BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031755
(153 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224071049|ref|XP_002303346.1| predicted protein [Populus trichocarpa]
gi|222840778|gb|EEE78325.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/150 (66%), Positives = 118/150 (78%), Gaps = 3/150 (2%)
Query: 7 ATVSYPQPMFANSLTNRENPCFRTFNLRASLSN--YPLASRIMVRNLPFTTHEHTLQKEF 64
+TVS P P AN+++ R +T LRAS+SN +PLASRIMV N+ + E TLQKEF
Sbjct: 15 STVSIPIPSLANAISQRNFKNPKTLKLRASISNPNFPLASRIMVTNIGHSISEATLQKEF 74
Query: 65 SAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGK 124
S FGE+AEVKLVKDE K+SK YAFIQYTSQDDA+LALE+MD K LDGRLI+VD+AKPGK
Sbjct: 75 SNFGEIAEVKLVKDETIKRSKPYAFIQYTSQDDAILALENMDRKTLDGRLIFVDLAKPGK 134
Query: 125 DRFGGYPRTSGPPKQQPLSE-QDEVADCWY 153
DRF GY +T GPPK+Q + + QDEVADCWY
Sbjct: 135 DRFRGYMKTCGPPKKQQVQDTQDEVADCWY 164
>gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana]
Length = 152
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 120/157 (76%), Gaps = 9/157 (5%)
Query: 1 MWAAAAATVSYPQPMFANSLTNRENPCFRTF-NLRASLSNYPLASRIMVRNLPFTTHEHT 59
MW+A T+S+P F S ++ N R F ++ASL NYPLAS+IMVRNLPF+T E
Sbjct: 1 MWSA---TLSFPS--FVASSSSLPNYRNRRFPKIKASLFNYPLASKIMVRNLPFSTSEDF 55
Query: 60 LQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDI 119
L++EFSAFGE+AEVKL+KDE ++SKGYAFIQ+TSQDDA LA+E+MD + +GR+IY+DI
Sbjct: 56 LKREFSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDI 115
Query: 120 AKPGKDRFGGYPRTSGPPKQQPLSEQ---DEVADCWY 153
AKPGK F G PRTSGPP++ + E+ DEVADCWY
Sbjct: 116 AKPGKRDFQGLPRTSGPPEKSDVPEEAANDEVADCWY 152
>gi|18415425|ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|51971865|dbj|BAD44597.1| putative protein [Arabidopsis thaliana]
gi|107738041|gb|ABF83619.1| At4g20030 [Arabidopsis thaliana]
gi|332658864|gb|AEE84264.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 152
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 120/157 (76%), Gaps = 9/157 (5%)
Query: 1 MWAAAAATVSYPQPMFANS-LTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHT 59
MW+A T+S+P + ++S L N N R ++ASL NYPLAS+IMVRNLPF+T E
Sbjct: 1 MWSA---TLSFPSFVASSSSLPNYRN--LRFPKIKASLFNYPLASKIMVRNLPFSTSEDF 55
Query: 60 LQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDI 119
L++EFSAFGE+AEVKL+KDE K+SKGYAFIQ+TSQDDA LA+E+MD + +GR+IY+DI
Sbjct: 56 LKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDI 115
Query: 120 AKPGKDRFGGYPRTSGPPKQQPLSEQ---DEVADCWY 153
AKPGK F G PRTSGPP++ E+ DEVADCWY
Sbjct: 116 AKPGKRDFQGLPRTSGPPEKSDEPEEAANDEVADCWY 152
>gi|449433509|ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
gi|449490646|ref|XP_004158665.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
Length = 158
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/163 (58%), Positives = 116/163 (71%), Gaps = 15/163 (9%)
Query: 1 MWAAAAATVSYPQ------PMFANSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFT 54
MWA TVS+P P+F N+ N + NLRAS +YPLASR+MVRNLP++
Sbjct: 1 MWAT---TVSFPSVSNLRGPIFPNNRLVASNRI--SLNLRASFFDYPLASRLMVRNLPYS 55
Query: 55 THEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRL 114
T+E LQ+EFS FGE+AEV L KD TK+ KGYAFIQYT QDDA+LALE+MD K DGR+
Sbjct: 56 TNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDAMLALETMDCKIFDGRM 115
Query: 115 IYVDIAKPGKDRFGGYPRTSGPPKQQPLS----EQDEVADCWY 153
IYV+IA PG FGGYPR SGPPK++P +Q++VADCWY
Sbjct: 116 IYVEIATPGSGSFGGYPRASGPPKERPNERANVDQEDVADCWY 158
>gi|297804134|ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
gi|297315787|gb|EFH46210.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 120/157 (76%), Gaps = 9/157 (5%)
Query: 1 MWAAAAATVSYPQPMFANS-LTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHT 59
MW+A T+S+P + ++S L N N F +ASL NYPLAS+IMVRNLPF+T E
Sbjct: 1 MWSA---TLSFPSFVASSSALPNYRNRRFP--KSKASLFNYPLASKIMVRNLPFSTSEDF 55
Query: 60 LQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDI 119
L++EFSAFGE+AEVKL++DE K+SKGYAFIQ+TSQDDA LA+E+MD + +GR+IY+DI
Sbjct: 56 LKREFSAFGEIAEVKLIRDESMKRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDI 115
Query: 120 AKPGKDRFGGYPRTSGPPKQQPLSEQ---DEVADCWY 153
AKPGK F G PRTSGPP++ + E+ DEVADCWY
Sbjct: 116 AKPGKRDFQGLPRTSGPPEKTDVPEEAGNDEVADCWY 152
>gi|255585455|ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis]
gi|223526734|gb|EEF28964.1| RNA binding protein, putative [Ricinus communis]
Length = 152
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 106/138 (76%), Gaps = 4/138 (2%)
Query: 19 SLTNRENPCFRTFNLRASLS---NYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKL 75
S+ +R N T NLRAS S N+PLASRI+V+NL ++ E +LQKEFS FGE+AEVKL
Sbjct: 16 SIPSRPNGKSSTLNLRASFSSTSNFPLASRIIVKNLGYSVGESSLQKEFSNFGEIAEVKL 75
Query: 76 VKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
VKD+ K+SK + FIQYT QDDA+LA+E+MD K DGRLIYVD+AKPGK+ F GYP+ SG
Sbjct: 76 VKDDERKRSKAFVFIQYTCQDDAILAMENMDRKIFDGRLIYVDLAKPGKETFRGYPKASG 135
Query: 136 PPKQQPLSEQDEVADCWY 153
PP L EQDEVADCWY
Sbjct: 136 PPPLH-LREQDEVADCWY 152
>gi|449433511|ref|XP_004134541.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 2 [Cucumis sativus]
gi|449490650|ref|XP_004158666.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 2 [Cucumis sativus]
Length = 153
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 111/163 (68%), Gaps = 20/163 (12%)
Query: 1 MWAAAAATVSYPQ------PMFANSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFT 54
MWA TVS+P P+F N+ N + NLRAS +YPLASR+MVRNLP++
Sbjct: 1 MWAT---TVSFPSVSNLRGPIFPNNRLVASNRI--SLNLRASFFDYPLASRLMVRNLPYS 55
Query: 55 THEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRL 114
T+E LQ+EFS F V L KD TK+ KGYAFIQYT QDDA+LALE+MD K DGR+
Sbjct: 56 TNESRLQEEFSNF-----VLLAKDRSTKRPKGYAFIQYTCQDDAMLALETMDCKIFDGRM 110
Query: 115 IYVDIAKPGKDRFGGYPRTSGPPKQQPLS----EQDEVADCWY 153
IYV+IA PG FGGYPR SGPPK++P +Q++VADCWY
Sbjct: 111 IYVEIATPGSGSFGGYPRASGPPKERPNERANVDQEDVADCWY 153
>gi|351721799|ref|NP_001235686.1| uncharacterized protein LOC100305971 [Glycine max]
gi|255627149|gb|ACU13919.1| unknown [Glycine max]
Length = 150
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 97/131 (74%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
R NP T + +YPLAS+I+V+NLP++T E TLQKEFS FG++AEVK+VKD TK
Sbjct: 20 RVNPSLLTLRASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDMNTK 79
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPL 142
+SKG AFIQYT QDDA+LALE+MD K+ GR I V+IA+ G D FG PR SGPPK+ L
Sbjct: 80 RSKGIAFIQYTCQDDAMLALETMDQKDFYGRTIGVEIARLGWDDFGASPRASGPPKKWDL 139
Query: 143 SEQDEVADCWY 153
EQ EV DCWY
Sbjct: 140 PEQGEVVDCWY 150
>gi|356512219|ref|XP_003524818.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 149
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 100/145 (68%), Gaps = 6/145 (4%)
Query: 15 MFANSLTNRE------NPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFG 68
M A+S T NP F + +YPLAS+I+V+NLP++T E TLQKEFS FG
Sbjct: 5 MLASSFTGYAKPFASVNPSLLPFRASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSNFG 64
Query: 69 EVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFG 128
++AE KLVKD TK+SKG AFIQYT QDDA+LALE+MD K+ GR I V+IA+ G D FG
Sbjct: 65 KIAEGKLVKDMNTKRSKGIAFIQYTCQDDAMLALETMDQKDFYGRTIGVEIARLGWDDFG 124
Query: 129 GYPRTSGPPKQQPLSEQDEVADCWY 153
PR SGPPK+ L EQ EV DCWY
Sbjct: 125 ASPRASGPPKKWHLPEQGEVVDCWY 149
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 92/112 (82%)
Query: 29 RTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYA 88
+ FNLRASL ++PLASRIMV NL + T + +LQ+EFS FG++ EV +VKD+ K+ +GYA
Sbjct: 23 KAFNLRASLFDHPLASRIMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYA 82
Query: 89 FIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQ 140
FIQYTSQD A+LALE+MDHK LDGR++ V++AKPGK+ FG YPRT GPP ++
Sbjct: 83 FIQYTSQDHAMLALENMDHKYLDGRVVCVELAKPGKNDFGRYPRTCGPPSKK 134
>gi|2827657|emb|CAA16611.1| putative protein [Arabidopsis thaliana]
gi|7268798|emb|CAB79003.1| putative protein [Arabidopsis thaliana]
Length = 115
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 87/107 (81%), Gaps = 3/107 (2%)
Query: 50 NLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKN 109
+LPF+T E L++EFSAFGE+AEVKL+KDE K+SKGYAFIQ+TSQDDA LA+E+MD +
Sbjct: 9 DLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRM 68
Query: 110 LDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQ---DEVADCWY 153
+GR+IY+DIAKPGK F G PRTSGPP++ E+ DEVADCWY
Sbjct: 69 YNGRMIYIDIAKPGKRDFQGLPRTSGPPEKSDEPEEAANDEVADCWY 115
>gi|357490875|ref|XP_003615725.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
gi|355517060|gb|AES98683.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
Length = 149
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 92/125 (73%), Gaps = 4/125 (3%)
Query: 33 LRASLS---NYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAF 89
LR+SLS YPLAS+I+V+NLP+ T E+ LQK+FS FG++AEV++VKD T++SKG AF
Sbjct: 25 LRSSLSMRHEYPLASKILVKNLPYFTGENALQKKFSNFGKIAEVQMVKDVSTERSKGLAF 84
Query: 90 IQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPL-SEQDEV 148
IQYT QDDA+LALE+MD ++ GR I V++ K F G P+ SGPPK+ L + Q E
Sbjct: 85 IQYTCQDDAMLALETMDQQSFYGRTISVELEKLDVHNFVGSPKASGPPKKWNLPAVQVEE 144
Query: 149 ADCWY 153
DCWY
Sbjct: 145 VDCWY 149
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A ++ V L F T E TL FS +G+V E K++ D I++KSKGY F+ + SQD+A A
Sbjct: 30 IAFKLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKA 89
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPK 138
+ M+ K L+GR+++VD AKP R G P GPP+
Sbjct: 90 ITEMNEKALNGRVVFVDYAKPDTKRSMGMPIARGPPE 126
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+AS++ V L F T E L + FS +G+V E K+V D ++ +SKG+ F+ + S+++A A
Sbjct: 32 IASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKA 91
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPK 138
MD K L+GR I+VD AKP D GG P GPP+
Sbjct: 92 RTEMDGKELNGRTIFVDYAKPRADFGGGMPIARGPPE 128
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 61/85 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L F T E TL+ F FG++ EVK++ D+I+K+SKGYAF++YT+++ A AL+
Sbjct: 307 KLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKE 366
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFGG 129
M+ K ++G +I VDIAKP R+GG
Sbjct: 367 MNGKIINGWMIVVDIAKPSPRRYGG 391
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 61/85 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L F T E TL+ F FG++ EVK++ D+I+K+SKGYAF++YT+++ A AL+
Sbjct: 307 KLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKE 366
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFGG 129
M+ K ++G +I VDIAKP R+GG
Sbjct: 367 MNGKIINGWMIVVDIAKPSPRRYGG 391
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A ++ V L F T E+ L + FS +G+V E K+V D ++ +SKG+ F+ + SQD+A A
Sbjct: 27 IAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENA 86
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQD 146
+E M K L+GR+I+VD AKP + G P GPP +P S D
Sbjct: 87 IEDMKGKTLNGRVIFVDYAKPNINTRGEIPIARGPP--EPTSTPD 129
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 14 PMFANSLTN-RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAE 72
P F L N +PC R+ + + +++ V L F T E L + FS FGEV E
Sbjct: 5 PGFRRLLGNYLSSPCPRS----TVFFSRGVTTKLFVGGLSFYTTEKALTEAFSRFGEVVE 60
Query: 73 VKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPR 132
VK+V D ++++SKG+ F+QY S+ DA A M+ K L GR+I+VD KP G P
Sbjct: 61 VKVVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIFVDTVKPKSQLSGDLPS 120
Query: 133 TSGPP 137
+ PP
Sbjct: 121 ATVPP 125
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 59/83 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAF++YT+++ A AL+
Sbjct: 298 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAALKE 357
Query: 105 MDHKNLDGRLIYVDIAKPGKDRF 127
M+ K ++G +I VD+AKP R+
Sbjct: 358 MNGKIINGWMIVVDVAKPNPPRY 380
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 59/83 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAFI+YT+++ A AL+
Sbjct: 318 KLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 377
Query: 105 MDHKNLDGRLIYVDIAKPGKDRF 127
M+ K ++G +I VD+AKP ++
Sbjct: 378 MNGKIINGWMIVVDVAKPTPQKY 400
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 27 CFRTFNLRASLSNYPLA---------SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK 77
F ++RA L P A +++ V L T E+ L + FS +G+V E K+V
Sbjct: 13 SFMLSSIRAKLVAAPTALFIWQRGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVM 72
Query: 78 DEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPP 137
D +SKG+ F+ Y S+D+A AL+ M+ K L+GR+IYVD AK + GG P GPP
Sbjct: 73 DRALDRSKGFGFVTYASEDEAQKALDEMNGKALNGRVIYVDYAKLKTNFGGGIPIARGPP 132
Query: 138 K 138
+
Sbjct: 133 E 133
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 59/83 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAFI+YT+++ A AL+
Sbjct: 224 KLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 283
Query: 105 MDHKNLDGRLIYVDIAKPGKDRF 127
M+ K ++G +I VD+AKP ++
Sbjct: 284 MNGKIINGWMIVVDVAKPTPQKY 306
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 17 ANSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLV 76
+SL N NP + AS + ++ + L F T E TL+ F FGE+ EVK++
Sbjct: 195 GDSLINSANPPDSS---EASQITHVRTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKII 251
Query: 77 KDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFG-GYPR 132
D+I+K+SKGYAF++YT+++ A AL+ M+ K ++G +I VD+AK R+ G PR
Sbjct: 252 MDKISKRSKGYAFVKYTTEEAASSALKEMNGKIINGWMIVVDVAKSNPPRYSRGRPR 308
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+++ V L F T + L + FS +G+V E +V D + +SKG+ F+ + S+D+A A
Sbjct: 29 IATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAHNA 88
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPK 138
L M+ K L+GR+IYVD AKP D P GPP+
Sbjct: 89 LSEMNGKTLNGRVIYVDYAKPRTDSRNEVPIARGPPE 125
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 13/124 (10%)
Query: 24 ENPCFRTFNLRASLSNYPLAS-----------RIMVRNLPFTTHEHTLQKEFSAFGEVAE 72
EN + NL SL N P +S ++ V L F T E TL+ F FGE+ E
Sbjct: 162 ENKDYEGRNLENSL-NMPNSSEASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVE 220
Query: 73 VKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFG-GYP 131
VK++ D+I+K+SKGYAFI+YT+++ A AL+ M+ K ++G +I VD+AK R+ G+
Sbjct: 221 VKVIIDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPPRYNKGHA 280
Query: 132 RTSG 135
R S
Sbjct: 281 RPSA 284
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 59/83 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAFI+Y++++ A AL+
Sbjct: 317 KLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYSTEEAASAALKE 376
Query: 105 MDHKNLDGRLIYVDIAKPGKDRF 127
M+ K ++G +I VD+AKP ++
Sbjct: 377 MNGKIINGWMIVVDVAKPTPQKY 399
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 19 SLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKD 78
L N CF T +AS++ V L F T E L + FS G+V E ++V D
Sbjct: 16 GLINSSASCFFT-------QRRGVASKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMD 68
Query: 79 EITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGG--YPRTSGP 136
++ +SKG+ F+ + S D+A AL + + +GR+I+VD AK K FGG YP GP
Sbjct: 69 RVSDRSKGFGFVTFASVDEAQKALMEFNGQQFNGRVIFVDYAKA-KQSFGGGRYPIARGP 127
Query: 137 P 137
P
Sbjct: 128 P 128
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ V L F T E TL+ F FGE+ EVK++ D I+K+SKGYAF++YT+++ AL++
Sbjct: 302 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKA 361
Query: 105 MDHKNLDGRLIYVDIAKP-GKDRFGG 129
M+ + ++G +I VD+AK +DR G
Sbjct: 362 MNGQIINGWMIVVDVAKTRSRDRLSG 387
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ V L F T E TL+ F FGE+ EVK++ D I+K+SKGYAF++YT+++ AL++
Sbjct: 300 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKA 359
Query: 105 MDHKNLDGRLIYVDIAKP-GKDRFGG 129
M+ + ++G +I VD+AK +DR G
Sbjct: 360 MNGQIINGWMIVVDVAKTRSRDRLSG 385
>gi|359478318|ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|296084274|emb|CBI24662.3| unnamed protein product [Vitis vinifera]
Length = 108
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 25 NPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS 84
+PCFR R S + L + T+E L+ F +GE+ EVK++ D ++ KS
Sbjct: 14 SPCFRWLVSRGSCRKLFIGDA----GLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKS 69
Query: 85 KGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPG 123
KGY F+Q+TS DDA +AL+ MD ++LDGR I V A G
Sbjct: 70 KGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 108
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 56/77 (72%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ V L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAFI+YT++D AL++
Sbjct: 289 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEDAGGAALKA 348
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + ++G +I VD+AK
Sbjct: 349 MNGEIINGWMIVVDVAK 365
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 61/99 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+++ V L + T + L + FS +G+V E +V D ++ KSKG+ F+ + S D+A A
Sbjct: 33 IATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTA 92
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQ 140
L M+ K L+GR+I+V+ AKP G P GPP+++
Sbjct: 93 LSEMNGKPLNGRVIFVNYAKPTTSSRGAIPIARGPPEEK 131
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 61/99 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+++ V L + T + L + FS +G+V E +V D ++ KSKG+ F+ + S D+A A
Sbjct: 33 IATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTA 92
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQ 140
L M+ K L+GR+I+V+ AKP G P GPP+++
Sbjct: 93 LSEMNGKPLNGRVIFVNYAKPTTSSRGAIPIARGPPEEK 131
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Query: 20 LTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDE 79
L N CF T +AS++ + L F T E L + FS G+V E ++V D
Sbjct: 17 LINSSASCFFT-------QRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDR 69
Query: 80 ITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKD--RFGGYPRTSGPP 137
++ +SKG+ F+ + S D+A AL + + L+GR I+VD AK + GGYP GPP
Sbjct: 70 VSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAKAKQSLGGGGGYPIARGPP 129
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
+++ A+R+ V L F T E +L+ F FG++ EV LV D + K+ +G+AF+ YT +++
Sbjct: 59 TSHGAATRLYVSGLSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGFAFLSYTGEEE 118
Query: 98 ALLALESMDHKNLDGRLIYVDIAK 121
A A+E M K LDGR+I+V++AK
Sbjct: 119 ARGAMEGMHGKFLDGRVIFVEVAK 142
>gi|297736978|emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 26 PCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK 85
PC R + + ++RI ++ LP +T E +L+K FS FGEV++V++ +++I+ +
Sbjct: 50 PCLRC----CATDDESSSTRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPL 105
Query: 86 GYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDR 126
G+AF +T+++ A LA++ MD K GR ++V IAKPG +
Sbjct: 106 GFAFAWFTTEESAQLAVKMMDGKFFHGRFVFVKIAKPGPSK 146
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAF++YT+++ A AL+
Sbjct: 285 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASAALKE 344
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K ++G +I VD+AK
Sbjct: 345 MNGKIINGWMIVVDVAK 361
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
gi|223535726|gb|EEF37389.1| RNA binding protein, putative [Ricinus communis]
Length = 371
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 51 LPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNL 110
L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAFI+YT+++ A AL+ M+ K +
Sbjct: 286 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAANAALKEMNGKII 345
Query: 111 DGRLIYVDIAKPGKDRF 127
+G +I VD+AK R+
Sbjct: 346 NGWMIVVDVAKTSPPRY 362
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ V L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAFI+YT+++ AL++
Sbjct: 296 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKA 355
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + ++G +I VD+AK
Sbjct: 356 MNGQIINGWMIVVDVAK 372
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis thaliana]
gi|21536799|gb|AAM61131.1| unknown [Arabidopsis thaliana]
gi|25084257|gb|AAN72206.1| unknown protein [Arabidopsis thaliana]
gi|332642921|gb|AEE76442.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 374
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAF++YT+++ A AL+
Sbjct: 283 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKE 342
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K ++G +I VD+AK
Sbjct: 343 MNGKIINGWMIVVDVAK 359
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ V L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAFI+YT+++ AL++
Sbjct: 266 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKA 325
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + ++G +I VD+AK
Sbjct: 326 MNGQIINGWMIVVDVAK 342
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 56/79 (70%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ V L F T E +L+ F FG++ EV LV D+I + +G+AF++Y++++++ A+E
Sbjct: 79 TRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIE 138
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M K LDGR+I+V++AKP
Sbjct: 139 GMHGKFLDGRVIFVEVAKP 157
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S+I V NLP++ + +LQ FS FGEV K++ D T +SKG+AF++ ++ A A
Sbjct: 27 MSSKIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAA 86
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFG--GY 130
++ ++ +++DGR I V++A+P +DR G GY
Sbjct: 87 IDGLNGQSVDGRSIVVNLARPREDRGGSDGY 117
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 55/79 (69%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V L F T E +L+ F FG++ EVKLV D I + +G+AF++Y +++++ A+E
Sbjct: 88 TKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIE 147
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M K LDGR+I+V++AKP
Sbjct: 148 GMHGKFLDGRVIFVEVAKP 166
>gi|397643662|gb|EJK76002.1| hypothetical protein THAOC_02254 [Thalassiosira oceanica]
Length = 869
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
LA R+ VRNLPFTT E L + FS FG++ V + D+ K++KGYAF+++ S+ DA +A
Sbjct: 321 LADRLFVRNLPFTTTEEELHETFSHFGQINSVHIPVDD-AKRNKGYAFVEFESKKDAKIA 379
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ESMD ++ GRLI++ AKP K+R
Sbjct: 380 MESMDGEDFQGRLIHIMPAKPTKER 404
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++IMVRN+PF L + F +FG++ +V+L K + +G+AF ++ + +A A+
Sbjct: 754 TKIMVRNVPFEATRSELLQLFGSFGQLKKVRLPK-KFDGTHRGFAFCEFVTSKEARNAMT 812
Query: 104 SMDHKNLDGRLIYVDIAK 121
S+ +L GR + ++ A+
Sbjct: 813 SLSQTHLYGRRLVLEWAE 830
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFG-EVAEVKL---------------VKDEITKKSKGYAF 89
I V+NL F T E L+ FS G E VK+ E+ + S G+ F
Sbjct: 643 IYVKNLNFATSEVQLRDAFSQAGLEPRAVKIPTKAAPSRRNASDGGEGSEVRQLSMGFGF 702
Query: 90 IQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPR 132
++++S+D+AL A++ M K +DG + + ++ K GG R
Sbjct: 703 VEFSSEDEALKAIKKMQGKLVDGHSLEIKLST--KSLSGGNSR 743
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
ASR+ V L F T E +L+ F FG++ EV LV + + K+ +G+AF+ Y S++++ A+
Sbjct: 66 ASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAM 125
Query: 103 ESMDHKNLDGRLIYVDIAK 121
E M K LDGR+I+V++A+
Sbjct: 126 EGMQGKFLDGRVIFVEVAR 144
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
ASR+ V L F T E +L+ F FG++ EV LV + + K+ +G+AF+ Y S++++ A+
Sbjct: 69 ASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAM 128
Query: 103 ESMDHKNLDGRLIYVDIAK 121
E M K LDGR+I+V++A+
Sbjct: 129 EGMQGKFLDGRVIFVEVAR 147
>gi|302757806|ref|XP_002962326.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
gi|300169187|gb|EFJ35789.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
Length = 89
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%)
Query: 50 NLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKN 109
L + E +Q+ FS+FGEV EV++VKD T KSKGY FI Y S+ DA AL++MD KN
Sbjct: 1 GLSWGLTEGIVQEAFSSFGEVREVRIVKDRETGKSKGYGFITYVSEADAQDALQAMDGKN 60
Query: 110 LDGRLIYVDIA 120
L+GR I V+ A
Sbjct: 61 LNGREIRVNFA 71
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 56/79 (70%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V L F T E +L+ F FG++ +V LV D++ K+ +G+AF++Y ++++A A+E
Sbjct: 90 TKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIE 149
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M K LDGR+I+V++AKP
Sbjct: 150 GMHGKFLDGRVIFVEVAKP 168
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ ++ + L E TL + F+ +G+V E +V D++T +SKG+ F+++ S+++A A
Sbjct: 34 ITHKLFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKA 93
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGY-PRTSGPPK 138
+ M+ K L+GR+IYVDIAK +DR P SGPPK
Sbjct: 94 RDEMNGKVLNGRVIYVDIAKAKQDRATDVLPIASGPPK 131
>gi|356563602|ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 160
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 NYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDA 98
N P + +I V+ LP +T E L K FS FGEV ++L D+ + +S G+A+I + ++ A
Sbjct: 63 NLPSSPKIFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESA 122
Query: 99 LLALESMDHKNLDGRLIYVDIAKPGKDR 126
LA+ M+ K GR IYV IAKPG +
Sbjct: 123 QLAVLEMNGKFFYGRFIYVTIAKPGSSK 150
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ + L E +L + FS +G+V E +V D++T + KG+ F+++ S++ A A E
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 105 MDHKNLDGRLIYVDIAKPGKDR-FGGYPRTSGPPK 138
M+ K L+GR+IYVDIAK +R PR +GPPK
Sbjct: 98 MNGKVLNGRVIYVDIAKAKMNRTTDSSPRATGPPK 132
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 58/80 (72%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V L T + +L++ FS FG++ E +L++D T++ KG+ FI + S+DDA A
Sbjct: 5 ISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKA 64
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L+S+D K +DGRLI+V++AK
Sbjct: 65 LKSLDGKIVDGRLIFVEVAK 84
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 57/79 (72%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V L T E TLQ FS +G+V +V+++ ++ T++SKG+ F++++++++A AL+
Sbjct: 88 NKLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEEEANTALK 147
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M+ K L+G LI VDIAKP
Sbjct: 148 EMNGKILNGWLISVDIAKP 166
>gi|392563575|gb|EIW56754.1| hypothetical protein TRAVEDRAFT_127405 [Trametes versicolor
FP-101664 SS1]
Length = 784
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ +RNLPFT E L++ F +G+V++ L+ D TK+SKG A+I Y + D AL A E
Sbjct: 255 SRLFIRNLPFTCTEDELRELFQRYGDVSQAHLILDPATKQSKGLAYISYANPDSALGAYE 314
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDE 147
++D + GRL+++ P DR G G K++ L + E
Sbjct: 315 ALDKTSFQGRLLHI---LPAVDRRGKEADAEGEGKKKTLKQDRE 355
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++++V+N+PF + +++ F A ++ V++ + + +++G+AF+++T++ +A A
Sbjct: 664 TKMIVKNVPFEATKKDIRELFGAHAQLKSVRVPR-KFDHRTRGFAFLEFTTRHEAERAYA 722
Query: 104 SMDHKNLDGRLIYVDIAKPGK 124
++ H + GR + ++ A+ G+
Sbjct: 723 TLRHTHFLGRHLVLEWAEEGE 743
>gi|224109824|ref|XP_002315325.1| predicted protein [Populus trichocarpa]
gi|222864365|gb|EEF01496.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NL F+ L FS FG+VA V ++KD T+KS+G AFIQ+ S+ DA+
Sbjct: 6 PSKSTLYVSNLDFSLTNSDLHTLFSTFGKVARVTVLKDRTTRKSRGVAFIQFVSRSDAVT 65
Query: 101 ALESMDHKNLDGRLIYVDIA 120
A+E MD K L+GR + IA
Sbjct: 66 AVEQMDKKILNGRTLSASIA 85
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 55/79 (69%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ V L F T E +L+ F FG++ +V LV D++ + +G+AF++Y +++++ A+E
Sbjct: 94 TRLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIE 153
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M K LDGR+I+V++AKP
Sbjct: 154 GMHGKFLDGRVIFVEVAKP 172
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 54/79 (68%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V L + T +H+L+ EF+ +GEV E +++ D + +S+G+ F+ YTS ++A A
Sbjct: 28 MSSKLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAA 87
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ +MD K LDGR I V+ A
Sbjct: 88 ITAMDGKTLDGRSIRVNHA 106
>gi|361067299|gb|AEW07961.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126579|gb|AFG43909.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126581|gb|AFG43910.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126583|gb|AFG43911.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126585|gb|AFG43912.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126587|gb|AFG43913.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126589|gb|AFG43914.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126591|gb|AFG43915.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 57 EHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIY 116
E L + FS FGEV EVK+V D ++++SKG+ F+QY S+ DA A M+ K L GR+I+
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 117 VDIAKPGKDRFGGYPRTSGPP 137
VD KP G P ++ P
Sbjct: 61 VDDVKPKSQLSGDLPSSTVSP 81
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L E +L + FS +G+V E +V+D++T KG+ F+++ S ++A A E
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFG-GYPRTSGPPKQQPLS 143
M+ K L+GR+IYVDIAK +DR P GPPK P+S
Sbjct: 96 MNGKALNGRVIYVDIAKARQDRAADALPIARGPPK--PIS 133
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI + NLPF E ++KEF FG +AE+ L D+ITKKSKG+ F+ + DA+ A
Sbjct: 187 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNE 246
Query: 105 MDHKNLDGRLIYVDIAK--PGKDRFGGYPRTSGPPKQQPL 142
MD+K + GR+++V AK P ++ G + KQ L
Sbjct: 247 MDNKFIKGRIVHVTYAKADPYSNQQVGESKNYKEKKQNEL 286
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKL--VKDEITKKSKGYAFIQYTSQDDALLALE 103
+ V+N+ F T E ++K F G V V L KD+ +K+ G+ F++Y +DA+ A++
Sbjct: 518 LYVKNISFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYAKHEDAINAIK 577
Query: 104 SMDHKNLDGRLIYVDIAKP 122
++ K +DG + ++I++P
Sbjct: 578 TLQGKVIDGHAVQIEISQP 596
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R + + ++++++V+N+PF T+ +++ F +G + V+L K ++ ++KG+AF++Y
Sbjct: 606 RKEIEEHKVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYA 664
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAK 121
++ +A A+ ++ + + GR + ++ AK
Sbjct: 665 TKQEAANAMAALKNSHFYGRHLIIEYAK 692
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SRI+++NLP E L+++F FG + + K+++ S+ + FI + ++D A A+
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAIT 60
Query: 104 SMDHKNLDGRLIYVDIAKPGKDR 126
M+ + + V +AK D+
Sbjct: 61 KMNGAYIQSSKLQVSLAKAIGDQ 83
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L E +L + FS +G+V E +V+D++T KG+ F+++ S ++A A E
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFG-GYPRTSGPPK 138
M+ K L+GR+IYVDIAK +DR P GPPK
Sbjct: 96 MNGKALNGRVIYVDIAKARQDRAADALPIARGPPK 130
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 12 PQPMFANSLTNRENPCFRTFNLRASLSNYPLAS---RIMVRNLPFTTHEHTLQKEFSAFG 68
P P+ N+ + P R+ L +AS ++ V L F T+E +L++ FS +G
Sbjct: 2 PLPLPGNAALSLPGPSLPDSRPRSCLWKAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYG 61
Query: 69 EVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKD 125
+++EV +VKD T++S+G+ F+ + + DDA A+ +M+ K++DGR I VD A D
Sbjct: 62 QISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSD 118
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + L + T E+TL+ FS+FG V EVK++ D T +S+G+ F+ +TS ++A +AL
Sbjct: 44 SSKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVAL 103
Query: 103 ESMDHKNLDGRLIYVDIA--KPGKDRFGG 129
+ MD + L GR I VD A K + R GG
Sbjct: 104 QEMDGRELAGRQIRVDYATDKARETRGGG 132
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI + NLPF E ++KEF FG +AE+ L D+ITKKSKG+ F+ + DA+ A
Sbjct: 188 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNE 247
Query: 105 MDHKNLDGRLIYVDIAK 121
MD+K + GR+++V AK
Sbjct: 248 MDNKFIKGRIVHVTYAK 264
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKL--VKDEITKKSKGYAFIQYTSQDDALLALE 103
+ V+N+ F T E ++K F G V + L KD+ +K+ G+ F++Y +DA+ A++
Sbjct: 506 LYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAIK 565
Query: 104 SMDHKNLDGRLIYVDIAKP 122
++ K +DG + ++I++P
Sbjct: 566 TLQGKVIDGHAVQIEISQP 584
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R + + ++++++V+N+PF T+ +++ F +G + V+L K ++ ++KG+AF++Y
Sbjct: 594 RKEIEEHKVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYA 652
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAK 121
++ +A A+ ++ + + GR + ++ AK
Sbjct: 653 TKQEAANAMAALKNSHFYGRHLIIEYAK 680
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SRI+++NLP E L+++F FG + + K+++ S+ + FI + ++D A A+
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAIT 60
Query: 104 SMDHKNLDGRLIYVDIAKPGKDR 126
M+ + + V +AK D+
Sbjct: 61 KMNGAYIQSSKLQVSLAKAIGDQ 83
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI + NLPF E ++KEF FG +AE+ L D+ITKKSKG+ F+ + DA+ A
Sbjct: 187 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNE 246
Query: 105 MDHKNLDGRLIYVDIAK--PGKDRFGGYPRTSGPPKQQPL 142
MD+K + GR+++V AK P + G + KQ L
Sbjct: 247 MDNKFIKGRIVHVTYAKADPYSSQQTGESKNYKEKKQNEL 286
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKL--VKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++NL F T E ++K F G V V L KD+ +K+ G+ F++Y +DA+ A++
Sbjct: 518 LYIKNLSFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYARHEDAINAIK 577
Query: 104 SMDHKNLDGRLIYVDIAKP 122
++ K +DG + ++I++P
Sbjct: 578 TLQGKVIDGHAVQIEISQP 596
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R + + ++++++V+N+PF T+ +++ F +G + V+L K ++ ++KG+AF++Y
Sbjct: 606 RKEIEEHKVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYA 664
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAK 121
++ +A A+ ++ + + GR + ++ AK
Sbjct: 665 TKQEAANAMAALKNSHFYGRHLIIEYAK 692
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SRI+++NLP E L+++F FG + + K+++ S+ + FI + ++D A A+
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGVSRKFGFIGFENEDQAQTAIT 60
Query: 104 SMDHKNLDGRLIYVDIAKPGKDR 126
M+ + + V +AK D+
Sbjct: 61 KMNGAYIQSSKLQVSLAKAIGDQ 83
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI + NLPF E ++KEF FG +AE+ L D+ITKKSKG+ F+ + DA+ A
Sbjct: 188 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNE 247
Query: 105 MDHKNLDGRLIYVDIAK 121
MD+K + GR+++V AK
Sbjct: 248 MDNKFIKGRIVHVTYAK 264
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKL--VKDEITKKSKGYAFIQYTSQDDALLALE 103
+ V+N+ F T E ++K F G V + L KD+ +K+ G+ F++Y +DA+ A++
Sbjct: 506 LYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAIK 565
Query: 104 SMDHKNLDGRLIYVDIAKP 122
++ K +DG + ++I++P
Sbjct: 566 TLQGKVIDGHAVQIEISQP 584
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R + + ++++++V+N+PF T+ +++ F +G + V+L K ++ ++KG+AF++Y
Sbjct: 594 RKEIEEHKVSNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPK-KVDGQNKGFAFVEYA 652
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAK 121
++ +A A+ ++ + + GR + ++ AK
Sbjct: 653 TKQEAANAMAALKNSHFYGRHLIIEYAK 680
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SRI+++NLP E L+++F FG + + K+++ S+ + FI + ++D A A+
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGNSRKFGFIGFENEDQAQTAIT 60
Query: 104 SMDHKNLDGRLIYVDIAKPGKDR 126
M+ + + V +AK D+
Sbjct: 61 KMNGAYIQSSKLQVSLAKAIGDQ 83
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 60/84 (71%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V L T + +L++ FS FG++ E +L++D T++ KG+ FI + S+DDA A
Sbjct: 5 ISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKA 64
Query: 102 LESMDHKNLDGRLIYVDIAKPGKD 125
L+S+D K ++GRLI+V++AK ++
Sbjct: 65 LKSLDGKIVEGRLIFVEVAKSSEE 88
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
Query: 34 RASLSNYP--------LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK 85
R S+S+ P ++S++ V L + T + TL+ FS +G+V E +++ D T KSK
Sbjct: 13 RTSVSSNPSLLQAVRCMSSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSK 72
Query: 86 GYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAK 121
GY FI YTS ++A A+ +MD K+L GR++ V A
Sbjct: 73 GYGFITYTSSEEAAAAVTAMDGKDLQGRIVRVSTAN 108
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L + T +H+L+ EF+ +G+V E K++ D + +S+G+ FI YTS ++A A+
Sbjct: 33 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAI 92
Query: 103 ESMDHKNLDGRLIYVDIA 120
+MD K LDGR I V+ A
Sbjct: 93 TAMDGKTLDGRNIRVNHA 110
>gi|304311883|ref|YP_003811481.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
gi|301797616|emb|CBL45837.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
Length = 92
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + E L++ F AFGEVA V L+KD+ T +SKG+ F++ + +A A++ M
Sbjct: 3 IYVGNLAYGVSEEELKEAFGAFGEVASVSLIKDKFTGQSKGFGFVEMPNNSEADAAIKGM 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ K L GR I V+ AKP +DR
Sbjct: 63 NDKPLKGRPIKVNQAKPREDR 83
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ + L F T E +L+ F FG++ EV LV D + K+ +G+AF+ Y +++++ A+E M
Sbjct: 118 LFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEESKNAMEGM 177
Query: 106 DHKNLDGRLIYVDIAK 121
K LDGR+I+V++AK
Sbjct: 178 HGKFLDGRVIFVEVAK 193
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + LP++T + TL+ FS FGEV E +++ D T +S+G+ F+ Y S ++A AL
Sbjct: 35 SSKLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEAL 94
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+MD +NL GR + V A+
Sbjct: 95 SAMDGQNLGGRTVRVSFAE 113
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L + T +H+L+ EF+ +G+V E K++ D + +S+G+ FI YTS ++A A+
Sbjct: 30 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAI 89
Query: 103 ESMDHKNLDGRLIYVDIA 120
+MD K LDGR I V+ A
Sbjct: 90 TAMDGKTLDGRNIRVNHA 107
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 13 QPMFANSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAE 72
Q FA+S++ P FN +SN ++ V L + T++ +L++ FS+FGEV E
Sbjct: 13 QSAFASSVSAGSAPAM--FNAARFMSN-----KLFVGGLSWGTNDGSLKEAFSSFGEVYE 65
Query: 73 VKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
+++ D T +S+G+ F+++++++DA A SMD + LDGR + V+ A
Sbjct: 66 ARVITDRETGRSRGFGFVEFSNEEDAKKAASSMDGQELDGRSVRVNFA 113
>gi|297806589|ref|XP_002871178.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
gi|297317015|gb|EFH47437.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP+T E L + FS FGE++EV LV D+ TK S+G AF+ Y + A A+E
Sbjct: 213 RLFVRNLPYTATEEELTEHFSKFGEISEVHLVLDKETKNSRGMAFVLYQIPEYAKRAMEE 272
Query: 105 MDHKNLDGRLIYVDIAK 121
+D+K+ GRL+++ AK
Sbjct: 273 LDNKDFQGRLLHILPAK 289
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G++AEV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP+T E L++ FS FG +++V LV D+ TK+SKG A+I YT + A ALE
Sbjct: 264 RLFVRNLPYTAIEDELEEHFSKFGNISQVHLVVDKDTKRSKGLAYIHYTLPESAARALEE 323
Query: 105 MDHKNLDGRLIYVDIAK 121
+D+ GRL++V AK
Sbjct: 324 LDNSIFQGRLLHVMPAK 340
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++++VRN+ F E L++ F FG++ ++L +G+AF++Y ++ +A AL
Sbjct: 677 STKLLVRNVAFEATEKDLRQLFGPFGQIKSLRLPMK--FGNHRGFAFVEYVTKQEAQNAL 734
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
+++ +L GR + ++ AK G+
Sbjct: 735 QALSSTHLYGRHLVLERAKEGE 756
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L E +L + FS +G+V E +V+D++T KG+ F+++ S ++A A E
Sbjct: 36 KLFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNAREE 95
Query: 105 MDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLS 143
M+ K L+GR+IYVDIAK DR P GPPK P+S
Sbjct: 96 MNGKALNGRVIYVDIAKAKPDRATDALPIARGPPK--PIS 133
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FG V E +VKD T +S+G+ F++YT++DDA A+
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAIS 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V L + + TL++ F+ FG+V E K++ D T +S+G+ F+ + S D+A A
Sbjct: 37 MSSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAA 96
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+E+MD K+L GR I V+IA+
Sbjct: 97 VEAMDGKDLQGRSIRVNIAQ 116
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E +L F +G + +V +++D+ T +S+G+ F++Y + DDA ALE
Sbjct: 5 GKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALE 64
Query: 104 SMDHKNLDGRLIYVDIAKPG 123
M+ K LDGR I VD A G
Sbjct: 65 GMNGKTLDGRAIRVDEAGKG 84
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRFGGY 130
M+ K++DGR I VD A K +R GY
Sbjct: 79 MNGKSVDGRQIRVDQAGKSSDNRSRGY 105
>gi|356554642|ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
Length = 824
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+ T E L++ FS FG V++V LV D+ TK+SKG A+I YT+ D A A
Sbjct: 286 SCRLFVRNLPYMTTEEELEEHFSRFGSVSQVHLVVDKDTKRSKGIAYILYTAPDIAARAQ 345
Query: 103 ESMDHKNLDGRLIYV 117
E +D+ GRL++V
Sbjct: 346 EELDNSIFQGRLLHV 360
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++ ++N+ F E L++ FS FG++ ++L +G+AF++Y +Q +A A
Sbjct: 697 STKLHIKNVAFEATEKDLRRLFSPFGQIKSLRLPMK--FGSHRGFAFVEYVTQQEAKNAR 754
Query: 103 ESMDHKNLDGRLIYVDIAK 121
E++ +L GR + ++ AK
Sbjct: 755 EALASTHLYGRHLLIEHAK 773
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEV-AEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
SRI V+NLP E L++ FS G + +VKL++ + KS+ +AFI Y ++D+A A+
Sbjct: 18 SRICVKNLPKDVGEDELREFFSGKGGIITDVKLMRTK-DGKSRQFAFIGYRTEDEAQEAI 76
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDEV 148
+ L I ++A+ D PR P + E D+V
Sbjct: 77 RYFNKNFLRTSRIICEVARKHGD--ANLPR---PWSRHSKKEDDKV 117
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V L + T + +L+ F++FGEV E +++ D T KS+G+ F+ +++ DDA A
Sbjct: 35 MSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNA 94
Query: 102 LESMDHKNLDGRLIYVDIA--KPGKDR 126
+ SMD + L+GR I+V+ A +P +R
Sbjct: 95 MSSMDGQELEGRNIHVNFANERPAGNR 121
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 64/95 (67%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V NLP++ ++ +L+ FS FG VA K++ D + +SKG+ F++ S+ +A A
Sbjct: 1 MSSKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGP 136
+ ++ +++DGR I V++++P + GG R++GP
Sbjct: 61 INGLNGQSVDGRQIVVNVSRPKEGGGGGGYRSNGP 95
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRFGGY 130
M+ K++DGR I VD A K ++R GY
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGY 93
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 34 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 93
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 94 MNGKSVDGRQIRVDQAGKSSD 114
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NLP+T E L+ FS FGEVA ++ D+ + +SKG+ F++ D A A+ESM
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESM 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+K+ GR I V+ AKP ++R
Sbjct: 63 HNKDFKGRSIMVNEAKPREER 83
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 40 YPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDAL 99
Y +SR+ + L + + +L++ F+ +GEV E +++ D T +S+G+ FI +TS ++A
Sbjct: 36 YMSSSRLFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAA 95
Query: 100 LALESMDHKNLDGRLIYVDIA 120
A+ MD K+L GRL++V+ A
Sbjct: 96 AAITGMDGKDLHGRLVHVNYA 116
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 79 MNGKSVDGRQIRVDQAGKSSD 99
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRFGGY 130
M+ K++DGR I VD A K ++R GY
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGY 93
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRFGGY 130
M+ K++DGR I VD A K ++R GY
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGY 93
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRFGGY 130
M+ K++DGR I VD A K ++R GY
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGY 93
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRFGGY 130
M+ K++DGR I VD A K ++R GY
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGY 93
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|391335607|ref|XP_003742181.1| PREDICTED: probable RNA-binding protein 19-like [Metaseiulus
occidentalis]
Length = 836
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ +RNLP+TT E+ L+ F FG +AE+ L D ITKK KG+AF+ Y + A+ A ++
Sbjct: 301 RLFIRNLPYTTTENELEDLFKPFGPIAELHLSIDSITKKPKGFAFVAYVFPEHAMKAHQA 360
Query: 105 MDHKNLDGRLIYV--DIAKP-----GKDRFGGYPRTSGPPKQQPLSEQDEVADCW 152
+D+ GRL+++ +AK KD+ G +T KQ L Q A W
Sbjct: 361 LDYTTFHGRLLHIIPGLAKQEDPLLSKDKAGSSFKTE---KQAKLRSQSGSAHSW 412
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK-----SKGYAFIQYTSQDD 97
S + V+NL F+T LQ+ FS V + + ++ S GY F+Q+ S+ D
Sbjct: 612 GSVLFVKNLNFSTTNDVLQRHFSKCATVVQATVATKSDPRQPGKTLSMGYGFVQFKSKQD 671
Query: 98 ALLALESMDHKNLDGRLIYVDIAK 121
A++AL+ + H LD + + +++
Sbjct: 672 AMMALKKLQHSTLDSHTLGLKVSR 695
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS---KGYAFIQYTSQDDAL 99
+++I+VRN+PF + + + F+ FGE+ V+L K S +G+AF+++ ++ DA
Sbjct: 714 STKILVRNVPFQANRKEIFELFAVFGELKTVRLPKKMFGGDSGSHRGFAFVEFITKSDAK 773
Query: 100 LALESM-DHKNLDGRLIYVDIA 120
A +S+ +L GR + ++ A
Sbjct: 774 RAFDSLCQSTHLYGRRLVLEWA 795
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|297804178|ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315809|gb|EFH46232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 788
