Query 031754
Match_columns 153
No_of_seqs 127 out of 1075
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:23:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.5E-50 5E-55 296.0 18.6 146 1-148 1-150 (169)
2 2aak_A UBC1, ubiquitin conjuga 100.0 3.1E-50 1.1E-54 290.0 18.5 145 1-147 1-149 (152)
3 2c2v_B Ubiquitin-conjugating e 100.0 1.3E-50 4.4E-55 292.5 15.4 145 1-147 2-150 (154)
4 4gpr_A Ubiquitin-conjugating e 100.0 6.3E-50 2.1E-54 288.1 18.3 142 4-147 5-149 (151)
5 1zdn_A Ubiquitin-conjugating e 100.0 2.7E-50 9.1E-55 292.0 16.2 141 4-146 14-157 (158)
6 2bep_A Ubiquitin-conjugating e 100.0 5.3E-50 1.8E-54 290.7 17.6 146 1-147 5-157 (159)
7 2ayv_A Ubiquitin-conjugating e 100.0 1.2E-49 4.2E-54 290.4 18.7 141 4-146 22-165 (166)
8 2ucz_A UBC7, ubiquitin conjuga 100.0 8.5E-50 2.9E-54 291.2 17.2 144 1-146 1-162 (165)
9 3k9o_A Ubiquitin-conjugating e 100.0 1.3E-49 4.3E-54 298.5 17.9 148 1-149 2-156 (201)
10 2r0j_A Ubiquitin carrier prote 100.0 1E-49 3.5E-54 286.4 16.5 141 5-147 3-146 (149)
11 2onu_A Ubiquitin-conjugating e 100.0 1E-50 3.5E-55 292.4 10.8 150 3-152 2-151 (152)
12 1z2u_A Ubiquitin-conjugating e 100.0 2.5E-49 8.7E-54 284.6 18.0 142 4-147 5-149 (150)
13 1fxt_A Ubiquitin-conjugating e 100.0 6E-50 2E-54 287.6 14.5 143 4-147 2-148 (149)
14 2e2c_A Ubiquitin conjugating e 100.0 3.1E-49 1E-53 285.9 18.2 141 4-147 10-153 (156)
15 2c4o_A Ubiquitin-conjugating e 100.0 3.7E-49 1.3E-53 287.7 18.4 142 4-147 20-164 (165)
16 3h8k_A Ubiquitin-conjugating e 100.0 3.9E-49 1.3E-53 287.4 18.3 143 3-147 3-162 (164)
17 1jat_A Ubiquitin-conjugating e 100.0 1.7E-49 5.7E-54 287.0 15.6 145 2-148 4-151 (155)
18 2gjd_A Ubiquitin-conjugating e 100.0 7.6E-49 2.6E-53 284.0 17.6 144 1-146 1-155 (157)
19 1yh2_A HSPC150 protein similar 100.0 1.3E-48 4.5E-53 285.8 18.5 143 4-148 5-154 (169)
20 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1E-48 3.5E-53 291.3 17.9 143 4-147 33-191 (193)
21 3bzh_A Ubiquitin-conjugating e 100.0 6.8E-49 2.3E-53 292.6 16.7 142 4-147 49-193 (194)
22 2pwq_A Ubiquitin conjugating e 100.0 6.1E-49 2.1E-53 297.0 16.6 144 4-148 24-170 (216)
23 1i7k_A Ubiquitin-conjugating e 100.0 7.8E-49 2.7E-53 289.0 16.4 141 4-147 31-174 (179)
24 3rcz_B SUMO-conjugating enzyme 100.0 1.6E-48 5.4E-53 283.8 17.8 142 4-147 11-162 (163)
25 2grr_A Ubiquitin-conjugating e 100.0 2E-48 6.8E-53 282.9 16.9 145 1-147 4-159 (161)
26 3e46_A Ubiquitin-conjugating e 100.0 2.6E-48 8.9E-53 299.4 17.8 147 1-148 54-207 (253)
27 1yrv_A Ubiquitin-conjugating l 100.0 1.2E-48 4.1E-53 285.8 14.9 143 1-145 20-168 (169)
28 1y8x_A Ubiquitin-conjugating e 100.0 6.6E-48 2.2E-52 279.8 17.2 142 1-145 4-147 (160)
29 2z5d_A Ubiquitin-conjugating e 100.0 1E-48 3.5E-53 288.1 12.0 144 4-148 26-169 (179)
30 1wzv_A Ubiquitin-conjugating e 100.0 1E-47 3.6E-52 277.6 16.5 142 4-148 5-151 (155)
31 3rz3_A Ubiquitin-conjugating e 100.0 1.2E-47 4E-52 284.0 16.6 145 1-147 3-172 (183)
32 1tte_A Ubiquitin-conjugating e 100.0 3.4E-48 1.2E-52 292.7 12.0 145 2-147 1-149 (215)
33 3fn1_B NEDD8-conjugating enzym 100.0 3.7E-47 1.3E-51 277.7 16.6 142 2-146 13-165 (167)
34 2y9m_A Ubiquitin-conjugating e 100.0 4.4E-47 1.5E-51 278.4 16.9 146 1-147 3-167 (172)
35 2nvu_C NEDD8-conjugating enzym 100.0 4.5E-47 1.5E-51 280.0 16.7 139 4-145 27-167 (180)
36 2awf_A Ubiquitin-conjugating e 100.0 2.7E-47 9.3E-52 279.5 13.9 137 4-142 18-172 (172)
37 1yf9_A Ubiquitin carrier prote 100.0 3.5E-47 1.2E-51 278.5 12.8 143 4-147 13-155 (171)
38 3o2u_A NEDD8-conjugating enzym 100.0 4.8E-46 1.6E-50 276.6 16.1 141 2-145 28-176 (190)
39 1c4z_D UBCH7, ubiquitin conjug 100.0 1.2E-46 4.2E-51 271.7 12.0 142 4-148 3-149 (154)
40 4ds2_A Ubiquitin-conjugating e 100.0 2.3E-45 7.7E-50 268.2 13.1 140 1-141 5-164 (167)
41 4ddg_A Ubiquitin-conjugating e 100.0 1.4E-44 4.7E-49 295.2 18.0 144 3-148 3-149 (399)
42 2fo3_A Ubiquitin-conjugating e 100.0 1.8E-41 6.1E-46 236.9 12.5 116 1-118 4-123 (125)
43 2q0v_A Ubiquitin-conjugating e 100.0 1.3E-41 4.5E-46 245.5 9.7 126 3-131 21-156 (156)
44 3ceg_A Baculoviral IAP repeat- 100.0 7.7E-41 2.6E-45 264.6 14.2 141 4-146 77-241 (323)
45 1jat_B Ubiquitin-conjugating e 100.0 7.4E-42 2.5E-46 242.6 6.5 126 1-128 2-138 (138)
46 2h2y_A Ubiquitin-conjugating e 100.0 3.1E-40 1.1E-44 233.6 14.2 114 1-116 18-135 (136)
47 2a4d_A Ubiquitin-conjugating e 100.0 2.4E-40 8.3E-45 239.6 11.8 121 4-125 26-156 (160)
48 2a7l_A Hypothetical ubiquitin- 100.0 1.9E-39 6.5E-44 229.4 11.8 110 1-112 20-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 8.4E-40 2.9E-44 239.0 8.6 121 4-125 36-166 (170)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.6E-36 5.3E-41 224.9 15.1 132 4-139 15-155 (187)
51 1zuo_A Hypothetical protein LO 100.0 3E-38 1E-42 233.9 5.0 136 1-146 24-180 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 4.1E-29 1.4E-33 179.1 -0.1 101 5-109 34-149 (172)
53 3r3q_A Suppressor protein STP2 99.8 5.7E-20 2E-24 132.5 8.7 110 6-118 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 4.6E-20 1.6E-24 129.6 1.8 103 5-111 36-153 (168)
55 3obq_A Tumor susceptibility ge 99.5 4.8E-14 1.6E-18 100.0 7.7 78 27-112 51-137 (146)
56 2ebm_A RWD domain-containing p 96.6 0.0071 2.4E-07 40.9 6.7 68 1-70 8-78 (128)
57 2yz0_A Serine/threonine-protei 94.4 0.12 4.1E-06 35.2 6.4 41 29-70 45-85 (138)
58 2day_A Ring finger protein 25; 94.3 0.15 5.2E-06 34.1 6.6 65 6-70 11-82 (128)
59 2ebk_A RWD domain-containing p 93.8 0.14 4.9E-06 34.4 5.7 41 29-70 39-79 (128)
60 3zqs_A E3 ubiquitin-protein li 93.7 0.6 2E-05 33.8 9.0 82 7-111 5-86 (186)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 92.0 0.093 3.2E-06 35.7 2.7 40 29-69 44-85 (137)
62 2daw_A RWD domain containing p 91.5 0.33 1.1E-05 33.8 5.2 23 48-70 76-98 (154)
63 2dax_A Protein C21ORF6; RWD do 91.2 0.18 6E-06 35.1 3.4 25 47-71 73-97 (152)
64 2cwb_A Chimera of immunoglobul 75.7 0.56 1.9E-05 31.0 0.0 31 114-144 21-51 (108)
65 3rls_A YAF9, protein AF-9 homo 41.2 76 0.0026 22.5 5.9 45 27-73 30-74 (175)
66 3qrl_A Transcription initiatio 32.2 1.2E+02 0.0041 20.6 5.6 44 29-74 32-78 (140)
67 2f4m_B UV excision repair prot 25.3 73 0.0025 18.4 3.0 20 120-139 37-56 (61)
68 2jrw_A Cyclic extended PEP.1; 24.8 23 0.0008 16.4 0.6 15 61-75 5-19 (26)
69 1pve_A HHR23B, UV excision rep 23.5 74 0.0025 19.1 2.9 21 120-140 39-59 (72)
70 2bum_A Protocatechuate 3,4-dio 22.9 80 0.0027 22.9 3.6 25 45-69 109-138 (209)
71 2cu9_A Spcia1, histone chapero 22.6 2E+02 0.0068 20.0 6.1 38 28-65 36-86 (161)
72 2ccv_A Helix pomatia agglutini 21.5 1.3E+02 0.0045 18.9 4.0 25 46-71 28-52 (101)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-50 Score=296.02 Aligned_cols=146 Identities=28% Similarity=0.649 Sum_probs=139.3
Q ss_pred CCC-HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccc
Q 031754 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpn 76 (153)
||+ +.+||++|++++ +++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 886 789999999965 7889999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 77 v~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
|+. +|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+||++++.
