESSCCHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESS
T ss_pred cCCCCCceeEEecccCChHHHHHHHHHHHHHhcCCCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCc
Confidence 4556688999999999999999999999999888999999999998766 99999999999999999999999999999
Q ss_pred cCCCCCcccchhchHHHHHHHHH-HHHHHHHHhCCCCcEEEEeecCCCcc--c---eeeEEecC---CCCCC
Q 031749 84 KDGLTGLSKAEERHCEILGRLLY-TAKLVAKQEGLEDGFRIVINDGPNGG--H---FSHPRPPP---RRTTN 146 (153)
Q Consensus 84 H~~v~~l~dL~~~e~~~l~~l~~-~~~~~~~~l~~~~g~ni~~n~g~~ag--q---~vH~HiiP---R~~~d 146 (153)
| +.++.||++++...++++++ +++++.+.++...+||+++|.++.+| | |+|+||+| |+.++
T Consensus 240 H--v~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~~~Yn~g~~~~p~~g~~q~v~HlHiHiiPpl~R~~~~ 309 (348)
T 1gup_A 240 H--VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATV 309 (348)
T ss_dssp C--CSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECCCSSSSCCTTCCCEEEEECCBCSSSSC
T ss_pred c--cCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCCCCCCcccEEEEEEecchhccCCc
Confidence 9 99999999888877777776 45555555554459999999998754 4 47999999 99886
No 18
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.94 E-value=2e-26 Score=167.84 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=81.7
Q ss_pred CCCCCeeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhCC
Q 031749 38 SDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL 117 (153)
Q Consensus 38 ~~~~C~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~ 117 (153)
.+++|+||++ .+.++||||++++||+|++|.+|||+||+||+| +.++.||++++...+..+++.+.+.+++...
T Consensus 8 ~~~~C~FC~~----~~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H--~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~ 81 (154)
T 2oik_A 8 FHKNCELCTT----AGGEILWQDALCRVVHVENQDYPGFCRVILNRH--VKEMSDLRPAERDHLMLVVFAVEEAVREVMR 81 (154)
T ss_dssp CCTTCHHHHS----CCSEEEEECSSEEEEECCCTTCTTCEEEEESSC--CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCccCCC----CCCeEEEECCcEEEEEcCCCCCCeEEEEEecCC--cCChHHCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4568999985 467999999999999999999999999999999 9999999986666555555544444444445
Q ss_pred CCcEEEEeecCCCccceeeEEecCCCCCCCCCC
Q 031749 118 EDGFRIVINDGPNGGHFSHPRPPPRRTTNELAP 150 (153)
Q Consensus 118 ~~g~ni~~n~g~~agq~vH~HiiPR~~~d~~~~ 150 (153)
++|||++. .|. ...|+|+|||||+.+|..|+
T Consensus 82 ~~g~ni~~-~gq-~v~HlHiHiiPr~~~d~~~~ 112 (154)
T 2oik_A 82 PDKINLAS-LGN-MTPHVHWHVIPRFKRDRHFP 112 (154)
T ss_dssp CSEEEEEE-CCS-SSCSCEEEEEEECTTSSSTT
T ss_pred CCcEEhHH-hCC-CCCEEEEEEeCCCCCCCCCC
Confidence 67999973 221 12357999999999998764
No 19
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.93 E-value=1.3e-25 Score=162.36 Aligned_cols=103 Identities=18% Similarity=0.265 Sum_probs=79.3
Q ss_pred eeeecccCcCCccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhCCCCcEE
Q 031749 43 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFR 122 (153)
Q Consensus 43 ~FC~ii~~e~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~~~g~n 122 (153)
.||.+. ..+.++||||+.++||+|++|.+|||+|||||+| +.++.+|++++...+..+++.+.+.++....++|||
T Consensus 4 ~f~~~~--ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h--~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 79 (147)
T 1fit_A 4 RFGQHL--IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRP--VERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLT 79 (147)