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 33 LRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQY 92
L+A + R+ VRNLP+T E L + FS FGE++EV LV D+ TK+S+G A+I Y
Sbjct: 254 LKADSDDVLDTGRLFVRNLPYTATEEELMEHFSKFGEISEVHLVLDKETKRSRGIAYILY 313
Query: 93 TSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPK--QQPLSEQDEVAD 150
+ A A+E +D+ + GRL++V AK + TS PK +Q EQ + ++
Sbjct: 314 PIPECAARAMEELDNSSFQGRLLHVLPAKHRETSDKQVNDTSNLPKTFKQKREEQRKASE 373
Query: 151 C 151
Sbjct: 374 A 374
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++ V+N+ F + L++ FS FG++ ++L K I + + G+AF+++ ++ +AL A
Sbjct: 672 STKLHVKNVAFEATKKELKQLFSPFGQIKSMRLPKRNIEQYA-GFAFVEFVTKQEALNAK 730
Query: 103 ESMDHKNLDGRLIYVDIA 120
+++ + GR + ++ A
Sbjct: 731 KALSSTHFYGRHLVLEWA 748
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 28 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 87
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 88 MNGKSVDGRQIRVDQAGKSSD 108
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E +L F +G + +V +++D+ T +S+G+ F++Y + DDA ALE
Sbjct: 5 GKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALE 64
Query: 104 SMDHKNLDGRLIYVDIAKPG 123
M+ K LDGR I VD A G
Sbjct: 65 GMNGKTLDGRAIRVDEAGKG 84
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 54 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 113
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 114 MNGKSVDGRQIRVDQAGKSSD 134
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRFGGY 130
M+ K++DGR I VD A K ++R GY
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGY 93
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T+E +L++ FS +G++AEV +VKD T++S+G+ F+ + + DDA A+
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR I VD A
Sbjct: 66 AMNGKSVDGRQIRVDQA 82
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 54/80 (67%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V L F T E + FS+FG V E +L++D+ T + KG+ F++Y+SQ +A A
Sbjct: 4 FSTEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKA 63
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+++MD + L GRLI+V++AK
Sbjct: 64 VKAMDGRILRGRLIFVEMAK 83
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 24 ENPCFRTFNLRASLSNYP--LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
E+P F A +SN P A ++ + L T + L+ F+ FG++ E K++ D I+
Sbjct: 45 ESPLSSVFGDGAEVSNVPPLTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRIS 104
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRT 133
+SKG+ F++Y + ++A A + M+ K LDG +I+VD AKP + + P T
Sbjct: 105 GRSKGFGFVRYATLEEAENARQEMNAKFLDGWVIFVDPAKPRQQKPAPRPDT 156
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T+E +L++ FS +G++AEV +VKD T++S+G+ F+ + + DDA A+
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR I VD A
Sbjct: 66 AMNGKSVDGRQIRVDQA 82
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI+V NLP+ E +++ F FGE+ EV L D+++ K+KG+AF+ Y DA+ A
Sbjct: 214 RILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNE 273
Query: 105 MDHKNLDGRLIYVDIAK 121
MD + + GR+I+V+ AK
Sbjct: 274 MDGQVIKGRIIHVNYAK 290
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK--SKGYAFIQYTSQDDALLA 101
SRI+V+ LP E T+++ F +FG + + KLV+ TK+ S+ +AF+ ++++ +A A
Sbjct: 2 SRIIVKGLPHVATEKTIKEAFQSFGNITDCKLVR---TKEGVSREFAFLGFSTESEAQNA 58
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+E M++ + I V IAK D+
Sbjct: 59 IEKMNNAYILSSKINVSIAKKIGDK 83
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R + +++++V+NLPF T+ + +++ F +G + V++ K +I + KGYAFI+Y
Sbjct: 594 RKKAEDVTASTKLLVKNLPFETNLNEVRELFRVYGTLRGVRVPK-KIDGQLKGYAFIEYA 652
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAK 121
++ +A A +M + +L GR + ++ AK
Sbjct: 653 TKQEAANAKAAMANSHLYGRHLVIEFAK 680
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ ++N+ T E TL+K F+ +G++ V + K+ + K+ + F+++ AL A+++
Sbjct: 509 LYIKNVNPKTTEDTLRKVFTQYGQIHSVSISKNPTSSKN-VFCFLEFARHSSALNAMKNA 567
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPR 132
+ +DG I ++++ P KD F R
Sbjct: 568 QGQLVDGNAIAIELSIPKKDDFTHAKR 594
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|115388597|ref|XP_001211804.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
gi|114195888|gb|EAU37588.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
Length = 812
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
++ N L++R+ VRNLP+ T E L+ F FG V E+ + D SKG+A+IQY
Sbjct: 281 NIENIRLSARLFVRNLPYDTTEADLEPVFGPFGRVEEIHVAFDTRVSSSKGFAYIQYVDP 340
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A +++D KN GRL+++
Sbjct: 341 DAAVEAYKALDGKNFQGRLMHI 362
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 690 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 748
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 749 ALKNTHLLGRRLVLEFA 765
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
R P + LS+ + ++ V L T + L++ FS+FG++ E K++ D +
Sbjct: 12 RHTPLVHSHYASIRLSSTLTSPKLFVSGLSRLTKDENLKEAFSSFGQLVEAKVITDRASG 71
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDR 126
+SKG+AF+ YT+ ++A A E M+ K LDG +I+VD AKP + R
Sbjct: 72 RSKGFAFVTYTTIEEAERAREGMNAKFLDGWVIFVDPAKPREPR 115
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V L + + L++ FS FG+V E +++ D T KS+G+ F+ YTS D A A
Sbjct: 35 MSTKLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAA 94
Query: 102 LESMDHKNLDGRLIYVDIA--KPGKDR 126
+ MD K +DGR + V+IA +P +R
Sbjct: 95 ISGMDGKEIDGRPVRVNIANDRPAGNR 121
>gi|361067297|gb|AEW07960.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 57 EHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIY 116
E L + FS FGEV EVK+V D ++++SKG+ F+QY S+ DA A M+ K L GR+I+
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 117 VDIAKPGKDRFGGYPRTSGPP 137
VD K G P ++ P
Sbjct: 61 VDDVKAKSQLSGDLPSSTVSP 81
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E +L++ FS +G++AEV +VKD T++S+G+ F+ + + DDA A+
Sbjct: 6 GKLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65
Query: 104 SMDHKNLDGRLIYVDIAKPGKD 125
+M+ K++DGR I VD A D
Sbjct: 66 AMNGKSVDGRQIRVDQAGKAAD 87
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E +L++ FS +G+V+EV++++D T S+G+ F+ + S DDA AL S
Sbjct: 6 KLFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTS 65
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ ++L+GR I VD A+
Sbjct: 66 MNGRSLEGRQIRVDRAEK 83
>gi|221065733|ref|ZP_03541838.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|264678761|ref|YP_003278668.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
gi|220710756|gb|EED66124.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|262209274|gb|ACY33372.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
Length = 113
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++++I V NLP++ + +L+ F+ FG V K++ D T +SKG+AF++ TS D+ A
Sbjct: 1 MSTKIYVGNLPYSVTDSSLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKD--RFGG 129
+ + ++DGR I V++AKP ++ FGG
Sbjct: 61 ISGLHGMSVDGRSIVVNLAKPREEGRGFGG 90
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + LP++ + TL+ FS FGEV E +++ D T +S+G+ F+ Y S ++A AL
Sbjct: 35 SSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEAL 94
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+MD +NL GR + V A+
Sbjct: 95 SAMDGQNLGGRTVRVSFAE 113
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 14 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 74 MNGKSVDGRQIRVDQAGKSSD 94
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+ T E L++ F +G V+EV LV D+ T++SKG A+I YT + A AL
Sbjct: 290 SGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRAL 349
Query: 103 ESMDHKNLDGRLIYV 117
E +D+ GRL++V
Sbjct: 350 EELDNSIFQGRLLHV 364
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++++VRN+ F L++ FS +G++ ++L K +G+AF+++ ++ +A A
Sbjct: 705 STKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMK--FGKHRGFAFVEFVTKQEAQNAF 762
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
+++ + +L GR + ++ AK G+
Sbjct: 763 QALSNTHLYGRHLVLERAKEGE 784
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
SRI V+NLP ++ L+ FS GE+ +VKL++ + KS+ +AFI + ++ +A A+
Sbjct: 6 SRICVKNLPKYIDDNRLRTLFSEKGEITDVKLMRTK-DGKSRQFAFIGFRTEHEAQEAI 63
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+ T E L++ F +G V+EV LV D+ T++SKG A+I YT + A AL
Sbjct: 290 SGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRAL 349
Query: 103 ESMDHKNLDGRLIYV 117
E +D+ GRL++V
Sbjct: 350 EELDNSIFQGRLLHV 364
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++++VRN+ F L++ FS +G++ ++L K +G+AF+++ ++ +A A
Sbjct: 702 STKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMK--FGKHRGFAFVEFVTKQEAQNAF 759
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
+++ + +L GR + ++ AK G+
Sbjct: 760 QALSNTHLYGRHLVLERAKEGE 781
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
SRI V+NLP ++ L+ FS GE+ +VKL++ + KS+ +AFI + ++ +A A+
Sbjct: 6 SRICVKNLPKYIDDNRLRTLFSEKGEITDVKLMRTK-DGKSRQFAFIGFRTEHEAQEAI 63
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|299530322|ref|ZP_07043747.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
gi|298721693|gb|EFI62625.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
Length = 113
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++++I V NLP++ + L+ F+ FG V K++ D T +SKG+AF++ TS D+ A
Sbjct: 1 MSTKIYVGNLPYSVTDSNLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKD--RFGG 129
+ ++ ++DGR I V++AKP ++ FGG
Sbjct: 61 ISALHGMSVDGRSIVVNLAKPREEGRGFGG 90
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E +L++ F +G+++EV +VKD TK+S+G+ F+ + + +DA A+E+
Sbjct: 8 KLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDAMEA 67
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 68 MNGKSVDGRQIRVDQA 83
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ RI VRNL ++T E L+K FS FG+++E+ + D +KKSKG AFI Y ++A+ AL
Sbjct: 360 SGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQAL 419
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
MD K GRLI+V PGK
Sbjct: 420 NDMDGKVFQGRLIHV---LPGK 438
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S+I+++NLPF + ++K F+A+GE+ V++ K + +G+ F+++ ++++A A+
Sbjct: 794 SSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEEAKNAM 852
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
E++ + + GR + + A+ K+
Sbjct: 853 EALGNSHFYGRHLVLQYAEQDKN 875
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
++V+N+PF T EH L + FS FGE++ V + ++ A I+Y ++A + +++
Sbjct: 555 LLVKNIPFKTQEHELHELFSKFGELSRV------VLSPARTIALIEYIHPNEAKVGFKNL 608
Query: 106 DHKNLDGRLIYVDIAKPG 123
+ +Y++ A G
Sbjct: 609 AYSKFHHVPLYLEWAPEG 626
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 24 ENPCFRTFNLRASLSNYP--LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
E+P F A +SN P A ++ + L T + L+ F+ FG++ E K++ D I+
Sbjct: 45 ESPLSSVFGDGAEVSNVPPLTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRIS 104
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRT 133
+SKG+ F++Y + ++A A + M+ K LDG +I+VD AKP + + P T
Sbjct: 105 GRSKGFGFVRYATLEEAENARQEMNAKFLDGWVIFVDPAKPRQQKPAPRPDT 156
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V L F T E TL+ F FG + + +V D++ + KG+AF++Y ++++A+ A++
Sbjct: 77 TKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQ 136
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGP-PKQQP 141
M K LDGR+I+V+ AK D PR P P+ +P
Sbjct: 137 GMHGKFLDGRVIFVEEAKTRSDMSRAKPRRDFPKPQSKP 175
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NLP++ E +L++ F FG+V+ K+V D+I+ +SKG+AF+ ++ ++ A+E +
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 106 DHKNLDGRLIYVDIAKP-----GKDRFGGY-PR 132
+ LDGR I V+ AKP K R GG+ PR
Sbjct: 63 NGHELDGRTIVVNKAKPRAPRDSKPRSGGFQPR 95
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like [Ornithorhynchus
anatinus]
Length = 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR I VD A
Sbjct: 66 AMNGKSVDGRQIRVDQA 82
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+S++ + L + T E L+ FS FGE+ EV++++D T +S+G+ F+ Y + +A A
Sbjct: 35 FSSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKA 94
Query: 102 LESMDHKNLDGRLIYVDIA---KPG 123
+E+MD + LDGR I V+ A +PG
Sbjct: 95 MEAMDGRVLDGRTIRVNYATQRQPG 119
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+AS + V+ + F+T E TL + FS FGEV E K++ D+ + KG+A++ +T +D+A A
Sbjct: 32 IASTLFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKA 91
Query: 102 LESMDHKNLDGRLIYVDIA 120
L M+ K +DGR + VD A
Sbjct: 92 LTEMNGKVVDGRTVLVDYA 110
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V L F T E TL+ F FG++ + LV D++ + +G+AF++Y ++++A+ A++
Sbjct: 77 TKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQ 136
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGP-PKQQP 141
M K LDGR+I+V+ AK D PR P P+ +P
Sbjct: 137 GMHGKFLDGRVIFVEEAKTRSDISRAKPRPDFPKPQSKP 175
>gi|148695099|gb|EDL27046.1| mCG129611 [Mus musculus]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++V L F THE L+ FS+FG ++EV +VKD T++S G+ FI +T+ + A A+
Sbjct: 25 GKLVVGGLNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASDAMR 84
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 85 AMNGESLDGRQIRVDHA 101
>gi|365088445|ref|ZP_09327889.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363417101|gb|EHL24188.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 111
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S+I V NLP++ + +LQ FS FG V+ K++ D T +SKG+ F++ + + A A
Sbjct: 1 MSSKIYVGNLPYSVTDASLQSNFSEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR--FGGY 130
+ + ++DGR I V++A+P ++R GGY
Sbjct: 61 ISGLHGMSVDGRTIVVNLARPREERSDAGGY 91
>gi|297812083|ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319762|gb|EFH50184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P++S + V+ + E L+K FS FG+V VK++ +E T++S GY ++ + ++DA L
Sbjct: 73 PISS-VFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIINERTRQSLGYGYVWFNRKEDAQL 131
Query: 101 ALESMDHKNLDGRLIYVDIAKPGKDR 126
A+E+M+ K DGR I V +PG R
Sbjct: 132 AVEAMNGKFFDGRFILVKFGQPGLSR 157
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
+N +SR+ V+ + F++ +L + FS FGE+ EV ++KD+ + KGYA++ + ++++
Sbjct: 28 TNSASSSRLFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAYVTFATENE 87
Query: 98 ALLALESMDHKNLDGRLIYVD 118
A AL M+ K +DGR ++VD
Sbjct: 88 AKKALTEMNGKVIDGRPVFVD 108
>gi|357127016|ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 32 NLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQ 91
NL +N+ S++ V L + T+E L+ FS G V EVK++ +T +SKGY F++
Sbjct: 18 NLLNRSANFSSCSKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRSKGYGFVK 77
Query: 92 YTSQDDALLALESMDHKNLDGRLIYVDIAKPG 123
++S+ +A ALE M ++ LDGR I V A G
Sbjct: 78 FSSESEAAAALEKMSNELLDGRNIRVHYANSG 109
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ + V L T+ L++EF+ FGEV ++V D ++ SKG+ F+QY + +DA +E
Sbjct: 49 TNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIE 108
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQD 146
MD K LDG +I+ + A+P PP QPL+
Sbjct: 109 GMDGKFLDGWVIFAEYARP------------RPPPGQPLNSNS 139
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V N+ F T E L+ F +GE+A ++++ D T +++G+AF++ T+ +DA A+ +
Sbjct: 4 VFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIAGL 63
Query: 106 DHKNLDGRLIYVDIAKP---------GKDRFGGYPRTSG 135
+ LDGR + V+ AKP G DR GGY R G
Sbjct: 64 NGTQLDGRALNVNEAKPKPQGGGARGGNDR-GGYSRDRG 101
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRFGGY 130
M+ K++DGR I VD A K +R GY
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGY 93
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++++ V+ L F++ E + + FS FGEV E K+V D+ K+ KGY F+ + +D A A
Sbjct: 32 FSAKVFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGFVTFAKKDAAEKA 91
Query: 102 LESMDHKNLDGRLIYV 117
E M+ K LDGR IYV
Sbjct: 92 CEGMNGKLLDGRAIYV 107
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 50 NLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKN 109
L + T E+TL+ FS+FG V EVK++ D T +S+G+ F+ +TS ++A +AL+ MD +
Sbjct: 52 GLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGRE 111
Query: 110 LDGRLIYVDIA--KPGKDRFGG 129
L GR I VD A K + R GG
Sbjct: 112 LAGRQIRVDYATDKARETRGGG 133
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
Length = 153
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FGEV E +VKD T +S+G+ F++Y ++DDA A+
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAIT 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRQIRVDKA 78
>gi|255577432|ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
gi|223530928|gb|EEF32787.1| RNA binding motif protein, putative [Ricinus communis]
Length = 217
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
N++NP ++ N L+ P S + V NL ++ L FS FG++A V ++KD+ +
Sbjct: 32 NQKNPKSKS-NGSGGLA--PSKSTVYVSNLDYSLTNSDLHTLFSTFGKIARVTVLKDKQS 88
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
++SKG AFIQ+ S+DDA+ A + MD K L+GR + IA
Sbjct: 89 RQSKGVAFIQFVSRDDAVSAAKQMDKKILNGRTLSASIA 127
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 54/79 (68%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V + + T +H+L+ EF+ +G+V E +++ D + +S+G+ F+ YTS ++A A
Sbjct: 28 MSSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAA 87
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ ++D K LDGR I V+ A
Sbjct: 88 ITALDGKTLDGRSIRVNHA 106
>gi|5803137|ref|NP_006734.1| putative RNA-binding protein 3 [Homo sapiens]
gi|383872909|ref|NP_001244635.1| RNA binding motif (RNP1, RRM) protein 3 [Macaca mulatta]
gi|332860686|ref|XP_521047.2| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
troglodytes]
gi|332860688|ref|XP_003317502.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
troglodytes]
gi|397471359|ref|XP_003807263.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan paniscus]
gi|397471361|ref|XP_003807264.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan paniscus]
gi|402910082|ref|XP_003917720.1| PREDICTED: putative RNA-binding protein 3 [Papio anubis]
gi|426395802|ref|XP_004064149.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Gorilla
gorilla gorilla]
gi|426395804|ref|XP_004064150.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Gorilla
gorilla gorilla]
gi|1710620|sp|P98179.1|RBM3_HUMAN RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3; AltName: Full=RNPL
gi|881954|gb|AAB17212.1| RNPL [Homo sapiens]
gi|13905080|gb|AAH06825.1| RNA binding motif (RNP1, RRM) protein 3 [Homo sapiens]
gi|119571152|gb|EAW50767.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|119571153|gb|EAW50768.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|380815298|gb|AFE79523.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815300|gb|AFE79524.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815302|gb|AFE79525.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420491|gb|AFH33459.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420493|gb|AFH33460.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948600|gb|AFI37905.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948602|gb|AFI37906.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|410228038|gb|JAA11238.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L F T E TL+ FS FG V E +++ D + +S+G+ FI +TS ++A A+
Sbjct: 31 SSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAM 90
Query: 103 ESMDHKNLDGRLIYVDIAK 121
SMD K L GR I V+ A
Sbjct: 91 TSMDGKELQGRNIRVNHAN 109
>gi|116782406|gb|ABK22494.1| unknown [Picea sitchensis]
Length = 178
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 60/92 (65%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L + T E +L+ FS+FG + E +V D +TK+S+G+AF++Y +++A A++ M
Sbjct: 84 LYVSGLSYYTTEQSLRNAFSSFGNLVEATIVMDRVTKRSRGFAFLRYAYEEEAEAAIKGM 143
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPP 137
K LDGR+I+V+ +K + G P++ GPP
Sbjct: 144 HGKFLDGRVIFVEYSKLPSELRGAPPKSPGPP 175
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
L ++ V L F T+E L+ FS +GE+ EV+++ + + SKG+ F+Q+ S+ DA+ A
Sbjct: 33 LNKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNA 92
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGP-PKQQPLS 143
L+ MD ++LDGR I V+ A + P+ P P PL+
Sbjct: 93 LKEMDGQSLDGRNIRVNFANTRARQDSAPPKAVVPDPGLNPLT 135
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L + T E +L+ F+ +G+V E K++ D T +S+G+ FI Y S ++A A+
Sbjct: 30 SSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAI 89
Query: 103 ESMDHKNLDGRLIYVDIA 120
++D K+LDGR I V+ A
Sbjct: 90 TALDGKDLDGRNIRVNTA 107
>gi|355757333|gb|EHH60858.1| RNA-binding motif protein 3 [Macaca fascicularis]
Length = 157
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A+ +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|332255488|ref|XP_003276864.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Nomascus
leucogenys]
Length = 157
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A+ +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L F T E TL+ FS FG V E +++ D + +S+G+ FI +TS ++A A+
Sbjct: 31 SSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAM 90
Query: 103 ESMDHKNLDGRLIYVDIAK 121
SMD K L GR I V+ A
Sbjct: 91 TSMDGKELQGRNIRVNHAN 109
>gi|410255528|gb|JAA15731.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|452936|gb|AAB28794.1| 60 kda non-pathogenic specific antigen [Entamoeba histolytica, SAW
1734R, Peptide Partial, 273 aa]
Length = 273
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI + NLPF E +KEF FG +AE+ L D+ITKKSKG+ + + DA+ A
Sbjct: 182 RIYITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDAVKACNE 241
Query: 105 MDHKNLDGRLIYVDIAK 121
MD+K + GR+++V AK
Sbjct: 242 MDNKFIKGRIVHVTYAK 258
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 48 VRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDH 107
++NLP E L+++F FG + + K+++ S+ + FI + ++D A A+ M+
Sbjct: 1 IKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGVSRKFGFIGFENEDQAQTAITKMNG 59
Query: 108 KNLDGRLIYVDIAK 121
+ + V +AK
Sbjct: 60 AYIQSSKLQVSLAK 73
>gi|296235404|ref|XP_002762884.1| PREDICTED: putative RNA-binding protein 3 [Callithrix jacchus]
Length = 159
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
R+ VRNLP++ E L + F G+++EV +V D+ T+KSKG+A IQY DA+ A E
Sbjct: 327 GRLFVRNLPYSATEADLAEAFGQHGQLSEVHIVVDKATRKSKGFALIQYEEVADAITAKE 386
Query: 104 SMDHKNLDGRLIYV 117
+D GRL++V
Sbjct: 387 ELDESIFQGRLLHV 400
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++VRN+ F + F+ FG++ +L K + +G+AF+ + ++ +A A
Sbjct: 759 GTKLVVRNVAFEATRKDVAALFAPFGQIKSCRLPK-KFDGSHRGFAFVDFLTKQEAKSAA 817
Query: 103 ESMDHKNLDGRLIYVDIAK 121
E++ +L GR + V+ A+
Sbjct: 818 EAVAGTHLYGRRLVVEWAE 836
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK--------SKGYAFIQYTSQDD 97
I V+NL F T + TL+ F A A + + K+ S G+ FI+ +S+D
Sbjct: 650 IYVKNLAFATTDATLRAHFDAVVSAAGGSIRAASVAKRKGPDGKPLSSGFGFIECSSEDV 709
Query: 98 ALLALESMDHKNLDGRLIYVDIA 120
A +A++ LDG + + ++
Sbjct: 710 AKIAIKKQQGSILDGHKLALQLS 732
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ SRI V+ LP + L++ FS G++ + K+++ E S+ + F+ + S +A A
Sbjct: 1 MTSRICVKGLPKQCSDQQLREHFSEKGDITDAKIMRTE-DGHSRQFGFVGFRSVAEAQAA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPR-----TSGPPKQQPLSEQDE 147
++ + + + + V+ A+ K R PR T G + Q L + +E
Sbjct: 60 VKYFNRSFMGAQRLTVEFAE--KFRGSHLPRAWSKYTEGSSRYQKLHQDEE 108
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 54/80 (67%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V + + T +H+L+ EF+ +G+V E +++ D + +S+G+ F+ YTS ++A A
Sbjct: 28 MSSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAA 87
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+ ++D K LDGR I V+ A
Sbjct: 88 ITALDGKTLDGRSIRVNHAN 107
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V L F T E + FS FG V E +L++D T + KG+ F++Y+SQ +A A
Sbjct: 19 FSTEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKA 78
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+++MD K L GRLI+V++AK
Sbjct: 79 VKAMDGKILRGRLIFVEMAK 98
>gi|389632187|ref|XP_003713746.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
gi|351646079|gb|EHA53939.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
Length = 236
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ S++ + L + T E TL+++F +G V E +VKD T +S+G+ F++YT++DDA A
Sbjct: 55 IMSKLFIGGLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKA 114
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ +M++ DGR I VD A
Sbjct: 115 ITAMNNVEFDGRTIRVDKA 133
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E +L + F+ +G +A+V +++D+ T +S+G+ F++Y + +DA ALE
Sbjct: 5 GKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALE 64
Query: 104 SMDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 65 GMNGKSVDGRTIRVDEA 81
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
R+ VRNLP++ E LQ F +G+V+EV LV D +KKSKG+A +Q+ DA+ A
Sbjct: 18 GRLFVRNLPYSATEAELQALFEGYGDVSEVHLVLDRASKKSKGFALVQFADPQDAVKAHA 77
Query: 104 SMDHKNLDGRLIYVDIAKPGK 124
+D GRLI++ PGK
Sbjct: 78 ELDASIFQGRLIHI---LPGK 95
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P +++VRN+ F + F+ FG V +L + + +G+AF+ + ++ +A
Sbjct: 465 PDTCKVVVRNVAFEATRKDIMGLFTPFGHVNSCRLPR-KFDGTHRGFAFVDFATKQEARN 523
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+E++ +L GR + ++ A+
Sbjct: 524 AMEAVQGAHLYGRRLVLEWAE 544
>gi|298707500|emb|CBJ30102.1| Uncharacterized protein [Ectocarpus siliculosus]
Length = 470
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 33 LRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQY 92
+ + + P+ +I VR LP+ T++ +L+ F +GE+AE +V D++T+KSKGY F+ +
Sbjct: 152 IHRACDDIPVNKKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTF 211
Query: 93 TSQDDALLALESMDHKNLDGRLIYVDIA 120
S D A ALE+ + K +DGR+ ++A
Sbjct: 212 KSMDGAHAALENPE-KMIDGRVSLCNLA 238
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
A +I VR L + T +L+ FS FGE+ + + D + KSKGY F+ + +A A+
Sbjct: 280 ARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTFRFAANAAAAV 339
Query: 103 ESMDHKNLDGRLIYVDIAKPG 123
+ K LDGRL + +IA G
Sbjct: 340 AEPE-KQLDGRLTHCNIAAEG 359
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 54/79 (68%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V + + T +H+L+ EF+ +G+V E +++ D + +S+G+ F+ YTS ++A A
Sbjct: 28 MSSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAA 87
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ ++D K LDGR I V+ A
Sbjct: 88 ITALDGKTLDGRSIRVNHA 106
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R + NL ++T + +L+ F FG V E K+V D+ + +S+G+AF+ + + D A+E
Sbjct: 8 RCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 105 MDHKNLDGRLIYVDIAKP---GKDRFG 128
M+ +LDGR I VD A+P G+DR G
Sbjct: 68 MNGLDLDGRAITVDKAQPQGAGRDRNG 94
>gi|735966|emb|CAA56649.1| surface antigen [Entamoeba histolytica]
Length = 294
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI + NLPF E +KEF FG +AE+ L D+ITKKSKG+ + + DA+ A
Sbjct: 187 RIYITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDAVKACNE 246
Query: 105 MDHKNLDGRLIYVDIAK 121
MD+K + GR+++V AK
Sbjct: 247 MDNKFIKGRIVHVTYAK 263
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SRI+++NLP E L+++F FG + + K+++ S+ + FI + ++D A A+
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTP-QGVSRKFGFIGFENEDQAQTAIT 60
Query: 104 SMDHKNLDGRLIYVDIAK 121
M+ + + V +AK
Sbjct: 61 KMNGAYIQSSKLQVSLAK 78
>gi|90075670|dbj|BAE87515.1| unnamed protein product [Macaca fascicularis]
Length = 135
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + L + T E+TL+ F +FG V +VK++ D T +S+G+ F+ +TS +A +AL
Sbjct: 44 SSKLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVAL 103
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
+ MD + L GR I VD A D
Sbjct: 104 QEMDGRELAGRQIRVDYATDKSD 126
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 51/78 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + + + T + +L++ F+ +GEV E +++ D T +S+G+ F+ YTS D+A A+
Sbjct: 30 SSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAI 89
Query: 103 ESMDHKNLDGRLIYVDIA 120
MD K+L GR++ V A
Sbjct: 90 TGMDGKDLQGRIVRVSYA 107
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
R +P F F S+S+ P ++++ + + ++T E +L++ FS +GEV + +++ D T
Sbjct: 24 RSSPSF--FQAIRSMSSAP-STKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETG 80
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAK 121
+S+G+ FI YTS ++A A++++D ++L GR I V+ A
Sbjct: 81 RSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYAN 119
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L + T E +L+ F+ +G+V E K++ D T +S+G+ FI Y S ++A A+
Sbjct: 30 SSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAI 89
Query: 103 ESMDHKNLDGRLIYVDIA 120
++D K+LDGR I V+ A
Sbjct: 90 TALDGKDLDGRNIRVNTA 107
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S+I V NLP++ + TL+ FS FG V K++ D T +SKG+ F++ S + A A
Sbjct: 1 MSSKIYVGNLPYSVTDSTLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ + ++DGR I V++A+P ++R
Sbjct: 61 ITGLHGMSVDGRSIVVNLARPREER 85
>gi|224000233|ref|XP_002289789.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
gi|220974997|gb|EED93326.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
Length = 886
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
LA R+ VRNLPFTT E L + FS FG VA V + D+ TK++KGYAFI Y S+ DA LA
Sbjct: 329 LADRLFVRNLPFTTTEEELFETFSQFGSVAAVHIPVDD-TKRNKGYAFISYQSKHDAKLA 387
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+++MD ++ GRLI++ A+P
Sbjct: 388 IDTMDGEDFQGRLIHILPARP 408
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++IM+RN+PF + + F FG++ +V+L K + +G+ F ++ ++ +A A+
Sbjct: 764 TKIMIRNIPFEATRSEILQLFGTFGQLKKVRLPK-KFDGTHRGFGFCEFLTRKEAQNAMA 822
Query: 104 SMDHKNLDGRLIYVDIA 120
++ +L GR + ++ A
Sbjct: 823 TLSRTHLYGRHLVLEWA 839
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 28/93 (30%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEV---------------------AEVKLVKDEITKKS 84
I V+NL F T E L+++F++ G V +E KLV S
Sbjct: 655 IYVKNLNFNTSEDELKRQFTSVGFVPRAVKIPTKAAPMKKQSPADDSETKLV-------S 707
Query: 85 KGYAFIQYTSQDDALLALESMDHKNLDGRLIYV 117
GY F+++ S+++A A++S+ K +DG + +
Sbjct: 708 MGYGFVEFVSEEEAKKAMKSLQGKLVDGHSLDI 740
>gi|254580049|ref|XP_002496010.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
gi|238938901|emb|CAR27077.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
Length = 304
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V LP+ T E LQ+EFS FG++ +++V+D++T KSKGYAF+ +T+ + +A + +
Sbjct: 109 IFVGRLPYDTTEMELQREFSKFGDIERIRVVRDKVTNKSKGYAFVLFTNPQSSRMACKEI 168
Query: 106 D-HKNLD--GRLIYVDIAK 121
H+ L+ GR+ VDI +
Sbjct: 169 GIHRGLEIKGRIAIVDIER 187
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL + E L++ F FG+V+ ++ D+ T +SKG+ F++ +S DDA A+ES+
Sbjct: 3 IYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIESL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ +L+GR I V+ AKP +R
Sbjct: 63 NDTDLNGRTIKVNEAKPRAER 83
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
A + V +L + E L+ EF FGE+A V++V D + +SKG+ +++YT+ + A AL
Sbjct: 301 AKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKKAL 360
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
E M K++DGR I VD + P
Sbjct: 361 EEMKGKDIDGRTINVDFSAP 380
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P + + V NL F E +Q EF FG + +++ D + + KG+ +IQY D A
Sbjct: 399 PESETVFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARK 458
Query: 101 ALESMDHKNLDGRLIYVDIAKP 122
A+E M+ + GR I D + P
Sbjct: 459 AVEEMNGALVAGRAIRTDFSTP 480
>gi|186512055|ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
Length = 816
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP+T E L + FS FG+++EV LV D+ TK+S+G A+I Y + A A+E
Sbjct: 295 RLFVRNLPYTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYLIPECAARAMEE 354
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPK--QQPLSEQDEVADC 151
+D+ + GRL+++ AK + TS PK +Q EQ + ++
Sbjct: 355 LDNSSFQGRLLHILPAKHRETSDKQVNDTSNLPKTFKQKREEQRKASEA 403
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SRI V+NLP E L+ FS GE+ + KL++ KS+ + FI + S +A A++
Sbjct: 2 SRICVKNLPKHVKEDQLRDHFSQKGEITDAKLMRSN-DGKSRQFGFIGFRSAQEAQQAIK 60
Query: 104 SMDHKNLDGRLIYVDIA 120
++ L LI V+IA
Sbjct: 61 YFNNTYLGTSLIIVEIA 77
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Query: 21 TNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI 80
+N++ PC +++ V+N+ F + L++ FS FG++ ++L K I
Sbjct: 695 SNKDKPC----------------TKLHVKNIAFEATKRELRQLFSPFGQIKSMRLPKKNI 738
Query: 81 TKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
+ + GYAF+++ ++ +AL A +++ + GR + ++ A
Sbjct: 739 GQYA-GYAFVEFVTKQEALNAKKALASTHFYGRHLVLEWA 777
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 24 ENPCFRTFNLRASLSNYPLASR---IMVRNLPFTTHEHTLQKEFSAF---GEVAEVKLVK 77
E R NL + P + + V+NL F T + L+K F+ G++ V ++K
Sbjct: 579 EENGVRRVNLEQQVEIDPDVTESNVLNVKNLSFKTTDEGLKKHFTKLVKQGKILSVTIIK 638
Query: 78 DEITKK--SKGYAFIQYTSQDDALLALESMDHKNLDGRLIYV 117
+ +K S GY F+++ S + A + LDG + +
Sbjct: 639 HKKNEKYLSSGYGFVEFDSVETATSVYRDLQGTVLDGHALIL 680
>gi|348553582|ref|XP_003462605.1| PREDICTED: putative RNA-binding protein 3-like [Cavia porcellus]
Length = 159
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F+T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFSTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
R P + LS+ + ++ V L T + L++ FS+FG++ E K++ D +
Sbjct: 12 RRTPLVHSHYASIRLSSTLTSPKLFVSGLCRLTIDEKLKEAFSSFGQLVEAKVIIDRASG 71
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDR 126
+SKG+AF+ YT+ ++A A E M+ K LDG +I+VD AKP + R
Sbjct: 72 RSKGFAFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPR 115
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|383763833|ref|YP_005442815.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384101|dbj|BAM00918.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 105
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + T E L++ F A+G V+ +++D + +SKG+ F++ S +AL A+ ++
Sbjct: 3 IYVGNLSYRTTEDELRRTFEAYGAVSSASIIRDRESGQSKGFGFVEMPSDSEALAAINAL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDEVADCW 152
+ K + GR + V+ A+P R PR G P+ +P S+Q+ + W
Sbjct: 63 NDKEVGGRRLKVNQARP---REESGPR-GGRPQSRPRSDQNRDRNRW 105
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2; Short=xCIRP2;
AltName: Full=Glycine-rich RNA-binding protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E +L++ FS +G+++EV +VKD TK+S+G+ F+ + + DDA A+
Sbjct: 5 GKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMM 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K +DGR I VD A
Sbjct: 65 AMNGKAVDGRQIRVDQA 81
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
D LDGR + V +A+ G+ Y R S PP++
Sbjct: 76 DGALLDGRELRVQMARYGRPPDSMYSRRSAPPRR 109
>gi|327279530|ref|XP_003224509.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 148
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E L++ FS +G++AEV +VKD T++S+G+ FI Y +DA A+
Sbjct: 6 GKLFIGGLSFDTNEQNLEQLFSPYGDIAEVVVVKDRETQRSRGFGFITYCRPEDAKDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ +++DGR I VD A
Sbjct: 66 AMNGESVDGRQIRVDQA 82
>gi|119496815|ref|XP_001265181.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
gi|119413343|gb|EAW23284.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
Length = 825
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A++ + L+SR+ VRNLP+ E L+ FS FG+V E+ + D + SKG+A++QY
Sbjct: 292 ANIEHIRLSSRLFVRNLPYDASESDLEPVFSKFGKVEEIHVAFDTRSTTSKGFAYVQYIE 351
Query: 95 QDDALLALESMDHKNLDGRLIYV 117
D A+ A + +D K+ GRL+++
Sbjct: 352 PDAAVQAYKELDGKHFQGRLMHI 374
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 760
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 761 ALKNTHLLGRRLVLEFA 777
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP+T E L++ FS FG V++V LV ++ TK+SKG A++ +T + A+ ALE
Sbjct: 446 RLFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEE 505
Query: 105 MDHKNLDGRLIYVDIAKPGK 124
+D+ GRL++V A+ K
Sbjct: 506 LDNSIFQGRLLHVMPAREKK 525
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++++VRN+ F E L++ FS FG++ ++L +G+AF+++ ++ +A AL
Sbjct: 861 STKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMK--FGSHRGFAFVEFVTKQEAQNAL 918
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
+++ +L GR + ++ AK G+
Sbjct: 919 QALSSTHLYGRHLVMERAKEGE 940
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
SRI V+NLP E L+ FS GE+ + KL++ + KS+ +AFI + ++ +A AL
Sbjct: 118 GSRICVKNLPKYVAEDRLRDHFSQKGEITDAKLMRTK-EGKSRQFAFIGFRTEQEAEEAL 176
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
+ ++ LD I +IA+ D
Sbjct: 177 KFFNNSYLDTCRITCEIARKVGD 199
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK-DEITKKSK----GYAFIQYTSQDDALL 100
+ V+NL F T +L+K FS + +++ V+ E K K G+ FI++ S + A+
Sbjct: 764 LFVKNLNFKTSGESLRKHFSEHMKEGKIRSVRVKEHLKNGKNVSMGFGFIEFDSVETAVN 823
Query: 101 ALESMDHKNLDGRLIYVDIAKPGKD 125
++ LDG + + + + KD
Sbjct: 824 VCSNLQGTVLDGHALILQLCRAKKD 848
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP+T E L++ FS FG V++V LV ++ TK+SKG A++ +T + A+ ALE
Sbjct: 230 RLFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEE 289
Query: 105 MDHKNLDGRLIYVDIAKPGK 124
+D+ GRL++V A+ K
Sbjct: 290 LDNSIFQGRLLHVMPAREKK 309
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++++VRN+ F E L++ FS FG++ ++L +G+AF+++ ++ +A AL
Sbjct: 645 STKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMK--FGSHRGFAFVEFVTKQEAQNAL 702
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
+++ +L GR + ++ AK G+
Sbjct: 703 QALSSTHLYGRHLVMERAKEGE 724
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK-DEITKKSK----GYAFIQYTSQDDALL 100
+ V+NL F T +L+K FS + +++ V+ E K K G+ FI++ S + A+
Sbjct: 548 LFVKNLNFKTSGESLRKHFSEHMKEGKIRSVRVKEHLKNGKNVSMGFGFIEFDSVETAVN 607
Query: 101 ALESMDHKNLDGRLIYVDIAKPGKD 125
++ LDG + + + + KD
Sbjct: 608 VCSNLQGTVLDGHALILQLCRAKKD 632
>gi|9293999|dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]
Length = 396
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAF++YT+++ A AL+
Sbjct: 283 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKE 342
Query: 105 MDHK-NLDGR 113
M+ K NLD R
Sbjct: 343 MNGKVNLDFR 352
>gi|340992759|gb|EGS23314.1| hypothetical protein CTHT_0009820 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 191
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + TL+K+F FG V E +VKD T +S+G+ F++YT++ DA A++
Sbjct: 2 SKLFIGGLAWHTEDATLKKKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEADAQKAMD 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRQIRVDKA 78
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 53/76 (69%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E +L++ FS +G+VAEV +VKD +K+S+G+ F+ + + +DA A+ +
Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L++ F +G+++EV +VKD T++S+G+ F+ + + +DA A+E+
Sbjct: 8 KLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEA 67
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 68 MNGKSVDGRQIRVDQA 83
>gi|417396785|gb|JAA45426.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 190
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 53/81 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ +I V NLP++ + +L+ F+ FG V K++ D T +SKG+ F++ +S +DA A
Sbjct: 1 MSCKIYVGNLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ ++ ++DGR I V++A+P
Sbjct: 61 ITGLNGLSVDGRSIVVNLARP 81
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 63 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 122
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 123 AMNGESLDGRQIRVDHA 139
>gi|223940412|ref|ZP_03632265.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223890907|gb|EEF57415.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 118
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+++ V NLPF+T E+ LQ FS G V V +++D T +S+G+AFI+ SQ +A A
Sbjct: 1 MATKLFVGNLPFSTTENDLQDHFSGAGTVIAVNIMQDRATGRSRGFAFIEMGSQAEADAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ K GR + V+ A+P ++R
Sbjct: 61 VAQYHGKEFQGRALTVNEARPREER 85
>gi|444518692|gb|ELV12325.1| Putative RNA-binding protein 3 [Tupaia chinensis]
Length = 154
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|426257071|ref|XP_004022158.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Ovis aries]
gi|426257073|ref|XP_004022159.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Ovis aries]
gi|426257075|ref|XP_004022160.1| PREDICTED: putative RNA-binding protein 3 isoform 3 [Ovis aries]
gi|426257077|ref|XP_004022161.1| PREDICTED: putative RNA-binding protein 3 isoform 4 [Ovis aries]
gi|426257079|ref|XP_004022162.1| PREDICTED: putative RNA-binding protein 3 isoform 5 [Ovis aries]
Length = 160
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|374373120|ref|ZP_09630780.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373234093|gb|EHP53886.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 88
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 48 VRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDH 107
V NL F + L++ FS+FG+V+ K++ D T KS+G+ F++ S DA LA++ +D
Sbjct: 5 VSNLGFHASDDDLRELFSSFGQVSSAKVIMDRTTGKSRGFGFVEMGSVSDATLAMKELDG 64
Query: 108 KNLDGRLIYVDIAKPGKDR 126
K++DGR I V AK ++R
Sbjct: 65 KDVDGRRIAVSAAKEREER 83
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 55/79 (69%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V L + T++ +L++ F++FG+V E +++ D + +S+G+ F+ + + DDA A
Sbjct: 35 MSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSA 94
Query: 102 LESMDHKNLDGRLIYVDIA 120
+++MD K L+GR I V+ A
Sbjct: 95 MDAMDGKELEGRSIRVNFA 113
>gi|392412614|ref|YP_006449221.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390625750|gb|AFM26957.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 95
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 55/81 (67%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ +I V NL F + E L+ FS +GEV K++ D+ T +S+G+ FI+ T++++ L A
Sbjct: 1 MSIKIYVGNLSFDSSEADLKGLFSTYGEVESAKVIVDQFTNRSRGFGFIEMTNREEGLKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
++++D K+L GR + V+ AKP
Sbjct: 61 IQALDSKDLAGRPLKVNEAKP 81
>gi|301764797|ref|XP_002917810.1| PREDICTED: putative RNA-binding protein 3-like isoform 1
[Ailuropoda melanoleuca]
Length = 156
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|350538645|ref|NP_001233728.1| RNA-binding motif 3 [Cricetulus griseus]
gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus]
Length = 156
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|189339246|ref|NP_446148.1| putative RNA-binding protein 3 [Rattus norvegicus]
gi|149028410|gb|EDL83795.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149028411|gb|EDL83796.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 156
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++I V NL + T + TL++ FS FG V + +++D T +S+G+ F+ Y+S +A A+
Sbjct: 3 SAKIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAI 62
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
++ ++LDGR I V+IA P
Sbjct: 63 SGLNDQDLDGRRIKVNIANP 82
>gi|310793386|gb|EFQ28847.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 171
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FG V E +VKD T +S+G+ F++YT DA A+
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAIS 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|281353659|gb|EFB29243.1| hypothetical protein PANDA_006181 [Ailuropoda melanoleuca]
Length = 148
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|384099683|ref|ZP_10000766.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
gi|383832219|gb|EID71694.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
Length = 92
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL F T E L F+ FGEV+ VK++ D + +S+G+AF++ + AL A+E +
Sbjct: 3 IFVGNLSFQTSEEQLLDVFTPFGEVSSVKVIVDGYSNRSRGFAFVEMPVSEHALTAIERL 62
Query: 106 DHKNLDGRLIYVDIAKPGK--DRF 127
+ LD R+I V+ AKP + DRF
Sbjct: 63 NESMLDSRVIVVNEAKPKRSNDRF 86
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ + V L T L++ FS FGEV + ++V D ++ SKG+ F++Y S +DA +E
Sbjct: 52 TNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGIE 111
Query: 104 SMDHKNLDGRLIYVDIAKP 122
MD K LDG +I+ + A+P
Sbjct: 112 GMDGKFLDGWVIFAEYARP 130
>gi|410988519|ref|XP_004000531.1| PREDICTED: putative RNA-binding protein 3 [Felis catus]
Length = 160
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|198436643|ref|XP_002128347.1| PREDICTED: similar to homology with RNA-binding proteins in
meristematic tissue [Ciona intestinalis]
Length = 202
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 7/101 (6%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ +I V ++ F E +++ FS GE+ + L+KD+ T+KS+G+ FI + ++ LA
Sbjct: 7 ISHKIFVGSIDFKATEKDVEEAFSHIGEIEHIVLLKDKETQKSRGFGFITFKDKNSVELA 66
Query: 102 LESMDHKNLDGRLIYVDIAK-------PGKDRFGGYPRTSG 135
+ SM+HK + GR I V+ A+ P +D+FGG + +G
Sbjct: 67 ISSMNHKIIMGRPIVVNYAEKKSGNSAPMQDKFGGQQQNAG 107
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V L + T + +L++ F++FGEV E ++ D T +S+G+ F+ ++ +D A A