T Consensus 81 I~~-~G~ICl~iL~~~WsP~~~i~~vL~s-i~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 81 VYA-NGEICLDILQNRWTPTYDVASILTS-IQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp BCT-TSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCeEeehhhccCCCCcCcHHHHHHH-HHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 995 9999999999999999999999999 999999999999999999999999999999999999997654
No 2
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=3.1e-50 Score=289.98 Aligned_cols=145 Identities=30% Similarity=0.689 Sum_probs=139.3
Q ss_pred CCC-HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccc
Q 031754 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpn 76 (153)
||+ +.+||++|++++ +++|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 886 789999999965 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 77 v~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
|+. +|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 81 v~~-~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a 149 (152)
T 2aak_A 81 IYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSW 149 (152)
T ss_dssp BCT-TSBBCCGGGTTSCCTTCCHHHHHHH-HHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCC-CCEEechhhcCCCCCCCcHHHHHHH-HHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 995 9999999999999999999999999 99999999999999999999999999999999999999654
No 3
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-50 Score=292.48 Aligned_cols=145 Identities=30% Similarity=0.615 Sum_probs=136.2
Q ss_pred CCC-HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccc
Q 031754 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpn 76 (153)
||. +.+||++|++++ +++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 444 679999999965 7889999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 77 v~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
|+. +|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+||++++
T Consensus 82 v~~-~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a 150 (154)
T 2c2v_B 82 VDK-LGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYA 150 (154)
T ss_dssp BCT-TCBBCCHHHHTSCCTTCCHHHHHHH-HHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred Ccc-CCeEEchhccCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 995 8999999999999999999999999 99999999999999999999999999999999999999654
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=6.3e-50 Score=288.07 Aligned_cols=142 Identities=32% Similarity=0.714 Sum_probs=137.0
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~- 83 (151)
T 4gpr_A 5 AMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK- 83 (151)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC-
Confidence 789999999965 7889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya 149 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLS-ISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYA 149 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCEEEcccccCCCCCCCcHHHHHHH-HHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999 99999999999999999999999999999999999999653
No 5
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-50 Score=291.96 Aligned_cols=141 Identities=27% Similarity=0.568 Sum_probs=136.2
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ +++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 92 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGA- 92 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCC-
Confidence 679999999965 7889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFL 146 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~ 146 (153)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+||+++
T Consensus 93 ~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~ 157 (158)
T 1zdn_A 93 NGEICVNVLKRDWTAELGIRHVLLT-IKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 157 (158)
T ss_dssp TSBBCHHHHTTTCCTTCCHHHHHHH-HHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEehhhcCCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999 9999999999999999999999999999999999999965
No 6
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=5.3e-50 Score=290.69 Aligned_cols=146 Identities=26% Similarity=0.652 Sum_probs=138.8
Q ss_pred CCC-HHHHHHHHHHhC------CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcc
Q 031754 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l------~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 73 (153)
|++ +.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 664 789999999976 3679999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 74 Hpnv~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
||||+..+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a 157 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 157 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 99999558999999999999999999999999 99999999999999999999999999999999999999664
No 7
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-49 Score=290.38 Aligned_cols=141 Identities=35% Similarity=0.714 Sum_probs=136.4
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ +++|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 22 ~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~- 100 (166)
T 2ayv_A 22 ALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS- 100 (166)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC-
Confidence 689999999965 7889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFL 146 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~ 146 (153)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~ 165 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLS-ISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKY 165 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCeEEcccccccCCCCCcHHHHHHH-HHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 9999999999999999999999999999999999999965
No 8
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=8.5e-50 Score=291.19 Aligned_cols=144 Identities=28% Similarity=0.494 Sum_probs=136.5
Q ss_pred CCC-HHHHHHHHHHhC---CCCCcEEEecC-CCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcccc
Q 031754 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHP 75 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~~~~~~v~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hp 75 (153)
||+ +.+||++|++++ +++|+++.+.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 776 789999999965 78899999976 6999999999999999999999999999999999999999999999999
Q ss_pred ceeCCCCceEcccc-------------cCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 031754 76 NIDEMSGSVCLDVI-------------NQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGI 142 (153)
Q Consensus 76 nv~~~~G~icl~~l-------------~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~ 142 (153)
||+. +|.||+++| .++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|
T Consensus 81 Nv~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~ 158 (165)
T 2ucz_A 81 NIYP-NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLS-VMSMLSEPNIESGANIDACILWRDNRPEFERQVKLS 158 (165)
T ss_dssp TBCT-TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHH-HHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCCC-CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHH
Confidence 9995 999999999 6899999999999999 999999999999999999999999999999999999
Q ss_pred HHHh
Q 031754 143 EHFL 146 (153)
Q Consensus 143 ~~~~ 146 (153)
|++.
T Consensus 159 ~~~~ 162 (165)
T 2ucz_A 159 ILKS 162 (165)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9965
No 9
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.3e-49 Score=298.53 Aligned_cols=148 Identities=26% Similarity=0.642 Sum_probs=139.0
Q ss_pred CCC-HHHHHHHHHHhC------CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcc
Q 031754 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l------~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 73 (153)
||+ +.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 776 899999999976 2579999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhhc
Q 031754 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYHS 149 (153)
Q Consensus 74 Hpnv~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~~ 149 (153)
||||+..+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++..
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHH-HHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999559999999999999999999999999 9999999999999999999999999999999999999976543
No 10
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1e-49 Score=286.35 Aligned_cols=141 Identities=29% Similarity=0.657 Sum_probs=135.7
Q ss_pred HHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCCC
Q 031754 5 SKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMS 81 (153)
Q Consensus 5 ~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~ 81 (153)
.+||++|++++ +++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~ 81 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK-L 81 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-T
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC-C
Confidence 58999999965 7889999999999999999999999999999999999999999999999999999999999995 8
Q ss_pred CceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 82 GSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a 146 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLS-IQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYA 146 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHH-HHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred CEEechhcCCCCCCCCcHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999 99999999999999999999999999999999999999654
No 11
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1e-50 Score=292.38 Aligned_cols=150 Identities=57% Similarity=1.079 Sum_probs=141.2
Q ss_pred CHHHHHHHHHHhCCCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCCCC
Q 031754 3 SPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSG 82 (153)
Q Consensus 3 ~~~~Rl~~el~~l~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G 82 (153)
++.+||++|++++...|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+..+|
T Consensus 2 sa~~Rl~kEl~~l~~~~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G 81 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMAGYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASG 81 (152)
T ss_dssp -CCCHHHHTHHHHHHHTCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTC
T ss_pred hHHHHHHHHHHhcCcCCCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCC
Confidence 46799999999987789999999999999999999999999999999999999999999999999999999999995589
Q ss_pred ceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhhccCC
Q 031754 83 SVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYHSLQW 152 (153)
Q Consensus 83 ~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 152 (153)
.||+++|.++|+|++++.+||.++|++||.+|++++|+|.+||++|++|+++|.++||+++++++....|
T Consensus 82 ~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~~~~ 151 (152)
T 2onu_A 82 SVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASKDLW 151 (152)
T ss_dssp BBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCGGGG
T ss_pred eEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccCccc
Confidence 9999999999999999999998856899999999999999999999999999999999999987766655
No 12
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.5e-49 Score=284.62 Aligned_cols=142 Identities=35% Similarity=0.685 Sum_probs=136.6
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ +++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 83 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 83 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC-
Confidence 689999999965 7789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a 149 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYA 149 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEeeccccCCCCCCCCHHHHHHH-HHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 99999999999999999999999999999999999999653
No 13
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=6e-50 Score=287.61 Aligned_cols=143 Identities=31% Similarity=0.681 Sum_probs=136.3
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCC-CceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMIND-GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 79 (153)
+.+||++|++++ +++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 459999999975 678999999987 9999999999999999999999999999999999999999999999999995
Q ss_pred CCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 80 MSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 80 ~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
.+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a 148 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALIS-LQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 148 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHH-HHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 59999999999999999999999999 99999999999999999999999999999999999999653
No 14
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-49 Score=285.86 Aligned_cols=141 Identities=28% Similarity=0.573 Sum_probs=135.9
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 10 ~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 88 (156)
T 2e2c_A 10 VSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ- 88 (156)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc-
Confidence 789999999976 7889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++| +|+++|.++||+|+++++
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~s-i~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~ 153 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRTILLS-LQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQ 153 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred CceEECccccccCCCCCcHHHHHHH-HHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999 9999999999999999999999 899999999999999653
No 15
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=3.7e-49 Score=287.67 Aligned_cols=142 Identities=34% Similarity=0.685 Sum_probs=136.6
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ ++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 20 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~- 98 (165)
T 2c4o_A 20 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 98 (165)
T ss_dssp HHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC-
Confidence 689999999965 6789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~s-i~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a 164 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 164 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHH-HHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 99999999999999999999999999999999999999643
No 16
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=3.9e-49 Score=287.44 Aligned_cols=143 Identities=23% Similarity=0.441 Sum_probs=136.2
Q ss_pred CHHHHHHHHHHhC---CCCCcEEEecCC-CceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcccccee
Q 031754 3 SPSKRREMDLMKL---MMSDYKVEMIND-GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNID 78 (153)
Q Consensus 3 ~~~~Rl~~el~~l---~~~~~~v~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~ 78 (153)
++.+||++|++++ ++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~ 82 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIY 82 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCC
Confidence 3789999999965 788999999876 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEccccc-------------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 031754 79 EMSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHF 145 (153)
Q Consensus 79 ~~~G~icl~~l~-------------~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~ 145 (153)
. +|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++
T Consensus 83 ~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~-i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 160 (164)
T 3h8k_A 83 P-DGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLS-VVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 160 (164)
T ss_dssp T-TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHH-HHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred C-CCcEeeecccCcccccccccccccCCCCCCcHHHHHHH-HHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 5 9999999997 789999999999999 999999999999999999999999999999999999997
Q ss_pred hh
Q 031754 146 LY 147 (153)
Q Consensus 146 ~~ 147 (153)
..
