BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031754
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 123/140 (87%), Positives = 131/140 (93%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYP 60
MSSPSKRREMDLMKLMMSDYKVEMINDG+QEF+V F GP +S Y GGVW+IRVELPDAYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPS+GF+ KIYHPN+DEMSGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61 YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 121 NGEAAALLMRDRAAYEQRVK 140
NGEAAAL+MRDR YEQRVK
Sbjct: 121 NGEAAALMMRDRPTYEQRVK 140
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 122/140 (87%), Positives = 131/140 (93%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYP 60
MSSPSKRREMD+MKLMMSDYKVE INDG+QEFYV F GP +S Y GGVW+IRVELPDAYP
Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPS+GF+ KIYHPN+DE+SGSVCLDVINQTWSPMFDLVNVFE FLPQLLLYPNPSDPL
Sbjct: 61 YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 121 NGEAAALLMRDRAAYEQRVK 140
NGEAAAL+MRDR AYEQRVK
Sbjct: 121 NGEAAALMMRDRPAYEQRVK 140
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4
PE=1 SV=1
Length = 184
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/140 (84%), Positives = 131/140 (93%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYP 60
MSSPSKRREMDLMKLMMSDYKV+MINDG+ EF+VHF GP +S Y GGVW++RVEL +AYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPSIGF NKIYHPN+DEMSGSVCLDVINQTWSPMFDLVN+FEVFLPQLLLYPNPSDPL
Sbjct: 61 YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120
Query: 121 NGEAAALLMRDRAAYEQRVK 140
NGEAA+L+MRD+ AYE +VK
Sbjct: 121 NGEAASLMMRDKNAYENKVK 140
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 128/140 (91%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYP 60
M+SPSKRREMD+MKLMMSDYKV+ +ND +Q FYV F GP +S Y GGVW+I+VELP+AYP
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPS+GFVNKIYHPN+DE SG+VCLDVINQTWSPMFDL+NVFE FLPQLLLYPNPSDP
Sbjct: 61 YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120
Query: 121 NGEAAALLMRDRAAYEQRVK 140
NGEAA+LLMRDRAAYE +VK
Sbjct: 121 NGEAASLLMRDRAAYELKVK 140
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 122/140 (87%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYP 60
MSSP +R E D+MKL+MSDY+V ++ND +QEFYV F GP+E+PY GG+W++ VELP YP
Sbjct: 1 MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+KSPSIGFVN+I+HPNIDE+SGSVCLDVINQTWSPMFD++N+FEVFLPQLL YPN SDPL
Sbjct: 61 WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120
Query: 121 NGEAAALLMRDRAAYEQRVK 140
NGEAAALL+R+ Y +V+
Sbjct: 121 NGEAAALLLREPNTYYAKVR 140
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC8 PE=1 SV=2
Length = 218
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 113/140 (80%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYP 60
MSS +R E D+MKL+MSD++V++IND +QEF+V F GP ++PY GVWR+ VELPD YP
Sbjct: 1 MSSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYP 60
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
YKSPSIGFVNKI+HPNID SGS+CLDVIN TWSP++DL+N+ E +P LL PN SDPL
Sbjct: 61 YKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPL 120
Query: 121 NGEAAALLMRDRAAYEQRVK 140
N EAA L +RD+ YE+++K
Sbjct: 121 NNEAATLQLRDKKLYEEKIK 140
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 113/143 (79%), Gaps = 4/143 (2%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V F GP +PY GGVW++RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPNIDE SG+VCLDVINQTW+ ++DL N+FE FLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGEAAALLMRDRAAYEQRVK 140
DPLNG+AAA+ + Y+Q++K
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIK 142
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 113/143 (79%), Gaps = 4/143 (2%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V F GP +PY GGVW++RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPNIDE SG+VCLDVINQTW+ ++DL N+FE FLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGEAAALLMRDRAAYEQRVK 140
DPLNG+AAA+ + Y+Q++K
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIK 142
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1
Length = 183
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 113/143 (79%), Gaps = 4/143 (2%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V F GP +PY GGVW++RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPNIDE SG+VCLDVINQTW+ ++DL N+FE FLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGEAAALLMRDRAAYEQRVK 140
DPLNG+AAA+ + Y+Q++K
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIK 142
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEM----INDGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
M++PS+RR M K + D + D I + GP E+P+ G +++ +E
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ F++K++HPN+ GS+CLD++ WSP +D+ + + LL PNP