Sbjct: 33 MSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNA 92
Query: 102 LESMDHKNLDGRLIYVDIA 120
++ MD K L+GR I V++A
Sbjct: 93 IKEMDGKELNGRQIRVNLA 111
>gi|342889186|gb|EGU88353.1| hypothetical protein FOXB_01152 [Fusarium oxysporum Fo5176]
Length = 170
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FG V E +VKD T +S+G+ F++YT + DA A+
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIA 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 TMNNVEFDGRTIRVDKA 78
>gi|149744489|ref|XP_001493789.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Equus
caballus]
Length = 156
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|13785947|gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus]
Length = 127
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|72062514|ref|XP_796219.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Strongylocentrotus purpuratus]
Length = 233
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPFT + LQ+ F FG+VA V +VKD+ T+KSKG AF+ + +D A
Sbjct: 7 PSKSTVYVSNLPFTLTNNDLQQIFGRFGQVARVTIVKDKETRKSKGLAFVLFVERDSAYK 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
+++S++ + L GR V IA
Sbjct: 67 SIKSLNGRELFGRKWKVSIA 86
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
S++ V L + T + +++ FSAFGEV EVK++ D T +S+G+ F+ + + DA AL
Sbjct: 41 GSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAAL 100
Query: 103 ESMDHKNLDGRLIYVDIA 120
+++D ++L GR I V+ A
Sbjct: 101 QALDGRDLAGRTIRVNYA 118
>gi|407262829|ref|XP_003945671.1| PREDICTED: putative RNA-binding protein 3-like [Mus musculus]
Length = 154
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|345569077|gb|EGX51946.1| hypothetical protein AOL_s00043g680 [Arthrobotrys oligospora ATCC
24927]
Length = 150
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ V L + T + TL+ +F FG+V E +VKD T +S+G+ F+++T++ DA A+
Sbjct: 2 SKLFVGGLAWHTDDQTLRTKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTNEADATTAMN 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNTEFDGRYIRVDKA 78
>gi|395854422|ref|XP_003799690.1| PREDICTED: putative RNA-binding protein 3 [Otolemur garnettii]
Length = 155
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSTFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDRA 82
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
R +P F F S+S+ P ++++ + + ++T E +L++ FS +GEV + +++ D T
Sbjct: 24 RSSPSF--FQAIRSMSSAP-STKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETG 80
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
+S+G+ FI YTS ++A A++++D ++L GR I V+ A
Sbjct: 81 RSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYA 118
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FG V E +VKD T +S+G+ F++YT ++DA A+
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQENDAQNAIA 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|343432668|ref|NP_001230348.1| RNA binding motif (RNP1, RRM) protein 3 [Sus scrofa]
Length = 156
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+ +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
S++ V L + T + +++ FSAFGEV EVK++ D T +S+G+ F+ + + DA AL
Sbjct: 41 GSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAAL 100
Query: 103 ESMDHKNLDGRLIYVDIA 120
+++D ++L GR I V+ A
Sbjct: 101 QALDGRDLAGRTIRVNYA 118
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H LQ FS FGE+ + K+++D T +S+G+ F+ + +++ A+E
Sbjct: 5 RCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAIEG 64
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 65 MNGKELDGRSITVNQAQS 82
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NL F+ + L FS FG++ +V +VKD+ T++SKG AFI Y S+DDA
Sbjct: 16 PSKSTVYVSNLDFSLTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFILYASRDDAHA 75
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+++M+ K L+ R + V IA+
Sbjct: 76 AVKTMNGKILNKRTLKVSIAE 96
>gi|392409536|ref|YP_006446143.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390622672|gb|AFM23879.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 103
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL F +E L++ F FG V K++ D+ T +S+G+ F++ ++++D L A+E++
Sbjct: 5 IYVGNLSFNANEGELRELFEQFGSVDSAKIITDQFTGRSRGFGFVEMSNREDGLRAIENL 64
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D K+ GR + V+ A+P K
Sbjct: 65 DSKDFSGRSLKVNEARPKK 83
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E L++ F+ +G ++EV +VKD TK+S+G+ F+ + + DDA A+
Sbjct: 5 GKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMM 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR I VD A
Sbjct: 65 AMNGKSVDGRQIRVDQA 81
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%)
Query: 25 NPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS 84
P RT + + R+ VRNLPFT+ E L+K FS +G ++E+ D++TKK
Sbjct: 384 QPWQRTLRDDEEEEDLSESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKP 443
Query: 85 KGYAFIQYTSQDDALLALESMDHKNLDGRLIYV 117
KG+AFI Y + A+ AL +D + GR++++
Sbjct: 444 KGFAFITYMIPEHAVKALAELDGQVFQGRMMHL 476
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 818 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAKKAF 877
Query: 103 ESMDHK-NLDGRLIYVDIA 120
+++ H +L GR + ++ A
Sbjct: 878 QALCHSTHLYGRRLVLEWA 896
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E +K F+AFG + + +K KD +K + FI Y S+D+A A
Sbjct: 2 SRLIVKNLPSGMKEERFRKLFAAFGTLTDCCLKYTKDGRFRK---FGFIGYKSEDEAQAA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D + V++ K
Sbjct: 59 LNHFNKSFIDTSRLTVELCK 78
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI---TKKSKGYAFIQYTSQDDALLAL 102
+ ++NL F T E TL++ FS G + + K + T S G+ F++Y + A AL
Sbjct: 718 LFIKNLNFATTEDTLKETFSKVGALKSCTISKKKDKAGTLLSMGFGFVEYKKPESAQKAL 777
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ +DG + V +++
Sbjct: 778 RQLQGCTVDGHKLEVKLSE 796
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L++ FS FGE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+ +
Sbjct: 32 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 91
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD A
Sbjct: 92 MNGESLDGRQIRVDHA 107
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 32 NLRASLSNYPL--------ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK 83
NL S SN L +S++ V L + T E +L++ FS +G+V E +++ D T +
Sbjct: 20 NLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGR 79
Query: 84 SKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
S+G+ FI + S ++A AL++MD ++L GR I V+ A
Sbjct: 80 SRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYA 116
>gi|171680237|ref|XP_001905064.1| hypothetical protein [Podospora anserina S mat+]
gi|170939745|emb|CAP64971.1| unnamed protein product [Podospora anserina S mat+]
Length = 176
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FG V E +VKD T +S+G+ F++YT+ DDA A+
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNPDDAQKAIS 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M + DGR I VD A
Sbjct: 62 AMKNIEFDGRQIRVDKA 78
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + TL++ FS FG + E +VKD T +S+G+ F+++ S+ +A A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 104 SMDHKNLDGRLIYVDIA--KPGKDRFGGYPRTS 134
M+++ DGR I VD A +P R G+ R++
Sbjct: 62 EMNNQEFDGRTIRVDKAADRPSGPRNDGFNRSN 94
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 54/85 (63%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+T + LQ+ FSAFG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
++ M+ ++L GR + V+ A+P + R
Sbjct: 61 IQGMNGQSLGGRSLVVNEARPMEPR 85
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+ + F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|417396333|gb|JAA45200.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 158
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|291407441|ref|XP_002719942.1| PREDICTED: RNA binding motif protein 3 [Oryctolagus cuniculus]
Length = 155
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFIGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 53/79 (67%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V L + T + +L++ F++FGEV E ++ D T +S+G+ F+ ++ +D A A
Sbjct: 33 MSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNA 92
Query: 102 LESMDHKNLDGRLIYVDIA 120
++ MD K L+GR I V++A
Sbjct: 93 IKEMDGKELNGRQIRVNLA 111
>gi|116206982|ref|XP_001229300.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
gi|88183381|gb|EAQ90849.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
Length = 179
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FG V E +VKD T +S+G+ F++YT++ DA+ A+E
Sbjct: 2 SKLFIGGLAWHTEEPTLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEGDAIKAIE 61
Query: 104 SMDHKNL---DGRLIYVDIA 120
+M++ +L DGR I VD A
Sbjct: 62 AMNNVDLPSFDGRQIRVDKA 81
>gi|194337130|ref|YP_002018924.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309607|gb|ACF44307.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 90
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL +T E L+ FS FG+V ++ D+ + +SKG+ F+ ++ +A A+ESM
Sbjct: 3 IYIGNLAYTVTEDDLRDAFSEFGQVESASIINDKFSGRSKGFGFVDMPNESEAREAIESM 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ K+L+GR I V+ AKP ++R
Sbjct: 63 NEKDLNGRTIKVNEAKPREER 83
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 52/80 (65%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E +L + F +G + +V +++D+ T +S+G+ F++Y S +DA A+
Sbjct: 5 GKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMT 64
Query: 104 SMDHKNLDGRLIYVDIAKPG 123
+M+ K+LDGR I VD A G
Sbjct: 65 AMNGKSLDGRAIRVDEAGKG 84
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F ++EH+L+ FS +G+V + +VKD T +S+G+ F+ + + DA AL +
Sbjct: 8 KLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEALHA 67
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD+A
Sbjct: 68 MNGESLDGRQIRVDLA 83
>gi|357112848|ref|XP_003558218.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 168
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 31 FNLRASLSNYP--LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYA 88
F A +SN P ++ V L T + L+ F FG+V E K++ D I+ +SKG+
Sbjct: 47 FGDDAEVSNVPPLTTPKLFVSGLSRLTTDEKLKNAFIPFGQVLEAKVITDRISGRSKGFG 106
Query: 89 FIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
F++Y S +A A + M+ K LDG +I+VD AKP
Sbjct: 107 FVRYVSLQEAEAARQGMNAKFLDGWVIFVDPAKP 140
>gi|37497112|ref|NP_058089.2| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|261862337|ref|NP_001159881.1| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|26340316|dbj|BAC33821.1| unnamed protein product [Mus musculus]
gi|26352956|dbj|BAC40108.1| unnamed protein product [Mus musculus]
gi|37589528|gb|AAH59098.1| Rbm3 protein [Mus musculus]
Length = 154
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+ +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E +L + F+ +G +A+V +++D+ T +S+G+ F++Y + +DA AL+
Sbjct: 5 GKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALD 64
Query: 104 SMDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 65 GMNGKSVDGRTIRVDEA 81
>gi|261862339|ref|NP_001159882.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|261862342|ref|NP_001159883.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|6093936|sp|O89086.1|RBM3_MOUSE RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
gi|3395381|dbj|BAA32060.1| rbm3 [Mus musculus]
gi|12834559|dbj|BAB22957.1| unnamed protein product [Mus musculus]
gi|12840849|dbj|BAB24981.1| unnamed protein product [Mus musculus]
gi|13879226|gb|AAH06580.1| Rbm3 protein [Mus musculus]
gi|15983757|gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
gi|74180334|dbj|BAE32335.1| unnamed protein product [Mus musculus]
gi|74198712|dbj|BAE39828.1| unnamed protein product [Mus musculus]
gi|74228699|dbj|BAE21846.1| unnamed protein product [Mus musculus]
gi|76780243|gb|AAI06177.1| Rbm3 protein [Mus musculus]
gi|148702004|gb|EDL33951.1| mCG116386, isoform CRA_a [Mus musculus]
gi|148702009|gb|EDL33956.1| mCG116386, isoform CRA_a [Mus musculus]
Length = 153
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+ +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|351706516|gb|EHB09435.1| Putative RNA-binding protein 3 [Heterocephalus glaber]
Length = 157
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+ +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP+T E L + F FGE++EV LV D+ TK+SK AF+ Y + A+ A+E
Sbjct: 331 RLFVRNLPYTATEEELAELFGKFGELSEVHLVLDKTTKRSKAMAFVLYMIPECAVRAMEQ 390
Query: 105 MDHKNLDGRLIYV 117
+D GRLI++
Sbjct: 391 LDKSIFQGRLIHI 403
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++I+VRN+ F LQ+ F+ FG++ ++L K + +G+AF+++ ++ +A A
Sbjct: 755 STKIIVRNVAFEATRKDLQQIFNPFGQIKSIRLPK-KFDGNHRGFAFVEFLTKKEAQNAF 813
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
E++ + +L GR + ++ AK G+
Sbjct: 814 EALQNTHLYGRHMVLERAKEGE 835
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDA 98
+SRI V+NLP E L++ F+A GEV + K+++ +++ + F+ Y ++++A
Sbjct: 6 SSRICVKNLPRHVTEERLREHFAAKGEVTDAKIIRTR-DGRTRQFGFVGYRTEEEA 60
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFS---AFGEVAEVKLVKDEITKKSK----GYAFIQYTSQ 95
A + V+NL F+T E +L+K F G V V + K + +K K G+ FI++ S
Sbjct: 646 ARSLFVKNLNFSTTEVSLKKHFDQKITQGSVRSVTIKKKQ-SKSGKPLSMGFGFIEFDSV 704
Query: 96 DDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
D A + +++ L+G + + ++ K G +TS
Sbjct: 705 DTAKMVCQNLQGTVLEGHALILQLSHNSKKACGSDSKTSA 744
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I+V+NLPF+T E L F FG +A V I +K A ++Y +A A + +
Sbjct: 528 ILVKNLPFSTTEDELVSMFGVFGSIARV------ILPPTKTLALVEYLEAAEARRAFKGL 581
Query: 106 DHKNLDGRLIYVDIA 120
+K +Y++ A
Sbjct: 582 AYKRFKHVPLYLEWA 596
>gi|338729124|ref|XP_003365829.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Equus
caballus]
Length = 135
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|431930897|ref|YP_007243943.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829200|gb|AGA90313.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 90
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NLP+ + L++ FS FGEV++V ++ D +T +SKG+ F++ +S A A++ +
Sbjct: 3 IYVGNLPYNVKDADLRETFSRFGEVSQVTVIMDRLTGESKGFGFVEMSSNSQADAAIKGL 62
Query: 106 DHKNLDGRLIYVDIAKPGKD 125
+ +L+GR I V+ AKP D
Sbjct: 63 NGTDLNGRNITVNQAKPKSD 82
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T+E +L+ FS +G+++EV ++KD T++S+G+ F+ + + D+A A+
Sbjct: 5 GKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAML 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K+LDGR I VD A
Sbjct: 65 AMNGKSLDGRQIRVDQA 81
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L F T E TL+ EF AFGEV V +VKD T K +GYAFI++ + D +A +
Sbjct: 102 LFVSRLSFDTTEKTLKHEFEAFGEVKSVSIVKDLKTGKPRGYAFIEFEHERDMKIAYKDA 161
Query: 106 DHKNLDGRLIYVDIAK 121
+ +DGR I VD+ +
Sbjct: 162 EGLKIDGRRILVDVER 177
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L++ FS FGE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+ + F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E L++ F+ +G ++EV +VKD TK+S+G+ F+ + + DDA A+
Sbjct: 5 GKLFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMM 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR I VD A
Sbjct: 65 AMNGKSVDGRQIRVDQA 81
>gi|386816934|ref|ZP_10104152.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
gi|386421510|gb|EIJ35345.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
Length = 127
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NLP+ E+ L+ F A+GEV+ V ++KD++T +SKG+ F+ + +A A+ +
Sbjct: 3 IYVGNLPYKITENELRDLFGAYGEVSSVSMIKDKMTGQSKGFGFVDMPNAGEATAAINGL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ + + GR I V+ AKP +DR
Sbjct: 63 NEQAVQGRNIKVNEAKPREDR 83
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E L++ F+ +G ++EV +VKD TK+S+G+ F+ + + DDA A+
Sbjct: 5 GKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMM 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR I VD A
Sbjct: 65 AMNGKSVDGRQIRVDQA 81
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + L ++T + +L+ FS FGEV E +++ D T +S+G+ F+ Y S + A AL
Sbjct: 35 SSKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEAL 94
Query: 103 ESMDHKNLDGRLIYVDIA------KPGKDRFGGYP 131
+MD + L GR I V A +P +GG P
Sbjct: 95 SAMDGQELGGRNIRVGYATDKRQPQPYNSNYGGNP 129
>gi|55778182|gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E +L F +G + +V +++D T+KS+G+ F++Y + +DA A++
Sbjct: 5 GKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMD 64
Query: 104 SMDHKNLDGRLIYVDIAKPG 123
M+ + LDGR I VD A G
Sbjct: 65 GMNGQTLDGRTIRVDEAGKG 84
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 8 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 67
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 68 TEDAMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 8 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 67
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 68 TEDAMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 8/100 (8%)
Query: 29 RTFNLRASLSNYPL--------ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI 80
+ NL S SN L +S++ V L + T E +L++ FS +GEV E +++ D
Sbjct: 17 KNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRE 76
Query: 81 TKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
T +S+G+ FI + S ++A A+++MD ++L GR I V+ A
Sbjct: 77 TGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYA 116
>gi|406952399|gb|EKD82023.1| hypothetical protein ACD_39C01519G0004 [uncultured bacterium]
Length = 83
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S+I V NLPF+ L++EF+ FG+V K++ D + +S+GY F+++T A A
Sbjct: 1 MSSKIFVGNLPFSVDNRKLEEEFAKFGQVVSAKVIMDRNSGRSRGYGFVEFTDPGSAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAK 121
++ M+ + ++GR + V +AK
Sbjct: 61 VDGMNDQPIEGRKLTVSLAK 80
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 7 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 66
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 67 TEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 7 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 66
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 67 TEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + TL+++F FG+V E +VKD T +S+G+ F+++T + DA A++
Sbjct: 2 SKLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQ 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NLP+T E L+ FS FG+V ++ D+ + +SKG+ F++ + D A A+E+M
Sbjct: 3 IYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAM 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+K+ GR I V+ AKP ++R
Sbjct: 63 HNKDFMGRSIMVNEAKPREER 83
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T++S+ + F+ + + DDA A+ +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIAKPGKD 125
M+ K++DGR I VD A D
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSD 87
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 3 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 62
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 63 TEDAMRSAIEGMNGKELDGRNITVNEAQS 91
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T+E +L+ FS +G+++EV ++KD T++S+G+ F+ + + D+A A+
Sbjct: 5 GKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAML 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K+LDGR I VD A
Sbjct: 65 AMNGKSLDGRQIRVDQA 81
>gi|387914322|gb|AFK10770.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392876160|gb|AFM86912.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 133
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 54/78 (69%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F+T E +L++ FS +G+++EV+++KD T+ S+G+ FI + + DA AL +
Sbjct: 6 KLFVGGLSFSTDEQSLEEVFSEYGQISEVRVIKDRDTQLSRGFGFITFENPGDAKDALLA 65
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K++DGR I VD A+
Sbjct: 66 MNGKSIDGRQIRVDQAEK 83
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++++D A+E
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 51/79 (64%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ + L + + L++ FS+FGEV E +++ D T +S+G+ F+ Y+ D A A
Sbjct: 35 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 94
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ +MD K +DGR + V++A
Sbjct: 95 ISAMDGKEIDGRQVRVNMA 113
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 2 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 61
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 62 TEDAMRSAIEGMNGKELDGRNITVNEAQS 90
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 7 REKMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 66
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 67 TEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V + F T E TL++ F+ +G+V+EV ++++ T++SKG+ F+ + + DDA AL
Sbjct: 6 KLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDALAG 65
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K +DGR I VD A
Sbjct: 66 MNGKTVDGRQIRVDHA 81
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS +G++ EV +VKD TK+S+G+ F+ + + +DA A+
Sbjct: 6 GKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMA 65
Query: 104 SMDHKNLDGRLIYVDIA 120
M+ K +DGR I VD A
Sbjct: 66 GMNGKTVDGRQIRVDQA 82
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 1 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 60
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 61 TEDAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 1 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 60
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 61 TEDAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|42567949|ref|NP_197404.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005259|gb|AED92642.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 172
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 47 MVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMD 106
V+ + E L+K FS FG+V VK++ +E T++S GY ++ + S++DA A+E+M+
Sbjct: 80 FVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAMN 139
Query: 107 HKNLDGRLIYVDIAKPGKDR 126
K DGR I V +PG R
Sbjct: 140 GKFFDGRFILVKFGQPGLSR 159
>gi|255535545|ref|YP_003095916.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
gi|255341741|gb|ACU07854.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
Length = 122
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V N+ ++T E +LQ FS FGEV+ K++ D T +S+G+ F++ S +D A+E++
Sbjct: 4 IFVSNINYSTREESLQDLFSEFGEVSSAKIITDRETGRSRGFGFVEM-SDEDGKNAIEAL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ K LDG+ + V AKP +D+
Sbjct: 63 NGKELDGKELNVSEAKPREDK 83
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H L++ FS +GEV E K++ D T +S+G+ F+ ++++ A+E
Sbjct: 9 RCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++++D A+E
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 63 MNGKELDGRNITVNEAQS 80
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++++D A+E
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H L+K FS +G + E K++ D T +S+G+ F+ + S++ A+E
Sbjct: 9 RCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMKDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++++D A+E
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + TL++ FS FG + E +VKD T +S+G+ F+++ S+ +A A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 104 SMDHKNLDGRLIYVDIA--KPGKDRFGGYPRTS 134
M+++ DGR I VD A +P R G+ R++
Sbjct: 62 EMNNQEFDGRTIRVDKAADRPSGPRNDGFNRSN 94
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++++D A+E
Sbjct: 11 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 70
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 71 MNGKELDGRNITVNEAQS 88
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L T + L++ FS FG V E ++V D++ SKG+AF++Y +Q++A E
Sbjct: 48 KLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQEEADKGKEG 107
Query: 105 MDHKNLDGRLIYVDIAKP 122
MD K LDG +I+ D A+P
Sbjct: 108 MDGKFLDGWVIFADYARP 125
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A++ + L R+ +RNLP+ E L FS FG++ E + D SKG+A+IQY
Sbjct: 266 ANIESIRLTGRLFIRNLPYNASEDDLNATFSRFGKIEETHVATDTRHSTSKGFAYIQYVE 325
Query: 95 QDDALLALESMDHKNLDGRLIYV 117
D A+ A + +D K+ GRL+++
Sbjct: 326 SDAAIEAYKQLDGKDFQGRLMHI 348
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + + F+A+G++ V++ K + + ++G+AF + S +A A++
Sbjct: 677 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPK-KFDRTARGFAFADFVSSREAENAMD 735
Query: 104 SMDHKNLDGRLIYVD 118
++ + +L GR + ++
Sbjct: 736 ALRNTHLLGRRLVLE 750
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
SN + + + NL + E L +EF FGE+A V+++ D + +SKG+ ++++T+ +D
Sbjct: 234 SNPDAVANLFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFTNAED 293
Query: 98 ALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSE 144
A ALE+ + LD R I VD + P +D+ P+ +QQ +
Sbjct: 294 AAKALEAKNESLLDNRNIRVDFSTP-RDKSNAGPQQRSNDRQQKFGD 339
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I NL F E +++ F+ G V ++L D T KG+ +++ S ++A A ++
Sbjct: 348 IWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFNAL 407
Query: 106 DHKNLDGRLIYVDIAKP 122
+++ GR + +D A+P
Sbjct: 408 QGQDVGGRPVRLDYAQP 424
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E +L++ FS +G +A+V +V+D T++S+G+ F+ + + +DA A+
Sbjct: 5 GKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMA 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR+I VD A
Sbjct: 65 AMNGKSVDGRMIRVDEA 81
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 56/85 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ ++ + +L + T + +L+ F+ GEV E K+V D + +SKG+ F+ Y + +DA A
Sbjct: 1 MSKKLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
++ +D+ LDGR I+V+ A+P ++R
Sbjct: 61 IKELDNSELDGRNIHVNEARPREER 85
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A++ + L R+ +RNLP+ E L FS FG++ E + D SKG+A+IQY
Sbjct: 266 ANIESIRLTGRLFIRNLPYNASEDDLNAAFSRFGKIEETHVATDTRHSTSKGFAYIQYVE 325
Query: 95 QDDALLALESMDHKNLDGRLIYV 117
D A+ A + +D K+ GRL+++
Sbjct: 326 SDAAIEAYKQLDGKDFQGRLMHI 348
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + + F+A+G++ V++ K + + ++G+AF + S +A A++
Sbjct: 677 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPK-KFDRTARGFAFADFVSSREAENAMD 735
Query: 104 SMDHKNLDGRLIYVD 118
++ + +L GR + ++
Sbjct: 736 ALRNTHLLGRRLVLE 750
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 7 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 66
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
+D A+E M+ K LDGR I V+ A+
Sbjct: 67 XEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|159130709|gb|EDP55822.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
A1163]
Length = 825
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
++ + L+SR+ VRNLP+ E L+ FS FG++ E+ + D + SKG+A++QY
Sbjct: 293 NIEHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEP 352
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A + +D K+ GRL+++
Sbjct: 353 DAAVQAYKELDGKHFQGRLMHI 374
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 760
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 761 ALKNTHLLGRRLVLEFA 777
>gi|70990768|ref|XP_750233.1| pre-rRNA processing protein Mrd1 [Aspergillus fumigatus Af293]
gi|74669789|sp|Q4WJT7.1|MRD1_ASPFU RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|66847865|gb|EAL88195.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
Af293]
Length = 825
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
++ + L+SR+ VRNLP+ E L+ FS FG++ E+ + D + SKG+A++QY
Sbjct: 293 NIEHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEP 352
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A + +D K+ GRL+++
Sbjct: 353 DAAVQAYKELDGKHFQGRLMHI 374
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 760
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 761 ALKNTHLLGRRLVLEFA 777
>gi|392413321|ref|YP_006449928.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390626457|gb|AFM27664.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 101
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ +I V NL F T E+ LQ F +G V K++ D+ T +S+G+ F++ +++++ L A
Sbjct: 1 MSIKIYVGNLSFNTSENELQGFFEPYGAVDSTKIIVDQFTNRSRGFGFVEMSNREEGLRA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKD 125
++ +D K L GR + V+ A+P D
Sbjct: 61 IQELDSKELGGRSLKVNEARPKTD 84
>gi|332529248|ref|ZP_08405212.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332041471|gb|EGI77833.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 110
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S++ V NL ++ + LQ++F AFG+V K++ D + +SKG+ F++ S D A A
Sbjct: 1 MSSKLYVGNLSYSVRDDDLQQQFGAFGDVQSAKVMMDRDSGRSKGFGFVEMGSADQAEAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ + +N+ GR + V+IA+P
Sbjct: 61 IRGLHGQNVGGRDMVVNIARP 81
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + L+K FS +G+V E K++ D T +S+G+ F+ + S+D A+E
Sbjct: 9 RCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A++ + L R+ +RNLP+ E L FS FG++ E + D SKG+A+IQY
Sbjct: 267 ANIESIRLTGRLFIRNLPYNASEDDLSATFSRFGKIEETHVATDTRHSTSKGFAYIQYVE 326
Query: 95 QDDALLALESMDHKNLDGRLIYV 117
D A+ A + +D K+ GRL+++
Sbjct: 327 SDAAIEAYKQLDGKDFQGRLMHI 349
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + + F+A+G++ V++ K + ++G+AF + S +A A++
Sbjct: 678 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPK-KFDHTARGFAFADFVSSREAENAMD 736
Query: 104 SMDHKNLDGRLIYVD 118
++ + +L GR + ++
Sbjct: 737 ALRNTHLLGRRLVLE 751
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++++D A+E
Sbjct: 9 RCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 54/80 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V + F+T + +L++ F+ +GEV E +++ D T +S+G+ F+ YTS ++A A+
Sbjct: 42 SSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAI 101
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
+++D ++L GR + V+ A
Sbjct: 102 QALDGQDLHGRRVRVNYAND 121
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V L T L + F+ FGEVA ++V D +T SKG+ F++Y + +DA +
Sbjct: 78 STNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLEDAAKGI 137
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
E MD K LDG +I+ + A+P
Sbjct: 138 EGMDGKFLDGWVIFAEYARP 157
>gi|9757907|dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana]
Length = 112
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 25 NPCFRTFNLRASL-SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK 83
+P F F++ L SN LA L T + +L++ F+ FG++ E +L+KD+ T++
Sbjct: 7 SPVFLLFSVFEFLFSNCSLA------GLSAYTTDQSLRQLFAPFGQITESRLIKDQQTQR 60
Query: 84 SKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAK 121
KG+ FI + S+DDA AL++++ K ++GRLI+V+ AK
Sbjct: 61 PKGFGFITFESEDDAQKALKALNGKIVNGRLIFVETAK 98
>gi|121702823|ref|XP_001269676.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
gi|119397819|gb|EAW08250.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
Length = 822
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
++ N ++SR+ VRNLP+ E L+ FS +G+V E+ + D + SKG+A++QY
Sbjct: 290 NIDNIRISSRLFVRNLPYDAKESDLEPIFSKYGKVEEIHVAFDTRSTTSKGFAYVQYFDA 349
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A + +D K+ GRL+++
Sbjct: 350 DAAVQAYKELDGKHFQGRLLHI 371
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V+ V + + ++G+ F + S +A A++
Sbjct: 699 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVR-VPQKFDRSARGFGFADFVSAREAENAMD 757
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 758 ALKNTHLLGRRLVLEFA 774
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPP 137
D LDGR + V +A+ G+ Y R PP
Sbjct: 76 DGALLDGRELRVQMARYGRPPDAHYSRRGAPP 107
>gi|403290994|ref|XP_003936587.1| PREDICTED: putative RNA-binding protein 3-like [Saimiri boliviensis
boliviensis]
Length = 159
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A++
Sbjct: 6 GKLFVAGLNFNNDEQPLEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMK 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDG I+VD A
Sbjct: 66 AMNGESLDGGQIHVDHA 82
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T E L+ F +FG ++EV + D+++KKS G+ FI Y + AL A
Sbjct: 252 SGRLYVRNLPYTATEEDLENHFKSFGPLSEVSIPVDDMSKKSVGFGFITYMMPEHALKAF 311
Query: 103 ESMDHKNLDGRLIYVDIAKPG-KDRFGGYPRTSGPPKQQPLSEQDEVADCW 152
S+D GR+I++ AK + R P KQ L + + + W
Sbjct: 312 NSLDGTAFQGRMIHILPAKAKVEKRSSENPSDFKQGKQAALKQSSQSSHNW 362
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKD--EITKKS---KGYA 88
R L +S+I+VRN+PF + ++ F +FGE+ V++ K IT ++ +G+A
Sbjct: 633 RFQLDKKQASSKILVRNVPFQANSGEIESLFKSFGELKSVRMPKKVGSITAQAGSHRGFA 692
Query: 89 FIQYTSQDDALLALESMDHK-NLDGRLIYVDIAKPGKDRFGGYPRTSG 135
F+ + ++ +A A E++ H +L GR + ++ A +D G + +
Sbjct: 693 FVDFLTKQEAKKAFEALCHSTHLYGRRLVLEWADAEEDSVEGLRKKTA 740
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR++V+NLP +E L+KEF +G + +VKL+ + + K + +AF+ Y ++A A
Sbjct: 2 SRLIVKNLPSKINEEKLKKEFEPYGTITDVKLMFSK-SGKFRRFAFVGYQFTENADKAKS 60
Query: 104 SMDHKNLDGRLIYVD 118
+D + + I V+
Sbjct: 61 KLDKSLILNQKISVE 75
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK----SKGYAFIQYTSQDDALLA 101
I V+NL F+T E +L+ FS+ GE+ + + + K S GY F+ Y + D A
Sbjct: 542 IFVKNLNFSTDEESLKTHFSSCGELKSCLISRKKTHKSNALLSMGYGFVCYARKKDGQKA 601
Query: 102 LESMDHKNLD 111
L+++ LD
Sbjct: 602 LKTLQGTMLD 611
>gi|355704773|gb|EHH30698.1| RNA-binding motif protein 3 [Macaca mulatta]
Length = 157
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A+ +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 105 MDHKNLDGRLIYV 117
M+ ++LDGR I V
Sbjct: 67 MNGESLDGRQIRV 79
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 40 YPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDAL 99
Y A RI V NLP+ L++ FS G+V + ++V D T +S+G+ F+Q +++++
Sbjct: 203 YDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVN 262
Query: 100 LALESMDHKNLDGRLIYVDIAK 121
+A+ ++D +NL+GR I V++A+
Sbjct: 263 VAIAALDGQNLEGRAIKVNVAE 284
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P +++ V NLP+ L F G V +++ + T +S+G+ F+ ++ ++A
Sbjct: 110 PEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEK 169
Query: 101 ALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRT 133
A+E + ++GR + V+ A P R PR
Sbjct: 170 AVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRV 202
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 55 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 114
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
++D A+E M+ K LDGR I V+ A+
Sbjct: 115 TEDAMRSAIEGMNGKELDGRNITVNEAQS 143
>gi|91786529|ref|YP_547481.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91695754|gb|ABE42583.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 134
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+T + LQ+ F AFG + K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ M+ ++L GR I V+ A+P
Sbjct: 61 IAGMNGQSLGGRSITVNEARP 81
>gi|398803602|ref|ZP_10562623.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398096229|gb|EJL86556.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 133
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+T + LQ+ F AFG + K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ M+ ++L GR I V+ A+P
Sbjct: 61 IAGMNGQSLGGRSITVNEARP 81
>gi|395326326|gb|EJF58737.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 831
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ +RNLPFT E +++ F A G+V + LV D T++SKG A++ + + A+ A E
Sbjct: 267 SRLFLRNLPFTCTEDEIREHFQAHGDVTQAHLVLDPKTQQSKGLAYVTFAKPEQAVAAYE 326
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSE 144
++D + GRL++V P DR G G K++ + +
Sbjct: 327 ALDKTSFQGRLLHV---LPAVDRKGKVEDDKGEGKKRTVKQ 364
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++++V+N+PF + +++ F A ++ V+L + + +++G+AF+++T++ +A A
Sbjct: 676 TKMIVKNVPFEVTKKDIRELFGAHAQLKSVRLPR-KFDHRTRGFAFLEFTTRHEAEQAYA 734
Query: 104 SMDHKNLDGRLIYVDIAKPG 123
++ H +L GR + ++ A+ G
Sbjct: 735 TLRHTHLLGRHLVLEWAEEG 754
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAF----GEVAEVKLV-KDEITKKSKGYAFIQYTSQDDA 98
SR++V+NLP + L+K F G + +VKLV K + T S+ + FI Y S +A
Sbjct: 2 SRLIVKNLPAYLTQERLRKHFETSDGPGGTLTDVKLVLKPDGT--SRRFGFIGYKSPREA 59
Query: 99 LLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQP 141
A + + +D I VD+ KD PR + P+ P
Sbjct: 60 ERAKKWFNRSFVDSSRITVDVVDGAKD--APAPRPNKRPRLGP 100
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T L++EF+ FGEV ++V D ++ SKG+ F+QY + ++A +E M
Sbjct: 51 LFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGM 110
Query: 106 DHKNLDGRLIYVDIAKP 122
D K LDG +I+ + A+P
Sbjct: 111 DGKFLDGWVIFAEYARP 127
>gi|333379583|ref|ZP_08471304.1| hypothetical protein HMPREF9456_02899 [Dysgonomonas mossii DSM
22836]
gi|332884976|gb|EGK05229.1| hypothetical protein HMPREF9456_02899 [Dysgonomonas mossii DSM
22836]
Length = 96
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL F+T +LQ+ F+A+GEV K++ D T +S+G+ F++ + + A++ +
Sbjct: 3 IYVSNLNFSTTSESLQELFTAYGEVESTKIITDRETGRSRGFGFVEMPNDAEGQKAIDEL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDRF-GGYPRTSG 135
++ + +G+ I V IA+P DR GGY G
Sbjct: 63 NNADYEGKTITVTIARPKTDRASGGYNNRGG 93
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 18 NSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK 77
N ++ RTF + + + R+ +RNL +TT E ++K F A G+++EV +
Sbjct: 298 NEKDKKKEAIMRTFTTDREIEDIGESGRLFIRNLSYTTTEDDIKKFFEAHGKLSEVYIPI 357
Query: 78 DEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAK 121
D +KKSKG AF+ + + A+ A +D K L GR+I++ AK
Sbjct: 358 DRDSKKSKGIAFVLFMIPEQAMRAANDLDGKTLQGRIIHILAAK 401
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++++I ++N+ F ++K F+ +GE+ V+L + T +G+ F++Y ++ +A A
Sbjct: 760 VSTKISIKNIAFECKPIEIRKLFTTYGELKSVRL-PSKPTGGHRGFGFVEYLTEQEAKNA 818
Query: 102 LESMDHKNLDGRLIYVDIAKPGKD 125
+E++ + +L GR + + A+ K+
Sbjct: 819 MEALQNSHLYGRHLILSFAEEDKN 842
>gi|284022113|sp|Q925G0.2|RBM3_RAT RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
Length = 155
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|297793541|ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 56/78 (71%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V L T + +L++ F+ FG++ E +L++D+ T++ KG+ FI + S+DDA AL+
Sbjct: 7 TQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNALK 66
Query: 104 SMDHKNLDGRLIYVDIAK 121
+++ K ++GRLI+V+ AK
Sbjct: 67 ALNGKIVNGRLIFVEAAK 84
>gi|408398680|gb|EKJ77809.1| hypothetical protein FPSE_02043 [Fusarium pseudograminearum CS3096]
Length = 178
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FG V E +VKD T +S+G+ F++YT + DA A+
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIA 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRNIRVDKA 78
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 102 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 161
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 162 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 207
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 355 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 414
Query: 106 DHKNLDGRLI 115
+ L R++
Sbjct: 415 NGYTLGNRVL 424
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 54/80 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V + F+T + +L++ F+ +GEV E +++ D T +S+G+ F+ YTS ++A A+
Sbjct: 42 SSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAI 101
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
+++D ++L GR + V+ A
Sbjct: 102 QALDGQDLHGRRVRVNYAND 121
>gi|325185984|emb|CCA20488.1| RNAbinding protein putative [Albugo laibachii Nc14]
Length = 754
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ VRNLPF+ E L+ F AFG+VAEV + DE TK+ KG+ F+ + + DA AL+
Sbjct: 243 NRLFVRNLPFSAVEEDLRTIFEAFGKVAEVHIPLDE-TKRRKGFGFVSFDTVSDAQKALQ 301
Query: 104 SMDHKNLDGRLIYVDIAK 121
++D GR++YV A+
Sbjct: 302 NVDGIAFQGRVLYVTFAE 319
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDA 98
L + + ++NL FTT E TL+ FS FG++ +V + K + S G+ F+++ ++DA
Sbjct: 543 LRNTLCLKNLSFTTRESTLETYFSKFGKLRKVTIAKSRDKRGGILSMGFGFVEFADENDA 602
Query: 99 LLALESMDHKN--LDGRLIYVDIAKPGKDR 126
AL + + + +DG + V +++ +R
Sbjct: 603 QRALSASEQSSPIIDGHSLRVTLSQKKVER 632
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 17 ANSLTNRENPCFRTFNLRASLSNYPL-----------ASRIMVRNLPFTTHEHTLQKEFS 65
A S + + +P +LR +LS + S+I++RN+ F H ++
Sbjct: 605 ALSASEQSSPIIDGHSLRVTLSQKKVERKTSDKDGKSTSKIIIRNVAFEATVHDIRSLCG 664
Query: 66 AFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAK 121
AFG++ V++ K + + +G+AF+++ ++ +A A S+ +L GR + ++ A+
Sbjct: 665 AFGQLKRVRMPK-KFDGRHRGFAFVEFMTEQEAKDAFNSLCKSHLYGRHLVLEWAE 719
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ VRNLP L+ F + GEV + +V + KKS+ + F+ Y + D A A
Sbjct: 8 TRLYVRNLPTYVDNARLRAHFESQGEVTDAAVVLTKADKKSRRFGFVGYKTSDQARRACA 67
Query: 104 SMDHKNLDGRLIYVDIAKP 122
D + V A P
Sbjct: 68 YFHQTYFDSCKLNVSFAVP 86
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%)
Query: 37 LSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQD 96
LS+ + ++ + L T + L++ FS+FG++ + K+V D T +SKG+AF+ Y++ D
Sbjct: 33 LSSTLTSPKLFISGLSRLTTDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTID 92
Query: 97 DALLALESMDHKNLDGRLIYVDIAK 121
+A A E M+ K LDG +I+VD AK
Sbjct: 93 EAEKAREEMNAKFLDGWVIFVDPAK 117
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+ ++ L++ FS FG VA +++ + T +SKG+ F++ S+ +A A
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
++ M+ + L GR + V+ A+P + R PRT G
Sbjct: 61 IQGMNGQPLGGRSLVVNEARPMEPR---PPRTGG 91
>gi|297263082|ref|XP_001089948.2| PREDICTED: putative RNA-binding protein 3 [Macaca mulatta]
Length = 135
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A +A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMR 65
Query: 104 SMDHKNLDGRLIYVDIAKPGK 124
+M+ +LDGR I V A GK
Sbjct: 66 AMNGDSLDGRQIRV--AHAGK 84
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 60/96 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ V NLPF E+ L++ F +G+V E+ L+ D++T +S+G+AF+ + A A++
Sbjct: 4 TRLYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAID 63
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
S++ ++ GR I V+ AKP ++R + SG ++
Sbjct: 64 SLNGTSISGRQIVVNEAKPREERPHRHRENSGRSRR 99
>gi|452851689|ref|YP_007493373.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
gi|451895343|emb|CCH48222.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
Length = 87
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NLP++ E ++ F+A+GEV VKL++D T + +G+ F++ S+D L A
Sbjct: 1 MSKNIYVGNLPWSATEDEVRAAFAAYGEVTSVKLIEDRETGRPRGFGFVE-MSEDGYLDA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+E++D K+ GR I V+ AKP +R
Sbjct: 60 IEALDGKDFGGRNIKVNEAKPRVER 84
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + T + L++ F+ FGEVA+V L+ D+ T +SKG+ F++ + A A++ +
Sbjct: 3 IYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKGL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ +L GR I V+ AKP DR
Sbjct: 63 NGTDLQGRSIKVNEAKPRSDR 83
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E +L++ FS +G +A+V +V+D T++S+G+ F+ + + +DA A+
Sbjct: 5 GKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMA 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR+I VD A
Sbjct: 65 AMNGKSVDGRMIRVDEA 81
>gi|373459913|ref|ZP_09551680.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
gi|371721577|gb|EHO43348.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
Length = 99
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V N+P +T E T++ F +G V+EVKL++D T + +G+ F+ S D+A A++++
Sbjct: 3 IYVGNIPKSTDEQTIRDLFEEYGSVSEVKLLRDRYTGELRGFGFVTMESDDEAQNAIDNI 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR--FGGY 130
++ +L GR + V+ A+P +R GGY
Sbjct: 63 NNTDLGGRTLVVNKARPRTERPNRGGY 89
>gi|320586919|gb|EFW99582.1| glycine-rich RNA-binding protein [Grosmannia clavigera kw1407]
Length = 462
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L + T E TL+++F FG V E +VKD T +S+G+ F++Y ++ DA A+
Sbjct: 283 AKLFIGGLAWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYANEADAETAIA 342
Query: 104 SMDHKNLDGRLIYVDIA 120
SM++ DGR I VD A
Sbjct: 343 SMNNIEFDGRTIRVDRA 359
>gi|225435044|ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 33 LRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQY 92
L+ S +S I V L T L + FS FG V + +L+KD T++ KG+ F+++
Sbjct: 14 LKPWFSARRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKF 73
Query: 93 TSQDDALLALESMDHKNLDGRLIYVDIAK---PGKD 125
S+ DA AL++M+ + + GRLI+V+IAK PG+D
Sbjct: 74 ESEVDAEKALKAMNGRIVRGRLIFVEIAKTTRPGED 109
>gi|148672336|gb|EDL04283.1| mCG19744, isoform CRA_b [Mus musculus]
Length = 233
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D AL
Sbjct: 23 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALN 82
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 83 CTRAINNKQLFGRVIKASIA 102
>gi|17532863|ref|NP_496057.1| Protein EXC-7 [Caenorhabditis elegans]
gi|3876753|emb|CAA85327.1| Protein EXC-7 [Caenorhabditis elegans]
Length = 456