T Consensus 161 s~ 162 (164)
T 3h8k_A 161 SL 162 (164)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 17
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.7e-49 Score=286.96 Aligned_cols=145 Identities=33% Similarity=0.666 Sum_probs=138.1
Q ss_pred CCHHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcccccee
Q 031754 2 SSPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNID 78 (153)
Q Consensus 2 ~~~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~ 78 (153)
+.+.+||++|++++ +++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 34679999999965 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 79 EMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
.+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 84 -~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~ 151 (155)
T 1jat_A 84 -RLGRICLDVLKTNWSPALQIRTVLLS-IQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAK 151 (155)
T ss_dssp -TTCCBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSE
T ss_pred -CCCEEEchhhccCCCCCCCHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 59999999999999999999999999 999999999999999999999999999999999999997643
No 18
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=7.6e-49 Score=284.03 Aligned_cols=144 Identities=29% Similarity=0.527 Sum_probs=135.0
Q ss_pred CCC-HHHHHHHHHHhC---CCCCcEEEecC-----CCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecC
Q 031754 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-----DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK 71 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~~~~~~v~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~ 71 (153)
||+ +.+||++|++++ +++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 776 789999999865 78899998875 389999999999999999999999999999999999999999999
Q ss_pred ccccceeCCCCceEcccccC--CCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHh
Q 031754 72 IYHPNIDEMSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFL 146 (153)
Q Consensus 72 i~Hpnv~~~~G~icl~~l~~--~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~ 146 (153)
+|||||+ .+|.||+++|.. +|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 81 i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~ 155 (157)
T 2gjd_A 81 FYHPNVY-PSGTICLSILNEDQDWRPAITLKQIVLG-VQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQY 155 (157)
T ss_dssp CCCTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred CccCCCC-CCCcEeeecccCCCCCCCCCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 9999999 499999999987 79999999999999 9999999999999999999999999999999999999964
No 19
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-48 Score=285.82 Aligned_cols=143 Identities=27% Similarity=0.589 Sum_probs=137.2
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~-~ 83 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNID-S 83 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC-T
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCC-c
Confidence 789999999965 778999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCceEccccc----CCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 81 SGSVCLDVIN----QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 81 ~G~icl~~l~----~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
+|.||+++|. ++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 84 ~G~iCl~iL~~~~~~~W~p~~~i~~vL~s-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 84 AGRICLDVLKLPPKGAWRPSLNIATVLTS-IQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp TCBBCCGGGSCTTTSCCCTTSCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCeEecccccCCcccCCCCCCcHHHHHHH-HHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 9999999998 899999999999999 999999999999999999999999999999999999996643
No 20
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1e-48 Score=291.32 Aligned_cols=143 Identities=27% Similarity=0.614 Sum_probs=134.8
Q ss_pred HHHHHHHHHHhC---CC-------------CCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceE
Q 031754 4 PSKRREMDLMKL---MM-------------SDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIG 67 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~-------------~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~ 67 (153)
+.+||++|++++ ++ .|+++.+.++|++.|+++|.||++|||+||+|+++|.||++||++||+|+
T Consensus 33 a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~ 112 (193)
T 2f4z_A 33 EQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMK 112 (193)
T ss_dssp HHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEE
Confidence 678999999975 33 69999999999999999999999999999999999999999999999999
Q ss_pred EecCccccceeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 68 FVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 68 f~t~i~Hpnv~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
|.|+||||||+..+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 113 F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 113 FVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLS-IQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 99999999999558999999999999999999999999 99999999999999999999999999999999999999654
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=6.8e-49 Score=292.62 Aligned_cols=142 Identities=30% Similarity=0.569 Sum_probs=136.6
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ +++|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|++|||||+.
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~- 127 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS- 127 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC-
Confidence 689999999965 6789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 128 ~G~ICL~iL~~~WsP~~ti~~vL~s-I~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya 193 (194)
T 3bzh_A 128 QGVICLDILKDNWSPALTISKVLLS-ICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 193 (194)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCceechhhhccCCCcCcHHHHHHH-HHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999 99999999999999999999999999999999999999653
No 22
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=6.1e-49 Score=296.98 Aligned_cols=144 Identities=28% Similarity=0.620 Sum_probs=138.0
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ +++|+++.+.++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 789999999965 67899999999999999999999999999999999999999999999999999999999999955
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~s-I~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALLS-IQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEchhhcccCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999 999999999999999999999999999999999999996654
No 23
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.8e-49 Score=289.01 Aligned_cols=141 Identities=26% Similarity=0.529 Sum_probs=135.8
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||+.
T Consensus 31 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~- 109 (179)
T 1i7k_A 31 VGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT- 109 (179)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc-
Confidence 789999999976 7889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
+|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+||++| +|+++|.++|++++++..
T Consensus 110 ~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~ 174 (179)
T 1i7k_A 110 QGNISLDILKEKWSALYDVRTILLS-IQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQV 174 (179)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTC
T ss_pred CCeEEcccCcCcCCCCCCHHHHHHH-HHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 9999999999999999999999 999999999999999654
No 24
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-48 Score=283.76 Aligned_cols=142 Identities=23% Similarity=0.517 Sum_probs=135.2
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCC-----CceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcccc
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMIND-----GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHP 75 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~-----~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hp 75 (153)
+.+||+||++++ +++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999965 788999999876 899999999999999999999999999999999999999999999999
Q ss_pred ceeCCCCceEcccccC--CCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 76 NIDEMSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 76 nv~~~~G~icl~~l~~--~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
||+ .+|.||+++|.. +|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 91 nV~-~~G~iCl~iL~~~~~W~p~~ti~~vL~~-i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 91 NVY-PSGTVCLSILNEEEGWKPAITIKQILLG-IQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp TBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred CCC-CCCcEeccccCCCCCcCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999 599999999986 49999999999999 99999999999999999999999999999999999999653
No 25
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2e-48 Score=282.90 Aligned_cols=145 Identities=24% Similarity=0.499 Sum_probs=136.4
Q ss_pred CCC-HHHHHHHHHHhC---CCCCcEEEecC-----CCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecC
Q 031754 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-----DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK 71 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~~~~~~v~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~ 71 (153)
|++ +.+||++|++++ ++.|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 665 789999999965 77899998864 589999999999999999999999999999999999999999999
Q ss_pred ccccceeCCCCceEcccccC--CCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 72 IYHPNIDEMSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 72 i~Hpnv~~~~G~icl~~l~~--~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
+|||||+ .+|.||+++|.. +|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+||++++
T Consensus 84 i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a 159 (161)
T 2grr_A 84 LFHPNVY-PSGTVCLSILEEDKDWRPAITIKQILLG-IQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 159 (161)
T ss_dssp CCSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred cccCCCC-CCCeEeehhcCCCCCcCCCCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHh
Confidence 9999999 599999999986 89999999999999 99999999999999999999999999999999999999654
No 26
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.6e-48 Score=299.39 Aligned_cols=147 Identities=26% Similarity=0.644 Sum_probs=139.4
Q ss_pred CCC-HHHHHHHHHHhC------CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcc
Q 031754 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l------~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 73 (153)
|++ +.+||++|++++ ++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 554 789999999976 3679999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 74 Hpnv~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
||||+..+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 134 HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~s-I~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~ 207 (253)
T 3e46_A 134 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 207 (253)
T ss_dssp BTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_pred cCCccCCCCeeecccccCCCCCCCCHHHHHHH-HHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999558999999999999999999999999 999999999999999999999999999999999999997654
No 27
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-48 Score=285.80 Aligned_cols=143 Identities=23% Similarity=0.490 Sum_probs=135.1
Q ss_pred CCC-HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccc
Q 031754 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpn 76 (153)
|++ +.+||++|++++ ++.|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 666 789999999976 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCceEccccc--CCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 031754 77 IDEMSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHF 145 (153)
Q Consensus 77 v~~~~G~icl~~l~--~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~ 145 (153)
|+..+|.||+++|. ++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++ |++|++
T Consensus 100 I~~~~G~ICL~iL~~~~~WsP~~ti~~vL~s-I~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDNPEKWNTNYTLSSILLA-LQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp BCTTTCCBCCHHHHCGGGCCTTCCHHHHHHH-HHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ccCCCCeEeehhhcCCcCCCCcCCHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 93369999999998 899999999999999 99999999999999999999999999999999 998874
No 28
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.6e-48 Score=279.84 Aligned_cols=142 Identities=30% Similarity=0.566 Sum_probs=135.2
Q ss_pred CCCHHHHHHHHHHhC-CCCCcEEE-ecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcccccee
Q 031754 1 MSSPSKRREMDLMKL-MMSDYKVE-MINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNID 78 (153)
Q Consensus 1 M~~~~~Rl~~el~~l-~~~~~~v~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~ 78 (153)
|+.+.+||++|++++ +++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 82 (160)
T 1y8x_A 4 ASAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNID 82 (160)
T ss_dssp CCHHHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred ccHHHHHHHHHHHhcCCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCC
Confidence 455889999999997 56789998 6788999999988 99999999999999999999999999999999999999999
Q ss_pred CCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 031754 79 EMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHF 145 (153)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~ 145 (153)
. +|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||++++.