T ss_dssp EETTEE--ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred EecCcc--cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccc--cCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 466653 2347999999999999999999999999999999 999999997655444444443333333334567999
Q ss_pred EEeecCCCccce---eeEEecCCCCCCCCC
Q 031749 123 IVINDGPNGGHF---SHPRPPPRRTTNELA 149 (153)
Q Consensus 123 i~~n~g~~agq~---vH~HiiPR~~~d~~~ 149 (153)
+++|+|+.+||+ +|+|||||+.+|..|
T Consensus 80 i~~n~g~~agq~v~HlH~HiiPr~~~d~~~ 109 (147)
T 1fit_A 80 FSMQDGPEAGQTVKHVHVHVLPRKAGDFHR 109 (147)
T ss_dssp EEECCSGGGTCCSSSCCEEEEEECTTC---
T ss_pred EEEecCCccCCCccEEEEEEECCcCCCCCC
Confidence 999999998886 599999999998655
No 20
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.91 E-value=1.2e-24 Score=181.16 Aligned_cols=103 Identities=22% Similarity=0.345 Sum_probs=85.0
Q ss_pred CCCCeeeecccCcCCc-cEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHh--
Q 031749 39 DSPTIFDKIINKEIPS-KVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQE-- 115 (153)
Q Consensus 39 ~~~C~FC~ii~~e~~~-~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l-- 115 (153)
.+.|+||+ +|.|. ++||||++++||+|++|.+|||+|||||+| +.++.||++++ +.+|+.+++++.+++
T Consensus 296 ~~~c~fc~---~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h--~~~~~~l~~~~---~~~l~~~~~~v~~~l~~ 367 (440)
T 1ems_A 296 TGGLKFAR---FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRV--VPRLTDLTDAE---TADLFIVAKKVQAMLEK 367 (440)
T ss_dssp SSCCEETT---EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSC--CSCGGGSCHHH---HHHHHHHHHHHHHHHHH
T ss_pred cCceeeec---cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccc--cCChhHCCHHH---HHHHHHHHHHHHHHHHh
Confidence 56899998 56665 789999999999999999999999999999 99999998755 445555555555443
Q ss_pred -CCCCcEEEEeecCCCccce---eeEEecCCCCCCCCC
Q 031749 116 -GLEDGFRIVINDGPNGGHF---SHPRPPPRRTTNELA 149 (153)
Q Consensus 116 -~~~~g~ni~~n~g~~agq~---vH~HiiPR~~~d~~~ 149 (153)
..++|||+++|+|+.+||+ +|+|||||+.+|.-|
T Consensus 368 ~~~~~~~n~~~~~g~~~gq~v~HlH~Hiipr~~~d~~~ 405 (440)
T 1ems_A 368 HHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFGD 405 (440)
T ss_dssp HTTCSEEEEECCCSGGGTCCSSSCCEEEEEECSSCC--
T ss_pred hcCCCCeEEEEecCCCCCCCccEEEEEEeCCCCCCCCc
Confidence 4567999999999998886 599999999998543
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.84 E-value=7.1e-21 Score=136.30 Aligned_cols=90 Identities=12% Similarity=-0.031 Sum_probs=71.7
Q ss_pred CccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHH-HHHHHHHHhCCCCcEEEEeecCCCc
Q 031749 53 PSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLY-TAKLVAKQEGLEDGFRIVINDGPNG 131 (153)
Q Consensus 53 ~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~-~~~~~~~~l~~~~g~ni~~n~g~~a 131 (153)
+..+|+|++.++++++.+|.+|||+||+||+| ++++.||++++...+...+. +++.+.+.. .++|+|++ .+
T Consensus 12 d~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~-~~~~~N~~-----~a 83 (137)
T 3ohe_A 12 DTHKLGESRLCDVLLMNDNTWPWVILVPRVSG--IREIYELPNEQQQRLLFESSALSEGMMELF-GGDKMNVA-----AL 83 (137)
T ss_dssp HEEEEEECSSEEEEEESCTTSCEEEEEESCTT--CCSGGGSCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE-----EC
T ss_pred ccEEEEECCcEEEEEcCCCCCCEEEEEecccc--cCChHHCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEe-----ec
Confidence 35789999999999999999999999999999 99999999766554444333 444443443 46799988 45