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ +++ LP + ++ F++ GE+ KLV+D++T +S GY F+ Y ++DAL A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
S + L + I V A+P D+ G SG PK L E + +
Sbjct: 102 SFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESI 147
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL T + L + FS FG + VK+++D +T++ KGYAF+ ++ +A A+ S+
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 106 DHKNLDGRLIYV 117
+ NL G+ + V
Sbjct: 435 NGTNLAGKTLQV 446
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
S + V +P + H L+ F FG++ +++ D +T SKG F+++ +D+A +A+
Sbjct: 127 GSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186
Query: 103 ESMD 106
++++
Sbjct: 187 KTLN 190
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK---DRFGGYPRTSGPPKQQ 140
D LDGR + V +A+ G+ +GG R GPPK+
Sbjct: 76 DGALLDGRELRVQMARYGRPPDSHYGGGRR--GPPKKH 111
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A++ + L R+ +RNLP+ E L FS FG++ E + D SKG+A+IQY
Sbjct: 276 ANIESIRLTGRLFIRNLPYNASEDDLSAAFSRFGKIEETHVAIDTRHSTSKGFAYIQYVE 335
Query: 95 QDDALLALESMDHKNLDGRLIYV 117
D A+ A + +D K+ GRL+++
Sbjct: 336 SDAAIEAYKQLDGKDFQGRLMHI 358
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + + F+A+G++ V++ K + + ++G+AF + S +A A++
Sbjct: 687 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPK-KFDRTARGFAFADFVSSREAENAMD 745
Query: 104 SMDHKNLDGRLIYVD 118
++ + +L GR + ++
Sbjct: 746 ALRNTHLLGRRLVLE 760
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E +L F +G + +V +++D+ T +S+G+ F++Y + +DA AL+
Sbjct: 5 GKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALD 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K LDGR I VD A
Sbjct: 65 AMNGKTLDGRAIRVDEA 81
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H LQ FS +GE+ + K++ D T +S+G+ F+ + S++ A+E
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 67 MNGKELDGRSITVNEAQS 84
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L T + L+ +FS FG++ E ++V D I+ +S+G+ F++Y + +DA E
Sbjct: 44 TKLFISGLSRQTTDEGLRAKFSEFGQLVEARVVTDRISGRSRGFGFVRYATLEDAAKGKE 103
Query: 104 SMDHKNLDGRLIYVDIAK 121
MD K LDG +I+ D AK
Sbjct: 104 GMDGKFLDGWVIFADFAK 121
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 215
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 358 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 106 DHKNLDGRLIYV 117
+ L R++ V
Sbjct: 418 NGYTLGNRVLQV 429
>gi|148684930|gb|EDL16877.1| mCG114434 [Mus musculus]
Length = 153
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI +T+ + A A+ +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSQGFDFITFTNPEHASDAMRA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ ++LDGR I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|21313088|ref|NP_080301.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Mus musculus]
gi|81916891|sp|Q9CZ96.1|ZCRB1_MOUSE RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=MADP-1;
AltName: Full=U11/U12 small nuclear ribonucleoprotein 31
kDa protein; Short=U11/U12 snRNP 31 kDa protein
gi|12849869|dbj|BAB28513.1| unnamed protein product [Mus musculus]
gi|25005468|dbj|BAC23140.1| MADP-1 protein [Mus musculus]
gi|34849714|gb|AAH58368.1| Zcrb1 protein [Mus musculus]
Length = 217
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D AL
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+ F FG V E +VKD T +S+G+ F++Y+ +DA A++
Sbjct: 2 SKLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAID 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRTIRVDRA 78
>gi|351730017|ref|ZP_08947708.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 115
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S+I V NLP++ + L+ FS FG V K++ D T +SKG+ F++ S + A A
Sbjct: 1 MSSKIYVGNLPYSVTDSVLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ ++ ++DGR I V++A+P
Sbjct: 61 ISALHGMSVDGRSIVVNLARP 81
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 41 PLAS-RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDAL 99
PL + ++ V L T + LQ F+ FG + E K+V D ++ +SKG+ F++Y + ++A
Sbjct: 59 PLTTPKLFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYATIEEAE 118
Query: 100 LALESMDHKNLDGRLIYVDIAKP 122
A + M+ K LDG +I+VD AKP
Sbjct: 119 KARQEMNAKFLDGWVIFVDPAKP 141
>gi|74206672|dbj|BAE41588.1| unnamed protein product [Mus musculus]
gi|148672337|gb|EDL04284.1| mCG19744, isoform CRA_c [Mus musculus]
Length = 216
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D AL
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ + L T L++ F+ FGEV ++V D +T SKG+ FI+Y + +DA +E M
Sbjct: 38 LFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGIEGM 97
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDE 147
D K LDG +I+ + A+ PRT PP+Q ++ Q +
Sbjct: 98 DGKFLDGWVIFAEYAR---------PRT--PPQQPEMNSQPQ 128
>gi|291225111|ref|XP_002732544.1| PREDICTED: RNA binding motif protein, Y-linked, family 1, member
A1-like [Saccoglossus kowalevskii]
Length = 479
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L T E L+ E S FG+VA+V L+KD+ T +S+G+AF+ Y + DA LA+
Sbjct: 12 TKVYLAGLSADTDETALELEMSKFGQVADVLLIKDKTTGRSRGFAFVTYETSSDAALAVT 71
Query: 104 SMDHKNLDGRLIYVDIAK 121
++ K G++I VD AK
Sbjct: 72 GLNGKEFMGKVIKVDHAK 89
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E +L++ FS +G +A+V +V+D T++S+G+ F+ + + +DA A+
Sbjct: 5 GKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMA 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR+I VD A
Sbjct: 65 AMNGKSVDGRMIRVDEA 81
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T+ TL++ F+ FG+V + K++ D T +S+G+ F+ ++S+ L A+E+
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E L++ F +G+++EV +VKD TK+S+G+ F+ + + DDA A+
Sbjct: 4 GKLFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMM 63
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K +DGR I VD A
Sbjct: 64 AMNGKAVDGRQIRVDQA 80
>gi|77917576|ref|NP_001030112.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Rattus norvegicus]
gi|116256279|sp|Q499V6.1|ZCRB1_RAT RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|71121799|gb|AAH99747.1| Zinc finger CCHC-type and RNA binding motif 1 [Rattus norvegicus]
gi|149017620|gb|EDL76624.1| zinc finger CCHC-type and RNA binding motif 1 [Rattus norvegicus]
Length = 217
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D AL
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|449434572|ref|XP_004135070.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cucumis sativus]
Length = 234
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V N ++ L FS FG++A V ++KD T+KS+G AF+Q+ SQDDA+
Sbjct: 66 PSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 125
Query: 101 ALESMDHKNLDGRLIYVDIA 120
A + M K L+GR++ IA
Sbjct: 126 AAKQMHGKILNGRVLKAAIA 145
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis lupus
familiaris]
Length = 162
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ F +FG ++EV +VKD T++S+G+ FI +T + A A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|57106414|ref|XP_534835.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Canis lupus familiaris]
Length = 217
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D AL
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T L++ F+ FGEV ++V D +T SKG+ F++Y S +DA +E M
Sbjct: 50 LFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEGM 109
Query: 106 DHKNLDGRLIYVDIAKP 122
D K LDG +I+ + A+P
Sbjct: 110 DGKFLDGWVIFAEYARP 126
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 215
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 358 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 106 DHKNLDGRLI 115
+ L R++
Sbjct: 418 NGYTLGNRVL 427
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 121 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 180
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 181 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 226
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 374 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 433
Query: 106 DHKNLDGRLI 115
+ L R++
Sbjct: 434 NGYTLGNRVL 443
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 7/92 (7%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V + + T + +L++ F +GEV E +++ D T +S+G+AF+ YTS ++A A+
Sbjct: 39 SSKVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAI 98
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTS 134
+++D ++L GR + V+ A DR PRTS
Sbjct: 99 QALDGQDLHGRRVRVNYA---NDR----PRTS 123
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E +L++ FS +G +A+V +V+D T++S+G+ F+ + + +DA A+
Sbjct: 5 GKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMA 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K++DGR+I VD A
Sbjct: 65 AMNGKSVDGRMIRVDEA 81
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ ++I V NLP++ + +L+ F+ FG VA K++ D T +SKG+ F++ S + A A
Sbjct: 1 MTTKIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ + ++DGR I V++A+P
Sbjct: 61 ITGLHGMSVDGRSIVVNLARP 81
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + TL++ FS +G + E +VKD T +S+G+ F+++ S+ +A A+
Sbjct: 2 SKLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMN 61
Query: 104 SMDHKNLDGRLIYVDIA---KPGKDRFGGYPRTS 134
+M ++ DGR+I VD A +PG+ R G+ R++
Sbjct: 62 AMSNQEFDGRMIRVDKAADRQPGQ-RSEGFSRSN 94
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 113 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 172
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 173 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 218
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 361 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 420
Query: 106 DHKNLDGRLI 115
+ L R++
Sbjct: 421 NGYTLGNRVL 430
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ + V LP + L+ FS FG++ +++ D IT SKG FI++ + +A A+
Sbjct: 198 GANLYVSGLPKNMTQSDLESLFSPFGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAI 257
Query: 103 ESMD 106
+ ++
Sbjct: 258 KELN 261
>gi|145552619|ref|XP_001461985.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429822|emb|CAK94612.1| unnamed protein product [Paramecium tetraurelia]
Length = 304
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 11/100 (11%)
Query: 40 YPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDAL 99
Y +S I + NL + +E + FS +GE+ +V LV+D+IT KSKG+ F+ Y Q +
Sbjct: 25 YNKSSYIFIANLNYAMNEGDIAIVFSQYGEIVDVHLVRDKITGKSKGFCFLAYEDQRSTI 84
Query: 100 LALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
LA+++ +H + GRL+ VD + R PPK+
Sbjct: 85 LAVDNFNHAEICGRLLRVD-----------HVREFKPPKE 113
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T E L++ F+ G ++E+ D +TKKSKG+AFI Y ++A+ AL
Sbjct: 414 SGRLFVRNLPYTCTEEELKELFTKHGPLSEMHFPIDSLTKKSKGFAFITYMIPENAVAAL 473
Query: 103 ESMDHKNLDGRLIYV---DIAKPGKDRFGGYPRTSGPPKQQ 140
+D GR++++ I K D G P +S +Q+
Sbjct: 474 AQLDGHIFQGRMLHLLPSTIKKEKADSDAGAPGSSSYKRQK 514
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLA 101
++++VRN+PF L++ F FGE+ V+L K T +G+ FI + ++ DA A
Sbjct: 846 GTKLLVRNIPFQASVRELRELFCTFGELKTVRLPKKAAGTGNHRGFGFIDFVTKQDAKKA 905
Query: 102 LESMDHK-NLDGRLIYVDIA 120
+++ H +L GR + ++ A
Sbjct: 906 FDALCHSTHLYGRRLVLEWA 925
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK---GYAFIQYTSQDDAL 99
S + ++NL F+T E TLQ+ FS G+V + K + GY F+QY + A
Sbjct: 744 GSTLFIKNLNFSTTEQTLQEIFSKCGKVKSCSVSKKKDKSGKSLSMGYGFVQYHKAEAAQ 803
Query: 100 LALESMDHKNLDGRLIYVDIAK 121
AL + H N+DG + + I++
Sbjct: 804 KALRQLQHCNVDGHQLQLKISE 825
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E + F+AFG V + +K KD K + + F+ + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFKSMFAAFGTVTDCTLKFTKD---GKFRKFGFVGFRSEEEANRA 58
Query: 102 LESMDHKNLDGRLIYVDIAKPGKD 125
L+ ++ +D + V+I K D
Sbjct: 59 LKHLNKSFVDTSRVTVEICKAFGD 82
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 25 NPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS 84
N F F ++ S+++ + R V L + T + L++ FS +GE+ E K++ D T +S
Sbjct: 26 NTNFLGF-IQFSMASSDVEYRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRS 84
Query: 85 KGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+G+ F+ + S+ A+E M+ +NLDGR I V+ A+
Sbjct: 85 RGFGFVTFASEQSMKDAIEGMNGQNLDGRNITVNEAQS 122
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V NL ++T + +L+ FS +G+V E K+V D+ + +S+G+AF+ + + A+E
Sbjct: 8 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 67
Query: 105 MDHKNLDGRLIYVDIAKP---GKDRFG 128
M+ +L+GR I VD A+P G+DR G
Sbjct: 68 MNGLDLEGRAITVDKAQPQGVGRDRNG 94
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V NL ++T + +L+ FS +G+V E K+V D+ + +S+G+AF+ + + A+E
Sbjct: 44 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 103
Query: 105 MDHKNLDGRLIYVDIAKP---GKDRFG 128
M+ +L+GR I VD A+P G+DR G
Sbjct: 104 MNGLDLEGRAITVDKAQPQGVGRDRNG 130
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 215
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 358 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
Query: 106 DHKNLDGRLIYV 117
+ L R++ V
Sbjct: 418 NGYTLGNRVLQV 429
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 119 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 178
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 179 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 224
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 372 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 431
Query: 106 DHKNLDGRLI 115
+ L R++
Sbjct: 432 NGYTLGNRVL 441
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ S++ V NL F T E L+ FS G + +V L D T + +G+AF+ + + +++ LA
Sbjct: 1 MNSKLYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
E ++ +L GR I V+ A+P + GG R GP ++
Sbjct: 61 TEKLNGTDLGGRAITVNEARPKEATGGGGSRNFGPDRK 98
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V L F T E L+ FS FG + E +L++D T + KG+ F++Y+SQ A A
Sbjct: 24 FSTEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKA 83
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+++MD + + GR+I+V+ AK
Sbjct: 84 VKAMDGRIIRGRIIFVETAK 103
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 215
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 363 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 422
Query: 106 DHKNLDGRLIYV 117
+ L R++ V
Sbjct: 423 NGYTLGNRVLQV 434
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H LQ FS +GE+ + K++ D T +S+G+ F+ + S++ A+E
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR + V+ A+
Sbjct: 67 MNGKELDGRQVTVNEAQS 84
>gi|374812572|ref|ZP_09716309.1| RNA-binding protein [Treponema primitia ZAS-1]
Length = 90
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A ++ V NL + THE L+ FSAFG V VK++ D T SKG+ F++ ++ +A A
Sbjct: 1 MAKKLYVGNLSYNTHEDNLRSLFSAFGTVESVKIITDRDTGNSKGFGFVEMSTDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ + +LDGR I V+ A
Sbjct: 61 ISGTNSTDLDGRAIKVNEA 79
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 124 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 183
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 184 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 229
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 377 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 436
Query: 106 DHKNLDGRLI 115
+ L R++
Sbjct: 437 NGYTLGNRVL 446
>gi|121595278|ref|YP_987174.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|222111562|ref|YP_002553826.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|120607358|gb|ABM43098.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|221731006|gb|ACM33826.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 102
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +R+ V NL ++ + +L ++FS FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MNNRLYVGNLAYSVRDESLHQQFSQFGSVTSAKVMMERDTGRSKGFGFVEMGSDSEAQDA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR--FGG 129
+ ++ +++DGR + V++A+P + R FGG
Sbjct: 61 INGLNGRSVDGRALTVNVARPMEARPSFGG 90
>gi|449473457|ref|XP_004153886.1| PREDICTED: uncharacterized protein LOC101209252 [Cucumis sativus]
Length = 267
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V N ++ L FS FG++A V ++KD T+KS+G AF+Q+ SQDDA+
Sbjct: 72 PSKSTLCVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 131
Query: 101 ALESMDHKNLDGRLIYVDIA 120
A + M K L+GR++ IA
Sbjct: 132 AAKQMHGKILNGRVLKAAIA 151
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 110 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 169
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 170 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 215
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 363 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 422
Query: 106 DHKNLDGRLIYV 117
+ L R++ V
Sbjct: 423 NGYTLGNRVLQV 434
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
R+ VRNLP+T E L+ F +FG ++EV L D++ KK KG+AF+Q+ +DA ALE
Sbjct: 333 GRLFVRNLPYTCTEDDLRDLFGSFGMLSEVHLPVDDV-KKGKGFAFVQFVIPEDAGKALE 391
Query: 104 SMDHKNLDGRLIYV 117
+D GRL+++
Sbjct: 392 QLDRHAFHGRLLHI 405
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R++V+N+P E L + F+ GEV++ K+V+ + KS+ +AF+ +T++ DA AL+
Sbjct: 15 TRLIVKNVPKHVDEKRLWQHFAERGEVSDAKIVRTK-DGKSRQFAFVGFTTESDAEEALK 73
Query: 104 SMDHKNLDGRLIYVDIAKP 122
+ LD I V+ A+P
Sbjct: 74 YYNQTFLDTSRIQVERAQP 92
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I++RN+PF +++ S+FG++ V+L K + +G+AF+ + + +A+ A +
Sbjct: 756 TKIIIRNIPFQATAKEIRELCSSFGQLKRVRLPK-KFDGGHRGFAFVDFLTAQEAMGAKK 814
Query: 104 SMDHKNLDGRLIYVDIAKPGKD---------RFGGYPRTSGPP--KQQPLSEQDEVAD 150
S++ + GR + + A+ G+D R P G P +Q+ S D+ AD
Sbjct: 815 SLESTHFYGRHLVGEWAEDGEDMDTLRAKAARDLRGPSNGGRPAKRQKAASSGDDFAD 872
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I+V+NLP++ L K F AFG+V V L SK A +++ + DA A + +
Sbjct: 533 ILVKNLPYSAEAAELAKRFGAFGDVGRVLL------PPSKTVALVEFLAASDAKKAFKRL 586
Query: 106 DHKNLDGRLIYVDIA--KPGKDRFGGYPRTSGPPKQQPLSEQ 145
L+Y++ A K KD F S P P SE+
Sbjct: 587 ACARFQHVLLYLEWAPLKAFKDTF----EPSSKPASLPASEK 624
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 5 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 64
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
D A+E M+ K LDGR I V+ A+
Sbjct: 65 XXDAMRSAIEGMNGKELDGRNITVNEAQS 93
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 54/79 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ V NL + T + TL++ FS FGEV + +++D T +++G+ F+ +++++ A A++
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 104 SMDHKNLDGRLIYVDIAKP 122
+++ + LDGR I V++A
Sbjct: 62 ALNEQELDGRRIRVNVANA 80
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S+I + NL ++T++ L + FS FG++++ ++KD T +S+G+ F+ Y + +A ALE
Sbjct: 5 SKIYISNLSWSTNDEDLARAFSPFGQISDYIVMKDRQTGRSRGFGFVTYANDREASSALE 64
Query: 104 SMDHKNLDGRLIYVDIA 120
SM+ LDGR I V+ A
Sbjct: 65 SMNEVELDGRRIRVNYA 81
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ + L + + L++ FS+FGEV E +++ D T +S+G+ F+ Y+ D A A
Sbjct: 35 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 94
Query: 102 LESMDHKNLDGRLIYVDIA--KPGKDR 126
+ +MD K +DGR + V++A +P +R
Sbjct: 95 ISAMDGKEIDGRQVRVNMANERPAGNR 121
>gi|194768695|ref|XP_001966447.1| GF22183 [Drosophila ananassae]
gi|190617211|gb|EDV32735.1| GF22183 [Drosophila ananassae]
Length = 939
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ RI RNL +TT E LQK F FG V EV L D++T+K KG+ + Y + AL A
Sbjct: 371 SGRIFFRNLAYTTTEEELQKLFEQFGPVVEVSLPVDKLTRKIKGFGTVTYMMPEHALKAF 430
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
++D + GRL+++ PGKD
Sbjct: 431 NALDGTDFHGRLLHL---LPGKD 450
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT----KKSKGYAFIQYTSQDDA 98
++ +VRN+PF H ++ F AFGE+ +++ K + + +G+ F+ Y ++ +A
Sbjct: 802 GTKFLVRNIPFQATYHEVRDIFKAFGELKSLRIPKKATSGAGGESHRGFGFVDYMNKAEA 861
Query: 99 LLALESMD-HKNLDGRLIYVD 118
A E++ +L GR + ++
Sbjct: 862 KRAFEAISASTHLYGRRLVLE 882
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFG-----EVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
+ +RNL F T + T++K F G E+A K ++ S GY FIQ+ A
Sbjct: 699 LFLRNLNFKTTKETVEKHFRHLGTIHTLEIAVRKDAQNPSNVHSLGYGFIQFKKAAVAEH 758
Query: 101 ALESMDHKNLDGRLIYV---DIAKPGKDRFGGYPRTSGPPKQ 139
AL++M ++DG + + D +D G R + KQ
Sbjct: 759 ALKNMQLTHIDGNPVEIKRSDRVLKSQDNEGAQRRLTAQKKQ 800
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SRI+V+ LP E L++ F A G + +++L K K + + F+ Y+++D+A A++
Sbjct: 2 SRIIVKQLPKHITEEKLRQIFGAQGTITDLQL-KYTPDGKFRQFCFVGYSTEDEAQAAIK 60
Query: 104 SMDHKNLDGRLIYVD 118
D+ + + V+
Sbjct: 61 HFDNTCIQTSRVRVE 75
>gi|393239414|gb|EJD46946.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 769
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++R+ VRNL F+ E L+ FSA G + +V + D K SKG AF+ Y++ D+A A
Sbjct: 245 SARLFVRNLAFSCTESDLKSHFSAHGTLVQVHIPLDTANKTSKGLAFVTYSTPDEASAAR 304
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDEVA 149
E++D + GRL+++ P +R P PK Q L +Q E A
Sbjct: 305 EALDGTSFQGRLLHI---LPAIERR--KPAAPADPKTQTLKQQREAA 346
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR++V+NLP E L++ F+A G V +VK++ ++ S+ + F+ Y +++DA ALE
Sbjct: 5 SRLIVKNLPSYLTESRLREHFAAKGLVTDVKVLYNQ-DGSSRRFGFVGYKTEEDARKALE 63
Query: 104 SMDHKNLDGRLIYVDIAKPGKD 125
D + I V + + KD
Sbjct: 64 YFDRTYVGTSKISVQVVQGTKD 85
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++++V+N+PF L+ F A G + V+L K + +S+G+AF+++ S +A A
Sbjct: 646 SAKMIVKNVPFEATRKDLRALFGAHGHLKSVRLPK-KFNSRSRGFAFLEFVSHQEAEHAF 704
Query: 103 ESMDHKNLDGRLIYVDIA 120
++ H + GR + ++ A
Sbjct: 705 ATLRHTHFLGRHLVLEWA 722
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPP 137
D LDGR + V +A+ G+ Y R PP
Sbjct: 76 DGALLDGRELRVQMARYGRPPDSMYSRRGPPP 107
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 112 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 171
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 172 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 217
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 365 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 424
Query: 106 DHKNLDGRLIYV 117
+ L R++ V
Sbjct: 425 NGYTLGNRVLQV 436
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 112 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 171
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
+++ L + I V IA+P + G SG PK S+ + +
Sbjct: 172 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESL 217
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 365 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 424
Query: 106 DHKNLDGRLIYV 117
+ L R++ V
Sbjct: 425 NGYTLGNRVLQV 436
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 53/79 (67%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G+V +V + +D +++S+G+AF+++ + DA A++ M
Sbjct: 17 LKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFAFVRFYDKRDAEDAMDCM 76
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D K +DGR++ V +A+ G+
Sbjct: 77 DGKTMDGRVLRVAMARYGR 95
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ + L T L++ F+ FGEV ++V D +T SKG+ F++Y + +DA +E M
Sbjct: 38 LFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGM 97
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDE 147
D K LDG +I+ + A+ PRT PP+Q ++ Q +
Sbjct: 98 DGKFLDGWVIFAEYAR---------PRT--PPQQPEMNSQPQ 128
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + + LQ F+ +GEV K+V D+ T +SKG+ F++ + ++A A+E++
Sbjct: 3 IYVGNLSWNLKDQDLQNLFAPYGEVTSAKIVSDKFTNRSKGFGFVEMATDEEAKAAIEAL 62
Query: 106 DHKNLDGRLIYVDIAKP--GKDRFGGYPR 132
+ +DGR I V+ ++P G + GGY +
Sbjct: 63 NGTEVDGRNIVVNESRPKEGGNSGGGYKK 91
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H L++ FS +GE+ E K++ D T +S+G+ F+ + S+ A+ +
Sbjct: 9 RCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGA 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|410340767|gb|JAA39330.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340769|gb|JAA39331.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340771|gb|JAA39332.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340773|gb|JAA39333.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340775|gb|JAA39334.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340777|gb|JAA39335.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L+ FS+FG ++EV +VKD T++S+G+ FI + + A +A+
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFPIPEHASVAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|387913868|gb|AFK10543.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V + F T E TL++ F+ +G+V+EV ++++ T++SKG F+ + + DDA AL
Sbjct: 6 KLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGLGFVTFENPDDARDALAG 65
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K +DGR I VD A
Sbjct: 66 MNGKTVDGRQIRVDHA 81
>gi|440473946|gb|ELQ42715.1| hypothetical protein OOU_Y34scaffold00194g28 [Magnaporthe oryzae
Y34]
gi|440489138|gb|ELQ68816.1| hypothetical protein OOW_P131scaffold00217g29 [Magnaporthe oryzae
P131]
Length = 182
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 50 NLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKN 109
L + T E TL+++F +G V E +VKD T +S+G+ F++YT++DDA A+ +M++
Sbjct: 9 GLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKAITAMNNVE 68
Query: 110 LDGRLIYVDIA 120
DGR I VD A
Sbjct: 69 FDGRTIRVDKA 79
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + E L++ FS+FGEV K+VKD+ T +SKG+ F++ +S + A A+E
Sbjct: 4 IYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGT 63
Query: 106 DHKNLDGRLIYVDIAKP 122
+ K + GR + V+ A+P
Sbjct: 64 NGKEVGGRALRVNEARP 80
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 50/77 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T++ +L++ FS FGE+ + K++ D T +S+G+ F+ ++S + A+E
Sbjct: 6 RCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAIEG 65
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ ++LDGR I V+ A+
Sbjct: 66 MNGQDLDGRNITVNEAQ 82
>gi|119357086|ref|YP_911730.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119354435|gb|ABL65306.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL +T E L+ FS FG+V ++ D+ + +SKG+ FI+ ++ +A A+ESM
Sbjct: 3 IYIGNLAYTVSEDDLRDAFSQFGQVDSANIINDKFSGRSKGFGFIEMSNDSEAREAIESM 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ ++L GR I V+ AKP
Sbjct: 63 NDQDLKGRTIKVNEAKP 79
>gi|255584774|ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding protein, putative [Ricinus communis]
Length = 94
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
L S++ V L T L+K FS FG V E +LV D T+K KG+ F+ + S+ A A
Sbjct: 5 LGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKA 64
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L++M+ + +DGRL++V++AK
Sbjct: 65 LKAMNGRIVDGRLLFVEVAK 84
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + L++ F FG+V E +VKD T +S+G+ F++++S DA A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMD 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+++ DGR I VD A
Sbjct: 62 AMNNQEFDGRTIRVDKA 78
>gi|324512454|gb|ADY45159.1| ELAV-like protein 1 [Ascaris suum]
Length = 477
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ +++ LP T + ++ FS+ GE+ KLV+D+IT +S GY F+ Y Q+DAL A+
Sbjct: 103 TNLIINYLPQTMSQEEVRSLFSSMGEIDSCKLVRDKITGQSLGYGFVNYVRQEDALKAVS 162
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPK 138
+++ L + I V A+P + G SG PK
Sbjct: 163 TLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLPK 198
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T + L + F FG V VK+++D T K KGY F+ +DA+ A+ ++
Sbjct: 390 IFVYNLAPETEDSILWQLFGPFGAVLSVKIIRDFATGKCKGYGFVTMGQYEDAVTAITAL 449
Query: 106 DHKNLDGRLIYV 117
+ L R + V
Sbjct: 450 NGTQLGNRTLQV 461
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 35/64 (54%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ + V LP + + L+ F +G++ +++ D IT SKG F+++ + +A +A+
Sbjct: 188 GANLYVSGLPKSMSQPELENLFRPYGQIITSRILSDNITGLSKGVGFVRFDRKGEAEVAI 247
Query: 103 ESMD 106
++
Sbjct: 248 SKLN 251
>gi|449449074|ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cucumis sativus]
Length = 261
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V N ++ L FS FG++A V ++KD T+KS+G AF+Q+ SQDDA+
Sbjct: 66 PSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 125
Query: 101 ALESMDHKNLDGRLIYVDIA 120
A + M K L+GR++ IA
Sbjct: 126 AAKQMHGKILNGRVLKAAIA 145
>gi|456864553|gb|EMF82952.1| hypothetical protein LEP1GSC188_2989 [Leptospira weilii serovar
Topaz str. LT2116]
Length = 86
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + +E TL F G V VK++ D+ + KSKG+ F++ +++D+A A++ +
Sbjct: 5 IYVGNLSYDLNEGTLGDLFRVHGTVNSVKIITDQYSGKSKGFGFVEMSNKDEADKAIKDL 64
Query: 106 DHKNLDGRLIYVDIAKPGKDRF 127
D KN+ R + V++AKP DRF
Sbjct: 65 DGKNVLTRNLKVNVAKPKNDRF 86
>gi|449435011|ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus]
gi|449435013|ref|XP_004135290.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 2
[Cucumis sativus]
Length = 89
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
L S + + L T L+ FS FG ++E +L++D T++ KG+ F+ + S +A A
Sbjct: 5 LGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKA 64
Query: 102 LESMDHKNLDGRLIYVDIAKPG 123
L++MD + +DGRLI+V+ AK G
Sbjct: 65 LKAMDGRIVDGRLIFVEFAKTG 86
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLPFT+ E L+K FS +G ++E+ D +TKK KG+AFI Y + A+ A
Sbjct: 413 SGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAY 472
Query: 103 ESMDHKNLDGRLIYV 117
MD + GR++++
Sbjct: 473 AEMDGQVFQGRMMHL 487
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 831 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAF 890
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 891 NALCHSTHLYGRRLVLEWA 909
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E +K F+AFG + + +K KD K + + FI Y S+D+A A
Sbjct: 2 SRLIVKNLPNGMKEDRFRKLFAAFGTLTDCCLKFTKD---GKFRKFGFIGYKSEDEAQAA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D + V++ K
Sbjct: 59 LNHFNRSFIDTSRVTVELCK 78
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI---TKKSKGYAFIQYTSQDDALLAL 102
+ ++NL FTT E TL++ FS G V + K + T S G+ F++Y + A AL
Sbjct: 731 LFIKNLNFTTTEGTLKETFSKVGAVKSCTISKKKDKAGTLLSMGFGFVEYKKPESAQKAL 790
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ +DG + V I++
Sbjct: 791 RRLQGCIVDGHKLEVKISE 809
>gi|407940456|ref|YP_006856097.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407898250|gb|AFU47459.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 116
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 53/81 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++S+I V NLP++ + TL+ F+ FG V+ K++ D T +SKG+ F++ + + A A
Sbjct: 1 MSSKIYVGNLPYSVTDATLESNFAEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ ++ ++DGR I V++A+P
Sbjct: 61 IRALHGMSVDGRSIVVNLARP 81
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+ ++ L++ FS FG VA +++ + T +SKG+ F++ S+ +A A
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
++ M+ + L GR + V+ A+P + R PR+ G
Sbjct: 61 IQGMNGQPLGGRSLVVNEARPMEPR---PPRSGG 91
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+ ++ L++ FS FG VA +++ + T +SKG+ F++ S+ +A A
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
++ M+ + L GR + V+ A+P + R PR+ G
Sbjct: 61 IQGMNGQPLGGRSLVVNEARPMEPR---PPRSGG 91
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ +++++ A+E
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ +++++ A+E
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ +++++ A+E
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ +++++ A+E
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|194336480|ref|YP_002018274.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308957|gb|ACF43657.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 95
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL +T E L+ FS FGEVA ++ D+ + +SKG+ F++ +A A+ESM
Sbjct: 3 IYIGNLAYTVSEDDLRDAFSEFGEVANASIINDKFSGRSKGFGFVEMPKDSEAREAIESM 62
Query: 106 DHKNLDGRLIYVDIAK 121
+ K+L+GR + V+ AK
Sbjct: 63 NGKDLNGRTVTVNEAK 78
>gi|145228995|ref|XP_001388806.1| multiple RNA-binding domain-containing protein 1 [Aspergillus niger
CBS 513.88]
gi|134054902|emb|CAK36914.1| unnamed protein product [Aspergillus niger]
gi|350638000|gb|EHA26356.1| multiple RNA-binding domain-containing protein [Aspergillus niger
ATCC 1015]
Length = 825
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 24 ENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK 83
E+ + + ++ N L++R+ VRNL + T E L+ F+ FG + E+ + D
Sbjct: 281 EDKTVQEPQVDTNIENIRLSARLFVRNLAYDTSESDLEPLFAPFGRIEEIHVAFDTRVNT 340
Query: 84 SKGYAFIQYTSQDDALLALESMDHKNLDGRLIYV 117
SKG+A+IQY D A+ A +++D K+ GRL+++
Sbjct: 341 SKGFAYIQYLDADAAVEAYKNLDGKHFQGRLMHI 374
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V+ V + + ++G+ F + S +A A++
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVR-VPQKFDRSARGFGFADFVSAREAENAMD 760
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 761 ALKNTHLLGRKLVLEFA 777
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T + LQ F+ FG + E K+V D ++ +SKG+ F++Y + ++A A + M
Sbjct: 62 LFVSGLSRLTTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAERARQEM 121
Query: 106 DHKNLDGRLIYVDIAKP 122
+ K LDG +I+VD AKP
Sbjct: 122 NAKFLDGWVIFVDPAKP 138
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L T + L++ FS FG++ E K++ D ++ +SKG+ F+ YT+ ++A A E
Sbjct: 35 KLFVSGLSRLTTDEKLKEAFSPFGQLLEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREG 94
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDG +I+VD AK
Sbjct: 95 MNAKFLDGWVIFVDPAK 111
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NL ++ + LQ+ F FG V K++ D T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+E M+ ++L GR I V+ A+P ++R
Sbjct: 61 IEGMNGQSLSGRAIVVNEARPREER 85
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T E +L F FG + +V ++KD T S+G+ F++Y + +DA A+E
Sbjct: 2 GKLFIGGLSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAME 61
Query: 104 SMDHKNLDGRLIYVDIA 120
M+ K LDGR I VD A
Sbjct: 62 GMNGKTLDGRAIRVDEA 78
>gi|449464240|ref|XP_004149837.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like isoform 1 [Cucumis sativus]
gi|449464242|ref|XP_004149838.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like isoform 2 [Cucumis sativus]
gi|449464244|ref|XP_004149839.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like isoform 3 [Cucumis sativus]
Length = 261
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V N ++ L FS FG++A V ++KD T+KS+G AF+Q+ SQDDA+
Sbjct: 66 PSKSTLYVSNFDYSLTNSDLHTLFSNFGKIAHVTVLKDRQTRKSRGVAFVQFISQDDAVK 125
Query: 101 ALESMDHKNLDGRLIYVDIA 120
A + M K L+GR++ IA
Sbjct: 126 AAKQMHGKILNGRVLKAAIA 145
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V + + T E L+ EFS +G + +++LV D++T K KGYAFI++ + D +A +
Sbjct: 100 LFVSRISYKTSESKLKNEFSQYGPIKKIRLVTDQVTGKPKGYAFIEFEKERDMKIAYKQA 159
Query: 106 DHKNLDGRLIYVDIAK 121
D + +D R + VDI +
Sbjct: 160 DGQKIDDRRVLVDIER 175
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+SR+ V L + T + +L+ FS+FGEV + K++ D T +S+G+ F+ + + A AL
Sbjct: 34 SSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSAL 93
Query: 103 ESMDHKNLDGRLIYVDIAK 121
SMD L+GR I V A+
Sbjct: 94 SSMDGVELNGRSIRVSFAQ 112
>gi|452851769|ref|YP_007493453.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
gi|451895423|emb|CCH48302.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
Length = 87
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A I V NLP+++ E ++ F A+GEV VKL+ D T + +G+ F++ Q AL A
Sbjct: 1 MAKNIYVGNLPWSSTEEDVRATFEAYGEVYSVKLINDRETGRPRGFGFVEMEDQ-GALEA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+E++D K+ GR + V+ A+P +R
Sbjct: 60 IENLDGKDFGGRNLKVNEARPRPER 84
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
Length = 87
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A I V NLP++ E ++ F FGEV VKLV D T + +G+ F++ Q AL A
Sbjct: 1 MAKNIYVGNLPWSATEEDVRAAFETFGEVISVKLVNDRETGRPRGFGFVEMDDQ-GALAA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ES+D + GR + V+ A+P +R
Sbjct: 60 IESLDGSDFGGRNLKVNEARPRPER 84
>gi|219120004|ref|XP_002180750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407466|gb|EEC47402.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 837
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
A+R+ +RNLPFT E L+ F AFG + E + D+ K+SKG+AF+ + +DA+ A
Sbjct: 320 ANRLFLRNLPFTATEDDLKTHFEAFGSIVECHVPADD-QKRSKGFAFVTFVKANDAIAAK 378
Query: 103 ESMDHKNLDGRLIYV 117
++D + GRL++V
Sbjct: 379 TALDGTDFQGRLLHV 393
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++MVRN+PF L + F +FG + +V+L K + +G+AF++Y + +A A+
Sbjct: 724 STKVMVRNVPFQATRKELLQLFGSFGPLKKVRLPK-KFDGSHRGFAFVEYMAAKEAAAAM 782
Query: 103 ESMDHKNLDGRLIYV 117
++ +L GR + +
Sbjct: 783 HTLSATHLYGRHLVL 797
>gi|260796311|ref|XP_002593148.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|260796325|ref|XP_002593155.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
gi|229278372|gb|EEN49159.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|229278379|gb|EEN49166.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
Length = 88
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+I V L T+E TL+K F+ +G++ EV L+KD+IT +S+G+ FI + + DA +A++
Sbjct: 8 GKIFVAGLNLETNETTLEKLFNKYGKIVEVLLMKDKITARSRGFGFITFENPRDAEVAVK 67
Query: 104 SMDHKNLDGRLIYVDIA 120
M+ +++ G++I VD A
Sbjct: 68 EMNGQDIAGKVIKVDRA 84
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+ ++ L++ F FG VA +++ + T +SKG+ F++ S+ +A A
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
++ M+ + L GR + V+ A+P + R PRT G
Sbjct: 61 IQGMNGQPLGGRSLVVNEARPMEPR---PPRTGG 91
>gi|320162535|ref|YP_004175760.1| RNA-binding domain-containing protein [Anaerolinea thermophila
UNI-1]
gi|319996389|dbj|BAJ65160.1| RNA-binding region [Anaerolinea thermophila UNI-1]
Length = 105
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 50/77 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NLPF+ +E L+ F+A+G V ++KD+ + +S+G+ F++ +Q +A A++ +
Sbjct: 3 IYVGNLPFSANEDDLRSAFAAYGTVTSAAVIKDQFSGQSRGFGFVEMPNQAEAEAAIQGL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ K L GR + V+ A+P
Sbjct: 63 NGKELKGRALRVNEARP 79
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ +++++ A+E
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ + V L T LQ+ FS FGEV + ++V D ++ SKG+ F++Y + +DA ++
Sbjct: 55 TNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIK 114
Query: 104 SMDHKNLDGRLIYVDIAKP 122
MD + LDG +I+ + A+P
Sbjct: 115 GMDGQFLDGWVIFAEYARP 133
>gi|268529184|ref|XP_002629718.1| C. briggsae CBR-EXC-7 protein [Caenorhabditis briggsae]
Length = 456
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ +++ LP + ++ F++ GE+ KLV+D++T +S GY F+ Y ++DAL A+
Sbjct: 45 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 104
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
S + L + I V A+P D+ G SG PK L E + +
Sbjct: 105 SFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELEGI 150
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL T + L + FS FG + VK+++D I++K KGYAF+ ++ +A A+ S+
Sbjct: 376 LFVYNLAADTDDTLLWQLFSQFGAILNVKILRD-ISQKCKGYAFVSMSTYTEAYNAMVSL 434
Query: 106 DHKNLDGRLIYV 117
+ NL G+ + V
Sbjct: 435 NGTNLAGKPLQV 446
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
S + V +P + H L+ F FG++ +++ D +T SKG F+++ +D+A A+
Sbjct: 130 GSNLYVSGIPKSMTLHELEGIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADTAI 189
Query: 103 ESMD 106
++++
Sbjct: 190 KTLN 193
>gi|341901304|gb|EGT57239.1| CBN-EXC-7 protein [Caenorhabditis brenneri]
Length = 459
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ +++ LP + ++ F++ GE+ KLV+D++T +S GY F+ Y + DAL A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVQEADALRAVS 101
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
S + L + I V A+P D+ G SG PK L E + +
Sbjct: 102 SFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESI 147
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL T + L + FS FG + VK+++D +T+K KGYAF+ ++ +A A+ S+
Sbjct: 379 LFVYNLAADTDDTLLWQLFSQFGAILNVKILRD-LTQKCKGYAFVSMSTYTEAYNAMVSL 437
Query: 106 DHKNLDGRLIYV 117
+ NL G+ + V
Sbjct: 438 NGTNLAGKTLQV 449
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
S + V +P + H L+ F FG++ +++ D +T SKG F+++ +D+A +A+
Sbjct: 127 GSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186
Query: 103 ESMD 106
++++
Sbjct: 187 KTLN 190
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
D LDGR + V +A+ G+ + R PP++
Sbjct: 76 DGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>gi|354502961|ref|XP_003513550.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cricetulus griseus]
Length = 216
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T++SKG AFI + +D AL
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSALN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + L++ FSAFGE+ E K++ D T +S+G+ F+ + + A+E
Sbjct: 9 RCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|223039621|ref|ZP_03609908.1| RNA-binding region RNP-1 [Campylobacter rectus RM3267]
gi|222879192|gb|EEF14286.1| RNA-binding region RNP-1 [Campylobacter rectus RM3267]
Length = 81
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + E L+ F+ FGEV K+VKD T +SKG+ F++ + DAL A+E++
Sbjct: 3 IYVGNLSYRMTEAELKDTFAPFGEVKRAKIVKDRDTNRSKGFGFVEMENDADALKAIEAL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
++K + GR + V+ +KP
Sbjct: 63 NNKEVGGRALRVNESKP 79
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLPFT+ E L+K FS +G ++E+ D +TKK KG+AFI Y + A+ A
Sbjct: 77 SGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAY 136
Query: 103 ESMDHKNLDGRLIYV 117
MD + GR++++
Sbjct: 137 AEMDGQVFQGRMMHL 151
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 495 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAF 554
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 555 NALCHSTHLYGRRLVLEWA 573
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDE---ITKKSKGYAFIQYTSQDDALLAL 102
+ ++NL FTT E TL++ FS G V + K + T S G+ F++Y + A AL
Sbjct: 395 LFIKNLNFTTTEGTLKETFSKVGAVKSCTISKKKDKAGTLLSMGFGFVEYKKPESAQKAL 454
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ +DG + V I++
Sbjct: 455 RRLQGCIVDGHKLEVKISE 473
>gi|15639347|ref|NP_218796.1| RNA-binding protein, [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025589|ref|YP_001933361.1| RNA-binding protein [Treponema pallidum subsp. pallidum SS14]
gi|408502236|ref|YP_006869680.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|3322634|gb|AAC65342.1| RNA-binding protein, putative [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018164|gb|ACD70782.1| possible RNA-binding protein [Treponema pallidum subsp. pallidum
SS14]
gi|408475599|gb|AFU66364.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 105
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++++I V NL + T E L FS FGEV V ++KD++T++SKG+ F++ S + A L
Sbjct: 17 MSAKIYVGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELV 76
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRF 127
+ ++ K +GR + V+ A+ K RF
Sbjct: 77 INELNEKEFEGRRLRVNYAEE-KPRF 101
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 49/75 (65%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T+E +L F +G + +V +++D+ T +S+G+ F++Y + +DA AL+
Sbjct: 5 GKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALD 64
Query: 104 SMDHKNLDGRLIYVD 118
+M+ K LDGR I VD
Sbjct: 65 AMNGKTLDGRAIRVD 79
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R + NL ++T + +L+ FS FG + E K+V D+ + +S+G+ F+ + + A+E
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 105 MDHKNLDGRLIYVDIAK---PGKDRFG 128
M+ +LDGR I VD A+ PG+DR G
Sbjct: 68 MNGLDLDGRNITVDKAQPQGPGRDRNG 94
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 37 LSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQD 96
+S+ P ++++ + + ++T E +L++ FS +GEV + +++ D T +S+G+ FI YTS +
Sbjct: 36 MSSAP-STKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVE 94
Query: 97 DALLALESMDHKNLDGRLIYVDIAK 121
+A A++++D ++L GR I V+ A
Sbjct: 95 EASSAIQALDGQDLHGRPIRVNYAN 119
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ +RNLP+T E LQ FS G +AEV D +TKK KGYAF+ Y ++A+ AL
Sbjct: 387 SGRLFIRNLPYTCTEEELQDLFSKHGPLAEVVFPIDNLTKKPKGYAFVSYMIPENAVTAL 446
Query: 103 ESMDHKNLDGRLIYV 117
+D GR++++
Sbjct: 447 AQLDGHIFQGRMLHL 461
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI---TKKSKGYAFIQYTSQDDAL 99
+S+I+VRN+PF +++ F FGE+ V+L K T +G+ F+ + ++ DA
Sbjct: 786 SSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKASGTGTGPHRGFGFVDFLTKQDAK 845
Query: 100 LALESMDHK-NLDGRLIYVDIA 120
A ++ H +L GR + ++ A
Sbjct: 846 KAFSALCHSTHLYGRRLVLEWA 867
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK--GYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + L + TK+ K + F+ + +++ A A
Sbjct: 2 SRLIVKNLPNGMKEERFKEMFAAFGTLTDCGL---KFTKEGKFRKFGFVGFKTEEHADKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L+ + +D + V++ K
Sbjct: 59 LKHFNKSFVDTSRVTVEMCK 78
>gi|399031232|ref|ZP_10731328.1| RRM domain-containing RNA-binding protein [Flavobacterium sp.