T Consensus 83 ~-~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 83 L-EGNVCLNILREDWKPVLTINSIIYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp T-TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred C-CCeEEcccchhhccCCCCHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 5 8999999999999999999999999 999999999999999999999999999999999999984
No 29
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-48 Score=288.11 Aligned_cols=144 Identities=56% Similarity=1.071 Sum_probs=136.6
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCCCCc
Q 031754 4 PSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGS 83 (153)
Q Consensus 4 ~~~Rl~~el~~l~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~ 83 (153)
+.+||++|++++.+.|+++.+. +|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+..+|.
T Consensus 26 a~~RL~kEl~~l~~~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ 104 (179)
T 2z5d_A 26 GKRRMDTDVIKLIESKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGT 104 (179)
T ss_dssp HHHHHHHHHHHHHHSSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred HHHHHHHHHHhcCcCCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCe
Confidence 6899999999987789999987 578999999999999999999999999999999999999999999999999955999
Q ss_pred eEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 84 VCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 84 icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
||+++|.++|+|++++.+||.+.|++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 105 ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 105 VCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp BCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred EeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999877999999999999999999999999999999999999996643
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1e-47 Score=277.57 Aligned_cols=142 Identities=29% Similarity=0.550 Sum_probs=135.2
Q ss_pred HHHHHHHHHHhC---CCCCcEE-EecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeC
Q 031754 4 PSKRREMDLMKL---MMSDYKV-EMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v-~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 79 (153)
+.+||++|++++ +++|+++ .+.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 83 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE 83 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCC
Confidence 679999999965 6789999 788899999999999 99999999999999999999999999999999999999995
Q ss_pred CCCceEcccc-cCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 80 MSGSVCLDVI-NQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 80 ~~G~icl~~l-~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
+|.||+++| .++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 84 -~G~iCl~iL~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 151 (155)
T 1wzv_A 84 -NGQICLPIISSENWKPCTKTCQVLEA-LNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGV 151 (155)
T ss_dssp -TCBCCCGGGCTTTCCTTCCHHHHHHH-HHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCE
T ss_pred -CCeEeecCCCccCCCCCCcHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999 8999999999999999 999999999999999999999999999999999999997643
No 31
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.2e-47 Score=283.97 Aligned_cols=145 Identities=26% Similarity=0.547 Sum_probs=134.5
Q ss_pred CCC--HHHHHHHHHHhC---CCCCcEEE-ecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccc
Q 031754 1 MSS--PSKRREMDLMKL---MMSDYKVE-MINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYH 74 (153)
Q Consensus 1 M~~--~~~Rl~~el~~l---~~~~~~v~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~H 74 (153)
|++ +.+||++|++++ ++.|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 544 789999999965 77899999 667899999999999999999999999999999999999999999999999
Q ss_pred cceeCCCCceEccccc-------------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHh------CHHHH
Q 031754 75 PNIDEMSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMR------DRAAY 135 (153)
Q Consensus 75 pnv~~~~G~icl~~l~-------------~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~------~~~~f 135 (153)
|||+. +|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.|||++|++ |+++|
T Consensus 83 PnV~~-~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y 160 (183)
T 3rz3_A 83 PNIYE-TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLS-VISLLNEPNTFSPANVDASVMYRKWKESKGKDREY 160 (183)
T ss_dssp TTBCT-TSBBCCTTC--------------CCCCTTCCHHHHHHH-HHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHH
T ss_pred CCCCC-CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHhcccccccHHHH
Confidence 99995 9999999996 889999999999999 999999999999999999999998 78999
Q ss_pred HHHHHHHHHHhh
Q 031754 136 EQRVKGIEHFLY 147 (153)
Q Consensus 136 ~~~~~~~~~~~~ 147 (153)
+++||++|++..
T Consensus 161 ~~~v~~~v~~s~ 172 (183)
T 3rz3_A 161 TDIIRKQVLGTK 172 (183)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999754
No 32
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=3.4e-48 Score=292.68 Aligned_cols=145 Identities=32% Similarity=0.681 Sum_probs=136.8
Q ss_pred CCHHHHHHHHHHhC---CCCCcEEEecCCC-ceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccce
Q 031754 2 SSPSKRREMDLMKL---MMSDYKVEMINDG-IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNI 77 (153)
Q Consensus 2 ~~~~~Rl~~el~~l---~~~~~~v~~~~~~-~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 77 (153)
|++.+||++|++++ +++|+++.+.++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 1 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 80 (215)
T 1tte_A 1 SSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 80 (215)
T ss_dssp CTTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSS
T ss_pred ChHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcC
Confidence 45789999999865 7889999998764 6699999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 78 DEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 78 ~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
+..+|.||+++|.++|+|++|+.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 81 ~~~~G~ICL~iL~~~WsP~~ti~~VL~s-I~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA 149 (215)
T 1tte_A 81 SSVTGAICLDILRNAWSPVITLKSALIS-LQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 149 (215)
T ss_dssp CSSSSCCCSSTTTCCSCTTCCHHHHHHH-HHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSS
T ss_pred cCCCCEEECccCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 9559999999999999999999999999 99999999999999999999999999999999999999654
No 33
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3.7e-47 Score=277.74 Aligned_cols=142 Identities=30% Similarity=0.519 Sum_probs=133.0
Q ss_pred CCHHHHHHHHHHhC---CCCCcEEEec-CCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccce
Q 031754 2 SSPSKRREMDLMKL---MMSDYKVEMI-NDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNI 77 (153)
Q Consensus 2 ~~~~~Rl~~el~~l---~~~~~~v~~~-~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 77 (153)
+.+.+||++|++++ ++.|+++.+. ++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 33789999999976 6789999865 47899999998 8999999999999999999999999999999999999999
Q ss_pred eCCCCceEcccccC------CCCCCCCHHHHHHHHHHHhhcC-CCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHh
Q 031754 78 DEMSGSVCLDVINQ------TWSPMFDLVNVFEVFLPQLLLY-PNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFL 146 (153)
Q Consensus 78 ~~~~G~icl~~l~~------~W~p~~~i~~il~~~i~~ll~~-p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~ 146 (153)
+ .+|.||+++|.. +|+|++++.+||.+ |++||.+ |++++|+|.|||++|++|+++|.++||+||+++
T Consensus 92 ~-~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~-i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~ 165 (167)
T 3fn1_B 92 T-ETGEICLSLLREHSIDGTGWAPTRTLKDVVWG-LNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRY 165 (167)
T ss_dssp C-TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHH-HHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred C-CCCEEechhhccCCCCCCCCCCcCcHHHHHHH-HHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 9 599999999975 79999999999999 9999999 699999999999999999999999999999965
No 34
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=4.4e-47 Score=278.40 Aligned_cols=146 Identities=24% Similarity=0.472 Sum_probs=133.6
Q ss_pred CCC-HHHHHHHHHHhC-----C------CC---CcEEEe-cCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCC
Q 031754 1 MSS-PSKRREMDLMKL-----M------MS---DYKVEM-INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSP 64 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l-----~------~~---~~~v~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP 64 (153)
||+ +.+||++|++++ + +. ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 665 789999999964 2 22 356777 7789999999999999999999999999999999999999
Q ss_pred ceEEec-CccccceeCCCCceEccccc-CCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHh-CHHHHHHHHHH
Q 031754 65 SIGFVN-KIYHPNIDEMSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMR-DRAAYEQRVKG 141 (153)
Q Consensus 65 ~v~f~t-~i~Hpnv~~~~G~icl~~l~-~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~-~~~~f~~~~~~ 141 (153)
+|+|.| ++|||||+..+|.||+++|. ++|+|++++.+||.+ |++||.+|++++|+|.+||++|++ |+++|.++||+
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~s-i~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~ 161 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHA-VWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKY 161 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHH
Confidence 999999 99999997458999999998 899999999999999 999999999999999999999999 99999999999
Q ss_pred HHHHhh
Q 031754 142 IEHFLY 147 (153)
Q Consensus 142 ~~~~~~ 147 (153)
|+++..
T Consensus 162 ~~~~~~ 167 (172)
T 2y9m_A 162 FLAERE 167 (172)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999653
No 35
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-47 Score=280.02 Aligned_cols=139 Identities=29% Similarity=0.546 Sum_probs=133.6
Q ss_pred HHHHHHHHHHhC-CCCCcEEE-ecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCCC
Q 031754 4 PSKRREMDLMKL-MMSDYKVE-MINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMS 81 (153)
Q Consensus 4 ~~~Rl~~el~~l-~~~~~~v~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~ 81 (153)
+.+||++|++++ +++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +
T Consensus 27 ~~~RL~kEl~~l~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~-~ 104 (180)
T 2nvu_C 27 AQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL-E 104 (180)
T ss_dssp HHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-T
T ss_pred HHHHHHHHHHhcCCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC-C
Confidence 789999999998 56789998 7788999999998 999999999999999999999999999999999999999995 9
Q ss_pred CceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 031754 82 GSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHF 145 (153)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~ 145 (153)
|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||++++.