Q ss_pred cce---eeEEecCCCCCCCCCC
Q 031749 132 GHF---SHPRPPPRRTTNELAP 150 (153)
Q Consensus 132 gq~---vH~HiiPR~~~d~~~~ 150 (153)
||+ +|+|||||+.+|..||
T Consensus 84 Gq~V~HlH~HviPR~~~D~~~p 105 (137)
T 3ohe_A 84 GNMVPQLHLHHIVRYQGDPAWP 105 (137)
T ss_dssp CSSCCSCCEEEEEECTTSTTTT
T ss_pred cCcCCEEEEEEeCCCCCCCCCC
Confidence 665 6999999999999985
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.83 E-value=1.5e-20 Score=136.43 Aligned_cols=91 Identities=18% Similarity=0.068 Sum_probs=72.0
Q ss_pred CccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchhchHHHHHHHHH-HHHHHHHHhCCCCcEEEEeecCCCc
Q 031749 53 PSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLY-TAKLVAKQEGLEDGFRIVINDGPNG 131 (153)
Q Consensus 53 ~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~-~~~~~~~~l~~~~g~ni~~n~g~~a 131 (153)
+..+|+|++.++||++.+|.+|||+||+||+| ++++.||++++...+...+. +++.+.+.. .++|+|++. +
T Consensus 12 d~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~H--v~~l~dL~~e~~~~l~~~~~~va~al~~~~-~~~~~Ni~~-----a 83 (149)
T 3i24_A 12 DCIVLGNLPLCKVLLIKEDIGPWLILVPRIEE--LKEIHHMTDEQQIQFIKESSAVAQLLEDNF-SPDKINIGA-----L 83 (149)
T ss_dssp HEEEEEECSSEEEEEECBSSTTEEEEEESCTT--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEEE-----C
T ss_pred CCEEEEECCCEEEEEcCCCCCCEEEEEeCccc--cCChhHCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEhh-----h
Confidence 35789999999999999999999999999999 99999999866554444333 444444444 457999873 5
Q ss_pred cce---eeEEecCCCCCCCCCCC
Q 031749 132 GHF---SHPRPPPRRTTNELAPG 151 (153)
Q Consensus 132 gq~---vH~HiiPR~~~d~~~~~ 151 (153)
||+ +|+|||||+.+|..|++
T Consensus 84 Gq~V~HlH~HvIPR~~~D~~~~~ 106 (149)
T 3i24_A 84 GNLVPQLHIHHIARFTTDVAWPG 106 (149)
T ss_dssp CSSCCSCCEEEEEECTTSTTTTS
T ss_pred hCCCCEEEEEEeCCccCCCCCCc
Confidence 665 69999999999988764
No 23
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.78 E-value=8e-19 Score=125.28 Aligned_cols=90 Identities=14% Similarity=0.064 Sum_probs=68.4
Q ss_pred CccEEEECCeEEEEecCCCCCCceEEEEec-ccCCCCCcccchhchHHHHHHHHH-HHHHHHHHhCCCCcEEEEeecCCC
Q 031749 53 PSKVVYEDDKVLAFRDIDPQAPTHILIIPK-VKDGLTGLSKAEERHCEILGRLLY-TAKLVAKQEGLEDGFRIVINDGPN 130 (153)
Q Consensus 53 ~~~iV~e~e~~~a~~d~~P~~pgH~LViPk-~H~~v~~l~dL~~~e~~~l~~l~~-~~~~~~~~l~~~~g~ni~~n~g~~ 130 (153)
+..+|++++.++++++.+|.+|| +||||| +| +++++||++++...+...+. +++.+.+.. .++|+|++ .
T Consensus 14 ~~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~-~~~~~N~~-----~ 84 (135)
T 3nrd_A 14 DGIPIGTLGLCQMRLMNDRRWPW-LILVPQRAD--IKEVFELTPLDQAMLTFETNLVAAGLKKAT-GAEKINIG-----A 84 (135)
T ss_dssp HEEEEEECSSEEEEEESCTTSCE-EEEEECCTT--CCSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCSEEEEE-----E
T ss_pred CCEEEEECCcEEEEEcCCCCCCE-EEEEcCccc--cCChHHCCHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEe-----e
Confidence 35789999999999999999995 578888 69 99999999766544444333 334343333 45799987 3
Q ss_pred ccce---eeEEecCCCCCCCCCCC
Q 031749 131 GGHF---SHPRPPPRRTTNELAPG 151 (153)
Q Consensus 131 agq~---vH~HiiPR~~~d~~~~~ 151 (153)
+||+ +|+|||||+.+|..|++
T Consensus 85 aGq~V~HlH~HviPR~~~D~~~~~ 108 (135)
T 3nrd_A 85 LGNIVRQLHVHVIARREGDPNWPG 108 (135)
T ss_dssp CCSSCCSCCEEEEEECTTSTTTTS
T ss_pred ccCCCCEEEEEEecCCCCCCCCCC
Confidence 5565 69999999999999864
No 24
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.74 E-value=1.1e-17 Score=121.31 Aligned_cols=87 Identities=16% Similarity=0.143 Sum_probs=67.2