CF136]
gi|398070499|gb|EJL61796.1| RRM domain-containing RNA-binding protein [Flavobacterium sp.
CF136]
Length = 119
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 50/77 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V +LPF+ E L++ F A+G V VK++ D+ T +SKG+ F++ T+ D+A A++ +
Sbjct: 3 IFVGSLPFSIEEADLRESFEAYGAVDSVKIITDKFTGRSKGFGFVEMTNDDEAQKAIDEL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ + GR I V+ ++P
Sbjct: 63 NGATVQGRAIVVNKSEP 79
>gi|381186866|ref|ZP_09894434.1| RNA-binding region RNP-1 [Flavobacterium frigoris PS1]
gi|379651172|gb|EIA09739.1| RNA-binding region RNP-1 [Flavobacterium frigoris PS1]
Length = 120
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 50/77 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V +LPF+ E L++ F A+G V VK++ D+ T +SKG+ F++ T+ D+A A++ +
Sbjct: 3 IFVGSLPFSIEEADLRESFEAYGAVDSVKIITDKFTGRSKGFGFVEMTNDDEAQKAIDEL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ + GR I V+ ++P
Sbjct: 63 NGATVQGRAIVVNKSEP 79
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ + L + + L++ FS+FGEV E +++ D T +S+G+ F+ Y+ D A A
Sbjct: 35 MSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEA 94
Query: 102 LESMDHKNLDGRLIYVDIA--KPGKDR 126
+ +MD K +DGR + V++A +P +R
Sbjct: 95 ISAMDGKEIDGRQVRVNMANERPAGNR 121
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S + V NL F+ + FS FG+VA V ++KD T++S+G AF+ Y S++DA A
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 104 SMDHKNLDGRLIYVDIA 120
SMD K L+GR + V IA
Sbjct: 117 SMDAKILNGRKLTVSIA 133
>gi|388501618|gb|AFK38875.1| unknown [Medicago truncatula]
Length = 277
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S I V NL ++ L FS FG +A V ++KD T+ S+G AFIQ+ S+ DA +
Sbjct: 65 PSKSTIYVSNLDYSLTNSDLHTLFSTFGRIARVTVLKDRHTRLSRGVAFIQFVSRHDAQI 124
Query: 101 ALESMDHKNLDGRLIYVDIA 120
A+ M+ K L+GR + IA
Sbjct: 125 AVTEMNKKILNGRTLSASIA 144
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ V NLPF E+ L++ F +G+V E+ L+ D++T +S+G+AF+ S A A+
Sbjct: 47 TRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQSAIN 106
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
+++ ++ GR I V+ AKP ++R + SG ++
Sbjct: 107 NLNGSSVSGRQIVVNEAKPREERPHRHRENSGRSRR 142
>gi|255322500|ref|ZP_05363645.1| RNA-binding region RNP-1 [Campylobacter showae RM3277]
gi|255300408|gb|EET79680.1| RNA-binding region RNP-1 [Campylobacter showae RM3277]
Length = 81
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + E L+ F+ FGEV K+VKD T +SKG+ F++ + DAL A+E++
Sbjct: 3 IYVGNLSYRMTEAELKDTFAPFGEVKRAKIVKDRDTNRSKGFGFVEIENDADALKAIEAL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
++K + GR + V+ +KP
Sbjct: 63 NNKEVGGRALRVNESKP 79
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 37 LSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQD 96
+S P ++ V NL +TT +L+ F FG+V + +++D T +S+G+ FI + +
Sbjct: 1 MSAAPAGGKLFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEA 60
Query: 97 DALLALESMDHKNLDGRLIYVDIAK 121
DA A+E+++ + LDGR I V+ A
Sbjct: 61 DAPGAIEALNGQELDGREIRVNYAN 85
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ + +L ++ + +L+ F FG V + K+V D +++SKG+ F+ + +DA A+E
Sbjct: 2 TRLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIE 61
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M+ + L+GR I VD++KP
Sbjct: 62 EMNEQELEGRRIKVDVSKP 80
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
D LDGR + V +A+ G+ + R PP++
Sbjct: 76 DGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + L++ FSA+GEV E K++ D T +S+G+ F+ + ++ A+E
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + L++ FSA+GEV E K++ D T +S+G+ F+ + ++ A+E
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + L + T++ +L+ FS FG+V +++ D T +S+G+ F+ ++S D A AL
Sbjct: 35 SSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSAL 94
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRT 133
+MD + L GR I V A R GG PR+
Sbjct: 95 SAMDGQELHGRNIRVSYATERAPRPGG-PRS 124
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 54/80 (67%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++SR+ V L + T + +L++ F++FG+V + K++ D + +S+G+ F+ ++ +D A A
Sbjct: 37 MSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEA 96
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+ +MD + L GR I V++A+
Sbjct: 97 MNAMDGQQLHGRNIRVNLAQ 116
>gi|338706322|ref|YP_004673090.1| putative RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|378972859|ref|YP_005221463.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378973926|ref|YP_005222532.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378974988|ref|YP_005223596.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
gi|378981835|ref|YP_005230140.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384421880|ref|YP_005631239.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059746|gb|ADD72481.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|335344383|gb|AEH40299.1| probable RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|374677182|gb|AEZ57475.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|374678252|gb|AEZ58544.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|374679321|gb|AEZ59612.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|374680386|gb|AEZ60676.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
Length = 89
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++++I V NL + T E L FS FGEV V ++KD++T++SKG+ F++ S + A L
Sbjct: 1 MSAKIYVGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELV 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRF 127
+ ++ K +GR + V+ A+ K RF
Sbjct: 61 INELNEKEFEGRRLRVNYAEE-KPRF 85
>gi|308464232|ref|XP_003094384.1| CRE-EXC-7 protein [Caenorhabditis remanei]
gi|308247806|gb|EFO91758.1| CRE-EXC-7 protein [Caenorhabditis remanei]
Length = 457
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ +++ LP + ++ F++ GE+ KLV+D++T +S GY F+ Y + DAL A+
Sbjct: 44 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVQEADALRAVS 103
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSEQDEV 148
S + L + I V A+P D+ G SG PK L E + +
Sbjct: 104 SFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESI 149
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL T + L + FS FG + VK+++D +T+K KGYAF+ ++ +A A+ S+
Sbjct: 377 LFVYNLAADTDDTLLWQLFSQFGAILNVKILRD-LTQKCKGYAFVSMSTYTEAYNAMVSL 435
Query: 106 DHKNLDGRLIYV 117
+ NL G+ + V
Sbjct: 436 NGTNLAGKTLQV 447
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
S + V +P + H L+ F FG++ +++ D +T SKG F+++ +D+A A+
Sbjct: 129 GSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADNAI 188
Query: 103 ESMD 106
++++
Sbjct: 189 KTLN 192
>gi|124248380|gb|ABM92810.1| IP15810p [Drosophila melanogaster]
Length = 647
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 313 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 372
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSE 144
+++ L + I V IA+P + G SG PK S+
Sbjct: 373 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSD 414
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 566 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 625
Query: 106 DHKNLDGRLIYV 117
+ L R++ V
Sbjct: 626 NGYTLGNRVLQV 637
>gi|358391693|gb|EHK41097.1| hypothetical protein TRIATDRAFT_301780 [Trichoderma atroviride IMI
206040]
Length = 171
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E TL+++F FG V E +VKD T +S+G+ F+++ + DA A++
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRFVQEADAQAAID 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|195342135|ref|XP_002037657.1| GM18380 [Drosophila sechellia]
gi|194132507|gb|EDW54075.1| GM18380 [Drosophila sechellia]
Length = 650
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 316 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 375
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSE 144
+++ L + I V IA+P + G SG PK S+
Sbjct: 376 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSD 417
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 569 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 628
Query: 106 DHKNLDGRLIYV 117
+ L R++ V
Sbjct: 629 NGYTLGNRVLQV 640
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R + NL ++T + +L+ FS FG + E K+V D+ + +S+G+ F+ + + A+E
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 105 MDHKNLDGRLIYVDIAK---PGKDRFG 128
M+ +LDGR I VD A+ PG+DR G
Sbjct: 68 MNGLDLDGRNITVDKAQPQGPGRDRNG 94
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + L + + +L+ FS FG+V + K++ D + +S+G+ F+ +++ + A AL
Sbjct: 35 SSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSAL 94
Query: 103 ESMDHKNLDGRLIYVDIA 120
+MD K+LDGR I V A
Sbjct: 95 SAMDGKDLDGRSIRVSYA 112
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
D LDGR + V +A+ G+ + R PP++
Sbjct: 76 DGAVLDGRELRVQMARYGRPPDSHHGRRGPPPRR 109
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T+ TL+ F+ FG+V + K++ D T +S+G+ F+ ++S+ L A+E+
Sbjct: 9 RCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|302926643|ref|XP_003054335.1| hypothetical protein NECHADRAFT_74951 [Nectria haematococca mpVI
77-13-4]
gi|256735276|gb|EEU48622.1| hypothetical protein NECHADRAFT_74951 [Nectria haematococca mpVI
77-13-4]
Length = 178
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 47 MVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMD 106
V++ + T E TL+++F FG V E +VKD T +S+G+ F++YT + DA A+ +M+
Sbjct: 8 FVKSPSWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIATMN 67
Query: 107 HKNLDGRLIYVDIA 120
+ DGR I VD A
Sbjct: 68 NVEFDGRTIRVDKA 81
>gi|121604834|ref|YP_982163.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120593803|gb|ABM37242.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 132
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+T + LQ+ F FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ M+ ++L GR I V+ A+P
Sbjct: 61 IAGMNGQSLGGRSITVNEARP 81
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 53/80 (66%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+++ V NL + T + +L FSAFG++ + ++KD T +S+G+ F+ + +Q +A A
Sbjct: 1 MAAKVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAA 60
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+ +++ + LDGR I V++A
Sbjct: 61 IAALNEQELDGRRIRVNMAN 80
>gi|327279532|ref|XP_003224510.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Anolis
carolinensis]
Length = 152
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L++ FS+FG ++EV ++KD+ T++S+G+ FI + + + A A+
Sbjct: 6 GKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ +++DGR I VD A
Sbjct: 66 AMNGESVDGRQIRVDHA 82
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + + L+ F +GEV+ K++ D+ + +SKG+ F++ Q+DA A++ M
Sbjct: 3 IYVGNLSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMARQEDAETAIKEM 62
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQ 140
+ +L GR I V+ A+P R G+ R+ G +Q
Sbjct: 63 NDSDLKGRQIVVNQARP---RNEGFRRSEGFGDRQ 94
>gi|260787130|ref|XP_002588608.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
gi|229273773|gb|EEN44619.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
Length = 130
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L + T E +L + FS FG V E K+++D T +S+G+ F+++++ +A +A +
Sbjct: 1 KLFVVGLSWGTSEASLCQAFSRFGTVTECKVIRDHWTGRSRGFGFVKFSAPSEADVARKD 60
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFG 128
M ++LDGR I VD AK RFG
Sbjct: 61 MHFQHLDGRTIRVDYAKY---RFG 81
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T ++ LQ+ FS +GE+ + K++ D T +S+G+ F+ + S++ A+E
Sbjct: 7 RCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 67 MNGKELDGRNITVNEAQS 84
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L + T E +++EF ++G + V+L+ D++T K KGYAFI+Y + D A +
Sbjct: 140 LFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQA 199
Query: 106 DHKNLDGRLIYVDIAK 121
D + +DGR + VD+ +
Sbjct: 200 DGRKIDGRRVLVDVER 215
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
D LDGR + V +A+ G+ + R PP++
Sbjct: 76 DGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
NR +P NL +S ++ V +L F E +++ F FGE+ V L +D +T
Sbjct: 376 NRLHPGDGNLNLPPGVSAPHGGMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVT 435
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVD 118
+SKGYAF+QY +DA +ALE MD L GR + V+
Sbjct: 436 GRSKGYAFVQYKRAEDAKMALEQMDGFELAGRTLRVN 472
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R +V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+
Sbjct: 47 RCVVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 106
Query: 105 MDHKNLDGRLIYVDIAKPG 123
MD + LDGR + V +A+ G
Sbjct: 107 MDGRMLDGRELRVQMARYG 125
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
SN LA RI V +L F E ++ FS FG V V L KD +T++SKG+AF++Y D
Sbjct: 245 SNQQLACRIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDA 304
Query: 98 ALLALESMDHKNLDGRLIYV 117
A AL+ M+ L GR + V
Sbjct: 305 ATAALKHMNGFMLAGRQLKV 324
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++RI V ++ + ++ F AFG V L+ + T K KGY F++Y A A+
Sbjct: 410 SNRIYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAI 469
Query: 103 ESMDHKNLDGRLIYVDIA 120
+ M+ +L GR I V A
Sbjct: 470 QQMNGWDLGGRPIKVGRA 487
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
D LDGR + V +A+ G+ + R PP++
Sbjct: 76 DGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS FGE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 51/78 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S+I + + F T ++ L++ F +G V E +++ D T +S+G+ F+ YTS ++A A+
Sbjct: 39 SSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAI 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
++MD ++L GR + V+ A
Sbjct: 99 QAMDGQDLHGRRVRVNYA 116
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%)
Query: 39 NYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDA 98
NY A+R+ V NLP+ + +L++ FS G+V E K+V D T +S+G+ F+ +S +
Sbjct: 211 NYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEI 270
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
A+ S+D ++DGR I V +A+
Sbjct: 271 EEAISSLDGSDMDGRQIKVTLAE 293
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V NLP++ L + F G+V V+++ D T +S+G+AF+ +Q DA A+E
Sbjct: 114 KVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEK 173
Query: 105 MDHKNLDGRLIYVDIA-KPGKDRF---GGY 130
+ GR + V+ P KD F GG+
Sbjct: 174 FNGYEYQGRTLRVNSGPPPPKDSFAPRGGF 203
>gi|78707789|gb|ABB46764.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|78707790|gb|ABB46765.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694736|dbj|BAG89927.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 438
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + + LP T E L + AFGE++EV+L+KD+ TK++KG+AF+ +T +D A
Sbjct: 106 PQGSEVFIGGLPRDTTEDDLHELCEAFGEISEVRLMKDKETKENKGFAFVTFTGKDGAQR 165
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+E + K GR + +++
Sbjct: 166 AIEDLHDKEHKGRTLRCSLSQ 186
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V+NLP + +++ F GEV +V L + K + + F+ + + AL A++
Sbjct: 289 IYVKNLPENASKEKIKEIFEIHGEVTKVVLPPAKAGNK-RDFGFVHFAERSSALKAVKGS 347
Query: 106 DHKNLDGRLIYVDIAKPGKDRF-------GGYPRTSGPP 137
+ +DG+++ V +AKP D+ GG P PP
Sbjct: 348 EKYEIDGQVLEVSMAKPLGDKKPDHSFKPGGAPNFPLPP 386
>gi|218184150|gb|EEC66577.1| hypothetical protein OsI_32766 [Oryza sativa Indica Group]
Length = 496
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + + LP T E L + AFGE++EV+L+KD+ TK++KG+AF+ +T +D A
Sbjct: 106 PQGSEVFIGGLPRDTTEDDLHELCEAFGEISEVRLMKDKETKENKGFAFVTFTGKDGAQH 165
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+E + K GR + +++
Sbjct: 166 AIEDLHDKEHKGRTLRCSLSQ 186
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V+NLP + +++ F GEV +V L + K + + F+ + + AL A++
Sbjct: 289 IYVKNLPENASKEKIKEIFEIHGEVTKVVLPPAKAGNK-RDFGFVHFAERSSALKAVKGN 347
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ +DG+++ V +AKP D+
Sbjct: 348 EKYEIDGQVLEVSMAKPLGDK 368
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 181
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L + T E TL+++F FG V E +VKD T +S+G+ F++Y + DA A+
Sbjct: 2 AKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYNQEADAQSAIA 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 16 FANSLTN--RENPCFRTFNLRASLSNYPL---ASRIMVRNLPFTTHEHTLQKEFSAFGEV 70
F N + N R+ T AS+ NY +S++ + L + + +L+ FS FG+V
Sbjct: 3 FCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDV 62
Query: 71 AEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
+ K++ D + +S+G+ F+ +++ + A AL +MD K+L+GR I V A
Sbjct: 63 VDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYA 112
>gi|449516497|ref|XP_004165283.1| PREDICTED: glycine-rich RNA-binding protein 2-like, partial
[Cucumis sativus]
Length = 100
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%)
Query: 55 THEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRL 114
T + L++ FS+FG++A+ K+V D T +SKG+AF+ Y++ D+A A E M+ K LDG +
Sbjct: 5 TTDEKLREAFSSFGQLADAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWV 64
Query: 115 IYVDIAK 121
I+VD AK
Sbjct: 65 IFVDPAK 71
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V L T TL++ F FGEV ++V D ++ SKG+ F++Y + +DA +
Sbjct: 50 STNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGI 109
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
E MD K L+G +I+ + A+P
Sbjct: 110 EGMDGKFLEGWVIFAEYARP 129
>gi|359684840|ref|ZP_09254841.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|410451229|ref|ZP_11305247.1| hypothetical protein LEP1GSC068_3411 [Leptospira sp. Fiocruz
LV3954]
gi|418745408|ref|ZP_13301748.1| hypothetical protein LEP1GSC163_2960 [Leptospira santarosai str.
CBC379]
gi|418753643|ref|ZP_13309885.1| hypothetical protein LEP1GSC179_2849 [Leptospira santarosai str.
MOR084]
gi|421111541|ref|ZP_15572017.1| hypothetical protein LEP1GSC071_2776 [Leptospira santarosai str.
JET]
gi|422002647|ref|ZP_16349883.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|409965914|gb|EKO33769.1| hypothetical protein LEP1GSC179_2849 [Leptospira santarosai str.
MOR084]
gi|410015006|gb|EKO77120.1| hypothetical protein LEP1GSC068_3411 [Leptospira sp. Fiocruz
LV3954]
gi|410793870|gb|EKR91785.1| hypothetical protein LEP1GSC163_2960 [Leptospira santarosai str.
CBC379]
gi|410803151|gb|EKS09293.1| hypothetical protein LEP1GSC071_2776 [Leptospira santarosai str.
JET]
gi|417258738|gb|EKT88124.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|456873569|gb|EMF88944.1| hypothetical protein LEP1GSC005_1605 [Leptospira santarosai str.
ST188]
Length = 86
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + +E TL F G V VK+V D+ + KSKG+ F++ ++D+A A++ +
Sbjct: 5 IYVGNLSYDLNEGTLGDLFRVHGTVNSVKIVTDQYSGKSKGFGFVEMPNKDEADKAIKDL 64
Query: 106 DHKNLDGRLIYVDIAKPGKDRF 127
D KN+ R + V++AKP DRF
Sbjct: 65 DGKNVLTRNLKVNVAKPKNDRF 86
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T +E L+K FS +G ++E+ D +TKK KG+AF+ + + A+ A
Sbjct: 385 SGRLFVRNLPYTCNEDDLEKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFLITEHAVKAY 444
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFG-GYPRTSGPPKQQPLSEQ 145
+D + GR+++V + KD SG KQ+ L ++
Sbjct: 445 AEVDGQIFQGRMLHVLPSAAKKDEVNESEGEASGYKKQKALKDK 488
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSLKYTKD---GKFRKFGFIGFVSEEEAKAA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D + V+ K
Sbjct: 59 LGHFNKSFIDTSRVSVEFCK 78
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S + V NL F+ + FS FG+VA V ++KD T++S+G AF+ Y S++DA A
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 104 SMDHKNLDGRLIYVDIA 120
SMD K L+GR + V IA
Sbjct: 117 SMDAKILNGRKLTVSIA 133
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ + V L T LQ+ FS FGEV + K+V D + SKG+ F++Y + +DA ++
Sbjct: 54 TNLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIK 113
Query: 104 SMDHKNLDGRLIYVDIAKP 122
MD + LDG +I+ + A+P
Sbjct: 114 GMDGQFLDGWVIFAEYARP 132
>gi|345870533|ref|ZP_08822485.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921736|gb|EGV32449.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 92
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI V NLP++ + L+ FS FGE+A +++KD+ + +SKG+ F+ S DA A+++
Sbjct: 2 RIYVGNLPYSVTDDDLRTIFSEFGELAAAEVIKDKFSGQSKGFGFVDMPSNSDADAAIKA 61
Query: 105 MDHKNLDGRLIYVDIAKPGKDR 126
++ ++ GR + V+ A+P +R
Sbjct: 62 LNESDMKGRKLTVNEARPRAER 83
>gi|115481176|ref|NP_001064181.1| Os10g0151800 [Oryza sativa Japonica Group]
gi|18425248|gb|AAL69426.1|AC098565_8 Putative RNA-binding protein [Oryza sativa]
gi|31430199|gb|AAP52145.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638790|dbj|BAF26095.1| Os10g0151800 [Oryza sativa Japonica Group]
gi|125574047|gb|EAZ15331.1| hypothetical protein OsJ_30749 [Oryza sativa Japonica Group]
Length = 472
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + + LP T E L + AFGE++EV+L+KD+ TK++KG+AF+ +T +D A
Sbjct: 106 PQGSEVFIGGLPRDTTEDDLHELCEAFGEISEVRLMKDKETKENKGFAFVTFTGKDGAQR 165
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+E + K GR + +++
Sbjct: 166 AIEDLHDKEHKGRTLRCSLSQ 186
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V+NLP + +++ F GEV +V L + K + + F+ + + AL A++
Sbjct: 289 IYVKNLPENASKEKIKEIFEIHGEVTKVVLPPAKAGNK-RDFGFVHFAERSSALKAVKGS 347
Query: 106 DHKNLDGRLIYVDIAKPGKDRF-------GGYPRTSGPP 137
+ +DG+++ V +AKP D+ GG P PP
Sbjct: 348 EKYEIDGQVLEVSMAKPLGDKKPDHSFKPGGAPNFPLPP 386
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS FGE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|327279534|ref|XP_003224511.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Anolis
carolinensis]
Length = 231
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T E L++ FS+FG ++EV ++KD+ T++S+G+ FI + + + A A+
Sbjct: 85 GKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDAMR 144
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ +++DGR I VD A
Sbjct: 145 AMNGESVDGRQIRVDHA 161
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
D LDGR + V +A+ G+ Y R P ++
Sbjct: 76 DGALLDGRELRVQMARYGRPPDSMYSRRGAPQRR 109
>gi|351713220|gb|EHB16139.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Heterocephalus glaber]
Length = 264
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 118 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 177
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 178 CTRAINNKQLFGRVIKASIA 197
>gi|317154439|ref|YP_004122487.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944690|gb|ADU63741.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NLP++ E ++ F A+GEV VKL++D T + +G+ F++ AL A
Sbjct: 1 MSKNIYVGNLPWSATEDEIRAAFGAYGEVTSVKLIEDRETGRPRGFGFVEMDDA-GALEA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+E++D K+ GR I V+ AKP +R
Sbjct: 60 IENLDGKDFGGRNIKVNEAKPRAER 84
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 50/79 (63%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + L + + +L+ F+++GEV E +++ D T +S+G+ F+ +TS + A AL
Sbjct: 35 SSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSAL 94
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+MD ++L+GR I V A
Sbjct: 95 SAMDGQDLNGRNIRVSYAN 113
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + LQ FS+FGE+ + K++ D T +S+G+ F+ + S+ A+E
Sbjct: 7 RCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIEG 66
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K+LDGR I V+ A+
Sbjct: 67 MNGKDLDGRNITVNEAQS 84
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V L T L+ F+ FGEVA+ K+V D ++ SKG+ F++Y + +D+ +
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
MD K LDG +I+ + A+P
Sbjct: 115 AGMDGKFLDGWVIFAEYARP 134
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A +I V NL ++T E +LQ F +G+V V ++ D T +SKG+ F++ D A A
Sbjct: 1 MAKKIYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ ++D +LDGR + V+ AK + R
Sbjct: 61 ISALDGTSLDGRELRVNEAKERERR 85
>gi|319762031|ref|YP_004125968.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330826150|ref|YP_004389453.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317116592|gb|ADU99080.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329311522|gb|AEB85937.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 102
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +R+ V NL ++ + +L ++FS FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MNNRLYVGNLAYSVRDESLVQQFSQFGAVTSAKVMMERDTGRSKGFGFVEMASGAEAQEA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR--FGG 129
+ + K++DGR + V++A+P + R FGG
Sbjct: 61 INGLHGKSVDGRALTVNVARPMEARPSFGG 90
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V L T L+ F+ FGEVA+ K+V D ++ SKG+ F++Y + +D+ +
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
MD K LDG +I+ + A+P
Sbjct: 115 AGMDGKFLDGWVIFAEYARP 134
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%)
Query: 16 FANSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKL 75
F L + ++P + L++ + ++ + L T + L + FS FG++ E K+
Sbjct: 7 FHRLLRHSQSPLVSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQLLEAKV 66
Query: 76 VKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDR 126
+ D + +SKG+AF+ Y++ ++A A E M+ K LDG +I+VD AKP + R
Sbjct: 67 ITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPR 117
>gi|380490988|emb|CCF35636.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 856
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
+L+ +SR+ VRNLPF+ +E L+ F +GE+ EV L + SKG+A +Q+T+
Sbjct: 319 GTLATIKRSSRLFVRNLPFSANEEDLRAHFEHYGELQEVHL-PVTVGGASKGFAMVQFTN 377
Query: 95 QDDALLALESMDHKNLDGRLIYVDIAKPGKD 125
+ A+ A +S D + GRL++V A+ +D
Sbjct: 378 AESAVAAFQSTDGQTFQGRLLHVLPAEVKRD 408
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F +G++ V+L K + ++G+AF ++ + +A AL
Sbjct: 731 TKIVIKNLPFEVTKKDIRTLFGTYGQLRAVRLPK-KFGNTTRGFAFAEFVAPREAENALN 789
Query: 104 SMDHKNLDGRLIYVD 118
++ +L GR + +D
Sbjct: 790 ALRDTHLLGRRLVLD 804
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK-----SKGYAFIQYTSQD 96
+ + + VRNL F+T L + F ++ KK S G+ F+ + +++
Sbjct: 624 VTTSLFVRNLNFSTTTEKLAETFKPLDGFVSARVKTKMDPKKPGQVLSMGFGFVVFKTKE 683
Query: 97 DALLALESMDHKNLDGRLIYVDIAKPGKD 125
A AL++MD L+G + V + G+D
Sbjct: 684 QAQAALQAMDGFVLEGHTLAVKASHKGQD 712
>gi|297826049|ref|XP_002880907.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326746|gb|EFH57166.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 55/83 (66%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+S + V+ + F++ E TL + FS +G+V V ++ D+I + KG A++ ++S+++A A
Sbjct: 19 FSSTLFVKGISFSSTEETLTQAFSQYGQVLRVDVIMDKIRCRPKGIAYVTFSSKEEAGKA 78
Query: 102 LESMDHKNLDGRLIYVDIAKPGK 124
L ++ + +DGR++ +DI K GK
Sbjct: 79 LLELNGRLVDGRVVILDITKAGK 101
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F +G+V +V + +D T++S+G+AF+++ + DA AL+SM
Sbjct: 16 LKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDALDSM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
D +DGR + V +A+ G+ P GPP++
Sbjct: 76 DGAIMDGRELRVQMARYGR---PTEPYRRGPPRR 106
>gi|224097630|ref|XP_002311019.1| predicted protein [Populus trichocarpa]
gi|222850839|gb|EEE88386.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%)
Query: 47 MVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMD 106
+ L F T E TL+ F FGE+ EVK++ D+I+K+SKGYAF++YT+++ A AL+ M+
Sbjct: 269 ITAGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKEMN 328
Query: 107 HK 108
K
Sbjct: 329 GK 330
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L +TT E +L+ FS +GE+ + K++ D T +S+G+ FI Y +++ A A+
Sbjct: 30 SSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAI 89
Query: 103 ESMDHKNLDGRLIYVDIA 120
++D K+L GR + V A
Sbjct: 90 MALDGKDLHGRNLRVSAA 107
>gi|195576197|ref|XP_002077963.1| GD23195 [Drosophila simulans]
gi|194189972|gb|EDX03548.1| GD23195 [Drosophila simulans]
Length = 464
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 315 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 374
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGG 129
+++ L + I V IA+P + G
Sbjct: 375 ALNGLRLQNKTIKVSIARPSSESIKG 400
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNL +TT E L F +GEV +V L+ D+ T +SKGY ++ +T ++A A+
Sbjct: 226 RLFVRNLAYTTSEEELASLFGQYGEVVQVHLICDKETNRSKGYGYVGFTLPEEATRAMTE 285
Query: 105 MDHKNLDGRLIYVDIAK 121
+D+ GRL++V AK
Sbjct: 286 LDNSIFQGRLLHVLPAK 302
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S+++VRN+ F L++ FS FG+V +VKL K + +G+AF+++ ++ +A A
Sbjct: 625 SSKLIVRNVAFEATRKDLKQLFSPFGQVKKVKLPK-KFDGNHRGFAFVEFVTKQEAQNAF 683
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
E++ +L GR + ++ A+ G+
Sbjct: 684 EALGSSHLYGRHLVLEWAREGE 705
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+SR+ V+NLP + L++ F A G+V + K+++ KS+ + F+ + SQ++A A+
Sbjct: 4 SSRVCVKNLPTYVTDDKLREHFGAKGQVTDAKVMRTR-DGKSRRFGFVGFYSQEEAESAV 62
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
+ LD + ++A+ D
Sbjct: 63 AYFNRSFLDTSRLVCEVARSVGD 85
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK--------SKGYAFIQYTS 94
+S + V+NL F T + +L+K F G V L + +K S G+ F+++ S
Sbjct: 525 SSTVFVKNLNFKTTDASLRKHFE--GRVKAGSLRTATVKRKPSKTGASLSMGFGFVEFDS 582
Query: 95 QDDALLALESMDHKNLDGRLIYVDIAKPGKD 125
D A + M LDG + + ++ G D
Sbjct: 583 ADTAERVCKEMQGSVLDGHALVLQPSRAGDD 613
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPK 138
D LDGR + V +A+ G+ + R PP+
Sbjct: 76 DGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>gi|169771029|ref|XP_001819984.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
oryzae RIB40]
gi|83767843|dbj|BAE57982.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 825
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
++ N +++R+ VRNL + T E L+ F+ FG + E+ + D SKG+A++QY
Sbjct: 294 NIENIRISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSSSKGFAYVQYVES 353
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A +++D K+ GRL+++
Sbjct: 354 DAAVEAYKALDGKHFQGRLLHI 375
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 703 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 761
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 762 ALKNTHLLGRKLVLEFA 778
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++ V NL + T ++L FS FGEV + ++KD T +S+G+ F+ ++S + A A+
Sbjct: 10 GTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAAV 69
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
++M+ ++L+GR I V++A + +GG + G
Sbjct: 70 DAMNGQDLNGRNIRVNLANE-RPAYGGGAQEGG 101
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 53/78 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++ V + ++T + +L++ F+ +GEV +VK++ D T +S+G+ FI + + +DA A+
Sbjct: 39 SAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAI 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
+ MD ++L GR I V+ A
Sbjct: 99 QGMDGQDLHGRRIRVNYA 116
>gi|220903771|ref|YP_002479083.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868070|gb|ACL48405.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 88
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+ I V NL ++T + ++ FSAFG+V V L+ D T +++G+ F++ DDA A
Sbjct: 1 MATSIYVGNLSWSTTQGDVESLFSAFGQVLSVNLISDRETGRARGFGFVEM-EDDDAANA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGK 124
+ ++D K +DGR + V+ A+P K
Sbjct: 60 ISALDGKEVDGRSLRVNKAEPKK 82
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L + T + TL++ FS FG + E +VKD T +S+G+ F++++S+ +A AL +
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNA 64
Query: 105 MDHKNLDGRLIYVDIA 120
M+++ DGR+I VD A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|238486470|ref|XP_002374473.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
gi|220699352|gb|EED55691.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
Length = 826
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
++ N +++R+ VRNL + T E L+ F+ FG + E+ + D SKG+A++QY
Sbjct: 295 NIENIRISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSSSKGFAYVQYVES 354
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A +++D K+ GRL+++
Sbjct: 355 DAAVEAYKALDGKHFQGRLLHI 376
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 704 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 762
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 763 ALKNTHLLGRKLVLEFA 779
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T +++L++ F FG V + +VKD T +S+G+ F+++++ D+A A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMN 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+++ DGR I VD A
Sbjct: 62 AMNNQEFDGRQIRVDKA 78
>gi|391867843|gb|EIT77082.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 826
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
++ N +++R+ VRNL + T E L+ F+ FG + E+ + D SKG+A++QY
Sbjct: 295 NIENIRISARLFVRNLSYDTKESDLEPVFAPFGRIEEIHVAFDTRFSSSKGFAYVQYVES 354
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A +++D K+ GRL+++
Sbjct: 355 DAAVEAYKALDGKHFQGRLLHI 376
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 704 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 762
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 763 ALKNTHLLGRKLVLEFA 779
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 52/78 (66%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V + F T +++L++ F +G V E +++ D T +S+G+ F+ YTS ++A A+
Sbjct: 39 SSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAI 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
+++D ++L GR + V+ A
Sbjct: 99 QALDGQDLHGRRVRVNYA 116
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 26 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 85
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 86 DGRMLDGRELRVQMARYGR 104
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 54/79 (68%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ V NL + T + TL++ FS FGEV + +++D T +++G+ F+ +++++ A A++
Sbjct: 2 SKLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVD 61
Query: 104 SMDHKNLDGRLIYVDIAKP 122
+++ + LDGR I V++A
Sbjct: 62 ALNEQELDGRRIRVNVANA 80
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 19 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 78
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 79 DGRKLDGRELRVQMARYGR 97
>gi|303322875|ref|XP_003071429.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111131|gb|EER29284.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 813
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%)
Query: 25 NPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS 84
+P T + A++ R+ +RNLP+ T E LQ EF+ FG++ E+ + D S
Sbjct: 271 DPAGSTDAIDANVKLIRETGRLFIRNLPYDTTEEDLQSEFARFGKLEELHIAFDSRHSTS 330
Query: 85 KGYAFIQYTSQDDALLALESMDHKNLDGRLIYV 117
KG+A+ Q+ D A+ A + +D K+ GRL++V
Sbjct: 331 KGFAYAQFFDPDSAIEAYKQLDGKDFQGRLMHV 363
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A+ N ++I+++NLPF + +Q F A+G++ V++ K + + ++G+AF + S
Sbjct: 682 AAKKNAARRTKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPK-KFDRTARGFAFADFVS 740
Query: 95 QDDALLALESMDHKNLDGRLIYVD 118
+A A++++ + +L GR + ++
Sbjct: 741 ACEAENAMDALRNTHLLGRKLVLE 764
>gi|397662818|ref|YP_006504356.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila]
gi|395126229|emb|CCD04410.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila]
Length = 91
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V NLPF T E L +FS +G++ E+ L+KD +T + KG+ FI +++Q +A ALE
Sbjct: 5 KIYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALE- 63
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + DGR + V +A+
Sbjct: 64 MNGQPFDGRSLKVCMAQ 80
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L T+E L+K FS +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 9 KLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K+LDG+ I V+ A
Sbjct: 69 MNGKSLDGKPIKVEQA 84
>gi|225461185|ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V L T L + FS FG+V ++V D ++ SKG+ F++Y S +DA +
Sbjct: 40 STNLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAEGI 99
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
+ MD K LDG +I+ + A+P
Sbjct: 100 KGMDGKFLDGWVIFAEYARP 119
>gi|320033511|gb|EFW15459.1| multiple RNA-binding domain-containing protein 1 [Coccidioides
posadasii str. Silveira]
Length = 813
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%)
Query: 25 NPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS 84
+P T + A++ R+ +RNLP+ T E LQ EF+ FG++ E+ + D S
Sbjct: 271 DPAGSTDAIDANVKLIRETGRLFIRNLPYDTTEEDLQSEFARFGKLEELHIAFDSRHSTS 330
Query: 85 KGYAFIQYTSQDDALLALESMDHKNLDGRLIYV 117
KG+A+ Q+ D A+ A + +D K+ GRL++V
Sbjct: 331 KGFAYAQFFDPDSAIEAYKQLDGKDFQGRLMHV 363
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A+ N ++I+++NLPF + +Q F A+G++ V++ K + + ++G+AF + S
Sbjct: 682 AAKKNAARRTKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPK-KFDRTARGFAFADFVS 740
Query: 95 QDDALLALESMDHKNLDGRLIYVD 118
+A A++++ + +L GR + ++
Sbjct: 741 AREAENAMDALRNTHLLGRKLVLE 764
>gi|116329160|ref|YP_798880.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116330232|ref|YP_799950.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359728391|ref|ZP_09267087.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|398330637|ref|ZP_10515342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|417778785|ref|ZP_12426585.1| hypothetical protein LEP1GSC036_4114 [Leptospira weilii str.