T Consensus 105 G~iCl~iL~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 105 GNVALNILREDWKPVLTINSIIYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CcEEcccccccCCCCCCHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999999999999999999 999999999999999999999999999999999999984
No 36
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.7e-47 Score=279.48 Aligned_cols=137 Identities=26% Similarity=0.616 Sum_probs=103.6
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecC-CCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMIN-DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 79 (153)
+.+||++|++++ +++|+++.+.+ +|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 18 ~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~ 97 (172)
T 2awf_A 18 GSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDK 97 (172)
T ss_dssp THHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCC
Confidence 789999999975 78899999876 69999999999999999999999999999999999999999999999999995
Q ss_pred CCCceEccccc-------------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHH-HHHHHHHHH
Q 031754 80 MSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRA-AYEQRVKGI 142 (153)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~-~f~~~~~~~ 142 (153)
+|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|++ +|+++||+|
T Consensus 98 -~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~s-I~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 98 -NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMIS-VISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp -TCBBCCGGGSCC---------CTTSCCTTCCHHHHHHH-HHHHHSCC-----------------------------
T ss_pred -CCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHH-HHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 8999999996 689999999999999 999999999999999999999999999 999999986
No 37
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-47 Score=278.51 Aligned_cols=143 Identities=56% Similarity=1.012 Sum_probs=131.5
Q ss_pred HHHHHHHHHHhCCCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCCCCc
Q 031754 4 PSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGS 83 (153)
Q Consensus 4 ~~~Rl~~el~~l~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~ 83 (153)
+.+||++|++++....+.| ..++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+..+|.
T Consensus 13 ~~~RL~~El~~l~~~~~~v-~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~ 91 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTRKV-YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGS 91 (171)
T ss_dssp CCHHHHHHHHHHHSSSSCE-EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred HHHHHHHHHHHHHhCCCCC-CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCe
Confidence 5799999999874333455 357899999999999999999999999999999999999999999999999999955999
Q ss_pred eEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 031754 84 VCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLY 147 (153)
Q Consensus 84 icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~ 147 (153)
||+++|.++|+|++++.+||.++|++||.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 92 iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a 155 (171)
T 1yf9_A 92 VCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHA 155 (171)
T ss_dssp BCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 9999999999999999999998338999999999999999999999999999999999999654
No 38
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=4.8e-46 Score=276.64 Aligned_cols=141 Identities=31% Similarity=0.550 Sum_probs=133.8
Q ss_pred CCHHHHHHHHHHhC-CCCCcEEE----ecCCCce---EEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcc
Q 031754 2 SSPSKRREMDLMKL-MMSDYKVE----MINDGIQ---EFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (153)
Q Consensus 2 ~~~~~Rl~~el~~l-~~~~~~v~----~~~~~~~---~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 73 (153)
+.+.+||++|++++ .++|+++. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 28 s~a~~RL~kEl~~l~~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 28 SAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp CHHHHHHHHHHHTCCCCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHhccCCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 44789999999988 56789998 7888999 9999996 88899999999999999999999999999999999
Q ss_pred ccceeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 031754 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHF 145 (153)
Q Consensus 74 Hpnv~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~ 145 (153)
||||+. +|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|++.
T Consensus 107 HPnV~~-~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~ 176 (190)
T 3o2u_A 107 HPNIDL-KGNVCLNILREDWSPALDLQSIITG-LLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSG 176 (190)
T ss_dssp CTTBCT-TSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBT
T ss_pred cCCCCC-CCeEechhccCCCCCCCCHHHHHHH-HHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHh
Confidence 999995 9999999999999999999999999 999999999999999999999999999999999999973
No 39
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.2e-46 Score=271.67 Aligned_cols=142 Identities=31% Similarity=0.594 Sum_probs=131.0
Q ss_pred HHHHHHHHHHhC---CCCCcEEEe-cCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEM-INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 79 (153)
+.+||++|++++ ++.|+++.+ .++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 568999999977 567887654 5679999999997 99999999999999999999999999999999999999995
Q ss_pred CCCceEccccc-CCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 80 MSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 80 ~~G~icl~~l~-~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
+|.||+++|. ++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 82 -~G~iCl~iL~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (154)
T 1c4z_D 82 -KGQVCLPVISAENWKPATKTDQVIQS-LIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149 (154)
T ss_dssp -TCBBCCTTTSSSSCCTTCCHHHHHHH-HHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC--
T ss_pred -CCEEECCCCCCCCCCCCCcHHHHHHH-HHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 9999999996 899999999999999 999999999999999999999999999999999999996544
No 40
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=2.3e-45 Score=268.23 Aligned_cols=140 Identities=26% Similarity=0.478 Sum_probs=130.6
Q ss_pred CCC-HHHHHHHHHHhC---C------------CCCcEEEecCCCceEEEEEEeCCCCCCCC--CcEEEEEEEeCCCCCCC
Q 031754 1 MSS-PSKRREMDLMKL---M------------MSDYKVEMINDGIQEFYVHFQGPNESPYH--GGVWRIRVELPDAYPYK 62 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~------------~~~~~v~~~~~~~~~w~~~i~gp~~t~y~--gg~f~~~i~fp~~yP~~ 62 (153)
||+ +.+||++|++++ + +.++.+.+.++|+++|+++|.||++|||+ ||.|++.|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 766 789999999965 3 56899999999999999999999999999 99999999999999999
Q ss_pred CCceEEecCccccceeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcC--CCCCCCccHHHHHHHHhCHHHHHHHHH
Q 031754 63 SPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLY--PNPSDPLNGEAAALLMRDRAAYEQRVK 140 (153)
Q Consensus 63 pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~--p~~~~p~n~~a~~~~~~~~~~f~~~~~ 140 (153)
||+|+|.|++|||||+ .+|.||+++|.++|+|++++.++|..+|++|+.+ |++++|+|.|||++|++|+++|.++||
T Consensus 85 pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVT-GEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp CCEEEESSCCCCSSCC-TTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred CCEEEEeCCcccccCC-CCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 9999999999999999 5999999999999999999999876658888875 899999999999999999999999998
Q ss_pred H
Q 031754 141 G 141 (153)
Q Consensus 141 ~ 141 (153)
+
T Consensus 164 r 164 (167)
T 4ds2_A 164 R 164 (167)
T ss_dssp T
T ss_pred h
Confidence 3
No 41
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.4e-44 Score=295.24 Aligned_cols=144 Identities=33% Similarity=0.643 Sum_probs=138.2
Q ss_pred CHHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeC
Q 031754 3 SPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (153)
Q Consensus 3 ~~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 79 (153)
.+.+||++|++++ +++|+++.+.++|++.|+++|.||++|||+||.|++.|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 3789999999966 7889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHhhh
Q 031754 80 MSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKGIEHFLYH 148 (153)
Q Consensus 80 ~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~~~~~ 148 (153)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 83 -~G~iCl~il~~~W~p~~~i~~vL~~-i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~ 149 (399)
T 4ddg_A 83 -NGSISLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 149 (399)
T ss_dssp -TCBBCCGGGTTSCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred -CCeEeCcccccCCCccccHHHHHHH-HHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999 999999999999999999999999999999999999997654
No 42
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-41 Score=236.89 Aligned_cols=116 Identities=19% Similarity=0.468 Sum_probs=101.3
Q ss_pred CCCHHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCc-cccc
Q 031754 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKI-YHPN 76 (153)
Q Consensus 1 M~~~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i-~Hpn 76 (153)
|+++.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 4 m~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp -----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 778899999999965 678999999999999999999999999999999999999999999999999999997 9999
Q ss_pred eeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCC
Q 031754 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSD 118 (153)
Q Consensus 77 v~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~ 118 (153)
|+. +|.||+++|.++|+|++++.+||.+ |++||.+|+...