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEecc-cCCCCCcccchhchHHHHHHHHHHHHHHHHHh---CCCCcEEEEeecCC
Q 031749 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKV-KDGLTGLSKAEERHCEILGRLLYTAKLVAKQE---GLEDGFRIVINDGP 129 (153)
Q Consensus 54 ~~iV~e~e~~~a~~d~~P~~pgH~LViPk~-H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l---~~~~g~ni~~n~g~ 129 (153)
..+++|...+++++...| +++|+|||||+ | +++++||++++ +.+++..++++++++ ..++|||++
T Consensus 18 ~~~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H--~~~l~dL~~e~---~~~l~~~~~~va~~l~~~~~~~g~N~~----- 86 (149)
T 3i4s_A 18 TIDIGDLPLSKVLVIKDA-NYPWLLLVPRRPD--AVEIIDLDEVQ---QAQLMTEISRVSRALKEITKCDKLNIA----- 86 (149)
T ss_dssp EEEEEECSSEEEEEESCT-TSCEEEEEECCTT--CCSGGGSCHHH---HHHHHHHHHHHHHHHHHHHTCSEEEEE-----
T ss_pred CEEEEEcCceEEEECCCC-CCCEEEEEecccc--cCChhHCCHHH---HHHHHHHHHHHHHHHHHhcCCCeEEEe-----
Confidence 568899999999998554 56699999999 9 99999998754 455555555555543 346799886
Q ss_pred Cccce---eeEEecCCCCCCCCCCC
Q 031749 130 NGGHF---SHPRPPPRRTTNELAPG 151 (153)
Q Consensus 130 ~agq~---vH~HiiPR~~~d~~~~~ 151 (153)
.+||+ +|+|||||+.+|..|++
T Consensus 87 ~aGq~V~HlH~HvIPR~~~D~~~p~ 111 (149)
T 3i4s_A 87 ALGNLVPQLHVHIIARRTGDAAWPR 111 (149)
T ss_dssp ECCSSCCSCCEEEEEECTTSTTTTS
T ss_pred ecCCcCCEEEEEEECCcCCCCCCCc
Confidence 45665 69999999999998863
No 25
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=99.51 E-value=5.7e-14 Score=106.09 Aligned_cols=84 Identities=19% Similarity=0.256 Sum_probs=63.3
Q ss_pred EEEECCeEEEEecCCCCCCceEEEEecccCCCCCcccchh---chHHHHHHHHHHHH-HHH-HHh--------CCC----
Q 031749 56 VVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEE---RHCEILGRLLYTAK-LVA-KQE--------GLE---- 118 (153)
Q Consensus 56 iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l~dL~~---~e~~~l~~l~~~~~-~~~-~~l--------~~~---- 118 (153)
+|||||.++||.|.+|.+|||+|||||+| +.++.++.+ ++.+++.+|..+++ +++ +.. +.+
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h--~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~ 100 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDP--HLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEA 100 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCT--TTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccc--cCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCC
Confidence 99999999999999999999999999999 888775443 23567778777777 532 221 111
Q ss_pred --CcEEEEeecCCCccceeeEEecCC
Q 031749 119 --DGFRIVINDGPNGGHFSHPRPPPR 142 (153)
Q Consensus 119 --~g~ni~~n~g~~agq~vH~HiiPR 142 (153)
..++++++.+| ...++|+|||-+
T Consensus 101 ~~~~i~~GfHa~P-Sm~HLHLHVIS~ 125 (204)
T 3sp4_A 101 LCNYIKVGFHAGP-SMNNLHLHIMTL 125 (204)
T ss_dssp HHTTEEEEEESSC-SSSSCCEEEEES
T ss_pred eeeeEeccCCCCC-cccceeEEEecc
Confidence 25788888777 445689999854
No 26
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=98.83 E-value=2.2e-08 Score=79.44 Aligned_cols=103 Identities=15% Similarity=0.201 Sum_probs=82.6
Q ss_pred eeeecccC-cCCccEEEECCe----EEEEecCC----CCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHH
Q 031749 43 IFDKIINK-EIPSKVVYEDDK----VLAFRDID----PQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAK 113 (153)
Q Consensus 43 ~FC~ii~~-e~~~~iV~e~e~----~~a~~d~~----P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~ 113 (153)
+.-+|+.+ +.+.++||||+. |+++-|.+ |...-|+|+||++|. +.++.||+.++...|..|...+++++.