2006001853]
gi|418720562|ref|ZP_13279760.1| hypothetical protein LEP1GSC101_3438 [Leptospira borgpetersenii
str. UI 09149]
gi|418735286|ref|ZP_13291697.1| hypothetical protein LEP1GSC121_3914 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|421094008|ref|ZP_15554729.1| hypothetical protein LEP1GSC128_2981 [Leptospira borgpetersenii
str. 200801926]
gi|421100862|ref|ZP_15561481.1| hypothetical protein LEP1GSC125_1039 [Leptospira borgpetersenii
str. 200901122]
gi|116121904|gb|ABJ79947.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116123921|gb|ABJ75192.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|410363149|gb|EKP14181.1| hypothetical protein LEP1GSC128_2981 [Leptospira borgpetersenii
str. 200801926]
gi|410743540|gb|EKQ92283.1| hypothetical protein LEP1GSC101_3438 [Leptospira borgpetersenii
str. UI 09149]
gi|410748907|gb|EKR01800.1| hypothetical protein LEP1GSC121_3914 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410781045|gb|EKR65624.1| hypothetical protein LEP1GSC036_4114 [Leptospira weilii str.
2006001853]
gi|410796047|gb|EKR98187.1| hypothetical protein LEP1GSC125_1039 [Leptospira borgpetersenii
str. 200901122]
gi|456889098|gb|EMG00021.1| hypothetical protein LEP1GSC123_4298 [Leptospira borgpetersenii
str. 200701203]
Length = 86
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + +E TL F G V VK++ D+ + KSKG+ F++ ++D+A A++ +
Sbjct: 5 IYVGNLSYDLNEGTLGDLFRVHGTVNSVKIITDQYSGKSKGFGFVEMPNKDEADKAIKDL 64
Query: 106 DHKNLDGRLIYVDIAKPGKDRF 127
D KN+ R + V++AKP DRF
Sbjct: 65 DGKNVLTRNLKVNVAKPKNDRF 86
>gi|378776211|ref|YP_005184641.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|364507018|gb|AEW50542.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 112
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V NLPF T E L +FS +G++ E+ L+KD +T + KG+ FI +++Q +A ALE
Sbjct: 26 KIYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALE- 84
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + DGR + V +A+
Sbjct: 85 MNGQPFDGRSLKVCMAQ 101
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 54/81 (66%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V NL + T + TL++ FS FG+V + +++D T +S+G+ F+ ++S +A A
Sbjct: 1 MSTKVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ S++ + LDGR I V++A
Sbjct: 61 ISSLNEQELDGRRIKVNLANA 81
>gi|148358462|ref|YP_001249669.1| RNA binding protein [Legionella pneumophila str. Corby]
gi|296105810|ref|YP_003617510.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
2300/99 Alcoy]
gi|397665933|ref|YP_006507470.1| Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP) [Legionella pneumophila subsp.
pneumophila]
gi|148280235|gb|ABQ54323.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
str. Corby]
gi|295647711|gb|ADG23558.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
2300/99 Alcoy]
gi|395129344|emb|CCD07574.1| Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP) [Legionella pneumophila subsp.
pneumophila]
Length = 91
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V NLPF T E L +FS +G++ E+ L+KD +T + KG+ FI +++Q +A ALE
Sbjct: 5 KIYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALE- 63
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + DGR + V +A+
Sbjct: 64 MNGQPFDGRSLKVCMAQ 80
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
RI V L + T E TL++ FS FG+V E ++V + T +S+G+ F+ ++ A A+
Sbjct: 7 GRIFVGGLSWDTTERTLERAFSDFGKVIETQVVTERDTGRSRGFGFVTFSEPRAADAAIR 66
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M + LDGR I V+ A+P
Sbjct: 67 EMHNGELDGRTISVNKAQP 85
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 144
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + L++ F FG V K++ + T +SKG+ F++ S DA A
Sbjct: 1 MGNKLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ M+ ++L GR I V+ A+P
Sbjct: 61 INGMNGQSLGGRSIVVNEARP 81
>gi|124805915|ref|XP_001350574.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23496698|gb|AAN36254.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 1119
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++V+NL F ++ L+K FSAFG V V++ K+ + +S+GYAFI++ S+ ++ A
Sbjct: 981 VTKKLVVKNLAFQVNKEELRKLFSAFGNVKSVRIPKN-VYNRSRGYAFIEFMSKKESCNA 1039
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ES+ H +L GR + +D A
Sbjct: 1040 IESLQHTHLYGRHLIIDFA 1058
>gi|344345229|ref|ZP_08776084.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
gi|343803180|gb|EGV21091.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
Length = 90
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI V NLP++ + L+ FS FGE+A +++KD+ + +SKG+ F+ + +A A+++
Sbjct: 2 RIYVGNLPYSVTDDELRDIFSGFGELASAEVIKDKFSGQSKGFGFVDMPNNSEADTAIKA 61
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
++ ++ GR + V+ A+P +R PR G
Sbjct: 62 LNESDMKGRKLTVNEARPRAER----PRGGG 88
>gi|406911424|gb|EKD51218.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 125
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 56/87 (64%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ ++ + NLP++ + L+ AFGEV ++++D+ +SKG+ F++ + ++A A
Sbjct: 1 MSKKLYIGNLPYSVDDAQLESMAVAFGEVVSAQVIQDKFNGRSKGFGFVEMANDEEAQKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFG 128
++ +++K +DGR I V+ A+P + R G
Sbjct: 61 IDDLNNKEIDGRKIIVNEARPMEKRDG 87
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 82 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 141
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 142 DGAVLDGRELRVQMARYGR 160
>gi|317152646|ref|YP_004120694.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942897|gb|ADU61948.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A + V NLP+ E L+ F A+GEV VKLV D T + +G+ F++ Q AL A
Sbjct: 1 MAKNLYVGNLPWNCTEEELRAAFEAYGEVRSVKLVNDHETDRPRGFGFVEMGDQ-GALEA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+E+++ +L GR I V+ A+P +R
Sbjct: 60 VENLNGSSLGGRSIKVNEARPRPER 84
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 27 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 86
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 87 DGRMLDGRELRVQMARYGR 105
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 84
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 85 DGRMLDGRELRVQMARYGR 103
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +L+ F+++GE+ + K++ D T +S+G+ F+ ++S++ L A+E+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +L+ F+++GE+ + K++ D T +S+G+ F+ ++S++ L A+E+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +L+ F+++GE+ + K++ D T +S+G+ F+ ++S++ L A+E+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 40 YPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDAL 99
+ +A ++ V NL + T E +L+ FS FG VA K++ D T SKG+ F++ ++ ++A
Sbjct: 20 FSMAKKLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEAS 79
Query: 100 LALESMDHKNLDGRLIYVDIA--KPGKDR-FGGYPR 132
A+ + + +GR + V+ A KP ++R GGY R
Sbjct: 80 AAIAGTNGREFEGRQLRVNEAMDKPRRERDNGGYNR 115
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +L+ F+++GE+ + K++ D T +S+G+ F+ ++S++ L A+E+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +L+ F+++GE+ + K++ D T +S+G+ F+ ++S++ L A+E+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +L+ F+++GE+ + K++ D T +S+G+ F+ ++S++ L A+E+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
Query: 16 FANSLTNRENPC---FRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAE 72
++SL + PC FR LR + S+I V+ L F+T E L + FS +G V +
Sbjct: 7 ISSSLLSHSKPCTSVFRHLFLR------RITSKIFVKGLAFSTTEEKLAEAFSQYGNVVK 60
Query: 73 VKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDR 126
+V ++ K+ KG+ ++ + +++A A M+ K L GR++YVD+ P + +
Sbjct: 61 ADIVLNKAKKRCKGFGYVTFAEEEEARKAQIGMNGKILHGRVLYVDMDPPNEQK 114
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NLPF+ E L++ F+A+G V V+L+ D T + +G+ F+ S DA A+E++
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTM-SDTDAASAIEAL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPR 132
D K+ GR + V+ A+ K+R G PR
Sbjct: 63 DGKDFGGRNLRVNEAQERKERPSGGPR 89
>gi|52840506|ref|YP_094305.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52627617|gb|AAU26358.1| RNA binding protein, cold-inducible rrm [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 92
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V NLPF T E L +FS +G++ E+ L+KD +T + KG+ FI +++Q +A ALE
Sbjct: 6 KIYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALE- 64
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + DGR + V +A+
Sbjct: 65 MNGQPFDGRSLKVCMAQ 81
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 54/80 (67%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S++ V L ++ E +L+ FS+FGEV+EV+++ D+ + +S+G+ F+ ++ +++A+
Sbjct: 22 PPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVC 81
Query: 101 ALESMDHKNLDGRLIYVDIA 120
A ++MD K L GR + + A
Sbjct: 82 AKDAMDGKALLGRPLRISFA 101
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS FGE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|119189731|ref|XP_001245472.1| hypothetical protein CIMG_04913 [Coccidioides immitis RS]
gi|392868364|gb|EAS34142.2| multiple RNA-binding domain-containing protein 1 [Coccidioides
immitis RS]
Length = 813
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 24 ENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK 83
++P T + A++ R+ +RNLP+ T E LQ EF+ FG++ E+ + D
Sbjct: 270 KDPAGSTDAIDANVKLIRETGRLFIRNLPYDTTEEDLQSEFARFGKLEELHVAFDSRHST 329
Query: 84 SKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKD-RFGGYPRTSGPPK-QQP 141
SKG+A+ Q+ D A+ A + +D K+ GRL++V A K + Y + P K QQ
Sbjct: 330 SKGFAYAQFFDPDSAIEAYKQLDGKDFQGRLMHVLPASSKKTYKINEYELSKLPLKRQQQ 389
Query: 142 LSEQDEVADCWY 153
+ + E A +
Sbjct: 390 IKRRAEAASSTF 401
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A+ N ++I+++NLPF + +Q F A+G++ V++ K + + ++G+AF + S
Sbjct: 682 AAKKNAARRTKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPK-KFDRTARGFAFADFVS 740
Query: 95 QDDALLALESMDHKNLDGRLIYVD 118
+A A++++ + +L GR + ++
Sbjct: 741 AREAENAMDALRNTHLLGRKLVLE 764
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L + T E +L++ FS +G +A+V +++D T +S+G+ F+ + + +DA A+
Sbjct: 5 GKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMA 64
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ K +DGR+I VD A
Sbjct: 65 AMNGKQVDGRMIRVDEA 81
>gi|156379079|ref|XP_001631286.1| predicted protein [Nematostella vectensis]
gi|156218324|gb|EDO39223.1| predicted protein [Nematostella vectensis]
Length = 683
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK--GYAFIQYTSQDDALLAL 102
R+++RNL F E L++ FSAFGEV+E + + ++ ++++ G+ F+Q+T+ DA AL
Sbjct: 111 RLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKAL 170
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
E M+ K + GR + VD A P
Sbjct: 171 EEMNAKKILGRPVAVDWAVP 190
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ +RNL F + + + F FG++A K+V D +T+ SKG AF++Y S + L +
Sbjct: 281 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAAT 340
Query: 106 DHKN----LDGRLIYVDIA-KPGK 124
D + LDG + VD+A PGK
Sbjct: 341 DEDSEGLFLDGNRLQVDLAVTPGK 364
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK-KSKGYAFIQYTSQDDALLALES 104
I VRNLP+ + + F G + +VKD+ + + +G+ ++ + ++DAL A ++
Sbjct: 2 IFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEEDALKAKDN 61
Query: 105 MDHKNLDGRLIYVDIA------KPGKD 125
+ K++ GR I++D + KPG++
Sbjct: 62 I--KSIKGRPIHLDFSEKKARTKPGRE 86
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T L+K FS FGE+ E K++ D T +S+G+ F+ + ++ A+E
Sbjct: 9 RCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + L++ FS FG V+ K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDSDLEQAFSQFGAVSSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRT 133
+ M+ + L GR + V+ A+P + R PRT
Sbjct: 61 INGMNGQPLGGRSVVVNEARPMESR----PRT 88
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 84
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 85 DGRMLDGRELRVQMARYGR 103
>gi|291396317|ref|XP_002714523.1| PREDICTED: zinc finger CCHC-type and RNA binding motif 1-like
[Oryctolagus cuniculus]
Length = 246
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 36 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGIAFILFLDKDSAQN 95
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 96 CTRAINNKQLFGRVIKASIA 115
>gi|54296292|ref|YP_122661.1| hypothetical protein lpp0321 [Legionella pneumophila str. Paris]
gi|53750077|emb|CAH11469.1| hypothetical protein lpp0321 [Legionella pneumophila str. Paris]
Length = 91
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V NLPF T E L +FS +G++ E+ L+KD +T + KG+ FI +++Q +A ALE
Sbjct: 5 KIYVGNLPFGTTEEALSIQFSQYGKIEEMFLIKDRLTGQMKGFGFITFSAQQEAESALE- 63
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + DGR + V +A+
Sbjct: 64 MNGQPFDGRSLKVCMAQ 80
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V + + T + +L FS +G+V E K++ D + +S+G+ F+ +TS ++A A+
Sbjct: 30 SSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAGAAI 89
Query: 103 ESMDHKNLDGRLIYVDIA 120
MD K+L GR++ V A
Sbjct: 90 TGMDGKDLQGRIVRVSYA 107
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ FS FGEV ++ + +D T +S+G+AF++Y + +A A+ M
Sbjct: 17 LKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGM 76
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D +DGR + V IAK G+
Sbjct: 77 DGHKVDGREVRVQIAKYGR 95
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NL ++ + +LQ FS FG V K++ D T +SKG+ F++ + +A A
Sbjct: 1 MGNKLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ M+ + L+GR + V+ A+P ++R
Sbjct: 61 INGMNGQPLEGRAVVVNEARPREER 85
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
RI VRNL +T E ++ F FG ++EV L D+IT+K KG+AF+ + + A+ A
Sbjct: 325 RIFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKAFSE 384
Query: 105 MDHKNLDGRLIYVDIAK 121
+D K L GRL+++ AK
Sbjct: 385 LDGKLLQGRLLHLIPAK 401
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLA 101
+++I+VRN+PF + LQ+ FS FG + +++L K T + +G+AF+ + +++DA A
Sbjct: 736 STKILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKRA 795
Query: 102 LESM-DHKNLDGRLIYVDIA 120
+++ +L GR + ++ A
Sbjct: 796 FQALCQSTHLYGRRLVLEWA 815
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK-----SKGYAFIQYTSQDDALL 100
+ V+NL F+T E L++ F+ G + EV + K + K S GY F+Q+ + A
Sbjct: 634 LFVKNLNFSTTEDALREHFAGCGPIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSAKK 693
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
AL+ + H LD + + ++K
Sbjct: 694 ALKQLQHSKLDEHAVELKLSK 714
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKL--VKDEITKKSKGYAFIQYTSQDDALLA 101
SRI+V+NLP E L++ FS+ G + +++L K+ + ++ +AF+ Y + A +A
Sbjct: 2 SRIIVKNLPKRVKEDRLREFFSSKGTITDLQLKYTKEGVFRR---FAFVGYKDEAQAAVA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
E + LD + VDI K
Sbjct: 59 KEYFHNAYLDTSKLQVDICK 78
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 53/78 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++ + + ++T E L++ FS +G+V + K++ D T +S+G+ FI + + ++A AL
Sbjct: 39 SAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSAL 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
++MD+K LDGR + V+ A
Sbjct: 99 QAMDNKELDGRTVRVNYA 116
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 56/81 (69%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V NL ++T + TL++ FS +G+V + +++D T +S+G+ F+ ++S+ +A A
Sbjct: 1 MSTKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ S+ ++LDGR I V++A
Sbjct: 61 INSLHEQDLDGRRIKVNLANA 81
>gi|346322586|gb|EGX92185.1| glycine-rich RNA-binding protein [Cordyceps militaris CM01]
Length = 182
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L + T E TL+++F FG V E +VKD T +S+G+ F++Y DA A+
Sbjct: 2 AKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQDADAQSAIA 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%)
Query: 37 LSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQD 96
+++ + R V L + T + +L FS FGEV E K+V D T +S+G+ F+ ++ +
Sbjct: 1 MASAEIEFRCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQ 60
Query: 97 DALLALESMDHKNLDGRLIYVDIAKP 122
+ A+E+M+ K LDGR I V+ A+
Sbjct: 61 AMMDAIEAMNGKELDGRNITVNQAQS 86
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAILDGRELRVQMARYGR 94
>gi|449494871|ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
sativus]
Length = 95
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
L S + + L T L+ FS FG ++E +L++D T++ KG+ F+ + S +A A
Sbjct: 5 LGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKA 64
Query: 102 LESMDHKNLDGRLIYVDIAKPGK 124
L++MD + +DGRLI+V+ AK K
Sbjct: 65 LKAMDGRIVDGRLIFVEFAKTEK 87
>gi|389586278|dbj|GAB69007.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1121
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++V+NL F + L+K FSAFG + V++ K+ + S+GYAF+++ S+++ L A
Sbjct: 978 ITKKLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNR-SRGYAFVEFMSKNECLTA 1036
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ES+ H +L GR + +D A
Sbjct: 1037 IESLQHTHLYGRHLIIDFA 1055
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDE--ITKK-------------SKGYA 88
+ I ++NL F T E L+K F +VK + I+KK S+GY
Sbjct: 864 ASIYIKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKKAISKKNQEKGKETEQKLMSQGYG 923
Query: 89 FIQYTSQDDALLALESMDHKNLDGRLIYVDIAK 121
F+++ S++ A+ A++ + LDG ++ + +++
Sbjct: 924 FVEFKSKELAVEAIKKLTATTLDGHVLELSLSR 956
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F +GE+ ++ + +D T +S+G+AF++Y + DA A++SM
Sbjct: 20 LKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRYYEERDAEDAMDSM 79
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D K +DGR I V +A+ G+
Sbjct: 80 DGKVIDGREIRVAMARYGR 98
>gi|195439120|ref|XP_002067479.1| GK16446 [Drosophila willistoni]
gi|194163564|gb|EDW78465.1| GK16446 [Drosophila willistoni]
Length = 929
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 39 NYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDA 98
N + RI RNL +T E LQK F FG V E+ L D+IT+K KG+ + Y + A
Sbjct: 372 NISESGRIFFRNLAYTITETDLQKLFEQFGPVVEINLPVDKITRKIKGFGTVTYMMPEHA 431
Query: 99 LLALESMDHKNLDGRLIYVDIAKPGKD 125
L A S+D + GRL+++ PGK+
Sbjct: 432 LKAFNSLDGSDFHGRLLHL---LPGKE 455
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS--KGYAFIQYTSQDDALL 100
++I+VRN+PF ++ F AFGE+ +++ K + +G+ F+ + ++ DA
Sbjct: 791 GTKILVRNIPFQAQYREVRDIFKAFGELTSLRIPKKMAPGEDAHRGFGFVDFVTKADAKR 850
Query: 101 ALESMD-HKNLDGRLIYVDIA 120
A +++ +L GR + ++ A
Sbjct: 851 AFDALSASTHLYGRRLVLEWA 871
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK-----DEITKKSKGYAFIQYTSQDDALL 100
I +RNL F T + T+ + F G + V++ + + S GY FIQ+ A
Sbjct: 688 IFLRNLNFKTVQETVWEHFRHLGTIHTVEIARRADPQNPRHSTSLGYGFIQFKKHSVAEN 747
Query: 101 ALESMDHKNLDGRLI 115
AL++M +DG +
Sbjct: 748 ALKNMQMTTIDGNSV 762
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ + V NL + E LQ EF +FGE++ V+++ + T +S+G+ +++YT+ DA A E
Sbjct: 1 ANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFE 60
Query: 104 SMDHKNLDGRLIYVDIA--KPG-KDRFGGY 130
+ +DGR+I +D A +P KD+ GG+
Sbjct: 61 AKKGAEIDGRVINLDYATGRPANKDQQGGF 90
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 19 SLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKD 78
+R N R+F +AS P + + V NLPF +E ++ + F G + ++L D
Sbjct: 89 GFKDRANARARSFGDQAS----PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTD 144
Query: 79 EITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+ + KG+ ++QY+S D+A A + +L GR + +D + P
Sbjct: 145 PDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTP 188
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 22 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 81
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 82 DGRMLDGRELRVQMARYGR 100
>gi|26343509|dbj|BAC35411.1| unnamed protein product [Mus musculus]
Length = 521
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNL +T+ E L+K FSA+G ++E+ D +TKK KG+AF+ + + A+ A
Sbjct: 399 SGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAY 458
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDEVADCW 152
+D + GR+++V + K P PP+Q DCW
Sbjct: 459 AEVDGQVFQGRMLHV-LPSTIKKEASQAPAALSPPQQ----------DCW 497
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQAA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQ 139
L +D I V+ K P K R + + + S PKQ
Sbjct: 59 LNHFHRSFIDTTRITVEFCKSFGDPSKPRAWSKHAQKSSQPKQ 101
>gi|338214373|ref|YP_004658434.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
gi|336308200|gb|AEI51302.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
Length = 127
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V N+PF ++ L++ F FGEV+ +++ D+ T KS+G+AF++ + D+A A+ +
Sbjct: 3 IYVANVPFKANDDELRELFEEFGEVSSARIIMDKFTGKSRGFAFVEMPNDDEAKQAISQL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRT 133
+ + G+++ V+ A+P +DR PRT
Sbjct: 63 NDFDFMGKVLVVNEARPREDR----PRT 86
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I+V L + T E TL+KEF +G + V+++ D+ + K KGYAFI+Y ++ D LALE
Sbjct: 122 IVVSRLSYKTDEKTLKKEFEVYGPIKRVRIIIDQHSGKPKGYAFIEYDNERDFQLALERG 181
Query: 106 DHKNLDGRLIYVD 118
+ + +DG + VD
Sbjct: 182 NGRRVDGARVVVD 194
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V L F T + L+ FS FG + E L+ D+ T++ KG+ F+ Y S+ +A A
Sbjct: 5 IGTKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKA 64
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
++++ + +DGRLI+V+ AKP
Sbjct: 65 RKALNGRIVDGRLIFVEHAKP 85
>gi|344232148|gb|EGV64027.1| multiple RNA-binding domain-containing protein 1 [Candida tenuis
ATCC 10573]
Length = 840
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ +RN+ +T+ E ++ F+++G + EV + D T KSKG+ +IQ+T+ +DA+ A E
Sbjct: 310 RLFIRNISYTSTEEEFRELFASYGNLEEVHVAIDTRTGKSKGFVYIQFTNPEDAVKAYEV 369
Query: 105 MDHKNLDGRLIYVDIAKPGKD-RFGGYPRTSGPPKQQ 140
+D + GRL+++ A+ KD R + + P K+Q
Sbjct: 370 LDKEIFQGRLLHILPAEKKKDHRMDEFDLQNLPLKKQ 406
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR++V+ LP E L+ F G+V+++KL+K +S+ +AFI Y S DA A+
Sbjct: 2 SRLIVKGLPQYLTEDKLKSHFDKHGDVSDIKLMKKR-NGESRRFAFIGYKSPSDAESAVT 60
Query: 104 SMDHKNLDGRLIYVDIAK 121
++ +D I V++AK
Sbjct: 61 YFNNSFIDTARISVEVAK 78
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I+++NLPF + + F AFG++ ++ K + + ++G+AF++++ +A A+ +
Sbjct: 718 IIIKNLPFEATRKDIIELFGAFGQIKSARVPK-KFDRSARGFAFVEFSLLKEAENAMNQL 776
Query: 106 DHKNLDGRLIYVD 118
+ +L GR + +D
Sbjct: 777 EGVHLLGRRLVMD 789
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK------SKGYAFIQYTSQDDAL 99
+ V+NL F+T L K F + A V LVK + K S G+ F+++ +++DA
Sbjct: 619 VFVKNLNFSTTTEQLAKIFKSLPGFA-VALVKTKPDAKNPNSTLSMGFGFVEFRTKEDAN 677
Query: 100 LALESMDHKNLDGRLIYVDIA 120
A+ MD LDG + + ++
Sbjct: 678 KAISLMDGHVLDGHKLQLKLS 698
>gi|298712969|emb|CBJ26871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 319
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ + + + T E L++EF FG + +++V+DE K +GYAF++Y ++DD +A +
Sbjct: 123 LFIAKISYDTTEKKLRREFEQFGRIQSIRMVQDE-DGKPRGYAFVEYENEDDMRVAYKRG 181
Query: 106 DHKNLDGRLIYVDIAK 121
D + +DGR + VD+ +
Sbjct: 182 DGRKIDGRRVLVDVER 197
>gi|298528142|ref|ZP_07015546.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511794|gb|EFI35696.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ + V NLP++T E L+ F+ FGEV+ K+++D T +S+G+ F++ + D A+E
Sbjct: 2 TNLYVGNLPWSTTEAQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFVEMENGADE--AIE 59
Query: 104 SMDHKNLDGRLIYVDIAKPGKD-RF 127
+++ K+ GR I V++AKP ++ RF
Sbjct: 60 ALNGKDYGGRSIKVNVAKPKRESRF 84
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAILDGRELRVQMARYGR 94
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+++ V +L + T + +LQ FS G V+ +++ D T +SKG+ F++ +S ++A A
Sbjct: 1 MATKLFVGSLAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ ++ K LDGR I V+ A+P
Sbjct: 61 VAELNGKELDGRAIVVNEARP 81
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 7 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 66
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
A+E M+ K LDGR I V+ A+
Sbjct: 67 XXXXXRSAIEGMNGKELDGRNITVNEAQS 95
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ V L + T + TL++ F FGE+ E +VKD T +S+G+ F+++ + +A AL
Sbjct: 2 SKLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSALG 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+++ DGR+I VD A
Sbjct: 62 AMNNQEFDGRVIRVDKA 78
>gi|395841539|ref|XP_003793592.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Otolemur garnettii]
Length = 217
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRMIKASIA 86
>gi|344924967|ref|ZP_08778428.1| RNA-binding region RNP-1 [Candidatus Odyssella thessalonicensis
L13]
Length = 94
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 53/81 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ ++ TL + F G V K++ D+++ +SKG+ F++ S+ A A
Sbjct: 1 MNNKLYVSNLPYSVNDQTLAQLFGDHGAVVSAKVITDKMSGRSKGFGFVEMESEQQANSA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+E ++ ++L+GR + V IA+P
Sbjct: 61 MEKLNGQDLNGRRMNVAIARP 81
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ RI +RNL +TT E L+K FS +G+++E+ + + +K+S G AFI Y ++A+ AL
Sbjct: 342 SGRIFIRNLSYTTKEEDLEKVFSKYGKISEIHIPINYESKQSIGIAFILYLIPENAVTAL 401
Query: 103 ESMDHKNLDGRLIYVDIAK 121
MD K GR+I+V AK
Sbjct: 402 NEMDGKVFQGRIIHVLPAK 420
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S+I+++NLPF + ++K F+A+GE+ V++ K + +G+ F+++ ++++A A+
Sbjct: 779 SSKIIIKNLPFESTTKEIRKLFAAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEEAKNAM 837
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
E++ + GR + + A+ K+
Sbjct: 838 EALGSSHFYGRHLVLQYAEQDKN 860
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+RI V+ LP + ++ F FG V + K++K + KS+ + FI + +++ A AL
Sbjct: 4 TRICVKQLPKHLTDKRFKEHFEKFGVVTDAKIIKKD--GKSRLFGFIGFANENSAKNAL- 60
Query: 104 SMDHKNLDGRLIYVDIA 120
S++ +D I V+IA
Sbjct: 61 SLNGTFIDTSKIVVEIA 77
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
++V+N+PF T E L+ FS FGE+A V L ++ A I+Y ++A +++
Sbjct: 530 LLVKNIPFKTDEEELELLFSKFGELARVVLA------PARTIALIEYLHPNEAKSGFKNL 583
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGP 136
+ +Y++ A G + PR P
Sbjct: 584 AYTKFHHVPLYLEWAPEGVFKNPAPPRDPKP 614
>gi|116283271|gb|AAH05099.1| ZCRB1 protein [Homo sapiens]
Length = 141
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|33873902|gb|AAH10177.1| ZCRB1 protein [Homo sapiens]
Length = 140
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R + NL ++T + +L+ F FG + E K+V D+ + +S+G+ F+ + + A+E
Sbjct: 8 RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 105 MDHKNLDGRLIYVDIAK---PGKDRFG 128
M+ +LDGR I VD A+ PG+DR G
Sbjct: 68 MNGLDLDGRAITVDKAQPQGPGRDRNG 94
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|296217449|ref|XP_002755014.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Callithrix
jacchus]
Length = 394
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A+
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K LDG+ I V
Sbjct: 68 DMNGKTLDGKAIKV 81
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 53/80 (66%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++ V NL + T++ +L++ FS FG V + ++KD T +S+G+ F+ +++Q +A A+
Sbjct: 3 SAKVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAI 62
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
++ + LDGR I V++A
Sbjct: 63 GGLNEQELDGRRIRVNLANA 82
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V NL + E LQ EF +FGE++ V+++ + T +S+G+ +++YT+ DA A
Sbjct: 284 SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 343
Query: 103 ESMDHKNLDGRLIYVDIA--KPG-KDRFGGY 130
E+ +DGR+I +D A +P KD+ GG+
Sbjct: 344 EAKKGAEIDGRVINLDYATGRPANKDQQGGF 374
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
+R N R+F +AS P + + V NLPF +E ++ + F G + ++L D +
Sbjct: 376 DRANARARSFGDQAS----PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDS 431
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+ KG+ ++QY+S D+A A + +L GR + +D + P
Sbjct: 432 GRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTP 472
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V NL + E LQ EF +FGE++ V+++ + T +S+G+ +++YT+ DA A
Sbjct: 287 SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 346
Query: 103 ESMDHKNLDGRLIYVDIA--KPG-KDRFGGY 130
E+ +DGR+I +D A +P KD+ GG+
Sbjct: 347 EAKKGAEIDGRVINLDYATGRPANKDQQGGF 377
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
+R N R+F +AS P + + V NLPF +E ++ + F G + ++L D +
Sbjct: 379 DRANARARSFGDQAS----PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDS 434
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+ KG+ ++QY+S D+A A + +L GR + +D + P
Sbjct: 435 GRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTP 475
>gi|291401141|ref|XP_002716956.1| PREDICTED: zinc finger CCHC-type and RNA binding motif 1-like
[Oryctolagus cuniculus]
Length = 217
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|310790005|gb|EFQ25538.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 846
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
+L+ +R+ VRNLPF+T+E LQ F +GE+ EV L SKG+A +Q+ S
Sbjct: 310 TLATIKRNARLFVRNLPFSTNEDDLQTHFGQYGELQEVHLPV-TAAGASKGFAMVQFMSG 368
Query: 96 DDALLALESMDHKNLDGRLIYVDIAKPGKD 125
+ A+ A +S D + GRL++V A+ +D
Sbjct: 369 ESAVAAFQSTDGQTFQGRLLHVLPAEGKRD 398
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F +G++ V+L K + ++G+AF ++ + +A AL
Sbjct: 721 TKIVIKNLPFEATKKDIRTLFGTYGQLRAVRLPK-KFGNSTRGFAFAEFVTPREAENALN 779
Query: 104 SMDHKNLDGRLIYVD 118
++ +L GR + +D
Sbjct: 780 ALRDTHLLGRRLVLD 794
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 1 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 60
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
A+E M+ K LDGR I V+ A+
Sbjct: 61 XXXXXRSAIEGMNGKELDGRNITVNEAQS 89
>gi|442555271|ref|YP_007365096.1| RNA recognition domain-containing protein [Lawsonia intracellularis
N343]
gi|441492718|gb|AGC49412.1| RNA recognition domain-containing protein [Lawsonia intracellularis
N343]
Length = 88
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A I V NLP++ E +Q FS +G V VKLV D T +++G+ F++ + A A
Sbjct: 1 MAKSIYVGNLPWSATEEQVQSLFSEYGHVMAVKLVSDRETGRARGFGFVE-MEEPGATAA 59
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+E++D+ N GR + V+ AKP
Sbjct: 60 IEALDNANFGGRTLRVNEAKP 80
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 53/78 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++ V + ++T + +L++ F+ +GEV +VK++ D T +S+G+ F+ + + +DA A+
Sbjct: 39 SAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAI 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
+ MD ++L GR I V+ A
Sbjct: 99 QGMDGQDLHGRRIRVNYA 116
>gi|328855010|gb|EGG04139.1| hypothetical protein MELLADRAFT_78422 [Melampsora larici-populina
98AG31]
Length = 325
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
+N L +I V NL FTT E L++ F A G +++V+++ +S GY F+ + +D
Sbjct: 29 TNLELGRKIFVGNLNFTTKEDQLKELFVAHGSISDVQIILR--GTRSLGYGFVTFDKAED 86
Query: 98 ALLALESMDHKNLDGRLIYVDIAKPGKDRFGG-YPR 132
A A+ ++D +DGR + V+IAKP GG PR
Sbjct: 87 AEKAVAAIDKTEIDGRTVNVEIAKPAPGTPGGPAPR 122
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK---KSKGYAFIQYTSQDDALLAL 102
+ V NLPF+ + L+ F+A+ EV +V+ + + KSKG+ F+++ ++ AL
Sbjct: 226 LFVANLPFSLTDEGLKDFFNAY-EVTSAHVVRRKFGQSAGKSKGFGFVEFANEAAQQKAL 284
Query: 103 ESMDHKNLDGRLIYVDIA 120
E K ++GR +++ +A
Sbjct: 285 EESQGKEMNGRELHIKVA 302
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 53/78 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++ V + ++T + +L++ F+ +GEV +VK++ D T +S+G+ F+ + + +DA A+
Sbjct: 39 SAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAI 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
+ MD ++L GR I V+ A
Sbjct: 99 QGMDGQDLHGRRIRVNYA 116
>gi|332664392|ref|YP_004447180.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332333206|gb|AEE50307.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
Length = 130
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V L F T + L++ F +G V K++ D+ T +SKG+ F++ + D+AL A+E +
Sbjct: 3 IFVAKLSFDTQDDDLREAFEQYGIVDSAKIIVDQSTGRSKGFGFVEMPNDDEALNAIEGL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
D+ +LDGR I +AK +DR
Sbjct: 63 DNSDLDGRTI---VAKKAEDR 80
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 53/80 (66%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+++ V NL + T + +L FSA+G++ + ++KD T +S+G+ F+ + +Q +A A
Sbjct: 1 MAAKVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAA 60
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+ +++ + LDGR I V++A
Sbjct: 61 IAALNEQELDGRRIRVNMAN 80
>gi|406954527|gb|EKD83359.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 95
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NLP++ E L+ F +GEV ++KD T +SKG+ F++ T+ A A++++
Sbjct: 3 IYVGNLPYSATEEQLKTMFGVYGEVTTASIIKDRDTGRSKGFGFVEMTNDAAAEEAIQAL 62
Query: 106 DHKNLDGRLIYVDIAKP--GKDRFGGYPR 132
+ +++GR I V+ A+P ++R GG R
Sbjct: 63 NETDMNGRNIKVNQARPKEKRERSGGGDR 91
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++++ V L + T+E L+ F GE+ EVK++ D +T KS+GY F+++ S+ A A
Sbjct: 57 STKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAAAR 116
Query: 103 ESMDHKNLDGRLIYVDIAKPGK 124
+ M+ + LDGR I V A G+
Sbjct: 117 KEMNGQILDGRRIRVSYAHKGE 138
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|297691580|ref|XP_002823157.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Pongo abelii]
gi|297691582|ref|XP_002823158.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Pongo abelii]
Length = 217
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 26 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 85
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 86 DGRMLDGRELRVQMARYGR 104
>gi|67972060|dbj|BAE02372.1| unnamed protein product [Macaca fascicularis]
Length = 151
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|255075605|ref|XP_002501477.1| predicted protein [Micromonas sp. RCC299]
gi|226516741|gb|ACO62735.1| predicted protein [Micromonas sp. RCC299]
Length = 951
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
R+ VRNLPFT E + F+ +G +A V ++ D+ TK+SKG A+I Y ++A A+E
Sbjct: 378 GRLFVRNLPFTATEEEVAAHFAPYGNLAGVFILADKATKRSKGLAYITYALPENASRAME 437
Query: 104 SMDHKNLDGRLIYV 117
+D GRLI++
Sbjct: 438 ELDGSIFQGRLIHL 451
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P +SR+ V+N+P E L++ F+ GEV +VK++K KS+ AF+ Y + DA+
Sbjct: 24 PPSSRLCVKNIPKHLKEDRLREHFAERGEVTDVKILKTG-DGKSRQMAFVGYKTTADAVK 82
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
ALE + +D + V+ A+
Sbjct: 83 ALEYFHNTFIDTSRVQVEYAR 103
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK--------SKGYAFIQYTS 94
A+R+ V+ L F T + +L+ F A +++ + + S+GY F+++ S
Sbjct: 720 ATRLFVKGLSFNTTDASLRAHFLRAAAAASGRVLAATVATQKGPGGANLSRGYGFVEFDS 779
Query: 95 QDDALLALESMDHKNLDGRLIYVDIA 120
A A +M K LDGR + ++I+
Sbjct: 780 PGAARSAKRAMQGKELDGRALRLEIS 805
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
A++I+VRN+ F + +QK F+ FG + +L K + +G+AF++ +++ +A AL
Sbjct: 834 ATKIVVRNVAFEATKRDIQKLFNPFGTLKSCRLPK-KFDGSHRGFAFVELSTKREASAAL 892
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
E++ +L GR + ++ A D
Sbjct: 893 EALAGTHLYGRRLTIERAAESDD 915
>gi|406929348|gb|EKD64949.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 106
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A + V LPFT L++ F + G+V V ++KD T S+G+ F++ + +DA A
Sbjct: 1 MAKNLFVGGLPFTIAGEALEQLFGSVGQVQSVNIIKDRYTGNSRGFGFVEMVNDEDAKKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+E ++ NL+GR I V A P
Sbjct: 61 IEKLNGYNLEGRNIVVKEALP 81
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T L++ F+ FGEV +++ D +T SKG+ F++Y + +DA +E M
Sbjct: 50 LFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGM 109
Query: 106 DHKNLDGRLIYVDIAKP 122
D + LDG +I+ + A+P