T Consensus 84 v~~-~G~iCl~iL~~~W~P~~~i~~vl~s-i~~ll~~p~~~~ 123 (125)
T 2fo3_A 84 VYS-NGDICLSLLGDDYNPSLSISGLVLS-IISMLSSAKEKK 123 (125)
T ss_dssp BCT-TSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHC------
T ss_pred CCC-CCEEEchhcCCCCCCCCcHHHHHHH-HHHHHhCccccc
Confidence 995 9999999999999999999999999 999999998653
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.3e-41 Score=245.51 Aligned_cols=126 Identities=16% Similarity=0.293 Sum_probs=114.6
Q ss_pred CHHHHHHHHHHhC----CCCCcEEEecC-C--CceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcccc
Q 031754 3 SPSKRREMDLMKL----MMSDYKVEMIN-D--GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHP 75 (153)
Q Consensus 3 ~~~~Rl~~el~~l----~~~~~~v~~~~-~--~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hp 75 (153)
.+.+||++|++++ +++|+++.+.+ + |++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||
T Consensus 21 ~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 100 (156)
T 2q0v_A 21 PRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMS 100 (156)
T ss_dssp CHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccC
Confidence 3789999999975 56789998854 3 599999999999999999999999999999999999999999999999
Q ss_pred ceeCCCCce---EcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q 031754 76 NIDEMSGSV---CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRD 131 (153)
Q Consensus 76 nv~~~~G~i---cl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~ 131 (153)
||+. +|.| |+++|. +|+|++++.+||.+ |++||.+|++++|+|.+||.+|.+|
T Consensus 101 NV~~-~G~icisCL~iL~-~WsP~~ti~~vL~s-I~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 101 CVDN-CGRVIKNNLHILK-NWNRNYTIETILIS-LRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp TBCT-TSBBCGGGSHHHH-TCCTTCCHHHHHHH-HHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CCcc-CCeEehhhccccc-CCCCcCcHHHHHHH-HHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9995 8999 889987 59999999999999 9999999999999999999998765
No 44
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=7.7e-41 Score=264.58 Aligned_cols=141 Identities=21% Similarity=0.448 Sum_probs=130.0
Q ss_pred HHHHHHHHHHhC---CCC----CcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecC-----
Q 031754 4 PSKRREMDLMKL---MMS----DYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK----- 71 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~----~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~----- 71 (153)
+.+||++|++++ +++ ++.+.+.++|++.|+++|.||++|||+||.|+|.|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 789999999976 444 45678889999999999999999999999999999999999999999999998
Q ss_pred ccccceeCCCCceEccccc-------CCCCCCC-CHHHHHHHHHHHhhc--CCCCCCCccHHH--HHHHHhCHHHHHHHH
Q 031754 72 IYHPNIDEMSGSVCLDVIN-------QTWSPMF-DLVNVFEVFLPQLLL--YPNPSDPLNGEA--AALLMRDRAAYEQRV 139 (153)
Q Consensus 72 i~Hpnv~~~~G~icl~~l~-------~~W~p~~-~i~~il~~~i~~ll~--~p~~~~p~n~~a--~~~~~~~~~~f~~~~ 139 (153)
+|||||+ .+|.||+++|. ++|+|++ +|.+||.+ |++||. +|++++|+|.+| +.++.+|+++|+++|
T Consensus 157 ifHPNV~-~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLls-IqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~v 234 (323)
T 3ceg_A 157 RFNPNLY-NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVS-VQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNI 234 (323)
T ss_dssp CCBTTBC-TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHH-HHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHH
T ss_pred cccCCCC-cCCeEechhhccccCCCcCCCCcCcCCHHHHHHH-HHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHH
Confidence 9999999 59999999997 6999999 89999999 999996 777899999987 688999999999999
Q ss_pred HHHHHHh
Q 031754 140 KGIEHFL 146 (153)
Q Consensus 140 ~~~~~~~ 146 (153)
|+|++++
T Consensus 235 r~~t~k~ 241 (323)
T 3ceg_A 235 RQATVKW 241 (323)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999964
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=7.4e-42 Score=242.56 Aligned_cols=126 Identities=17% Similarity=0.305 Sum_probs=113.1
Q ss_pred CCC--HHHHHHHHHHhC----CCCCcEEEecC-C--CceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecC
Q 031754 1 MSS--PSKRREMDLMKL----MMSDYKVEMIN-D--GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK 71 (153)
Q Consensus 1 M~~--~~~Rl~~el~~l----~~~~~~v~~~~-~--~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~ 71 (153)
|++ +.+||++|++++ +++|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 765 789999999975 56789999854 3 49999999999999999999999999999999999999999999
Q ss_pred ccccceeCCCCce--EcccccCCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHH
Q 031754 72 IYHPNIDEMSGSV--CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALL 128 (153)
Q Consensus 72 i~Hpnv~~~~G~i--cl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~ 128 (153)
+|||||+..+|.| |++++. +|+|++++.+||.+ |++||.+|++++|+|.+|+.+|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~-i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLD-LRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHH-HHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHH-HHHHHcCCCCCCCCCcchhhcC
Confidence 9999999645999 999887 89999999999999 9999999999999999988654
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-40 Score=233.61 Aligned_cols=114 Identities=20% Similarity=0.478 Sum_probs=107.7
Q ss_pred CCCHHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCc-cccc
Q 031754 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKI-YHPN 76 (153)
Q Consensus 1 M~~~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i-~Hpn 76 (153)
|+.+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 456889999999965 778999999999999999999999999999999999999999999999999999996 9999
Q ss_pred eeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 031754 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116 (153)
Q Consensus 77 v~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~ 116 (153)
|+. +|.||+++|.++|+|++++.+||.+ |++||.+|+.
T Consensus 98 v~~-~G~ICl~iL~~~WsP~~ti~~vL~s-i~sll~~p~~ 135 (136)
T 2h2y_A 98 VYS-NGDICLSVLGDDYNPSLSISGLILS-IISMLSSAKE 135 (136)
T ss_dssp BCT-TCCBCCGGGTTTCCTTCCHHHHHHH-HHHHHSSSCC
T ss_pred CCC-CCEEECccccCCCCCCCcHHHHHHH-HHHHHhCcCc
Confidence 995 9999999999999999999999999 9999999874
No 47
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.4e-40 Score=239.56 Aligned_cols=121 Identities=19% Similarity=0.320 Sum_probs=110.9
Q ss_pred HHHHHHHHHHhC---CCCC-cEEEec-CCC--ceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccc
Q 031754 4 PSKRREMDLMKL---MMSD-YKVEMI-NDG--IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~-~~v~~~-~~~--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpn 76 (153)
+.+||++|++++ ++.| +.+.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 688999999976 4566 778874 454 899999999999999999999999999999999999999999999999
Q ss_pred eeCCCCceEccccc--CCCCCCCCHHHHHHHHHHHhhc-CCCCCCCccHHHH
Q 031754 77 IDEMSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLLL-YPNPSDPLNGEAA 125 (153)
Q Consensus 77 v~~~~G~icl~~l~--~~W~p~~~i~~il~~~i~~ll~-~p~~~~p~n~~a~ 125 (153)
|+..+|.||+++|. ++|+|++++++||.+ |++||. +||+++|+|.|||
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~s-I~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQE-LRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHH-HHHHHTSTTTTTCCCCCTTC
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHH-HHHHHccCCCCCCCCChhhc
Confidence 99558999999998 899999999999999 999995 7999999999987
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-39 Score=229.40 Aligned_cols=110 Identities=24% Similarity=0.564 Sum_probs=102.7
Q ss_pred CCCHHHHHHHHHHhC---CCCCcEEE--ecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcc--
Q 031754 1 MSSPSKRREMDLMKL---MMSDYKVE--MINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY-- 73 (153)
Q Consensus 1 M~~~~~Rl~~el~~l---~~~~~~v~--~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~-- 73 (153)
|+++.+||++|++++ +++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~ 99 (136)
T 2a7l_A 20 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPV 99 (136)
T ss_dssp GTTSCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCC
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCC
Confidence 676669999999965 77899865 77889999999999999999999999999999999999999999999999
Q ss_pred ccceeCCCCceEcccccCCCCCCCCHHHHHHHHHHHhhc
Q 031754 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLL 112 (153)
Q Consensus 74 Hpnv~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~ 112 (153)
||||+. +|.||+++|.++|+|++++.+||.+ |++||.
T Consensus 100 HPNV~~-~G~ICL~iL~~~WsP~~ti~~vL~s-I~slL~ 136 (136)
T 2a7l_A 100 HPHVYS-NGHICLSILTEDWSPALSVQSVCLS-IISMLS 136 (136)
T ss_dssp BTTBCT-TCBBCCGGGTTTCCTTSCHHHHHHH-HHHHTC
T ss_pred CccCCC-CCeEEchhcCCCCCCCCcHHHHHHH-HHHHhC
Confidence 999995 9999999999999999999999999 999874
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=239.02 Aligned_cols=121 Identities=19% Similarity=0.317 Sum_probs=110.7
Q ss_pred HHHHHHHHHHhC---CCCC-cEEEe-cCCC--ceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccc
Q 031754 4 PSKRREMDLMKL---MMSD-YKVEM-INDG--IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~-~~v~~-~~~~--~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpn 76 (153)
+.+||++|++++ ++.| +.+.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 789999999976 4556 67777 4454 899999999999999999999999999999999999999999999999
Q ss_pred eeCCCCceEccccc--CCCCCCCCHHHHHHHHHHHhhc-CCCCCCCccHHHH
Q 031754 77 IDEMSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLLL-YPNPSDPLNGEAA 125 (153)
Q Consensus 77 v~~~~G~icl~~l~--~~W~p~~~i~~il~~~i~~ll~-~p~~~~p~n~~a~ 125 (153)
|+..+|.||+++|. ++|+|++++.+||.+ |++||. +||.++|+|.|||
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~s-I~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQE-LRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHH-HHHHHHSTTTSSSCCCSSCC
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHH-HHHHHccCCCCCCCCCcccc
Confidence 99559999999998 899999999999999 999997 5999999999986
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-36 Score=224.90 Aligned_cols=132 Identities=20% Similarity=0.436 Sum_probs=109.5
Q ss_pred HHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCC
Q 031754 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (153)
Q Consensus 4 ~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 80 (153)
+.+||++|++++ +++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |||++.
T Consensus 15 a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~- 91 (187)
T 2f4w_A 15 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC- 91 (187)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc-
Confidence 689999999965 77899999999999999999999999999999999999999999999999999999 999995
Q ss_pred CCceEcccc---cCCCCCCCCHHHHHHHHHHHhhcCCCCCCC---ccHHHHHHHHhCHHHHHHHH
Q 031754 81 SGSVCLDVI---NQTWSPMFDLVNVFEVFLPQLLLYPNPSDP---LNGEAAALLMRDRAAYEQRV 139 (153)
Q Consensus 81 ~G~icl~~l---~~~W~p~~~i~~il~~~i~~ll~~p~~~~p---~n~~a~~~~~~~~~~f~~~~ 139 (153)
+|.||+++| .++|+|++++.+||.+ |++||.+|+++.. ...+..++++.+...|+.+.
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~s-i~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~~~ 155 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTG-LLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKD 155 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHH-HHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHHTC
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHH-HHHHhcCCCCCCcccccChHHHHHHHHHHHHHhhcC
Confidence 999999999 6899999999999999 9999999988654 23445566666665555443
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=3e-38 Score=233.88 Aligned_cols=136 Identities=20% Similarity=0.345 Sum_probs=120.2
Q ss_pred CCC-HHHHHHHHHHhC---C---CCCcEEEecCCCceEEEEEEeCC-CCCCCCC-----------cEEEEEEEeCCCCCC
Q 031754 1 MSS-PSKRREMDLMKL---M---MSDYKVEMINDGIQEFYVHFQGP-NESPYHG-----------GVWRIRVELPDAYPY 61 (153)
Q Consensus 1 M~~-~~~Rl~~el~~l---~---~~~~~v~~~~~~~~~w~~~i~gp-~~t~y~g-----------g~f~~~i~fp~~yP~ 61 (153)
|++ +.+||++|++++ + +.|+++.+.++|++.|+++|.|| ++|||+| |.|+++|.||++||+
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~ 103 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPF 103 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCC
Confidence 444 789999999976 3 57899999999999999999998 9999998 899999999999999
Q ss_pred CCCceEEecCcccc-ceeCCCCceEccccc-CCCCCCCCHHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHH
Q 031754 62 KSPSIGFVNKIYHP-NIDEMSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRV 139 (153)
Q Consensus 62 ~pP~v~f~t~i~Hp-nv~~~~G~icl~~l~-~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~ 139 (153)
+||+|+|.|++||| ||+ .+|.||+++|. ++|+|+++|.+||.+ |++||.+|+... .+..++.+|.+++
T Consensus 104 ~PP~V~f~tpi~hPnnV~-~~G~ICL~iL~~~~WsP~~ti~~VL~s-I~slL~~p~a~~--------~~~~~~~~Y~~~~ 173 (186)
T 1zuo_A 104 DPPFVRVVLPVLSGGYVL-GGGALCMELLTKQGWSSAYSIESVIMQ-INATLVKGKARV--------QFGANKNQYNLAR 173 (186)
T ss_dssp SCCEEEEEESCEESTTBC-GGGBBCCGGGSTTTCCTTSCHHHHHHH-HHHHHHHTTCEE--------CTTCCTTCCCHHH
T ss_pred CCCeEEEeCCccCCCccC-CCCcEEeccCCCCCCCCcCcHHHHHHH-HHHHHcCCChhH--------hhccCHHHHhHHH
Confidence 99999999999999 699 49999999997 799999999999999 999999986533 4555678888888
Q ss_pred HHHHHHh
Q 031754 140 KGIEHFL 146 (153)
Q Consensus 140 ~~~~~~~ 146 (153)
++++.+.