T Consensus 139 Wv~nIl~~~~E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~-I~SlrdL~~~HlpLL~~M~~~~~~~i~ 217 (301)
T 3bl9_A 139 WVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRG-IRSLRDLTPEHLPLLRNILHQGQEAIL 217 (301)
T ss_dssp HHHHHHTTSSSGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSC-CCSGGGCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccC-CCChHHCCHhHHHHHHHHHHHHHHHHH
Confidence 33345555 456799999988 99999876 889999999999974 899999999999999999999999887
Q ss_pred Hh-CC-CCcEEEEeecCCCccceeeEEecC-CCCCCC
Q 031749 114 QE-GL-EDGFRIVINDGPNGGHFSHPRPPP-RRTTNE 147 (153)
Q Consensus 114 ~l-~~-~~g~ni~~n~g~~agq~vH~HiiP-R~~~d~ 147 (153)
.. +. .+.+.++++..| ...|+|+|++. .+.+.+
T Consensus 218 ~~y~~~~~~~rlgfHy~P-S~yHLHlHvis~~~~s~~ 253 (301)
T 3bl9_A 218 QRYRMKGDHLRVYLHYLP-SYYHLHVHFTALGFEAPG 253 (301)
T ss_dssp HHHCCCGGGEEEEEESSC-SSSSCEEEEEETTSCCTT
T ss_pred HhcCCChHHeEEEecCCC-CcceEEEEEEecCCCCCc
Confidence 75 42 468999999888 44678999874 544433
No 27
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=98.77 E-value=2.7e-08 Score=80.06 Aligned_cols=102 Identities=14% Similarity=0.201 Sum_probs=80.5
Q ss_pred eeeecccC-cCCccEEEECCe----EEEEecCC----CCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHH
Q 031749 43 IFDKIINK-EIPSKVVYEDDK----VLAFRDID----PQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAK 113 (153)
Q Consensus 43 ~FC~ii~~-e~~~~iV~e~e~----~~a~~d~~----P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~ 113 (153)
+.-+|+.+ +.+.++||||+. |+++.|.+ |...-|+|+||++|. +.++.||+.++..+|..|...+++++.
T Consensus 186 Wv~nIl~~~~E~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~d-I~SlRdL~~~HlpLL~~M~~~~~~ii~ 264 (350)
T 1vlr_A 186 WVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRG-IRSLRDLTPEHLPLLRNILREGQEAIL 264 (350)
T ss_dssp HHHHHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSC-CCSGGGCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCccccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccC-CCChHHCCHhHHHHHHHHHHHHHHHHH
Confidence 33445555 456799999988 99999876 889999999999974 899999999999999999999999887
Q ss_pred Hh-CC-CCcEEEEeecCCCccceeeEEecC-CCCCC
Q 031749 114 QE-GL-EDGFRIVINDGPNGGHFSHPRPPP-RRTTN 146 (153)
Q Consensus 114 ~l-~~-~~g~ni~~n~g~~agq~vH~HiiP-R~~~d 146 (153)
.. +. .+.+.++++..| ...++|+|||. .+.+.
T Consensus 265 ~~yg~~~~~lRlgfHy~P-S~yHLHlHvis~~~~s~ 299 (350)
T 1vlr_A 265 KRYQVTGDRLRVYLHYLP-SYYHLHVHFTALGFEAP 299 (350)
T ss_dssp HHHCCCGGGEEEEEESSC-SSSSCEEEEEETTSCCT
T ss_pred HhcCCChHHeEEEecCCC-CcceEEEEEEeccCCCC
Confidence 75 43 468999999888 44678999874 54443
No 28
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.31 E-value=2.2e-06 Score=69.52 Aligned_cols=97 Identities=19% Similarity=0.170 Sum_probs=66.5
Q ss_pred CCCCeeeecccCcCCccEEE-----ECCeEEEEecCCCCCC------------c-----------eEEEEecccCCCCCc
Q 031749 39 DSPTIFDKIINKEIPSKVVY-----EDDKVLAFRDIDPQAP------------T-----------HILIIPKVKDGLTGL 90 (153)
Q Consensus 39 ~~~C~FC~ii~~e~~~~iV~-----e~e~~~a~~d~~P~~p------------g-----------H~LViPk~H~~v~~l 90 (153)
+..|+||.-.....+..+.. .+-.+++|.+.+|..+ | +++|.+.+| ..++
T Consensus 60 ~~~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H--~~~l 137 (351)
T 1z84_A 60 PSSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVH--SIQL 137 (351)
T ss_dssp -CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSS--SCCG
T ss_pred CCCCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCC--CCCc
Confidence 34799998543332322222 3456899999999984 5 889999999 8899
Q ss_pred ccchhchHHHHHHHHHHHHHHHHHhC---CCCcEEEEeecCCCccce---eeEEec
Q 031749 91 SKAEERHCEILGRLLYTAKLVAKQEG---LEDGFRIVINDGPNGGHF---SHPRPP 140 (153)