Sbjct: 110 DGEFLDGWVIFAEYARP 126
>gi|301772778|ref|XP_002921809.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ailuropoda melanoleuca]
gi|281341848|gb|EFB17432.1| hypothetical protein PANDA_010724 [Ailuropoda melanoleuca]
Length = 217
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|261855638|ref|YP_003262921.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
gi|261836107|gb|ACX95874.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
Length = 98
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + + + ++ F AFGEV K+++D T +SKG+AF++ + + A+E +
Sbjct: 4 IYVGNLSYQSGDADVRSAFEAFGEVKSAKVIQDMATGRSKGFAFVEMADKAAGMTAIEQL 63
Query: 106 DHKNLDGRLIYVDIAKP 122
D+ +L+GR I V+ A+P
Sbjct: 64 DNTDLNGRNIRVNEARP 80
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 53/89 (59%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NL ++ + L + FS FG V K++ D T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGY 130
+ ++ + + GR I V+ A+P +D+ GG+
Sbjct: 61 INGLNGQAIGGRAIVVNEARPREDKPGGF 89
>gi|426372226|ref|XP_004053029.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|426372228|ref|XP_004053030.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Gorilla gorilla gorilla]
Length = 217
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|403269360|ref|XP_003926714.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Saimiri boliviensis boliviensis]
Length = 217
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|348580279|ref|XP_003475906.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Cavia porcellus]
Length = 215
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|306922392|ref|NP_001182450.1| zinc finger CCHC-type and RNA binding motif 1 [Macaca mulatta]
gi|296211431|ref|XP_002752407.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Callithrix jacchus]
gi|332206508|ref|XP_003252335.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Nomascus leucogenys]
gi|402885675|ref|XP_003906274.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Papio anubis]
gi|402885677|ref|XP_003906275.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Papio anubis]
gi|441632478|ref|XP_004089692.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Nomascus leucogenys]
gi|380783333|gb|AFE63542.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Macaca mulatta]
gi|383422349|gb|AFH34388.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Macaca mulatta]
gi|384949990|gb|AFI38600.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Macaca mulatta]
Length = 217
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V NL + E LQ EF +FGE++ V+++ + T +S+G+ +++YT+ DA A
Sbjct: 286 SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 345
Query: 103 ESMDHKNLDGRLIYVDIA--KPG-KDRFGGY 130
E+ +DGR+I +D A +P KD+ GG+
Sbjct: 346 EAKKGAEIDGRVINLDYATGRPANKDQQGGF 376
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
+R N R+F +AS P + + V NLPF +E ++ + F G + ++L D +
Sbjct: 378 DRANARARSFGDQAS----PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDS 433
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+ KG+ ++QY+S D+A A + +L GR + +D + P
Sbjct: 434 GRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTP 474
>gi|18490399|gb|AAH22543.1| Zinc finger CCHC-type and RNA binding motif 1 [Homo sapiens]
gi|123982552|gb|ABM83017.1| zinc finger CCHC-type and RNA binding motif 1 [synthetic construct]
gi|123997217|gb|ABM86210.1| zinc finger CCHC-type and RNA binding motif 1 [synthetic construct]
Length = 217
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|22328599|ref|NP_193122.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|48310472|gb|AAT41827.1| At4g13860 [Arabidopsis thaliana]
gi|332657937|gb|AEE83337.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 87
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A+R+ V NL TT + L++ FS +G V + +++D T +S+G+ F+ Y+S +A A
Sbjct: 1 MATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPG 123
+ MD K L+GR + V + G
Sbjct: 61 VSGMDGKELNGRRVSVKLFGIG 82
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E +L+ F +G ++EV L+KD T KS+G+AFI + S DA A+
Sbjct: 8 GKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L + T E +L++ FS GEV E +++ D T +S+G+ F+ +TS ++A AL
Sbjct: 39 SSKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASAL 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
++D ++L GR I V+ A
Sbjct: 99 TALDGQDLHGRQIRVNYA 116
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V NL + E LQ EF +FGE++ V+++ + T +S+G+ +++YT+ DA A
Sbjct: 294 SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 353
Query: 103 ESMDHKNLDGRLIYVDIA--KPG-KDRFGGY 130
E+ +DGR+I +D A +P KD+ GG+
Sbjct: 354 EAKKGAEIDGRVINLDYATGRPANKDQQGGF 384
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
+R N R+F +AS P + + V NLPF +E ++ + F G + ++L D +
Sbjct: 386 DRANARARSFGDQAS----PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDS 441
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+ KG+ ++QY+S D+A A + +L GR + +D + P
Sbjct: 442 GRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTP 482
>gi|226443342|ref|NP_001139887.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
gi|221219686|gb|ACM08504.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
Length = 221
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ L K FS +G+V +V +VKD+ T+KSKG AF+ + ++ A
Sbjct: 7 PSRSTVYVSNLPFSLTNSDLHKLFSKYGKVVKVTIVKDKETRKSKGVAFVLFLDKESAQS 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
S+++K L GR + IA
Sbjct: 67 CFRSLNNKQLFGRTVKASIA 86
>gi|51243065|ref|NP_149105.3| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Homo sapiens]
gi|114645274|ref|XP_001167603.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 4 [Pan troglodytes]
gi|397510820|ref|XP_003825785.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 1 [Pan paniscus]
gi|397510822|ref|XP_003825786.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 isoform 2 [Pan paniscus]
gi|410046827|ref|XP_003952268.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Pan troglodytes]
gi|158931154|sp|Q8TBF4.2|ZCRB1_HUMAN RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein; Short=U11/U12-31K
gi|14211667|dbj|BAB56132.1| ZCRB1 protein [Homo sapiens]
gi|48427638|tpg|DAA05498.1| TPA_exp: U11/U12 snRNP 31K [Homo sapiens]
gi|119578246|gb|EAW57842.1| zinc finger CCHC-type and RNA binding motif 1, isoform CRA_a [Homo
sapiens]
gi|119578247|gb|EAW57843.1| zinc finger CCHC-type and RNA binding motif 1, isoform CRA_a [Homo
sapiens]
gi|261861064|dbj|BAI47054.1| zinc finger CCHC-type and RNA binding motif containing protein 1
[synthetic construct]
gi|410209170|gb|JAA01804.1| zinc finger CCHC-type and RNA binding motif 1 [Pan troglodytes]
gi|410248970|gb|JAA12452.1| zinc finger CCHC-type and RNA binding motif 1 [Pan troglodytes]
gi|410294196|gb|JAA25698.1| zinc finger CCHC-type and RNA binding motif 1 [Pan troglodytes]
gi|410336591|gb|JAA37242.1| zinc finger CCHC-type and RNA binding motif 1 [Pan troglodytes]
Length = 217
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++++ L T E +L+ EF +G + EV L+KD T KS+G+AFI + S DA A +
Sbjct: 8 KLLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKE 67
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K LDG+ I V+ A
Sbjct: 68 MNGKFLDGKTIKVEQA 83
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V + + T E L++EF +G++ +V +VKD T K +GYAF+++ + D A +S
Sbjct: 106 LFVSRINYDTTESKLRREFETYGKIRKVTIVKDVATGKPRGYAFVEFDRERDMHTAYKSA 165
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
D K +DGR + VD+ + G+ G PR G
Sbjct: 166 DGKKIDGRRVLVDVER-GRTVKGWRPRRFG 194
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V NL + E + F++FGEV K++ D T +SKG+ F+++ ++ A A++
Sbjct: 2 KLYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKE 61
Query: 105 MDHKNLDGRLIYVDIAKPGKDR 126
++ N +GR I V+ AKP +DR
Sbjct: 62 LNGSNFEGRSIVVNEAKPMEDR 83
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
AS++ V NL + + + TL + FSA+G V + ++KD T +S+G+ F+ Y S +A A+
Sbjct: 3 ASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAI 62
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
+M+ + LDGR + V++A
Sbjct: 63 AAMNEQELDGRRVRVNMANS 82
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T L+ F+ FGEV ++V D ++ SKG+ F++Y + ++A +E M
Sbjct: 37 LFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKGIEGM 96
Query: 106 DHKNLDGRLIYVDIAKP 122
D K LDG +I+ + A+P
Sbjct: 97 DGKFLDGWVIFAEYARP 113
>gi|337278094|ref|YP_004617565.1| RNA-binding protein [Ramlibacter tataouinensis TTB310]
gi|334729170|gb|AEG91546.1| Candidate RNA-binding protein [Ramlibacter tataouinensis TTB310]
Length = 95
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + +Q+ FS FG V K+V D T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSFGDSEMQQAFSQFGTVGSAKVVMDRDTGRSKGFGFVEMGSAAEAQSA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGG 129
++ M + GR + V+ A+P + R GG
Sbjct: 61 IQGMHGQQHGGRDLVVNEARPMEPRTGG 88
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L + T + TL+ FS FG + E +VKD T +S+G+ F++++++ +A AL +
Sbjct: 5 KLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNA 64
Query: 105 MDHKNLDGRLIYVDIA 120
M+++ DGR+I VD A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 51/79 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ + +L ++ + +L+ F FG V + K+V D +++SKG+ F+ + +DA A+E
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M+ + L+GR I VD+++P
Sbjct: 62 EMNEQELEGRRIKVDVSRP 80
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L + T + TL++ FS FG + E +VKD T +S+G+ F++++S +A AL +
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 105 MDHKNLDGRLIYVDIA 120
M+++ DGR+I VD A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|8927581|gb|AAF82129.1|AF279289_1 testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 386
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A+
Sbjct: 2 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVR 61
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 62 DMNGKSLDGKAIKV 75
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AF+ Y + A+ A
Sbjct: 398 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFVTYMFPEHAVKAF 457
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 458 AEVDGQVFQGRMLHV 472
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLA 101
+S+I+VRN+PF +++ FS FGE+ V+L K + T +G+ F+ + ++ DA A
Sbjct: 811 SSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVDFLTKQDAKQA 870
Query: 102 LESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 871 FNTLCHSTHLYGRRLVLEWA 890
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E + F+AFG + + +K KD K + + FI + S+DDA A
Sbjct: 2 SRLIVKNLPSGMKEDRFRGLFAAFGTLTDCALKFTKD---GKFRKFGFIGFKSEDDAKAA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D + V+ K
Sbjct: 59 LTHFNKSFIDTARVSVEFCK 78
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
+ V+NL F T E TL++ F+ G V V +D+ T S G+ F++Y + A AL
Sbjct: 712 LFVKNLNFNTTEETLKEVFTKAGAVKSCTVSRKRDKAGTLLSMGFGFVEYRKPEHAQKAL 771
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ + ++DG + V I++
Sbjct: 772 KQLQGCSVDGHQLEVKISE 790
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 37 LSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQD 96
+++ + R V L + T L++ FS +GE+ E K++ D T +S+G+ F+ + S+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQ 60
Query: 97 DALLALESMDHKNLDGRLIYVDIAKP 122
A+E M+ +NLDGR I V+ A+
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 37 LSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQD 96
+++ + R V L + T L++ FS +GE+ E K++ D T +S+G+ F+ + S+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQ 60
Query: 97 DALLALESMDHKNLDGRLIYVDIAKP 122
A+E M+ +NLDGR I V+ A+
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ F +FGE+ + K++ D T +S+G+ F+ +T++ A+ +
Sbjct: 5 RCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAINA 64
Query: 105 MDHKNLDGRLIYVDIAKPGKDR 126
M+ K++DGR I V++A+ +R
Sbjct: 65 MNGKDIDGRTISVNMAQARNNR 86
>gi|301091256|ref|XP_002895817.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096594|gb|EEY54646.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 122
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS----KGYAFIQYTSQDDALLA 101
+ VRNLPF + L+ FS G V ++ ++KD+ +KS +G+AF+++ + DA +A
Sbjct: 4 VFVRNLPFGVTQEELEHVFSEIGPVRKIDVIKDKGKRKSEMLTRGFAFVKFAVESDAAVA 63
Query: 102 LESMDHKNLDGRLIYVDIA-KPGKDRFGGYPRTSGPPKQQPLSEQDEVADC 151
+E ++ + GR + +D A + GK R G P P +P ++ E D
Sbjct: 64 VEKLNKTDFQGRKMLIDYAMEKGKRR--GLPGKEKPATDEPKQDEKEQEDV 112
>gi|431901430|gb|ELK08456.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Pteropus alecto]
Length = 217
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AF+ Y + A+ A
Sbjct: 398 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLTKKPKGFAFVTYMFPEHAVKAF 457
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 458 AEVDGQVFQGRMLHV 472
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLA 101
+S+I+VRN+PF +++ FS FGE+ V+L K + T +G+ F+ + ++ DA A
Sbjct: 818 SSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVDFLTKQDAKQA 877
Query: 102 LESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 878 FNTLCHSTHLYGRRLVLEWA 897
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E + F+AFG + + +K KD K + + FI + S+DDA A
Sbjct: 2 SRLIVKNLPSGMKEDRFRGLFAAFGTLTDCALKFTKD---GKFRKFGFIGFKSEDDAKAA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D + V+ K
Sbjct: 59 LTHFNKSFIDTARVSVEFCK 78
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
+ V+NL F T E TL++ F+ G V V +D+ T S G+ F++Y + A AL
Sbjct: 719 LFVKNLNFNTTEETLKEVFTKAGAVKSCTVSRKRDKAGTLLSMGFGFVEYRKPEHAQKAL 778
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ + ++DG + V I++
Sbjct: 779 KQLQGCSVDGHQLEVKISE 797
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NL ++ + +LQ+ F+ FG V K++ D T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKD 125
+ M+ + L+GR I V+ A+P +D
Sbjct: 61 INGMNGQPLEGRAIVVNEARPRED 84
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + L++ FS FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ M+ ++L GR I V+ A+P
Sbjct: 61 INGMNGQSLGGRSIVVNEARP 81
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|261859212|dbj|BAI46128.1| RNA binding motif protein, X-linked-like 2 [synthetic construct]
Length = 392
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A+
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|258405611|ref|YP_003198353.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257797838|gb|ACV68775.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 86
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NLPF+ E ++ F A+GEV VKL++D T + +G+ F++ + D A
Sbjct: 1 MSKNIYVGNLPFSATEDEVRSAFGAYGEVTSVKLIEDRETGRPRGFGFVEMS--DGGEQA 58
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+E++D ++ GR + V+ A+P
Sbjct: 59 IENLDGQDFGGRTLKVNEARP 79
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP++ + L+ EF FG +A V + + T +KG+AFIQY+ D A AL
Sbjct: 301 RLFVRNLPYSATKEDLEAEFEPFGNLAAVHVSMSKKTGSAKGFAFIQYSDADAAERALRE 360
Query: 105 MDHKNLDGRLIYVDIAKPGK----DRFGGYPRTSGPPKQQ 140
D + GRL+++ PGK D+ + + P K+Q
Sbjct: 361 KDGQTFQGRLLHI---LPGKAKREDKLDDFELSKLPLKKQ 397
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F AFG++ V++ K ++ + ++G+AF +T+ +A A+E
Sbjct: 701 TKIIIKNLPFEATKKDVRALFGAFGQLRSVRVPK-KMDRAARGFAFADFTTPKEAESAME 759
Query: 104 SMDHKNLDGRLIYVDIAK 121
++ + +L GR + +D A+
Sbjct: 760 ALRNTHLLGRRLVLDFAE 777
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ASRI ++ LP T E L+K F G V +V++ + + ++ Y+ +DA A
Sbjct: 1 MASRIFIKGLPPTFSEEELRKHFP--GNVTDVRIFPN------RRIGYVGYSKPEDAQKA 52
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQ 140
++ + + I V++A+P K+ + PP Q+
Sbjct: 53 VKYHNKSFIRMSRISVELARPAKEPGSHEQQQPSPPAQR 91
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
+S+S+ P +++ V NL +TT +L+ F FG+V + +++D T +S+G+ FI +
Sbjct: 23 SSMSSPPGGNKLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKE 82
Query: 95 QDDALLALESMDHKNLDGRLIYVDIA 120
+ A A+E+++ + LDGR I V+ A
Sbjct: 83 EAAAPGAIEALNGQELDGREIRVNYA 108
>gi|297807131|ref|XP_002871449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317286|gb|EFH47708.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 745
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ V LP++T E L + FS FG+++EV LV D+ T+ S+G A++ Y + A A+E
Sbjct: 240 SRLFVHGLPYSTAEEELTEHFSKFGDISEVHLVLDKDTRNSRGMAYVLYLIPESAKRAME 299
Query: 104 SMDHKNLDGRLIYVDIAKP 122
+D GR +++ AKP
Sbjct: 300 KLDKLPFQGRTLHILPAKP 318
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SRI+V+N+P E L+ FS GE+ +VKL K S+ +A+I + ++ +A A+
Sbjct: 6 SRIIVKNVPKYVTEDQLRGIFSRKGEITDVKL-KRLSDGTSRQFAYIGFRNEQEAQDAIT 64
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQ 140
+ +D I V +A P PRT G ++
Sbjct: 65 YFNKSFIDTLRISVLVADPP-------PRTQGKADEK 94
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAF---GEVAEVKLVKDEITKKSKGYAFIQYTSQDDA 98
+ V+NL F T + L+K + G++ VK+++D ++S GY F+++ S + A
Sbjct: 562 LHVKNLSFKTTDEGLKKHLTGLVKQGKILSVKIIRDWKRRRSSGYGFVEFDSVETA 617
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L + T + TL + FS FG + E +VKD T +S+G+ F+++ ++ +A A++
Sbjct: 2 AKLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQ 61
Query: 104 SMDHKNLDGRLIYVDIAK 121
M++ DGRLI VD A+
Sbjct: 62 RMNNTQFDGRLIRVDHAQ 79
>gi|335423511|ref|ZP_08552532.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
gi|334891336|gb|EGM29584.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
Length = 90
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + T++ L+ F AFGEV+ K++ D T +S+G+ F++ +DA A+E M
Sbjct: 3 IYVGNLSWNTNDDELRGAFEAFGEVSSAKVIMDRETGRSRGFGFVEMPDDNDAKQAIEGM 62
Query: 106 DHKNLDGRLIYVDIA 120
++K+L GR + V+ A
Sbjct: 63 NNKDLGGRTLRVNEA 77
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L + T + TL++ FS FG + E +VKD T +S+G+ F++++S +A AL +
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 105 MDHKNLDGRLIYVDIA 120
M+++ DGR+I VD A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 161
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
AS++ V NL + + + TL + FSA+G V + ++KD T +S+G+ F+ Y S +A A+
Sbjct: 3 ASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAI 62
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
+M+ + LDGR + V++A
Sbjct: 63 AAMNEQELDGRRVRVNMANS 82
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
NR +P NL +S ++ V +L F E +++ F FGE+ V L +D +T
Sbjct: 96 NRLHPGDGNLNLPPGVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMT 155
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVD-IAKPGKDRF 127
+SKGYAF+QY +DA +ALE M+ L GR + V+ + + G R+
Sbjct: 156 GRSKGYAFVQYKRAEDAKMALEQMEGFELAGRTLRVNTVHEKGSTRY 202
>gi|361128698|gb|EHL00628.1| putative Cold-inducible RNA-binding protein [Glarea lozoyensis
74030]
Length = 170
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T E+ L+++F FG V E +VKD T +S+G+ F++Y + DA A+
Sbjct: 2 SKLFIGGLAWHTDENALRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQESDAEAAIT 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M++ DGR I VD A
Sbjct: 62 AMNNIEFDGRTIRVDKA 78
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
Length = 175
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + L++ F FG VA K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ M+ + L GR I V+ A+P
Sbjct: 61 INGMNGQPLGGRSIVVNEARP 81
>gi|308274216|emb|CBX30815.1| Putative RNA-binding protein rbpA [uncultured Desulfobacterium sp.]
Length = 94
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL T E TL+ F FG V VK++KD T K KG+ FI+ S +A A++++
Sbjct: 3 IYIGNLSIATTEETLKTLFVEFGNVETVKVIKDNFTGKPKGFGFIEMPSNSEADQAIKAL 62
Query: 106 DHKNLDGRLIYVDIAKPG 123
+ K +DG I V+ A PG
Sbjct: 63 NGKRIDGNNIKVNPADPG 80
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 182
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
AS++ V NL + + + TL + FSA+G V + ++KD T +S+G+ F+ Y S +A A+
Sbjct: 3 ASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAI 62
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
+M+ + LDGR + V++A
Sbjct: 63 AAMNEQELDGRRVRVNMANS 82
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ +++++ +E
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ +++++ A+E
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 16 FANSLTNRE-NPCFRTFNLRASLSNY--PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAE 72
FAN+ TN NP R + S + P + + + NLPF+ E+ +Q+ FS G +
Sbjct: 308 FANARTNAGGNPRERADSRAKSFGDQTSPESDTLFLGNLPFSADENAVQELFSKHGSILG 367
Query: 73 VKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
++L D + + KG+ ++Q++S D+A ALE+ +L GR I +D + P
Sbjct: 368 IRLPTDPDSGRPKGFGYVQFSSVDEARAALEAEYGADLGGRAIRIDFSTP 417
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + NL + E L+ EF FGE+ ++V D + +S+G+ ++++ + +DA+ A
Sbjct: 232 SANLFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFGYVEFANVEDAVKAH 291
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQ 145
+ LDGR + +D A + GG PR + + +Q
Sbjct: 292 AAKKDAELDGRKLNLDFAN-ARTNAGGNPRERADSRAKSFGDQ 333
>gi|296273514|ref|YP_003656145.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
gi|296097688|gb|ADG93638.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
Length = 92
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V N+ + T E L FS +GEV+ VKL+ D T ++KG+ F+ AL A+E
Sbjct: 2 QIYVGNMSYGTTEEGLTTLFSQYGEVSSVKLITDRDTGRAKGFGFVAMNDDSAALKAIEE 61
Query: 105 MDHKNLDGRLIYVDIAKPGKDR 126
++ K DGR + ++ AKP +++
Sbjct: 62 LNGKEYDGRTLRINEAKPKEEK 83
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 51/79 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ + +L ++ + +L+ F FG V + K+V D +++SKG+ F+ + +DA A+E
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 104 SMDHKNLDGRLIYVDIAKP 122
M+ + L+GR I VD+++P
Sbjct: 62 EMNEQELEGRRIKVDVSRP 80
>gi|440791001|gb|ELR12257.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 288
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 25/118 (21%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L F T+E TL+ F FG + ++LV+D +T KSKGYAF++Y + DA A M
Sbjct: 53 VFVGRLDFVTNEETLRTTFERFGPIRHLRLVRDIVTGKSKGYAFVEYEHESDAHAAYRDM 112
Query: 106 DHKNLDGRLIYVDIAKP---------------------GKDRFGGYPRTSGPPKQQPL 142
K++D + V++ + G+ RFGG R P +QPL
Sbjct: 113 HGKDIDQARVLVEMERERTMAGWVPRRLGGGLGGKKESGQIRFGGRDR----PWRQPL 166
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + L++ FS FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ M+ ++L GR I V+ A+P + R
Sbjct: 61 INGMNGQSLGGRSIVVNEARPMEAR 85
>gi|358372076|dbj|GAA88681.1| pre-rRNA processing protein Mrd1 [Aspergillus kawachii IFO 4308]
Length = 825
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
L++R+ VRNL + T E L+ F+ FG + E+ + D SKG+A+IQY D A+ A
Sbjct: 299 LSARLFVRNLAYDTSESDLEPLFAPFGRIEEIHVAFDTRVNTSKGFAYIQYLDADAAVEA 358
Query: 102 LESMDHKNLDGRLIYV 117
+++D K+ GRL+++
Sbjct: 359 YKNLDGKHFQGRLMHI 374
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 760
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 761 ALKNTHLLGRKLVLEFA 777
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V L + T + +L+ F+ FGEV + K++ D T +S+G+ F+ + + A A
Sbjct: 33 MSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFNDEGAASAA 92
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+ MD K+L+GR I V++A
Sbjct: 93 ISEMDGKDLNGRNIRVNVAN 112
>gi|291286869|ref|YP_003503685.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884029|gb|ADD67729.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 89
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL ++T+E + FS GEV V+++ D T +SKG+ F++ + D A A++ +
Sbjct: 3 IYVGNLSYSTNEDDISALFSKIGEVDSVRIITDRDTGRSKGFGFVEMANSDQAKAAIDKL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ LDGR + V+ AKP
Sbjct: 63 NETELDGRNLTVNEAKP 79
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 7 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 66
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
A+E M+ K LDGR I V+ A+
Sbjct: 67 XXXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 7 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 66
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
A+E M+ K LDGR I V+ A+
Sbjct: 67 XXXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L + T EH +++EF A+G + V+LV D+ T K +GYAFI+Y D A +
Sbjct: 141 LFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQA 200
Query: 106 DHKNLDGRLIYVDIAKPGKD-------RFG---GYPRTSGPPKQQPLSEQDE 147
D + +D R + VD+ + G+ R G G R G +Q LS +D+
Sbjct: 201 DGRKVDNRRVLVDVER-GRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQ 251
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T TL++ F FGEV +V++V D ++ SKG+ +++Y + +DA ++ M
Sbjct: 46 VFVTGLNKRTTSETLREAFKKFGEVKQVRVVADRVSGYSKGFGYVRYATSEDAAKGIQGM 105
Query: 106 DHKNLDGRLIYVDIAKP 122
D K L+G +++ + A+P
Sbjct: 106 DGKFLEGWIVFAEYARP 122
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V L + T ++ L+ +F FG V E +VKD T +S+G+ F++Y + DA A+
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIA 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+MD + DGR + VD A
Sbjct: 62 NMDGQEFDGRRVRVDKA 78
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L + T EH +++EF A+G + V+LV D+ T K +GYAFI+Y D A +
Sbjct: 141 LFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQA 200
Query: 106 DHKNLDGRLIYVDIAK 121
D + +D R + VD+ +
Sbjct: 201 DGRKVDNRRVLVDVER 216
>gi|406964974|gb|EKD90666.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 118
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 54/87 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + +PF+ L++ F +G V+ +++ D+ T +SKG+AF++ + +A A++
Sbjct: 2 TKLFIGGIPFSLTNEKLKELFEKYGTVSSAQIIMDKYTNQSKGFAFVEMPNDTEAQTAIK 61
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGY 130
+D L+GR I V +A+P +D GGY
Sbjct: 62 ELDGFGLEGRKIGVSVARPREDNRGGY 88
>gi|320582206|gb|EFW96424.1| hypothetical protein HPODL_2081 [Ogataea parapolymorpha DL-1]
Length = 256
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L +T +E L+++F+ FGE+ ++++V+D T KS+GYAFI Y S+ DA LA +
Sbjct: 103 VFVGRLDYTVNEIELREKFAQFGEIDQIRVVRDTNTGKSRGYAFILYKSESDAKLAFQKG 162
Query: 106 DHKNLDGRLIYVDIAK 121
+ + R + VDI +
Sbjct: 163 NRMVIKDRAVIVDIER 178
>gi|390596289|gb|EIN05691.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 779
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ +RNL FT E L++ F FG +++V + D TK+SKG A+I++ DA+ A +
Sbjct: 261 SRLFLRNLAFTCTEADLEEHFRRFGAISQVHIPLDHATKQSKGLAYIKFAKAQDAVDAYD 320
Query: 104 SMDHKNLDGRLIYV 117
++D + GRL+++
Sbjct: 321 ALDKTSFQGRLLHI 334
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++++V+N+PF + +++ F A G++ V+L K + +S+G+AF+ + S+ +A A E
Sbjct: 660 TKMIVKNVPFEATKKDIRELFGAHGQLKSVRLPK-KFDHRSRGFAFLDFVSRHEAENAYE 718
Query: 104 SMDHKNLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 719 ALKHTHLLGRHLVLEWA 735
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ +RN+P+T E L++ FS G ++EV D +TKK KG+AF+ Y ++A+ AL
Sbjct: 397 SGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSAL 456
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
+D + GR+++V ++ K++ P G
Sbjct: 457 AQLDGQTFQGRVLHVMASRLKKEKADQGPDAPG 489
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S+I+VRN+PF L++ F FGE+ V+L K I +G+ FI + ++ DA A
Sbjct: 804 SKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFS 863
Query: 104 SMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 864 ALCHSTHLYGRRLVLEWA 881
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK--DEITK-KSKGYAFIQYTSQDDAL 99
S + ++NL F T E TLQK FS G V + K D+ K S GY F+QY + + A
Sbjct: 700 GSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQ 759
Query: 100 LALESMDHKNLDGRLIYVDIAK 121
A+ + H +D + V I++
Sbjct: 760 KAMRQLQHCTVDEHQLEVKISE 781
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E +K F+ FG + + +K KD K + + F+ + +++DA A
Sbjct: 2 SRLIVKNLPNGMKEERFRKMFADFGTLTDCALKFTKD---GKFRKFGFVGFKTEEDAQKA 58
Query: 102 LESMDHKNLDGRLIYV----DIAKPGKDR 126
L+ + +D + V D P K R
Sbjct: 59 LKHFNKSFVDTSRVTVELCTDFGDPNKAR 87
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS +GE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS +GE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+ +RNLPF E L+K F+ FG V+EV +V D KG A++Q+ DA AL
Sbjct: 246 ARLFIRNLPFDAKEGDLRKTFAPFGRVSEVHIVTDTRKLTGKGLAYVQFVEPADAEKALL 305
Query: 104 SMDHKNLDGRLIYVDIAKPGK-DRFGGYPRTSGPPKQQ 140
+D ++ GRL+++ A K + Y + P K+Q
Sbjct: 306 ELDGRDFQGRLMHILPASEKKVQKLSEYELSKLPLKKQ 343
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V+L K + ++G+AF ++ + +A A+E
Sbjct: 639 TKIVIKNLPFEATKKDIRALFGAYGQLRTVRLPK-KFDNSARGFAFAEFVTPKEAENAME 697
Query: 104 SMDHKNLDGRLIYVDIAK 121
++ + +L GR + +D A+
Sbjct: 698 ALSNTHLLGRRLVLDFAE 715
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L + T + L+++F FG V E +VKD T +S+G+ F++Y+S ++A A++
Sbjct: 2 AKLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMD 61
Query: 104 SMDHKNLDGRLIYVDIA---KPGKDRF 127
+M+ DGR I VD A + G+ R+
Sbjct: 62 NMNDVEFDGRRIRVDKASDRRQGRGRW 88
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +++L FS +GEV E K++ D T++S+G+ F+ +++++ A+E
Sbjct: 9 RCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|261188230|ref|XP_002620531.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239593278|gb|EEQ75859.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239609317|gb|EEQ86304.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ER-3]
gi|327354414|gb|EGE83271.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ATCC
18188]
Length = 825
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 25 NPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS 84
NP + + A++ R+ VRNL + E L+ FS FG++ EV + D KS
Sbjct: 278 NPSDKNESFDANIGQLRETGRLFVRNLLYNASESDLESLFSPFGKIDEVHVAFDTRHSKS 337
Query: 85 KGYAFIQYTSQDDALLALESMDHKNLDGRLIYV 117
KG+A++QY + A+ A +++D K GRL+++
Sbjct: 338 KGFAYVQYADPEAAIQAFKTLDGKVFQGRLLHI 370
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++I+++NLPF + ++ FSA+G++ V+ V + ++G+AF + S +A A+
Sbjct: 701 GTKILIKNLPFQATKKDIRNLFSAYGKLRSVR-VPQKFDGTARGFAFADFVSAREAENAM 759
Query: 103 ESMDHKNLDGRLIYVDIA 120
+++ + +L GR + +D A
Sbjct: 760 DALKNTHLLGRRLVLDFA 777
>gi|365153971|ref|ZP_09350405.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
gi|158605004|gb|EAT99377.3| 31 kDa ribonucleoprotein, (RNA-binding proteinRNP-T) (RNA-binding
protein 1/2/3) (AtRBP33) (RNA-binding proteincp31)
[Campylobacter concisus 13826]
gi|363650683|gb|EHL89770.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
Length = 81
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + T E L++ F+ FGEV K+VKD T +SKG+ F++ ++ A++++
Sbjct: 3 IYVGNLSYRTTEAELKEAFAQFGEVRRAKIVKDRETDRSKGFGFVEMDDANEGQKAIDAL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ K L GR + V+ A+P
Sbjct: 63 NEKELGGRTLRVNEARP 79
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T +H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 1 REEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 60
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
A+E M+ K LDGR I V+ A+
Sbjct: 61 XXXAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + L++ F +G V E +VKD T +S+G+ F++++S +A A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 104 SMDHKNLDGRLIYVDIA--KPGKDRF-----GGYPRTSGPP 137
+M+++ DGR I VD A +P ++ GGY ++ G P
Sbjct: 62 AMNNQEFDGRTIRVDKASERPARNNGGFHGRGGYNQSEGAP 102
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L F T E +L+ FS +G + V + ++ T +S+G+ F+ + + DDA ALE
Sbjct: 5 GKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALE 64
Query: 104 SMDHKNLDGRLIYVDIA 120
M+ K++DGR I VD A
Sbjct: 65 GMNGKSVDGRTIRVDEA 81
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|406866241|gb|EKD19281.1| glycine-rich RNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 423
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 26 PCFR---TFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
P FR + N+ +N + + + L + T E+ L+++F FG V E +VKD T
Sbjct: 139 PLFRRRQSNNIVVQSTNIIITTDNTLNGLAWHTDENALRQKFEEFGAVEEAVVVKDRDTG 198
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
+S+G+ F++Y S+ DA A+ +M++ DGR I VD A
Sbjct: 199 RSRGFGFVRYGSEADAEAAITAMNNIEFDGRTIRVDKA 236
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L ++ E +L+ FS+FGEVAEV++ D+ + +S+G+ F+ + + DAL A ++
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 105 MDHKNLDGRLIYVDIA 120
MD K L GR + + A
Sbjct: 102 MDGKGLLGRPLRISFA 117
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + + L+ F +GEV+ K++ D+ + +SKG+ F++ S++DA A++ M
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAIKEM 79
Query: 106 DHKNLDGRLIYVDIAKP-GKDRFGGYPRTSGPPKQQ 140
++ GR I V+ A+P + GG+ R G +Q
Sbjct: 80 HDSDIKGRQIVVNEARPRNESNNGGFRRNDGFGDRQ 115
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLPFT+ E L+K FS +G ++++ D +TKK KG+AF+ Y + A+ A
Sbjct: 405 SGRLFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFVTYMIPEHAVKAY 464
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR++++
Sbjct: 465 AELDGQVFQGRMMHL 479
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E +K F+AFG + + +K KD K + + FI Y S+D+A +A
Sbjct: 2 SRLIVKNLPNGMKEERFRKLFAAFGTLTDCCLKFTKD---GKFRKFGFIGYKSEDEAQMA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D I V++ K
Sbjct: 59 LNHFNRSFIDTSRITVELCK 78
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 826 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAF 885
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 886 NALCHSTHLYGRRLVLEWA 904
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ ++NL F T E TL++ FS G V + K + S G+ F++Y + A AL
Sbjct: 726 LFIKNLNFATTEDTLRETFSKVGAVKSCTISKKKDKAGALLSMGFGFVEYKKPEGAQKAL 785
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ +DG + V I++
Sbjct: 786 RRLQGCTVDGHKLEVKISE 804
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 84
Query: 106 DHKNLDGRLIYVDIAKPG 123
D + LDGR + V +A+ G
Sbjct: 85 DGRMLDGRELRVQMARYG 102
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L + + E +++EF ++G + V LV D++T K KGYAFI+Y D A +
Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199
Query: 106 DHKNLDGRLIYVDIAK 121
D + +DGR + VD+ +
Sbjct: 200 DGQKIDGRRVLVDVER 215
>gi|398340223|ref|ZP_10524926.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418677162|ref|ZP_13238439.1| hypothetical protein LEP1GSC044_1081 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418685558|ref|ZP_13246734.1| hypothetical protein LEP1GSC064_3119 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418694370|ref|ZP_13255408.1| hypothetical protein LEP1GSC081_2699 [Leptospira kirschneri str.
H1]
gi|418740120|ref|ZP_13296500.1| hypothetical protein LEP1GSC122_1895 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421089500|ref|ZP_15550307.1| hypothetical protein LEP1GSC131_4488 [Leptospira kirschneri str.
200802841]
gi|421109387|ref|ZP_15569908.1| hypothetical protein LEP1GSC082_4090 [Leptospira kirschneri str.
H2]
gi|421130284|ref|ZP_15590479.1| hypothetical protein LEP1GSC018_3937 [Leptospira kirschneri str.
2008720114]
gi|400322475|gb|EJO70332.1| hypothetical protein LEP1GSC044_1081 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|409957877|gb|EKO16780.1| hypothetical protein LEP1GSC081_2699 [Leptospira kirschneri str.
H1]
gi|410001748|gb|EKO52341.1| hypothetical protein LEP1GSC131_4488 [Leptospira kirschneri str.
200802841]
gi|410005576|gb|EKO59366.1| hypothetical protein LEP1GSC082_4090 [Leptospira kirschneri str.
H2]
gi|410358386|gb|EKP05554.1| hypothetical protein LEP1GSC018_3937 [Leptospira kirschneri str.