T Consensus 174 ~~~~~~~ 180 (186)
T 1zuo_A 174 AQQSYNS 180 (186)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.94 E-value=4.1e-29 Score=179.14 Aligned_cols=101 Identities=18% Similarity=0.313 Sum_probs=89.8
Q ss_pred HHHHHHHHHhCCCCCcEEEecCCCceEEEEEEeCCCCCCCCCc----------EEEEEEEeCCCCCCCCCceEEecC-cc
Q 031754 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGG----------VWRIRVELPDAYPYKSPSIGFVNK-IY 73 (153)
Q Consensus 5 ~~Rl~~el~~l~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~yP~~pP~v~f~t~-i~ 73 (153)
.+||++|++.+.. ++.+.++|+..|.+.+.||.||+|+|| .|.++|.||++||++||+|+|.+. +|
T Consensus 34 ~~RL~eE~k~L~k---~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~ 110 (172)
T 2z6o_A 34 VQRLKEEYQSLIR---YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGK 110 (172)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred HHHHHHHHHHHHH---HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCC
Confidence 7999999997754 567777899999999999999999999 999999999999999999999997 99
Q ss_pred ccceeCCCCceEcccc-cC---CCCCCCCHHHHHHHHHHH
Q 031754 74 HPNIDEMSGSVCLDVI-NQ---TWSPMFDLVNVFEVFLPQ 109 (153)
Q Consensus 74 Hpnv~~~~G~icl~~l-~~---~W~p~~~i~~il~~~i~~ 109 (153)
|||||. +|+||||+| +. .|+|+++|.++|..++-.
T Consensus 111 hpnmY~-~G~ICLdIL~kp~Ws~~~P~~~IahiL~lgl~p 149 (172)
T 2z6o_A 111 TAKMYR-GGKICLTDHFKPLWARNVPKFGLAHLMALGLGP 149 (172)
T ss_dssp CSSBCT-TSBBCCCTTHHHHHHHHTTSCCHHHHHHHTHHH
T ss_pred CCCCCC-CCcEechhhccccccccCCccCHHHHHhhccCc
Confidence 999995 999999999 43 566999999999654433
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.81 E-value=5.7e-20 Score=132.54 Aligned_cols=110 Identities=23% Similarity=0.369 Sum_probs=88.4
Q ss_pred HHHHHHHHhC----C--CCCcEEEecCCCceEEEEEEeCCCCCCCCCcE---EEEEEEeCCCCCCCCCceEEec------
Q 031754 6 KRREMDLMKL----M--MSDYKVEMINDGIQEFYVHFQGPNESPYHGGV---WRIRVELPDAYPYKSPSIGFVN------ 70 (153)
Q Consensus 6 ~Rl~~el~~l----~--~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~---f~~~i~fp~~yP~~pP~v~f~t------ 70 (153)
+|..+|+.++ + .+...+...++....+-+.+.|.-.++|+|+. |.+.|.||.+||++||.|.|.+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 4555666643 1 12233445556677777777787779999998 8899999999999999998865
Q ss_pred -C---cc-ccceeCCCCceEcccccCCCCC-CCCHHHHHHHHHHHhhcCCCCCC
Q 031754 71 -K---IY-HPNIDEMSGSVCLDVINQTWSP-MFDLVNVFEVFLPQLLLYPNPSD 118 (153)
Q Consensus 71 -~---i~-Hpnv~~~~G~icl~~l~~~W~p-~~~i~~il~~~i~~ll~~p~~~~ 118 (153)
+ |+ ||||| .+|+||+++|. +|+| +.++.++|.. |+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD-~~G~I~lpyL~-~W~p~~s~L~~ll~~-l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYID-SNGWIALPILH-AWDPAAMNLIMVVQE-LMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBC-TTSBBCCGGGG-SCCGGGCCHHHHHHH-HHHTTSCCCCCC
T ss_pred ccccccCCCCCCC-CCCcEeCcccc-cCCCCcCcHHHHHHH-HHHHhcCCCCCC
Confidence 1 77 99999 49999999995 6999 6899999999 999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.77 E-value=4.6e-20 Score=129.57 Aligned_cols=103 Identities=17% Similarity=0.316 Sum_probs=85.9
Q ss_pred HHHHHHHHHhCCCCCcEEEecCCCceEEEEEEeCCCCCCCCCc----------EEEEEEEeCCCCCCCCCceEEecC-cc
Q 031754 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGG----------VWRIRVELPDAYPYKSPSIGFVNK-IY 73 (153)
Q Consensus 5 ~~Rl~~el~~l~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~yP~~pP~v~f~t~-i~ 73 (153)
.+||.+|+..|. -+|+..+++...|...+.||.||+|.|+ .|.++|.||.+||.+||+|+|.+. ++
T Consensus 36 ~~RlkeEy~alI---~yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgk 112 (168)
T 3kpa_A 36 TARLKEEYASLI---TYVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGK 112 (168)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred HHHHHHHHHHHH---HHHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCc
Confidence 579999999774 2566667778899999999999999999 999999999999999999999994 89
Q ss_pred ccceeCCCCceEccccc-C---CCCCCCCHHHHHHHHHHHhh
Q 031754 74 HPNIDEMSGSVCLDVIN-Q---TWSPMFDLVNVFEVFLPQLL 111 (153)
Q Consensus 74 Hpnv~~~~G~icl~~l~-~---~W~p~~~i~~il~~~i~~ll 111 (153)
|||+++ +|+|||+++. . .-.|.++|...|..++--.|
T Consensus 113 t~kmYr-~GkICLdIhwkPlW~~n~P~fGiahalalgl~pwl 153 (168)
T 3kpa_A 113 TVKMYR-GGKICMTTHFFPLWARNVPYFGISHVLALGLGPWL 153 (168)
T ss_dssp CSSEET-TTEECCCTTHHHHHHHTTTTCCHHHHHHHTHHHHH
T ss_pred CccccC-CCcEEeccccchhhHhcCCchhHHHHHHhccchHH
Confidence 999994 9999999973 2 23567888888765454444
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.50 E-value=4.8e-14 Score=99.96 Aligned_cols=78 Identities=24% Similarity=0.508 Sum_probs=67.9
Q ss_pred CCceEEEEEEeCCCCCCCCCcEEE--EEEEeCCCCCCCCCceEEecC------ccccceeCCCCceEcccccCCCCC-CC
Q 031754 27 DGIQEFYVHFQGPNESPYHGGVWR--IRVELPDAYPYKSPSIGFVNK------IYHPNIDEMSGSVCLDVINQTWSP-MF 97 (153)
Q Consensus 27 ~~~~~w~~~i~gp~~t~y~gg~f~--~~i~fp~~yP~~pP~v~f~t~------i~Hpnv~~~~G~icl~~l~~~W~p-~~ 97 (153)
.++..|.++|. .+|+|+.|. +.|.||.+||++||.| |.++ ..|+|||. +|+||+++|.+ |++ ..
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~-~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDA-NGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCT-TCBBCCHHHHT-CCTTTC
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCC-CCCEecccccc-cCCCCC
Confidence 47889999996 679999998 5999999999999999 6655 48999994 99999999975 987 78
Q ss_pred CHHHHHHHHHHHhhc
Q 031754 98 DLVNVFEVFLPQLLL 112 (153)
Q Consensus 98 ~i~~il~~~i~~ll~ 112 (153)
++.+++.. ++..|.