Sbjct: 61 EEYPNKPPTVKFISKMFHPNV-YADGSICLDILQNRWSPTYDVAAIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N AA L +R YE+RV+ I
Sbjct: 119 NSPANSLAAQLYQENRREYEKRVQQI 144
>sp|Q94490|UBCB_DICDI Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum
GN=ubcB PE=1 SV=1
Length = 148
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 10 MDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFV 69
D++K S +++D +Q++ QGP SP+ GV+ + +++P YP+K P++ F
Sbjct: 12 TDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFT 71
Query: 70 NKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLM 129
KIYHPNI G++C +V + TWSP +++V + +L PNP +PL E A
Sbjct: 72 TKIYHPNIKTSDGAICAEVFS-TWSPQLKILDVLTT-IRSILTDPNPDNPLETEIAQQFK 129
Query: 130 RDRAAYEQRVK 140
DR A+ + K
Sbjct: 130 TDRNAFNKTAK 140
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8
PE=1 SV=1
Length = 148
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQ----GPNESPYHGGVWRIRVELPDAYP 60
+ +R + +K + D + E H+Q GP ESPY GGV+ + + P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+K P + F K++HPNI+ +GS+CLD++ + WSP + V + + LL PNP DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPL 119
Query: 121 NGEAAALLMRDRAAYEQRVK 140
E A + DRA YE +
Sbjct: 120 VPEIAHMYKTDRAKYEATAR 139
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2
SV=1
Length = 148
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQ----GPNESPYHGGVWRIRVELPDAYP 60
+ +R + +K + D + E H+Q GP +SPY GGV+ + + P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYP 61
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+K P + F K++HPNI+ +GS+CLD++ + WSP + V + + LL PNP DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPL 119
Query: 121 NGEAAALLMRDRAAYEQRVKG 141
E A + DRA YE +
Sbjct: 120 VPEIAHMYKTDRAKYETTARS 140
>sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28
PE=2 SV=1
Length = 148
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQ----GPNESPYHGGVWRIRVELPDAYP 60
+ +R + +K + D + E H+Q GP++SPY GGV+ + + P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+K P + F K++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL
Sbjct: 62 FKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPL 119
Query: 121 NGEAAALLMRDRAAYEQRVKG 141
E A + DRA YE +
Sbjct: 120 VPEIAHMYKTDRAKYESTARS 140
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEM----INDGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P++RR M K + D + ++ I + GP+++P+ G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV+K++HPN+ G +CLD++ WSP +D+ + + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKVFHPNV-YADGGICLDILQNRWSPTYDVSAIL-TSIQSLLSDPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N AA L +R YE+RVK
Sbjct: 119 NSPANSTAAQLYKENRREYEKRVKAC 144
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P++RR M K + D V + + I ++ GP +P+ G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ F++K++HPN+ GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N +AA L ++ YE+RV I
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAI 144
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P++RR M K + D V + + I ++ GP +P+ G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ F++K++HPN+ GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N +AA L ++ YE+RV I
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAI 144
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P++RR M K + D V + + I ++ GP +P+ G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ F++K++HPN+ GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N +AA L ++ YE+RV I
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAI 144
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P++RR M K + D V + + I ++ GP +P+ G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ F++K++HPN+ GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N +AA L ++ YE+RV I
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAI 144
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P++RR M K + D V + + I ++ GP +P+ G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ F++K++HPN+ GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N +AA L ++ YE+RV I
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAI 144
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQ----GPNESPYHGGVWRIRVELPDAYP 60
+ +R + +K + D + E H+Q GP ESPY GGV+ + + P YP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+K P + F K+YHPNI+ +GS+CLD++ + WSP + V + + LL PNP DPL
Sbjct: 62 FKPPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPL 119
Query: 121 NGEAAALLMRDRAAYEQRVKG 141
E A + DR+ YE +
Sbjct: 120 VPEIAHMYKTDRSKYESTARS 140
>sp|P0CS16|UBC2_CRYNJ Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=UBC2 PE=3 SV=1
Length = 169