Q Consensus 91 ~dL~~~e~~~l~~l~~~~~~~~~~l~---~~~g~ni~~n~g~~agq~---vH~Hii 140 (153)
.+|+. +++.+++.+.+.-.+.+. ....+++..|-|+.+|.+ .|.+|+
T Consensus 138 ~~ls~---~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~ 190 (351)
T 1z84_A 138 SDIDP---VGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMM 190 (351)
T ss_dssp GGSCH---HHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEE
T ss_pred HHCCH---HHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeE
Confidence 99986 445566665555555553 356889999999998866 366664
No 29
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=96.48 E-value=0.0083 Score=45.60 Aligned_cols=85 Identities=14% Similarity=0.210 Sum_probs=55.9
Q ss_pred CccEEEECCeEEEEecCCCCCCceEEEEeccc-CCCCCcccchhchHHHHHHHHHHHHHHHHHhCC--C-CcEEEEeecC
Q 031749 53 PSKVVYEDDKVLAFRDIDPQAPTHILIIPKVK-DGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL--E-DGFRIVINDG 128 (153)
Q Consensus 53 ~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H-~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~~--~-~g~ni~~n~g 128 (153)
|+.-|.....+++|-| +.-|.|+|+||..- -++++..-+++..+..++.....-..+.++++. + +...+.+|.-
T Consensus 30 PC~~Vd~~~gyvvlKD--~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~ 107 (227)
T 2pof_A 30 PCAEVKPNAGYVVLKD--LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSR 107 (227)
T ss_dssp TSSEEETTTTEEEEEC--SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCG
T ss_pred CCceEccCCCEEEEeC--CCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCC
Confidence 4455666677888877 55899999999876 125555555555566777766666666777764 2 4677888753
Q ss_pred CCccce-eeEEe
Q 031749 129 PNGGHF-SHPRP 139 (153)
Q Consensus 129 ~~agq~-vH~Hi 139 (153)
-.-.|. +||||
T Consensus 108 ~gRSQnQLHIHI 119 (227)
T 2pof_A 108 TGRTQNHFHIHI 119 (227)
T ss_dssp GGCSCCSCCEEE
T ss_pred CCccccceeeeh
Confidence 211232 89997
No 30
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=90.92 E-value=0.52 Score=37.69 Aligned_cols=58 Identities=14% Similarity=0.123 Sum_probs=32.3
Q ss_pred eEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhC-CCCcEEEEeecCCCcccee-eEE
Q 031749 76 HILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEG-LEDGFRIVINDGPNGGHFS-HPR 138 (153)
Q Consensus 76 H~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~-~~~g~ni~~n~g~~agq~v-H~H 138 (153)
.++|...+| -.++.+++.++. ..++.+...-.+.+. ...-..+..|-|+.+|.++ |-|
T Consensus 107 ~VIi~sp~H--~~~l~~l~~~~~---~~vi~~~~~r~~~l~~~~~yV~iF~N~G~~~G~Sl~HpH 166 (348)
T 1gup_A 107 RVICFSPDH--SKTLPELSVAAL---TEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPG 166 (348)
T ss_dssp EEEESCSCT--TCCGGGSCHHHH---HHHHHHHHHHHHHHHHHCSEEEEEEEESGGGTCSCCSSE
T ss_pred EEEEcCCcc--cCChhhCCHHHH---HHHHHHHHHHHHHHhhcCCEEEEecccCCcCCcCCCCCc
Confidence 344445578 788999886443 344443222223332 1223446778899888764 444
No 31
>2f5g_A Transposase, putative; dimer, stem-loop binding, gene regulation; 1.70A {Sulfolobus solfataricus} SCOP: d.58.57.1 PDB: 2f4f_A 2ec2_A
Probab=38.79 E-value=39 Score=22.25 Aligned_cols=38 Identities=26% Similarity=0.232 Sum_probs=21.4
Q ss_pred CCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhC
Q 031749 71 PQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEG 116 (153)
Q Consensus 71 P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~ 116 (153)
|...+|+.+++|.- .+-|.+ +....+......+.+..+
T Consensus 11 ~~~~yhi~~~~~~R--~~v~~~------~~~~~l~~~l~~~~~~~~ 48 (133)
T 2f5g_A 11 YLCNYHFVWIPKHR--RNTLVN------EIAEYTKEVLKSIAEELG 48 (133)
T ss_dssp EECEEEEEECBSSC--TTCSCH------HHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEEEecCcc--hhhhch------hHHHHHHHHHHHHHHhCC