T Consensus 124 nL~~ll~~-l~~~F~ 137 (146)
T 3obq_A 124 DLLGLIQV-MIVVFG 137 (146)
T ss_dssp CHHHHHHH-HHHHHH
T ss_pred CHHHHHHH-HHHHHh
Confidence 99999988 877775
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.59 E-value=0.0071 Score=40.95 Aligned_cols=68 Identities=12% Similarity=0.235 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHHhC---CCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEec
Q 031754 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVN 70 (153)
Q Consensus 1 M~~~~~Rl~~el~~l---~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t 70 (153)
|+....+...|+.-| -+..+.+ ..+....+.+.+..-.+..-+.-.+.+.|.||++||..||.|.+.+
T Consensus 8 m~~~~e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 8 MTDYGEEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCCHHHHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 434445566677644 2233333 2333456666665322222234478999999999999999998754
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.45 E-value=0.12 Score=35.22 Aligned_cols=41 Identities=20% Similarity=0.380 Sum_probs=29.4
Q ss_pred ceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEec
Q 031754 29 IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVN 70 (153)
Q Consensus 29 ~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t 70 (153)
...+.+.+.+..+ .-..-.+.+.|.+|++||..||.|.+.+
T Consensus 45 ~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 4567777763222 1123478899999999999999998765
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.30 E-value=0.15 Score=34.15 Aligned_cols=65 Identities=17% Similarity=0.258 Sum_probs=37.4
Q ss_pred HHHHHHHHhC---CCCCcEEEecC--CCceEEEEEEeCCCCCCCC--CcEEEEEEEeCCCCCCCCCceEEec
Q 031754 6 KRREMDLMKL---MMSDYKVEMIN--DGIQEFYVHFQGPNESPYH--GGVWRIRVELPDAYPYKSPSIGFVN 70 (153)
Q Consensus 6 ~Rl~~el~~l---~~~~~~v~~~~--~~~~~w~~~i~gp~~t~y~--gg~f~~~i~fp~~yP~~pP~v~f~t 70 (153)
.+...|+.-| -...+.+.-.. .+...+.+.+..+.+..-+ .-.+.+.|.+|++||..+|.|...+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 3455666544 23334433221 1344555556422221111 2478899999999999999998776
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.82 E-value=0.14 Score=34.35 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=29.0
Q ss_pred ceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEec
Q 031754 29 IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVN 70 (153)
Q Consensus 29 ~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t 70 (153)
...+.+.+... +..-..-.+.+.|.+|++||..||.|...+
T Consensus 39 ~~~f~i~l~~~-~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 39 GTVFRIHTKAE-GFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp CEEEEEEEECC-TTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred CCeEEEEecCC-CCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 46777777632 211112478999999999999999997653
No 60
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=93.69 E-value=0.6 Score=33.81 Aligned_cols=82 Identities=16% Similarity=0.240 Sum_probs=56.9
Q ss_pred HHHHHHHhCCCCCcEEEecCCCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCccccceeCCCCceEc
Q 031754 7 RREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSVCL 86 (153)
Q Consensus 7 Rl~~el~~l~~~~~~v~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl 86 (153)
+|.+|+..+- +=.+.-.+.++....+.+.... |....++|.++.+||.++|.+..--|+ |.
T Consensus 5 ~li~Ei~~iG--W~~l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~---------- 65 (186)
T 3zqs_A 5 SLIEEIGTLG--WDKLVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF---------- 65 (186)
T ss_dssp SHHHHHHHHC--GGGEEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC----------
T ss_pred HHHHHHHHhC--CceeeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc----------
Confidence 5677777662 1123333567888888887433 788999999999999999987644332 11
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHhh
Q 031754 87 DVINQTWSPMFDLVNVFEVFLPQLL 111 (153)
Q Consensus 87 ~~l~~~W~p~~~i~~il~~~i~~ll 111 (153)
.-.|++..++.+++.. ++..+
T Consensus 66 ---~~~w~~~ssL~~v~~q-F~~~L 86 (186)
T 3zqs_A 66 ---CASWTPQSSLISIYSQ-FLAAI 86 (186)
T ss_dssp ---CCCCCTTCCHHHHHHH-HHHHH
T ss_pred ---ccccCCCccHHHHHHH-HHHHH
Confidence 1269998999999877 55444
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=92.04 E-value=0.093 Score=35.66 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=27.0
Q ss_pred ceEEEEEEeCCCC-C-CCCCcEEEEEEEeCCCCCCCCCceEEe
Q 031754 29 IQEFYVHFQGPNE-S-PYHGGVWRIRVELPDAYPYKSPSIGFV 69 (153)
Q Consensus 29 ~~~w~~~i~gp~~-t-~y~gg~f~~~i~fp~~yP~~pP~v~f~ 69 (153)
.....+.+. +.+ + .-..-.+.+.|.||++||..+|.|.+.
T Consensus 44 ~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 44 PPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred CcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 345666664 222 1 001246899999999999999999874
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.53 E-value=0.33 Score=33.82 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=21.2
Q ss_pred EEEEEEEeCCCCCCCCCceEEec
Q 031754 48 VWRIRVELPDAYPYKSPSIGFVN 70 (153)
Q Consensus 48 ~f~~~i~fp~~yP~~pP~v~f~t 70 (153)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999998665
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.20 E-value=0.18 Score=35.07 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=21.6
Q ss_pred cEEEEEEEeCCCCCCCCCceEEecC
Q 031754 47 GVWRIRVELPDAYPYKSPSIGFVNK 71 (153)
Q Consensus 47 g~f~~~i~fp~~yP~~pP~v~f~t~ 71 (153)
-.+.+.|.+|++||..||.|.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987753
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=75.70 E-value=0.56 Score=30.99 Aligned_cols=31 Identities=6% Similarity=0.040 Sum_probs=0.0
Q ss_pred CCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 031754 114 PNPSDPLNGEAAALLMRDRAAYEQRVKGIEH 144 (153)
Q Consensus 114 p~~~~p~n~~a~~~~~~~~~~f~~~~~~~~~ 144 (153)
.....|.+.++|++|.+|++.|...||.|+.
T Consensus 21 ~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~ 51 (108)
T 2cwb_A 21 ETTTEAVDAATAEKVFKQYANDNGVDGEWTY 51 (108)
T ss_dssp -------------------------------
T ss_pred cccCCchhHHHHHHHHhchhccccccccccc
Confidence 3456789999999999999999999999994
No 65
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=41.17 E-value=76 Score=22.47 Aligned_cols=45 Identities=16% Similarity=0.318 Sum_probs=32.9
Q ss_pred CCceEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCceEEecCcc
Q 031754 27 DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (153)
Q Consensus 27 ~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 73 (153)
+....|.+.+.|+.+.-...-+=++.+.+.+.||. |.-.+..+.|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 45789999999987665544566899999999975 6665655544
No 66
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=32.17 E-value=1.2e+02 Score=20.62 Aligned_cols=44 Identities=7% Similarity=0.171 Sum_probs=32.5
Q ss_pred ceEEE--EEEeCCCCCCCC-CcEEEEEEEeCCCCCCCCCceEEecCccc
Q 031754 29 IQEFY--VHFQGPNESPYH-GGVWRIRVELPDAYPYKSPSIGFVNKIYH 74 (153)
Q Consensus 29 ~~~w~--~~i~gp~~t~y~-gg~f~~~i~fp~~yP~~pP~v~f~t~i~H 74 (153)
+..|. +.+.|+.+.... .-+=++.+.+-+.|+. |...+..+.|.
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~pPF~ 78 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDPPFR 78 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECSTTCC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCCCcE
Confidence 57998 788999888664 3455788889999874 77777766543
No 67
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=25.31 E-value=73 Score=18.40 Aligned_cols=20 Identities=10% Similarity=0.104 Sum_probs=17.7
Q ss_pred ccHHHHHHHHhCHHHHHHHH
Q 031754 120 LNGEAAALLMRDRAAYEQRV 139 (153)
Q Consensus 120 ~n~~a~~~~~~~~~~f~~~~ 139 (153)
.|++.+++...|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 58999999999999998765
No 68
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=24.84 E-value=23 Score=16.41 Aligned_cols=15 Identities=33% Similarity=0.605 Sum_probs=8.4
Q ss_pred CCCCceEEecCcccc
Q 031754 61 YKSPSIGFVNKIYHP 75 (153)
Q Consensus 61 ~~pP~v~f~t~i~Hp 75 (153)
...|.-.|..+.|||
T Consensus 5 mtlpenyfserpyhp 19 (26)
T 2jrw_A 5 MTLPENYFSERPYHP 19 (26)
T ss_dssp CCCSSSSCCSSSCCS
T ss_pred cccchhhcccCCCCC
Confidence 334444566666666
No 69
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=23.54 E-value=74 Score=19.07 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=18.7
Q ss_pred ccHHHHHHHHhCHHHHHHHHH
Q 031754 120 LNGEAAALLMRDRAAYEQRVK 140 (153)
Q Consensus 120 ~n~~a~~~~~~~~~~f~~~~~ 140 (153)
.|++.+++...|.++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 589999999999999998764
No 70
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=22.94 E-value=80 Score=22.86 Aligned_cols=25 Identities=28% Similarity=0.624 Sum_probs=21.1
Q ss_pred CCcEEEEEEEeCCCCCC-----CCCceEEe
Q 031754 45 HGGVWRIRVELPDAYPY-----KSPSIGFV 69 (153)
Q Consensus 45 ~gg~f~~~i~fp~~yP~-----~pP~v~f~ 69 (153)
+.|.|.|+-.+|--||. .||.|-|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 36899999999999998 78887765
No 71
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=22.60 E-value=2e+02 Score=20.00 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=27.3
Q ss_pred CceEEEEEEeCCCCC-------------CCCCcEEEEEEEeCCCCCCCCCc
Q 031754 28 GIQEFYVHFQGPNES-------------PYHGGVWRIRVELPDAYPYKSPS 65 (153)
Q Consensus 28 ~~~~w~~~i~gp~~t-------------~y~gg~f~~~i~fp~~yP~~pP~ 65 (153)
+..+|.++..|..++ |-.-|.++|.+.-++=-|.+-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 566999998886544 44469999999986555665555
No 72
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=21.49 E-value=1.3e+02 Score=18.93 Aligned_cols=25 Identities=8% Similarity=0.081 Sum_probs=19.9
Q ss_pred CcEEEEEEEeCCCCCCCCCceEEecC
Q 031754 46 GGVWRIRVELPDAYPYKSPSIGFVNK 71 (153)
Q Consensus 46 gg~f~~~i~fp~~yP~~pP~v~f~t~ 71 (153)
+..+...+.|+..|+. +|+|.+.-.
T Consensus 28 ~R~~~~~V~F~~~F~~-~P~V~v~l~ 52 (101)
T 2ccv_A 28 TRELAKNITFASPYCR-PPVVLLSIT 52 (101)
T ss_dssp CEEEEEEEECSSCCSS-CCEEEEEEE
T ss_pred ceEEEEEeEeCcccCC-CCEEEEEeE
Confidence 3467889999999985 999987643
Done!