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+ +KRR + K + SD + + D I + GP E+P+ G +R+ +
Sbjct: 1 MSTAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
DAYP K P++ F++K++HPNI +G +CLD++ WSP +D+ + + LL PNP
Sbjct: 61 DAYPNKPPTVRFISKMFHPNI-YANGELCLDILQNRWSPTYDVAAIL-TSVQSLLNDPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVK 140
+ P N +AA L + YE+RVK
Sbjct: 119 ASPANVDAAQLFKENLKEYERRVK 142
>sp|P0CS17|UBC2_CRYNB Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=UBC2 PE=3 SV=1
Length = 169
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+ +KRR + K + SD + + D I + GP E+P+ G +R+ +
Sbjct: 1 MSTAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
DAYP K P++ F++K++HPNI +G +CLD++ WSP +D+ + + LL PNP
Sbjct: 61 DAYPNKPPTVRFISKMFHPNI-YANGELCLDILQNRWSPTYDVAAIL-TSVQSLLNDPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVK 140
+ P N +AA L + YE+RVK
Sbjct: 119 ASPANVDAAQLFKENLKEYERRVK 142
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC5 PE=1 SV=1
Length = 148
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GP++SPY GGV+ + + P YP+K P + F KIYHPNI+ SG++
Sbjct: 27 VGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINS-SGNI 85
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVK 140
CLD++ WSP L V + + LL NP DPL E A + D+A YE K
Sbjct: 86 CLDILKDQWSPALTLSKVL-LSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAK 140
>sp|Q8S919|UBC5B_ORYSJ Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica
GN=UBC5B PE=2 SV=1
Length = 148
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQ----GPNESPYHGGVWRIRVELPDAYP 60
+ +R + +K + D + E H+Q GP++SPY GGV+ + + P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYP 61
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+K P + K++HPNI+ +GS+CLD++ + WSP + V + + LL PNP DPL
Sbjct: 62 FKPPKVALKTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPL 119
Query: 121 NGEAAALLMRDRAAYEQRVKG 141
E A + DRA YE +
Sbjct: 120 VPEIAHMYKTDRAKYESTARS 140
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P++RR M K + D + + I + GP +P+ G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV+K++HPN+ GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N +AA L ++ YE+RV I
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAI 144
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMIN----DGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P++RR M K + D + + I + GP +P+ G +++ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV+K++HPN+ GS+CLD++ WSP +D+ ++ + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNV-YADGSICLDILQNRWSPTYDVSSIL-TSIQSLLDEPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N +AA L ++ YE+RV I
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAI 144
>sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10
PE=1 SV=1
Length = 148
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQ----GPNESPYHGGVWRIRVELPDAYP 60
+ +R + +K + D + E H+Q GP+ESPY GGV+ + + P YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+K P + F K++HPNI+ +GS+CLD++ + WSP + V + + LL PNP DPL
Sbjct: 62 FKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPL 119
Query: 121 NGEAAALLMRDRAAYEQRVKG 141
E A + D+ YE +
Sbjct: 120 VPEIAHMYKTDKNKYESTARS 140
>sp|O74810|UBC1_SCHPO Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc1 PE=3 SV=2
Length = 217
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 11 DLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVN 70
D+ + + +V IND I F+GP +PY GG + + +E+P YP++ P + F
Sbjct: 15 DVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDT 74
Query: 71 KIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMR 130
KIYHPN+ +G++CLD++ WSP++ + + + L LL P PS+P + + A + ++
Sbjct: 75 KIYHPNVSSQTGAICLDILKDQWSPVYTMKSAL-ISLQSLLCTPEPSNPQDAQVAQVYLQ 133
Query: 131 DRAAYEQRVK 140
+ Y+Q V+
Sbjct: 134 N---YQQFVR 140
>sp|P21734|UBC1_YEAST Ubiquitin-conjugating enzyme E2 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC1 PE=1 SV=1
Length = 215
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 7 RREMDLMKLMMSDYKVEMINDGIQEFYVH-----FQGPNESPYHGGVWRIRVELPDAYPY 61
+R M ++ + D + + + E +H F GP +PY GG + + +E+P YP+
Sbjct: 5 KRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPF 64
Query: 62 KSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLN 121
K P + F K+YHPNI ++G++CLD++ WSP+ L + + L LL P P+DP +
Sbjct: 65 KPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSAL-ISLQALLQSPEPNDPQD 123
Query: 122 GEAAALLMRDRAAYEQ 137
E A +RDR ++ +
Sbjct: 124 AEVAQHYLRDRESFNK 139
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 85/146 (58%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMI----NDGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P+++R M K + D + ++ I + GP+++P+ GG +++ ++
Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV++++HPNI GS+CLD++ WSP++D+ + + LL PNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N EAA + ++ Y +RV+ +
Sbjct: 119 NSPANSEAARMFSENKREYNRRVREV 144
>sp|A5PKP9|UB2D4_XENLA Ubiquitin-conjugating enzyme E2 D4 OS=Xenopus laevis GN=ube2d4 PE=1
SV=1
Length = 147
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 6 KRREMDLMKLMMSDYKVEMINDGIQEFYVHFQ----GPNESPYHGGVWRIRVELPDAYPY 61
KR + +LM L D + + E H+Q GPN+SP+ GGV+ + + P YP+
Sbjct: 4 KRIQKELMDLQ-RDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPF 62
Query: 62 KSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLN 121
K P + F KIYHPNI+ +GS+CLD++ WSP + V + + LL PNP DPL
Sbjct: 63 KPPKVAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVL-LSICSLLCDPNPDDPLV 120
Query: 122 GEAAALLMRDRAAYEQRVK 140
E A DR Y + +
Sbjct: 121 PEIAHTYKADREKYNRLAR 139
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 26 NDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSVC 85
+D ++ F V +GP +SPY G++ + + LPD YP ++P + F+ KIYHPNID + G +C
Sbjct: 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRL-GRIC 87
Query: 86 LDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVK 140
LDV+ WSP + V + + LL PNP+DPL + A +++ + + +
Sbjct: 88 LDVLKTNWSPALQIRTVL-LSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAR 141
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F KIYHPNI+ +GS+
Sbjct: 26 VGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVK 140
CLD++ WSP + V + + LL PNP DPL E A DR Y + +
Sbjct: 85 CLDILRSQWSPALTVSKVL-LSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAR 139
>sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana GN=UBC29
PE=2 SV=1
Length = 148
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQ----GPNESPYHGGVWRIRVELPDAYP 60
+ RR + +K + D V E H+Q GPNESPY GGV+ + + P YP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 61 YKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPL 120
+K P + F K++HPNI+ +G++CLD++ WSP + V + + LL PNP DPL
Sbjct: 62 FKPPKVVFRTKVFHPNINS-NGNICLDILKDQWSPALTISKVL-LSICSLLTDPNPDDPL 119
Query: 121 NGEAAALLMRDRAAYEQRVKG 141
E A + D+ YE +
Sbjct: 120 VPEIAHIYKTDKTKYEAMARS 140
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1
SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GP ESPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVK 140
CLD++ WSP + V + + LL PNP DPL E A + DR Y Q +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAR 139
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMI----NDGIQEFYVHFQGPNESPYHGGVWRIRVELP 56
MS+P+++R M K + D + ++ I + GP+++P+ GG +++ ++
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116
+ YP K P++ FV++++HPNI GS+CLD++ WSP++D+ + + LL PNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNP 118
Query: 117 SDPLNGEAAALLMRDRAAYEQRVKGI 142
+ P N EAA + + Y +RV+ +
Sbjct: 119 NSPANSEAARMFSESKREYNRRVREV 144
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 7 RREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSI 66
R DL K S + D + + GP +SPY GGV+ + + P YP+K P +
Sbjct: 8 RELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKV 67
Query: 67 GFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAA 126
F +IYHPNI+ +GS+CLD++ WSP + V + + LL PNP DPL E A
Sbjct: 68 NFTTRIYHPNINS-NGSICLDILRDQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAH 125
Query: 127 LLMRDRAAYEQRVK 140
+ DR+ YE +
Sbjct: 126 VYKTDRSRYELSAR 139
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3
PE=2 SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 25 INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSV 84
+ D + + GPN+SPY GGV+ + + P YP+K P + F +IYHPNI+ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQ 137
CLD++ WSP + V + + LL PNP DPL E A + DR Y +
Sbjct: 85 CLDILRSQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
>sp|O74549|UBC12_SCHPO NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ubc12 PE=3 SV=1
Length = 177
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Query: 27 DGIQEFYVHFQ-GPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSVC 85
D I+ +H + P+E Y GG ++ R+++ D YP+ P + +NKIYHPNID + G+VC
Sbjct: 47 DPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNID-IEGNVC 105
Query: 86 LDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVK 140
L+++ Q W+P+ +L ++ V L L L PN DPLN EAAA L +D + RV+
Sbjct: 106 LNILRQDWNPVLNLNSIL-VGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,077,285
Number of Sequences: 539616
Number of extensions: 2569483
Number of successful extensions: 5056
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 4411
Number of HSP's gapped (non-prelim): 351
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)