Confidence 34678888889876 443432 222334445556655553
No 32
>3hfn_A ASL2047 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 2.31A {Nostoc SP}
Probab=38.36 E-value=22 Score=21.81 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=26.2
Q ss_pred ecccCcC-CccEEEECCeEEEEecCCCCCCceEEEEecccCCCCCc
Q 031749 46 KIINKEI-PSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGL 90 (153)
Q Consensus 46 ~ii~~e~-~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H~~v~~l 90 (153)
+.+.|+. .+++.++|.+|+++.+.. ++-.+|.|.+ +..+
T Consensus 29 ~L~tGd~l~G~i~WQD~~cl~L~~~~----~~~~LI~R~A--I~~I 68 (72)
T 3hfn_A 29 KLVTGDAITGRVLWQDPTCVCIADEN----SRQTTIWKQA--IAYL 68 (72)
T ss_dssp EETTSCEEEEEEEEECSSEEEEEC-------CEEEEEGGG--EEEE
T ss_pred EecCCCEEEEEEEEECCCEEEEEcCC----CCeEEEEeee--eEEE
Confidence 3455543 468899999999999766 5667788776 5443
No 33
>1ts9_A Ribonuclease P protein component 1; anti-parallel, beta-sheet, alpha helix, internal salt bridge, selenomethionine, SM-fold, hydrolase; 1.70A {Archaeoglobus fulgidus} SCOP: b.137.1.1 PDB: 1tsf_A 1pc0_A
Probab=37.79 E-value=38 Score=22.11 Aligned_cols=26 Identities=19% Similarity=0.249 Sum_probs=22.9
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEeccc
Q 031749 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVK 84 (153)
Q Consensus 54 ~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H 84 (153)
+.+|.|+.+.+.+.. .+.+.+|||.+
T Consensus 35 GiVV~ETkntf~I~t-----~~~~k~VPK~~ 60 (102)
T 1ts9_A 35 GEVVDETQNTLKIMT-----EKGLKVVAKRG 60 (102)
T ss_dssp EEEEEECSSEEEEEE-----SSSEEEEECTT
T ss_pred EEEEEeccceEEEEe-----CCcEEEEECCC
Confidence 578999999999986 46899999998
No 34
>1v76_A RNAse P protein PH1771P; RNA binding protein, archaeal RNAse P protein; 2.00A {Pyrococcus horikoshii} SCOP: b.137.1.1
Probab=30.22 E-value=57 Score=20.95 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=22.3
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEeccc
Q 031749 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVK 84 (153)
Q Consensus 54 ~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H 84 (153)
..+|.|+.+.+.+.. ..+.+|||.+
T Consensus 37 GiVV~ET~ntf~I~t------~~~~~VPK~~ 61 (96)
T 1v76_A 37 GYVIDETRNMLVIAG------DRIWKVPKDV 61 (96)
T ss_dssp EEEEEECSSEEEEES------SSEEEEESTT
T ss_pred EEEEEeccceEEEEc------CCEEEEECCC
Confidence 578999999999987 3899999998
No 35
>3hfo_A SSR3341 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 1.30A {Synechocystis SP}
Probab=30.16 E-value=43 Score=20.38 Aligned_cols=34 Identities=12% Similarity=0.228 Sum_probs=25.1
Q ss_pred cccCc-CCccEEEECCeEEEEecCCCCCCceEEEEeccc
Q 031749 47 IINKE-IPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVK 84 (153)
Q Consensus 47 ii~~e-~~~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H 84 (153)
.+.|+ ..+.+.++|.+|+++.+.. ++-.+|.|.+
T Consensus 28 L~tG~~l~G~i~WQD~~cl~L~~~~----~~~~LI~r~A 62 (70)
T 3hfo_A 28 LLTGDSLFGTIRWQDTDGLGLVDDS----ERSTIVRLAA 62 (70)
T ss_dssp ETTSCEEEEEEEEECSSEEEEECTT----CCEEEEEGGG
T ss_pred ecCCCEEEEEEEEeCCCEEEEEcCC----CCeEEEEeee
Confidence 44553 3468899999999998764 5667787766
No 36
>2fyx_A Transposase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Deinococcus radiodurans} SCOP: d.58.57.1 PDB: 2xqc_A 2xm3_A 2xma_A 2xo6_A
Probab=29.50 E-value=57 Score=21.88 Aligned_cols=37 Identities=19% Similarity=0.173 Sum_probs=21.3
Q ss_pred CCCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHh
Q 031749 71 PQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQE 115 (153)
Q Consensus 71 P~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l 115 (153)
|...+|+.+++|.- .+-|. + +....+...+..+.+..
T Consensus 21 ~~~~Yhit~~~k~R--~~vf~---~---~~~~~l~~~l~~~~~~~ 57 (143)
T 2fyx_A 21 YKLEYHLIWATKYR--HQVLV---D---EVADGLKDILRDIATQN 57 (143)
T ss_dssp EEEEEEEEEECGGG--CCCCC---H---HHHHHHHHHHHHHHHHT
T ss_pred cceEEEEEEEecCC--hhhcC---h---HHHHHHHHHHHHHHhhc
Confidence 45678999999876 44342 2 13334444555665554
No 37
>2vjv_A Transposase ORFA; DNA-binding protein, protein-DNA complex, HUH motif, DNA stem loop, transposition; 1.90A {Helicobacter pylori} SCOP: d.58.57.1 PDB: 2vhg_A 2vic_A 2vju_A 2vih_A 2a6m_A 2a6o_A
Probab=29.12 E-value=65 Score=22.11 Aligned_cols=37 Identities=27% Similarity=0.193 Sum_probs=20.9
Q ss_pred CCCceEEEEecccCCCCCcccchhchHHHHHHHHHHHHHHHHHhC
Q 031749 72 QAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEG 116 (153)
Q Consensus 72 ~~pgH~LViPk~H~~v~~l~dL~~~e~~~l~~l~~~~~~~~~~l~ 116 (153)
...+|+.++||.- .+-|. + +....+...++.+.+..+
T Consensus 20 ~~~YHiv~~~k~R--~~vf~---~---~~~~~l~~~l~~~~~~~~ 56 (159)
T 2vjv_A 20 SCKYHIVWCPKYR--RKVLV---G---AVEMRLKEIIQEVAKELR 56 (159)
T ss_dssp ECEEEEEECBGGG--CCCCS---H---HHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEEeccCC--ccccC---c---cHHHHHHHHHHHhhccCC
Confidence 3567999999876 44332 2 223344445556666543
No 38
>2zae_A Ribonuclease P protein component 1; ribonuclease P protein subunits, hetero dimer, hydrolase, TR processing; 2.21A {Pyrococcus horikoshii} PDB: 2ki7_A
Probab=26.37 E-value=58 Score=22.14 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=22.3
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEeccc
Q 031749 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVK 84 (153)
Q Consensus 54 ~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H 84 (153)
..+|.|+.+.+.+.. ..+.+|||.+
T Consensus 68 GiVV~ETknTf~I~t------~~~k~VPK~~ 92 (127)
T 2zae_A 68 GYVIDETRNMLVIAG------DRIWKVPKDV 92 (127)
T ss_dssp EEEEEEETTEEEEES------SSEEEEESTT
T ss_pred EEEEEcccceEEEEc------CCEEEEECCC
Confidence 578999999999987 4899999998
No 39
>1mg4_A Doublecortin, doublecortin-like kinase (N-terminal domain); DCX domain, microtubule bundling, cortex development, transferase; 1.50A {Homo sapiens} SCOP: d.15.11.1 PDB: 1mfw_A 1mjd_A 2bqq_A 2xrp_I*
Probab=20.40 E-value=90 Score=20.57 Aligned_cols=27 Identities=15% Similarity=0.157 Sum_probs=21.9
Q ss_pred EEEEecCCCCCCceEEEEecccCCCCCcc
Q 031749 63 VLAFRDIDPQAPTHILIIPKVKDGLTGLS 91 (153)
Q Consensus 63 ~~a~~d~~P~~pgH~LViPk~H~~v~~l~ 91 (153)
+.++-+-++.++|-.++|.++. +.+|.
T Consensus 18 I~~yrNGD~~~~G~~~~v~~~~--~~tfd 44 (113)
T 1mg4_A 18 VRFYRNGDRYFKGIVYAISPDR--FRSFE 44 (113)
T ss_dssp EEEEETTCSSCCCEEEEECTTT--CSSHH
T ss_pred EEEEECCCCCCCCEEEEECccc--cCCHH
Confidence 4556677899999999999988 77764
No 40
>1oqk_A Conserved protein MTH11; OB fold, archaeal RNAse P protein subunit, hydrolase; NMR {Methanothermobacterthermautotrophicus} SCOP: b.137.1.1
Probab=20.30 E-value=74 Score=20.39 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=22.5
Q ss_pred ccEEEECCeEEEEecCCCCCCceEEEEeccc
Q 031749 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVK 84 (153)
Q Consensus 54 ~~iV~e~e~~~a~~d~~P~~pgH~LViPk~H 84 (153)
..+|.|+.+.+.+.... +.+.+|||.+
T Consensus 36 GiVV~ET~ntf~I~t~~----~~~k~VPK~~ 62 (97)
T 1oqk_A 36 GRVVDETRNTLRIEMDD----GREITVPKGI 62 (97)
T ss_dssp EECCEEETTEEEEEETT----TEEEEEECTT
T ss_pred EEEEEcccceEEEEcCC----CcEEEEECCC
Confidence 57889999999998543 5899999998
Done!