2008720114]
gi|410740166|gb|EKQ84888.1| hypothetical protein LEP1GSC064_3119 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410752706|gb|EKR09679.1| hypothetical protein LEP1GSC122_1895 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 86
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NL + +E TL F A G V VK+V D+ + KSKG+ F++ ++++A A
Sbjct: 1 MSVNIYVGNLSYDLNEGTLGDLFRAHGTVNSVKIVMDQYSGKSKGFGFVEMPNKEEADKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRF 127
++ +D KN+ R + V++AKP +RF
Sbjct: 61 IKDLDGKNVLTRNLKVNVAKPKNERF 86
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E TL + F FG V VK+++D IT K KG+ F+ ++ ++ALLA+ S+
Sbjct: 532 IFVYNLAPDTEESTLWQLFGPFGAVQTVKVIRDPITSKCKGFGFVTMSNYEEALLAIHSL 591
Query: 106 DHKNLDGRLIYVD 118
+ NL R++ V
Sbjct: 592 NGFNLGNRVLQVS 604
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 49/86 (56%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ +++ LP + ++ FS+ GEV KLV+++ + +S GYAF+++ DA A++
Sbjct: 120 TNLIINYLPPNMSQEEVRALFSSIGEVESCKLVREKTSGESLGYAFVKFYDPLDAGKAIK 179
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGG 129
+++ L + + V +A+P + G
Sbjct: 180 TLNGLRLQNKTVKVSLARPSSEAIKG 205
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ + + LP + L+K FSA G + +++ D T S+G AFI+Y + +A A+
Sbjct: 205 GANLYICGLPRKMTQPELEKLFSACGHIITARILYDTKTGLSRGVAFIRYDQRTEAEAAI 264
Query: 103 ESMD 106
++
Sbjct: 265 RKLN 268
>gi|431931272|ref|YP_007244318.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829575|gb|AGA90688.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 94
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + E L++ F AFGE++ V ++ D+ T +SKG+ F++ + +A A++++
Sbjct: 3 IYVGNLAYGVTEDELREAFGAFGEISSVSVITDKFTGQSKGFGFVEMPNNSEADAAIKAL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
+ L GR I V+ A+P +R PR+ G ++
Sbjct: 63 NETPLKGRNIRVNEARPRAER---PPRSGGGARR 93
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 49/76 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ + N+ + T L++ F +GE+ ++ + +D TK+SKG+ F++Y S+ DA A++ M
Sbjct: 16 LKIDNISYQTTPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYYSRRDAEYAMDRM 75
Query: 106 DHKNLDGRLIYVDIAK 121
D + +DGR I V +A+
Sbjct: 76 DGRWIDGREIRVALAR 91
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
+ Y A ++ V L + + +L+ F FG+V + K++ + T +SKG+ F+ + +D+
Sbjct: 14 ARYMRACKLYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFKREDE 73
Query: 98 ALLALESMDHKNLDGRLIYVDIAKPGKD 125
A ALESMD K+ GR I VD AK K+
Sbjct: 74 AKEALESMDGKDFAGRSIRVDYAKTQKE 101
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L + + E +++EF ++G + V LV D++T K KGYAFI+Y D A +
Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199
Query: 106 DHKNLDGRLIYVDIAK 121
D + +DGR + VD+ +
Sbjct: 200 DGQKIDGRRVLVDVER 215
>gi|45198297|ref|NP_985326.1| AFL224Wp [Ashbya gossypii ATCC 10895]
gi|44984184|gb|AAS53150.1| AFL224Wp [Ashbya gossypii ATCC 10895]
gi|374108554|gb|AEY97460.1| FAFL224Wp [Ashbya gossypii FDAG1]
Length = 206
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 3 AAAAATVSYPQPMFANSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQK 62
A + T PQP A + P R+ + + L+ I + LP HE L
Sbjct: 38 AEPSVTDEQPQPAAAGHTILPQQPARRS-GAKKQAARTDLSGIIYISRLPHGFHERELST 96
Query: 63 EFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
F+ FG++ +V+L +++ T S+ YAFI++ + DDA++A E+M + L G L+ V +
Sbjct: 97 YFAQFGDLKQVRLARNKKTGNSRHYAFIEFANPDDAVVAQETMHNYLLMGHLLQVSVLPK 156
Query: 123 GK 124
G+
Sbjct: 157 GR 158
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 84
Query: 106 DHKNLDGRLIYVDIAKPG 123
D + LDGR + V +A+ G
Sbjct: 85 DGRMLDGRELRVQMARYG 102
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + L++ F +G V E +VKD T +S+G+ F++++S +A A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 104 SMDHKNLDGRLIYVDIA--KPGKDRF-----GGYPRTSGPP 137
+M+++ DGR I VD A +P ++ GGY ++ G P
Sbjct: 62 AMNNQEFDGRTIRVDKASERPARNNGGFHGRGGYNQSEGAP 102
>gi|291228234|ref|XP_002734084.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)-like
[Saccoglossus kowalevskii]
Length = 192
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T E T++K FS +GE+ +KLV+D +T SKGYAF++Y SQ A A
Sbjct: 56 VFVARLNLNTTEETIEKTFSRYGEIKRLKLVRDIVTGFSKGYAFVEYCSQKSAERAERKA 115
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPR 132
D +DG ++VD+ K + G PR
Sbjct: 116 DKLIVDGSELFVDLECERKLK-GWIPR 141
>gi|262199927|ref|YP_003271136.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262083274|gb|ACY19243.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 207
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFG-EVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
+ S++ V NL ++T E L+ F G EV V ++ D T +S+G+AF+Q S+D A
Sbjct: 1 MGSKLYVGNLSYSTTEEALRSVFEEGGKEVRSVAIILDRETGRSRGFAFVQMASEDAARE 60
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+ES+D + LDGR + + A+
Sbjct: 61 AMESLDGRELDGRQMRITEAR 81
>gi|34785785|gb|AAH57481.1| Cirbp protein [Danio rerio]
Length = 121
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 49/74 (66%)
Query: 47 MVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMD 106
M L + T E +L++ FS +G +A+V +++D T +S+G+ F+ + + +DA A+ +M+
Sbjct: 1 MFGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMN 60
Query: 107 HKNLDGRLIYVDIA 120
K +DGR+I VD A
Sbjct: 61 GKQVDGRMIRVDEA 74
>gi|328852591|gb|EGG01736.1| hypothetical protein MELLADRAFT_23270 [Melampsora larici-populina
98AG31]
Length = 510
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 16 FANSLTNRENPCFRTFNLRASLSNYPLAS-RIMVRNLPFTTHEHTLQKEFSAFGEVAEVK 74
FAN E R + SN ++S +++V+N+PF T + L++ F +FG++ V+
Sbjct: 390 FANRGKEEEEKDSRNGGIITKESNDGISSTKLLVKNVPFETSKQELRELFGSFGKLKSVR 449
Query: 75 LVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
L K ++ +K++G+ FI+YT++ +A A++S+ H +L GR + + A
Sbjct: 450 LPK-KLDRKTRGFGFIEYTTKKEAEEAMKSLKHTHLLGRHLVISYA 494
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ +RNLPF+ E L FS +G V++V + + +K KG A++ + DAL A +
Sbjct: 17 RLFLRNLPFSLLEEDLMSLFSTYGAVSQVHIPLNR-ERKQKGVAYVSFERSSDALEAFKQ 75
Query: 105 MDHKNLDGRLIYV 117
+D ++ GRL+++
Sbjct: 76 LDQRDFQGRLLHI 88
>gi|293332727|ref|NP_001168409.1| uncharacterized protein LOC100382178 [Zea mays]
gi|223948081|gb|ACN28124.1| unknown [Zea mays]
gi|413950595|gb|AFW83244.1| hypothetical protein ZEAMMB73_012333 [Zea mays]
Length = 448
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 33 LRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQY 92
+RA+ P ++ +R L + T +L+ FSA+G++ E ++ D+ T +SKGY F+ +
Sbjct: 64 VRAAADRDPALRKLFIRGLGWETTSDSLRAIFSAYGDLEEAVVITDKSTGRSKGYGFVTF 123
Query: 93 TSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDEVADC 151
D A+LAL+ K +DGR+ +A G GP P S VAD
Sbjct: 124 RHADSAVLALKE-PSKKIDGRMTVTQLAAAGS--------AGGPSVGAPGSGGAPVADV 173
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V N+P L F+++GE+ E L D+ T K +G+A Y + + A +L
Sbjct: 177 KIFVGNVPADMSSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVD 236
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGP 136
K +D + +A GK G + SGP
Sbjct: 237 -SVKVIDSHQLVCKLAIDGKKGKQGQSQQSGP 267
>gi|159164312|pdb|2E5H|A Chain A, Solution Structure Of Rna Binding Domain In Zinc Finger
Cchc-Type And Rna Binding Motif 1
Length = 94
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 14 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 73
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 74 CTRAINNKQLFGRVIKASIA 93
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|67516279|ref|XP_658025.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|74681510|sp|Q5BGA9.1|MRD1_EMENI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|40747364|gb|EAA66520.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|259489335|tpe|CBF89520.1| TPA: Multiple RNA-binding domain-containing protein 1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGA9] [Aspergillus
nidulans FGSC A4]
Length = 819
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
++ N +++R+ VRNL + T E L+ FS FG++ E+ + D SKG+A++QY
Sbjct: 287 NIENIRISARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADP 346
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A ++D K GRL+++
Sbjct: 347 DAAVEAYRNLDGKIFQGRLLHI 368
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ F A+G++ V++ K + + ++G+ F + S +A A++
Sbjct: 697 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADFVSAREAENAMD 755
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + +L GR + ++ A
Sbjct: 756 ALKNTHLLGRRLVLEFA 772
>gi|13548328|emb|CAC35875.1| putative protein [Arabidopsis thaliana]
Length = 768
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
A R+ V LP++T E L + FS FG+++EV LV D+ T+ +G AF+ Y + A +A+
Sbjct: 254 AGRLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKMAM 313
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
+ +D GR +++ AKP
Sbjct: 314 DKLDKLPFQGRTLHILPAKP 333
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAF---GEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ V+NL F T + L+K + G++ VK+++D ++S GY F+++ S + A
Sbjct: 577 LHVKNLSFKTTDEGLKKHLTGVVKQGKILSVKIIRDWTRRRSSGYGFVEFDSVETATSVY 636
Query: 103 ESM--DHKNLDGRLIYVDIAK--------PGKDRFGGYPRTSGPPK 138
+ + LDG + ++ ++ G D+ + R P K
Sbjct: 637 RDLPVEGNVLDGHSLILNFSENKRSETVGEGSDKVTKFKRVGLPLK 682
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 25 NPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS 84
N F L A+ N SRI+V+N+P E L+ FS GE+ +VKL K +S
Sbjct: 13 NSNFLERALLANPKNVSSGSRIIVKNVPKYVTEDQLRGIFSEKGEITDVKL-KRLSDGRS 71
Query: 85 KGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+ +A+I + S+ A A+ + I V +A P
Sbjct: 72 RQFAYIGFRSEQKAQDAITYFNKNFKHSHQISVLVADP 109
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + LQ+ F FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ M+ + L GR + V+ A+P + R
Sbjct: 61 INGMNGQPLGGRSVVVNEARPMEAR 85
>gi|209878256|ref|XP_002140569.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556175|gb|EEA06220.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 244
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+++R+L F T +++ F FG++ +V L D TK+ +G+ F++Y + DAL A++ M
Sbjct: 15 LLIRSLRFETPPSLVRRVFERFGQIRDVYLPVDFHTKRPRGFGFVEYVEESDALAAIQRM 74
Query: 106 DHKNLDGRLIYVDIAKPGK 124
+ NLDG I+V A+ G+
Sbjct: 75 NGANLDGSQIHVTFAQEGR 93
>gi|444723044|gb|ELW63709.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 1033
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 29 RTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYA 88
RT + + R+ VRNLP+T+ E L+K FS +G V+E+ D +TKK KG+A
Sbjct: 489 RTLGEDEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKYGPVSELHYPIDSLTKKPKGFA 548
Query: 89 FIQYTSQDDALLALESMDHKNLDGRLIYV 117
F+ + + A+ A +D + GR+++V
Sbjct: 549 FVTFMFPEHAVKAYAQVDGQVFQGRMLHV 577
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ FS FG + + +K KD K + + FI + S+++A A
Sbjct: 47 SRLIVKNLPNGMKEERFRQLFSTFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQTA 103
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D I V+ K
Sbjct: 104 LNHFNKSFIDTSRITVEFCK 123
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ ++NL F T E TL+K FS G V + + + S G+ F++Y + A AL
Sbjct: 836 LFIKNLNFDTAEETLRKVFSKVGMVKSCSISRKKNKAGALLSMGFGFVEYKKPEQAQKAL 895
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ + +DG + V I++
Sbjct: 896 KQLQGHVVDGHKLEVRISE 914
>gi|255944269|ref|XP_002562902.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587637|emb|CAP85680.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%)
Query: 50 NLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKN 109
L + T + TL++ F FGE+ E +VKD T++S+G+ F+++ + +A AL +M+++
Sbjct: 5 GLSWHTSDDTLREGFQQFGEIQEAIVVKDRATQRSRGFGFVRFATDAEADAALGAMNNQE 64
Query: 110 LDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLS 143
DGR+I VD A R G + G QP S
Sbjct: 65 FDGRVIRVDKAFDRPQRSEGGFQGRGGYNSQPQS 98
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
RE C + L L + I V NL F E L+ F +GEV+ V ++ D T
Sbjct: 38 REASCL----VGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETG 93
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+S+G+AF++ + A A+E+++ +DGR + V+ A+P
Sbjct: 94 RSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARP 133
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
RE C + L L + I V NL F E L+ F +GEV+ V ++ D T
Sbjct: 38 REASCL----VGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETG 93
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+S+G+AF++ + A A+E+++ +DGR + V+ A+P
Sbjct: 94 RSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARP 133
>gi|349585036|ref|NP_001073493.2| probable RNA-binding protein 46 [Danio rerio]
Length = 523
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAF--GEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ VRNL +T E TL+ EFS G V VK + D YAFI + +++DAL ALE
Sbjct: 235 LYVRNLMLSTTEETLRSEFSQLKPGSVERVKKLTD--------YAFIHFYNREDALTALE 286
Query: 104 SMDHKNLDGRLIYVDIAKP----GKDRFG 128
SM+ K +DG I V +AKP G RFG
Sbjct: 287 SMNGKVIDGSPIEVTLAKPASKDGNKRFG 315
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V +P +E L F G + E +L+ E + +++GYAF+ YT+++ A A++ +
Sbjct: 60 VFVGKIPRDMYEDELVPVFEQAGHIYEFRLMM-EFSGENRGYAFVMYTTREKAQRAIQLL 118
Query: 106 DHKNLD-GRLIYVDIA 120
D+ + G+ I V ++
Sbjct: 119 DNYEIRPGKFIGVCVS 134
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
RE C + L L + I V NL F E L+ F +GEV+ V ++ D T
Sbjct: 38 REASCL----VGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETG 93
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+S+G+AF++ + A A+E+++ +DGR + V+ A+P
Sbjct: 94 RSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARP 133
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 53/78 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + + ++ E +L++ F+ +GEV E +++ D T +S+G+ F+ +TS + A A+
Sbjct: 39 SSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAASSAI 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
+++D ++L GR++ V+ A
Sbjct: 99 QALDGRDLHGRVVKVNYA 116
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDNRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGALLDGRELRVQMARYGR 94
>gi|195042706|ref|XP_001991484.1| GH12037 [Drosophila grimshawi]
gi|193901242|gb|EDW00109.1| GH12037 [Drosophila grimshawi]
Length = 918
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
S N + RI RNL +TT E LQK F FG V EV L D++T++ KG+ + +
Sbjct: 352 SEENISESGRIFFRNLAYTTTEEELQKLFERFGPVVEVNLPVDKVTRQIKGFGTVTFMIP 411
Query: 96 DDALLALESMDHKNLDGRLIYVDIAKPGKD 125
++AL A +D + GRL+++ PGK+
Sbjct: 412 ENALKAFNDLDGTDFHGRLLHL---LPGKE 438
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS--KGYAFIQYTSQDDALL 100
++I+VRN+PF +++ F AFGE+ +++ K + +G+ F+ YT++ DA
Sbjct: 787 GTKILVRNIPFQAQYREVREIFKAFGELTSLRIPKKMTPGEDAHRGFGFVDYTTKADAKR 846
Query: 101 ALESMD-HKNLDGRLIYVDIA 120
A +++ +L GR + ++ A
Sbjct: 847 AFDALSASTHLYGRRLVLEWA 867
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK-----SKGYAFIQYTSQDDALL 100
I +RNL F T T++ F+ G V V++ K + + S GY FIQ+ A
Sbjct: 685 IFLRNLNFKTVMETVRAHFAHLGTVHTVEIAKRKDPQNPRQLNSLGYGFIQFKKAAVASQ 744
Query: 101 ALESMDHKNLDGRLI 115
AL+ M LDG L+
Sbjct: 745 ALKDMQLTQLDGNLV 759
>gi|186521407|ref|NP_001119193.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332003956|gb|AED91339.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 690
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
A R+ V LP++T E L + FS FG+++EV LV D+ T+ +G AF+ Y + A +A+
Sbjct: 226 AGRLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKMAM 285
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
+ +D GR +++ AKP
Sbjct: 286 DKLDKLPFQGRTLHILPAKP 305
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
SRI+V+N+P E L+ FS GE+ +VKL K +S+ +A+I + S+ A A+
Sbjct: 3 VSRIIVKNVPKYVTEDQLRGIFSEKGEITDVKL-KRLSDGRSRQFAYIGFRSEQKAQDAI 61
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGG 129
+ I V +A P R G
Sbjct: 62 TYFNKNFKHSHQISVLVADPPPRRTQG 88
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAF---GEVAEVK-LVKDEITKKSKGYAFIQYTSQDDALLA 101
+ V+NL F T + L+K + G++ VK +++D ++S GY F+++ S + A
Sbjct: 537 LHVKNLSFKTTDEGLKKHLTGVVKQGKILSVKQIIRDWTRRRSSGYGFVEFDSVETATSV 596
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+ LDG + ++ ++
Sbjct: 597 YRDLPGNVLDGHSLILNFSE 616
>gi|145345423|ref|XP_001417211.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577438|gb|ABO95504.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A + RI VRNLP+T E + + F FG++ V ++ D TK+SKG A++ +
Sbjct: 325 ADMEALSETGRIFVRNLPYTATEEEVAELFEQFGKLTAVHILVDRSTKRSKGLAYVTFVI 384
Query: 95 QDDALLALESMDHKNLDGRLIYVDIAK--PGKDR-FGGYPRTS 134
+D + A+E++D GRLI++ AK P D GG RT
Sbjct: 385 PEDGVKAMEAVDGSIFQGRLIHLLPAKRAPQLDSTMGGVGRTG 427
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
A++I+VRN+ F + +QK F+ FG++ +V+L K + +G+AF+++ ++ + A+
Sbjct: 768 ATKIVVRNVAFEATKRDIQKLFNPFGQLKQVRLPK-KFDGAHRGFAFVEFNTRRETQAAM 826
Query: 103 ESMDHKNLDGRLIYV 117
+++ +L GR I +
Sbjct: 827 DALRGTHLYGRHIII 841
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ V+N+P + L++ F+A GEV +VK+V+ S+ AF+ Y ++ A AL+
Sbjct: 1 SRLCVKNVPKHLKDDRLREHFAAMGEVTDVKIVR-TADGTSRQMAFVGYKTEAMATKALK 59
Query: 104 SMDHKNLDGRLIYVDIAK 121
D +D + V A+
Sbjct: 60 YFDKTFIDTSRVEVQYAR 77
>gi|125533975|gb|EAY80523.1| hypothetical protein OsI_35702 [Oryza sativa Indica Group]
Length = 468
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + + LP T E L++ +FGE+ EV+L+KD+ TK++KG+AF+ +T++D A
Sbjct: 104 PQGSEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKDAAQR 163
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+E + K GR + +++
Sbjct: 164 AIEELHDKEHKGRTLRCSLSQ 184
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V+NLP + +++ F GEV +V L + K + + F+ + + AL A++
Sbjct: 285 IYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHK-RDFGFVHFAERSSALKAVKGS 343
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ DG+++ V +AKP D+
Sbjct: 344 EKYEFDGQVLEVSMAKPLGDK 364
>gi|60416093|gb|AAH90711.1| Rbm19 protein, partial [Danio rerio]
Length = 802
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ +RN+P+T E L++ FS G ++EV D +TKK KG+AF+ Y ++A+ AL
Sbjct: 398 SGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSAL 457
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
+D GR+++V ++ K++ P G
Sbjct: 458 AQLDGHTFQGRVLHVMASRLKKEKADQGPDAPG 490
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK--DEITK-KSKGYAFIQYTSQDDAL 99
S + ++NL F T E TLQK FS G V + K D+ K S GY F+QY + + A
Sbjct: 701 GSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQ 760
Query: 100 LALESMDHKNLDGRLIYVDIAK 121
A+ + H +D + V I++
Sbjct: 761 KAMRQLQHCTVDEHQLEVKISE 782
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E +K F+ FG + + +K KD K + + F+ + +++DA A
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCALKFTKD---GKFRKFGFVGFKTEEDAQKA 58
Query: 102 LESMDHKNLDGRLIYVDI 119
L+ + +D + V++
Sbjct: 59 LKHFNKSFVDTSRVTVEL 76
>gi|332211654|ref|XP_003254929.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Nomascus
leucogenys]
Length = 393
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|313225077|emb|CBY20870.1| unnamed protein product [Oikopleura dioica]
gi|313245842|emb|CBY34831.1| unnamed protein product [Oikopleura dioica]
Length = 272
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
SN + R+ V N+PF E L++ F FG++ EV+++ ++ + SKG+ F+ Y +DD
Sbjct: 124 SNNTESKRLHVSNIPFRFREPDLREMFEKFGKITEVEIIFND--RGSKGFGFVSYADKDD 181
Query: 98 ALLALESMDHKNLDGRLIYVDIA 120
A A ++H +DGR+I V+ A
Sbjct: 182 ADRAKREINHTKIDGRMIEVNDA 204
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S + V NL F+ + FS FG+VA V ++KD T++S+G AF+ Y ++DA A
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAAR 116
Query: 104 SMDHKNLDGRLIYVDIA 120
SMD K L+GR + V IA
Sbjct: 117 SMDAKILNGRKLTVSIA 133
>gi|298528813|ref|ZP_07016217.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512465|gb|EFI36367.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ + V NL + T E L+ F+ FGEV+ K+++D T +S+G+ F++ + D A+E
Sbjct: 2 TNLYVGNLSWNTTETQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFVEMENGADE--AVE 59
Query: 104 SMDHKNLDGRLIYVDIAKPGKD 125
++ K+ DGR I V++AKP ++
Sbjct: 60 KLNGKDFDGRTIKVNVAKPKRE 81
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L T E +L+ F +G ++EV L+KD T KS+G+AFI + S DA A+
Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 105 MDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 69 MNGKSLDGKAIKV 81
>gi|358055061|dbj|GAA98830.1| hypothetical protein E5Q_05518 [Mixia osmundae IAM 14324]
Length = 383
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T + L+ F+ FG V + +++D TK+S+G+AF+ S D+A A++ M
Sbjct: 40 LHVSGLSNRTEDRDLEDCFAKFGRVQKSAIMRDPHTKESRGFAFVTMESADEAAAAIDGM 99
Query: 106 DHKNLDGRLIYVDIAKPGKDRF---GGYPRTSGPPKQ 139
+ L GR+I V +A+ G+ R G Y GPPK+
Sbjct: 100 NATELHGRMISVALARRGRARTPTPGAY---HGPPKR 133
>gi|303271523|ref|XP_003055123.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463097|gb|EEH60375.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 432
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 47 MVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMD 106
MV N+ + T E TL F G + + K++ D T + KG+AFI + + A+ A+++M
Sbjct: 1 MVGNMSYDTSEQTLAGAFGHLGRITDCKVITDRDTGRPKGFAFITFDDPNAAMQAVQTMS 60
Query: 107 HKNLDGRLIYVDIAK 121
+N+DGR + V++AK
Sbjct: 61 GQNVDGRSVRVEMAK 75
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 33 LRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQY 92
LR + + R+ VRNLP+ E L++ F AFG ++E+ + D TKK KG+AFI +
Sbjct: 528 LRPEDEDIGESGRLFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGFAFITF 587
Query: 93 TSQDDALLALESMDHKNLDGRLIYVDIA--KPGKD 125
+ A A +++D+ GRL++V A KPG D
Sbjct: 588 VLPEHASQAFQNLDNTIFQGRLLHVLPARHKPGTD 622
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 47/79 (59%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++++VRN+ F +Q+ FS G + V+L + + +G+AFI+++++ +A A
Sbjct: 1004 SNKLVVRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQYDGTHRGFAFIEFSTKQEARDAF 1063
Query: 103 ESMDHKNLDGRLIYVDIAK 121
++ +L GR + ++ A+
Sbjct: 1064 SALSGTHLYGRRLAMEFAE 1082
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK-----SKGYAFIQYTSQDD 97
+S + V+NL F T E L+ F G + V++ + K+ S G+ F++Y S+ D
Sbjct: 901 SSSVFVKNLHFDTDEDALRHHFEGIGPIRSVRVARKPNPKEPSRPLSMGFGFVEYKSRQD 960
Query: 98 ALLALESMDHKNL 110
A+ A++ + +L
Sbjct: 961 AVRAIKMLHGSSL 973
>gi|81673115|gb|AAI09900.1| ZCRB1 protein [Bos taurus]
Length = 139
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T++SKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 152
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + LQ+ F FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ M+ + L GR + V+ A+P + R
Sbjct: 61 INGMNGQPLGGRSVVVNEARPMEAR 85
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 23 RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK 82
RE C + L L + I V NL F E L+ F +GEV+ V ++ D T
Sbjct: 49 REASCL----VGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETG 104
Query: 83 KSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
+S+G+AF++ + A A+E+++ +DGR + V+ A+P
Sbjct: 105 RSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARP 144
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|296484918|tpg|DAA27033.1| TPA: zinc finger CCHC-type and RNA binding motif 1-like [Bos
taurus]
Length = 217
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T++SKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 54/81 (66%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V NL + T + +L+ FS FG++ + +++D T +S+G+ F+ ++S ++A A
Sbjct: 1 MSAKVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ S++ + LDGR I V++A
Sbjct: 61 ITSLNEQELDGRRIRVNLANA 81
>gi|402894334|ref|XP_003910320.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Papio
anubis]
Length = 394
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G V+E+ D +TKK KG+AF+ + + A+ A
Sbjct: 362 SGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAY 421
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 422 AEVDGQVFQGRMLHV 436
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQTA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D I V+ K
Sbjct: 59 LNHFNKSFIDTSRITVEFCK 78
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ ++NL F T E TL+ FS G V + K + S G+ F++Y + A AL
Sbjct: 692 LFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKAL 751
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ + +DG + V I++
Sbjct: 752 KQLQGHVVDGHKLEVRISE 770
>gi|170649643|gb|ACB21230.1| cold inducible RNA binding protein (predicted) [Callicebus moloch]
Length = 166
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L F T+E +L++ FS +G+++EV +VKD T+ S+G+ F + DDA A+ +
Sbjct: 7 KLFVGALSFDTNEQSLEQVFSKYGQISEVVVVKDRETQGSRGFGFATLENIDDAKDAMMA 66
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K++DGR I V A
Sbjct: 67 MNRKSVDGRQIRVGQA 82
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G V+E+ D +TKK KG+AF+ + + A+ A
Sbjct: 404 SGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAY 463
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 464 AEVDGQVFQGRMLHV 478
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 819 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAKRAF 878
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 879 NALCHSTHLYGRRLVLEWA 897
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQTA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D I V+ K
Sbjct: 59 LNHFNKSFIDTSRITVEFCK 78
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ ++NL F T E TL+ FS G V + K + S G+ F++Y + A AL
Sbjct: 719 LFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKAL 778
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ + +DG + V I++
Sbjct: 779 KQLQGHVVDGHKLEVRISE 797
>gi|410941922|ref|ZP_11373714.1| hypothetical protein LEP1GSC041_2758 [Leptospira noguchii str.
2006001870]
gi|410782916|gb|EKR71915.1| hypothetical protein LEP1GSC041_2758 [Leptospira noguchii str.
2006001870]
Length = 86
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NL + +E TL F G V VK+V D+ + KSKG+ F++ +++++A A
Sbjct: 1 MSVNIYVGNLSYDLNEGTLGDLFRVHGTVNSVKIVMDQYSGKSKGFGFVEMSNKEEADKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRF 127
++ +D KN+ R + V++AKP +RF
Sbjct: 61 IKDLDGKNVLTRNLKVNVAKPKNERF 86
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 53/80 (66%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++++I V NL + T + TL++ F +G V + +++D T +S+G+ F+ Y+S+++A A
Sbjct: 1 MSAKIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNA 60
Query: 102 LESMDHKNLDGRLIYVDIAK 121
+ ++ +LDGR I V++A
Sbjct: 61 ISGLNETSLDGRQIKVNLAN 80
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + LQ+ F FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
+ M+ + L GR + V+ A+P + R
Sbjct: 61 INGMNGQPLGGRSVVVNEARPMEAR 85
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AF+ + + A+ A
Sbjct: 396 SGRLFVRNLPYTSTEEDLEKLFSTYGPLSELHFPIDSLTKKPKGFAFVTFLFPEHAVKAY 455
Query: 103 ESMDHKNLDGRLIYV 117
++D + GR+++V
Sbjct: 456 SAVDGQVFQGRMLHV 470
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 827 SKILVRNIPFQASLREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRAF 886
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 887 NALCHSTHLYGRRLVLEWA 905
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+ +A A
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEVEAQRA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D I V+ K
Sbjct: 59 LSHFNKCFIDTARITVEFCK 78
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKD---EITKKSKGYAFIQYTSQDDALLAL 102
+ ++NL F T E TL++ FS G V + K E S G+ F++Y + A AL
Sbjct: 727 LFIKNLNFDTTEETLKEVFSKAGAVRSCSVSKKKNKEGALLSMGFGFVEYRKPEHAQKAL 786
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ +DG + + I++
Sbjct: 787 RQLQGHVVDGHKLELRISE 805
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ ++V LP T + ++ F +FGEV KL++D++T +S GY F+ Y Q+DA A+
Sbjct: 98 TNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAIN 157
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF-GGYPRTSGPPKQQPLSE 144
+++ L + I V IA+P + G SG PK S+
Sbjct: 158 ALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSD 199
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL T E+ L + F FG V VK+++D + K KG+ F+ T+ ++A+LA++S+
Sbjct: 351 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 410
Query: 106 DHKNLDGRLI 115
+ L R++
Sbjct: 411 NGYTLGNRVL 420
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS +GE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ S++ V NL ++T + L+ F +G V + +++D T +S+G+ F+ +T+ ++A A
Sbjct: 1 MGSKLYVGNLSWSTGDDGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFVTFTTAEEANAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ MD LDGR I V++A
Sbjct: 61 MGQMDQTELDGRTIRVNVANA 81
>gi|198470219|ref|XP_002133396.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
gi|198145347|gb|EDY72024.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
Length = 927
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ RI RNL +TT E +QK F +G V E+ L D++T+K KG+ + Y + AL A
Sbjct: 364 SGRIFFRNLAYTTTEEEMQKLFEQYGPVVEINLPVDKLTRKIKGFGTVTYMMPEHALKAF 423
Query: 103 ESMDHKNLDGRLIYV---------DIAKPGKDRFG 128
++D + +GRL+++ D ++ KD FG
Sbjct: 424 NALDGTDFNGRLLHLLPGKELDKNDQSQADKDDFG 458
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS--KGYAFIQYTSQDDALL 100
++I+VRN+PF + + F AFGE+ +++ K + +G+ F+ + ++ DA
Sbjct: 784 GTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFGFVDFITKADAKR 843
Query: 101 ALESMD-HKNLDGRLIYVDIA 120
A +++ +L GR + ++ A
Sbjct: 844 AFDALSASTHLYGRRLVLEWA 864
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 49/76 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ + N+ + T L++ F +GE+ ++ + +D TK+SKG+ F+++ S+ DA A++ M
Sbjct: 16 LKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEYAMDRM 75
Query: 106 DHKNLDGRLIYVDIAK 121
D + +DGR I V +A+
Sbjct: 76 DGRWVDGREIRVAMAR 91
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 50 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 109
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 110 DGAVLDGRELRVQMARYGR 128
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L + T E +++EF ++G + V+LV D+ T K +GYAFI+Y D A +
Sbjct: 143 LFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQA 202
Query: 106 DHKNLDGRLIYVDIAKP---------------GKDRFGGYP---RTSGPPKQQPLSEQDE 147
D + +DGR + VD+ + G R GG R SG +QQ SE+
Sbjct: 203 DGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRSEEPR 262
Query: 148 VADCWY 153
V + +
Sbjct: 263 VREDRH 268
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGY 130
D LDGR + V +A R GGY
Sbjct: 76 DGAVLDGRELRVQMA-----RCGGY 95
>gi|426232956|ref|XP_004010483.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ovis aries]
Length = 217
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T++SKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|70778746|ref|NP_001020489.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Bos taurus]
gi|426224667|ref|XP_004006490.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Ovis aries]
gi|426247121|ref|XP_004017335.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ovis aries]
gi|75069805|sp|Q56JZ7.1|ZCRB1_BOVIN RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|58760376|gb|AAW82098.1| MADP-1 protein-like [Bos taurus]
gi|296487721|tpg|DAA29834.1| TPA: zinc finger CCHC-type and RNA-binding motif-containing protein
1 [Bos taurus]
Length = 217
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T++SKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V +L + T + L+ FS+FGE+ + K++ D T +S+G+ F+ ++++ A+E
Sbjct: 10 RCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIEG 69
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 70 MNGKELDGRSIVVNEAQS 87
>gi|224059524|ref|XP_002299889.1| predicted protein [Populus trichocarpa]
gi|222847147|gb|EEE84694.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ V L T H L++ FS FG V+E +LV + T + KG+ F+ + S+ DA AL++
Sbjct: 8 QLFVSRLSSYTTNHELKRLFSPFGAVSEARLVVESKTLRPKGFGFVTFESEADAHKALKA 67
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ + ++GRLI+V++AK
Sbjct: 68 MNGRIVNGRLIFVEVAK 84
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T + L + F +GEV +V + +D T+++KG+AF++Y + DA A++SM
Sbjct: 14 LKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEKRDAEDAIDSM 73
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V AK G+
Sbjct: 74 DGAVLDGRELRVQTAKYGR 92
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|358055062|dbj|GAA98831.1| hypothetical protein E5Q_05519 [Mixia osmundae IAM 14324]
Length = 400
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T + L+ F+ FG V + +++D TK+S+G+AF+ S D+A A++ M
Sbjct: 57 LHVSGLSNRTEDRDLEDCFAKFGRVQKSAIMRDPHTKESRGFAFVTMESADEAAAAIDGM 116
Query: 106 DHKNLDGRLIYVDIAKPGKDRF---GGYPRTSGPPKQ 139
+ L GR+I V +A+ G+ R G Y GPPK+
Sbjct: 117 NATELHGRMISVALARRGRARTPTPGAY---HGPPKR 150
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ +RNLP+T+ E LQ+ FS FG ++E+ D +TKK KG+AF+ + + A+ A
Sbjct: 404 SGRLFIRNLPYTSTEEDLQRLFSKFGPLSELHYPIDSLTKKPKGFAFVTFIFPEHAVRAY 463
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 464 AEVDGQVFQGRMLHV 478
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF + +Q+ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 834 SKILVRNIPFQADKREIQELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 893
Query: 103 ESMDHK-NLDGRLIYVDIA 120
+++ H +L GR + ++ A
Sbjct: 894 QALCHSTHLYGRRLVLEWA 912
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F++FG + + +K KD K + + FI + S+++AL A
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFASFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEALSA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D I V+ K
Sbjct: 59 LNHFNRSFIDTSRITVEFCK 78
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F+T E TL+ FS G V + K KK+K G+ F++Y + A
Sbjct: 734 LFIKNLNFSTTEETLKGVFSKAGMVKSCSISK----KKNKAGELLSMGFGFVEYRKPEQA 789
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +D + V I++
Sbjct: 790 QKALKQLQGHVVDSHKLEVRISE 812
>gi|303248437|ref|ZP_07334696.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302490148|gb|EFL50067.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 96
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ ++ V NLPF+T+E ++ F+A+G+V V L+ D T + +G+ F++ S + A A
Sbjct: 1 MSKKLYVGNLPFSTNEDEIRNLFAAYGDVESVNLIVDRETGRLRGFGFVE-MSPEGADAA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQ 140
+E++D K GR + V+ A+ + R GGY G P++
Sbjct: 60 MEALDGKAFGGRDLRVNEAQERQPRSGGY----GAPRRN 94
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 25 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 84
Query: 106 DHKNLDGRLIYVDIAKPG 123
D + LDGR + V +A+ G
Sbjct: 85 DGRMLDGRELRVQMARYG 102
>gi|167522944|ref|XP_001745809.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775610|gb|EDQ89233.1| predicted protein [Monosiga brevicollis MX1]
Length = 1128
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R+++RNL F E L+++F+ FG++ E+K+V+DE +SKG+ F++Y + A+
Sbjct: 335 ARLILRNLAFEVDEEKLRRKFTRFGKIVEIKVVRDE-KNRSKGFGFLEYATVGTGATAIR 393
Query: 104 SMDHKNLDGRLIYVDIAKPGKD 125
M+ ++GR + VD A +D
Sbjct: 394 EMNGVEIEGRPMAVDWALSKRD 415
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ +RNL + ++ LQ FG++ LV+D T +++G F+++ ++ DA L+ M
Sbjct: 512 LFIRNLAYDMEDYQLQASLGVFGDLEYAVLVRDRETGRARGTGFVKFKNKADADSCLQRM 571
Query: 106 DHKNL-----DGRLIYVDIA 120
+ L GR I V +A
Sbjct: 572 EDTTLPPFEVSGRPISVSLA 591
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ VRNL F+ L+ FS V + +V D T +S+G+ ++++ DDA AL
Sbjct: 25 LFVRNLAFSVTSQDLEDLFSDIAPVKQCFVVNDSQTGQSRGFGYVRFALHDDAAEALNKF 84
Query: 106 DHKNLDGRLIYVDIAK 121
+ GR + +D A+
Sbjct: 85 QNSPCQGRNLKLDWAE 100
>gi|123884311|sp|Q08BH5.1|RBM46_DANRE RecName: Full=Probable RNA-binding protein 46; AltName:
Full=RNA-binding motif protein 46
gi|115528134|gb|AAI24721.1| Zgc:153695 [Danio rerio]
Length = 510
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAF--GEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ VRNL +T E TL+ EFS G V VK + D YAFI + +++DAL ALE
Sbjct: 222 LYVRNLMLSTTEETLRSEFSQLKPGSVERVKKLTD--------YAFIHFYNREDALTALE 273
Query: 104 SMDHKNLDGRLIYVDIAKP----GKDRFG 128
SM+ K +DG I V +AKP G RFG
Sbjct: 274 SMNGKVIDGSPIEVTLAKPASKDGNKRFG 302
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V +P +E L F G + E +L+ E + +++GYAF+ YT+++ A A++ +
Sbjct: 47 VFVGKIPRDMYEDELVPVFEQAGHIYEFRLMM-EFSGENRGYAFVMYTTREKAQRAIQLL 105
Query: 106 DHKNLD-GRLIYVDIA 120
D+ + G+ I V ++
Sbjct: 106 DNYEIRPGKFIGVCVS 121
>gi|332298346|ref|YP_004440268.1| RNP-1 like RNA-binding protein [Treponema brennaborense DSM 12168]
gi|332181449|gb|AEE17137.1| RNP-1 like RNA-binding protein [Treponema brennaborense DSM 12168]
Length = 117
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ +I V NL + T E TL FS +GE+ ++KD+ T++SKG+ FI+ A A
Sbjct: 1 MSKKIYVGNLNYRTTEDTLSSAFSQYGEIVSAVVIKDKFTEQSKGFGFIEMADDAAADAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGP 136
+ M+ K +DGR + V+IA+ PRTS P
Sbjct: 61 IADMNGKEVDGRRVRVNIAED-------KPRTSRP 88
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L + T + TL+ +F FG V E +VKD T +S+G+ F++Y + +A A++
Sbjct: 2 AKLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQ 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+++ DGR I VD A
Sbjct: 62 AMNNEEFDGRRIRVDKA 78
>gi|426367314|ref|XP_004050678.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Gorilla
gorilla gorilla]
Length = 392
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 40 YPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDAL 99
Y A RI V NLP+ LQ+ FS G+V + ++V D T +S+G+ F+ +++++
Sbjct: 203 YDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVN 262
Query: 100 LALESMDHKNLDGRLIYVDIAK 121
A+ ++D +NL+GR I V++A+
Sbjct: 263 DAIAALDGQNLEGRAIKVNVAE 284
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P +++ V NLP+ L F G V +++ + T +S+G+ F+ ++ ++A
Sbjct: 110 PEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKK 169
Query: 101 ALESMDHKNLDGRLIYVDIAKPGKDRFGGYPR 132
A+E + ++GRL+ V+IA P R PR
Sbjct: 170 AVEKFNRYEVNGRLLTVNIAAPRGSRPERQPR 201
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F +G+V +V + +D T++S+G+AF++Y + DA AL++M
Sbjct: 16 LKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDKRDAEDALDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGATLDGRELRVQMARYGR 94
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ + NL + E L+ EF FGE+A V++V D T +SKG+ ++++T+ +DA+ A +
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQ 145
LDGR + VD A R PR + Q +Q
Sbjct: 309 KDTELDGRKLNVDFANA---RSNAAPRDRAQSRAQNFGDQ 345
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 16 FANSLTN---RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAE 72
FAN+ +N R+ R N S P + + + N+ F+ E+ + + F+ +G +
Sbjct: 322 FANARSNAAPRDRAQSRAQNFGDQRS--PESDTLFIGNIAFSADENMISETFAEYGSILG 379
Query: 73 VKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
V+L D + + KG+ ++Q++S D+A A ES++ L GR + +D + P
Sbjct: 380 VRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTP 429
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L + T+E L+ FS G + +VK++ +T KSKGY F+++ S+D+A AL
Sbjct: 125 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 184
Query: 105 MDHKNLDGRLIYVDIAKPG 123
M + +DGR I V A G
Sbjct: 185 MGGEVIDGRNIRVHYANSG 203
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 29 RTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYA 88
R FN + S P A + + +L F+ E + + F G+V V+L D T KG+
Sbjct: 285 RVFNDKQS----PPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFG 340
Query: 89 FIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKD 125
++Q++S DDA AL++M+ + GR I VD A P +D
Sbjct: 341 YVQFSSVDDATAALKAMNGAEIAGRAIRVDFAPPKQD 377
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+ + V L + L+ EF + GEV ++V D ++KS+G+ ++++ + A+E
Sbjct: 196 TNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIE 255
Query: 104 SMDHKNLDGRLIYVDIA 120
D +DGR I V+ A
Sbjct: 256 K-DGSEIDGRAIRVNYA 271
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L T + L + F+ FG++ E K++ D + +SKG+ F+ Y S ++A A +
Sbjct: 32 KLFISGLSRQTTDRKLNEAFAPFGQLIEAKVITDRASGRSKGFGFVSYASIEEAEKAGKG 91
Query: 105 MDHKNLDGRLIYVDIAKPGKDR 126
M+ K LDG +I+VD AKP + R
Sbjct: 92 MNAKFLDGWVIFVDPAKPREPR 113
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FSA+G ++E+ D +TKK KG+AF+ + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSAYGPLSELHYPIDTLTKKPKGFAFVTFLFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 AEVDGQVFQGRMLHV 475
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T + +G+ F+ + ++ DA A
Sbjct: 833 SKILVRNIPFQADLREIRELFSTFGELKTVRLPKKMAGTGRHRGFGFVDFFTKQDAKRAF 892
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 893 NALCHSTHLYGRRLVLEWA 911
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD +K + FI + S+ +A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGQFRK---FGFIGFKSEAEAQRA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDRFGGYPRTSGPPKQQPLSEQD 146
L +D + V+ K P K R + + + P Q S QD
Sbjct: 59 LSHFHKSFIDTARVTVEFCKSFGDPTKPR--AWSKHAQKPTQTKKSSQD 105
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ ++NL F T E TL+K FS G + + K + S G+ F++Y + A AL
Sbjct: 733 LFIKNLNFDTTEETLKKVFSKAGALRSCSISKKKSKAGALLSMGFGFVEYKKPEHAQKAL 792
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ +DG + V I++
Sbjct: 793 RQLQGHVVDGHKVEVRISE 811
>gi|406883357|gb|EKD30966.1| hypothetical protein ACD_77C00438G0003 [uncultured bacterium]
Length = 117
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 51/80 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL + + L++ F+ +GE++ K++ D T KS+G+ F++ ++ +A A+E +
Sbjct: 3 IFISNLSWAVRDADLRELFAEYGEISSAKVITDRETGKSRGFGFVEMPTEAEAKKAIEEL 62
Query: 106 DHKNLDGRLIYVDIAKPGKD 125
D DG++I V++AKP +D
Sbjct: 63 DQAEYDGKVISVNVAKPRED 82
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
NR +P NL +S ++ V +L F E +++ F FGE+ V L +D +T
Sbjct: 375 NRLHPGDGNLNLPPGVSASHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMT 434
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVD 118
+SKGYAF+QY +DA +ALE M+ L GR + V+
Sbjct: 435 GRSKGYAFVQYKRSEDARMALEQMEGFELAGRTLRVN 471
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L T E L++ FS +G +AEV L+KD T KS+G+AF+ + S DA A
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K+LDG+ I V+ A
Sbjct: 69 MNGKSLDGKNIKVEQA 84
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA AL++M
Sbjct: 16 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 76 DGRMLDGRELRVQMARYGR 94
>gi|355566744|gb|EHH23123.1| Testis-specific heterogeneous nuclear ribonucleoprotein G-T [Macaca
mulatta]
Length = 280
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|195175692|ref|XP_002028560.1| GL16640 [Drosophila persimilis]
gi|194104901|gb|EDW26944.1| GL16640 [Drosophila persimilis]
Length = 928
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ RI RNL +TT E +QK F +G V EV L D++T+K KG+ + Y + AL A
Sbjct: 364 SGRIFFRNLAYTTTEEEMQKLFEQYGPVVEVNLPVDKLTRKIKGFGTVTYMMPEHALKAF 423
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
++D + +GRL+++ PGK+
Sbjct: 424 NALDGTDFNGRLLHL---LPGKE 443
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS--KGYAFIQYTSQDDALL 100
++I+VRN+PF + + F AFGE+ +++ K + +G+ F+ + ++ DA
Sbjct: 785 GTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFGFVDFITKADAKR 844
Query: 101 ALESMD-HKNLDGRLIYVDIA 120
A +++ +L GR + ++ A
Sbjct: 845 AFDALSASTHLYGRRLVLEWA 865
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G V+E+ D +TKK KG+AF+ + + A+ A
Sbjct: 362 SGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAY 421
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 422 AEVDGQVFQGRMLHV 436
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 792 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAKRAF 851
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 852 NALCHSTHLYGRRLVLEWA 870
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQTA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D I V+ K
Sbjct: 59 LNHFNKSFIDTSRITVEFCK 78
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ ++NL F T E TL+ FS G V + K + S G+ F++Y + A AL
Sbjct: 692 LFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKAL 751
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ + +DG + V I++
Sbjct: 752 KQLQGHVVDGHKLEVRISE 770
>gi|410465997|ref|ZP_11319150.1| RRM domain-containing RNA-binding protein [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409980981|gb|EKO37622.1| RRM domain-containing RNA-binding protein [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 97
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ ++ V NLPF+T+E ++ F+A+G+V VKL+ D T + +G+ F++ D A A
Sbjct: 1 MSKKLYVGNLPFSTNEDEIRDLFAAYGDVTSVKLIVDRETGRLRGFGFVE-MGDDGADAA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGY 130
++ ++ K+ GR + V+ A+ + R GGY
Sbjct: 60 MQGLNGKDFGGRDLRVNEAEERQPRAGGY 88
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ V L + T TL+ +FS FGEV + ++ D T +S+G+ F+ ++SQ++A A+E
Sbjct: 2 SKLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIE 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ + +GR I V A
Sbjct: 62 AMNEQEFEGRQIRVSEA 78
>gi|395743087|ref|XP_003780683.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked-like-2 [Pongo abelii]
Length = 392
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGHIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +L+ FS +GE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ S++ V+ L F+T E L K FS +G V + ++ ++ +SKG+ ++ + +++A A
Sbjct: 31 MTSKVFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGYVIFAKEEEACKA 90
Query: 102 LESMDHKNLDGRLIYVDIAKPGK 124
M+ K L GR+IYVD+ P K
Sbjct: 91 QIDMNGKILHGRVIYVDVQLPNK 113
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA ALE+M
Sbjct: 25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 84
Query: 106 DHKNLDGRLIYVDIAKPG 123
D + LDGR + V +A+ G
Sbjct: 85 DGRMLDGRELRVQMARYG 102
>gi|326427500|gb|EGD73070.1| hypothetical protein PTSG_12213 [Salpingoeca sp. ATCC 50818]
Length = 1010
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+R++VRNL F+T E LQ+ FS FG++AE K+VKD+ +SKG+ F+ ++ A++
Sbjct: 345 ARLIVRNLDFSTTEDDLQRIFSRFGKLAETKIVKDD-KGRSKGFGFVMLSNPLVVKKAVK 403
Query: 104 SMDHKNLDGRLIYVDIA 120
++ + L+GR I VD A
Sbjct: 404 QVNGRTLNGRAIAVDFA 420
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ VR++ + L++ S FG V LVKD+ T +G AF++++S+++A LE+
Sbjct: 593 VFVRDMSLDSTHDDLKELMSQFGTVKYALLVKDKQTDLPRGTAFVRFSSKEEADACLEAA 652
Query: 106 DHKN----LDGRLIYVDIAKPGKD 125
+ + LD R + V A P +D
Sbjct: 653 SNPDAPLMLDTRQLAVSRALPKRD 676
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 26 PCFRTFNLRA-----SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI 80
P R LRA S ++ +A+ + VRNL F+ L+ FS G V + +VK
Sbjct: 2 PSRRQRKLRAAEGTRSGTDMSVAT-LFVRNLAFSVTAEDLENVFSDIGPVRQCFIVKTP- 59
Query: 81 TKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGP-PKQ 139
S+G+ ++ + ++DA+ A + +D L GR + V A+ R G GP P
Sbjct: 60 QGGSRGFGYVLFGMREDAMEAQKQLDGHKLHGRPMSVQFAR----RKGA----QGPAPAP 111
Query: 140 QPLSEQD 146
+P EQ+
Sbjct: 112 RPKQEQE 118
>gi|351712532|gb|EHB15451.1| Putative RNA-binding protein 3 [Heterocephalus glaber]
Length = 157
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ V L F T+E L+ FS+FG ++EV +VKD +T++ G+ F T+ + A A+
Sbjct: 6 GKLFVGRLNFNTNEQALEDHFSSFGAISEVVVVKDRVTQQLWGFGFNTSTNPEQASDAMR 65
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ ++LDGR I VD A
Sbjct: 66 AMNGESLDGRQIRVDHA 82
>gi|148906727|gb|ABR16511.1| unknown [Picea sitchensis]
Length = 635
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%)
Query: 53 FTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDG 112
F T E L+K+FS FG V +V++V+D++T S+G+ F+ +DA A+ ++D +G
Sbjct: 563 FVTTERDLEKKFSRFGRVNDVRIVRDKLTGDSRGFGFLSLERDEDADAAIRALDQTQWNG 622
Query: 113 RLIYVDIAK 121
R++ V+ +K
Sbjct: 623 RIVLVEKSK 631
>gi|357635300|ref|ZP_09133178.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|357583854|gb|EHJ49187.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
Length = 92
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NLPF T E +++ F+ +GEV VKL+ D T K +G+ F++ A A
Sbjct: 1 MSKNIYVGNLPFRTTEDSVRDLFARYGEVQSVKLISDRETGKPRGFGFVEMDDDAAADEA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQ 140
++S+D + +GR + V+ AK PR + PP++Q
Sbjct: 61 IKSLDGADFEGRNLKVNEAK---------PREARPPRRQ 90
>gi|398338058|ref|ZP_10522763.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 86
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NL + +E TL F G V VK++ D+ + KSKG+ F++ ++D+A A
Sbjct: 1 MSVNIYVGNLSYDLNEGTLGDLFRVHGTVNSVKIITDQYSGKSKGFGFVEMPNKDEADKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRF 127
++ +D KN+ R + V++AKP +RF
Sbjct: 61 IKDLDGKNVLTRNLKVNVAKPKGERF 86
>gi|241952837|ref|XP_002419140.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
gi|223642480|emb|CAX42729.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
Length = 846
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ +RN+ + E +K FS +G + EV + D T KSKG+ ++Q++ +DDA A S
Sbjct: 312 RLFIRNISYEASEEDFRKLFSQYGALEEVHIAIDTRTGKSKGFLYVQFSKKDDATRAYRS 371
Query: 105 MDHKNLDGRLIYVDIAKPGKD-RFGGYPRTSGP-PKQQPLSEQDEVADCWY 153
+D + GRL+++ A KD R + + P KQ+ L ++ + A +
Sbjct: 372 LDKQIFQGRLLHILPADQKKDHRLDEFDLKNLPLKKQRELKKKSQAAKSQF 422
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR++V+ LP E L++ FS G+V +VKL+K +S+ +AFI Y S D A A++
Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKR-NGESRKFAFIGYKSADAAERAVK 60
Query: 104 SMDHKNLDGRLIYVDIAKPGKD 125
+ +D I V+ AK D
Sbjct: 61 YFNKSFIDTARIDVEFAKTFSD 82
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 49 RNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHK 108
+NLPF L + F AFG++ V++ K + + ++G+AF+++ +A A+ ++
Sbjct: 723 KNLPFEATRKDLLELFGAFGQLKSVRVPK-KFDQSARGFAFVEFNLMKEAETAMNQLEGV 781
Query: 109 NLDGRLIYVDIAK 121
+L GR + + A+
Sbjct: 782 HLLGRRLVMQYAE 794
>gi|24216457|ref|NP_713938.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45656373|ref|YP_000459.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|386075447|ref|YP_005989767.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|417762400|ref|ZP_12410391.1| hypothetical protein LEP1GSC027_2973 [Leptospira interrogans str.
2002000624]
gi|417768164|ref|ZP_12416098.1| hypothetical protein LEP1GSC007_4445 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417770031|ref|ZP_12417943.1| hypothetical protein LEP1GSC014_0844 [Leptospira interrogans
serovar Pomona str. Pomona]
gi|417773456|ref|ZP_12421335.1| hypothetical protein LEP1GSC025_0942 [Leptospira interrogans str.
2002000621]
gi|417784087|ref|ZP_12431798.1| hypothetical protein LEP1GSC077_2748 [Leptospira interrogans str.
C10069]
gi|418669622|ref|ZP_13231001.1| hypothetical protein LEP1GSC019_1988 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418673048|ref|ZP_13234376.1| hypothetical protein LEP1GSC026_4363 [Leptospira interrogans str.
2002000623]
gi|418681348|ref|ZP_13242579.1| hypothetical protein LEP1GSC045_2259 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418688776|ref|ZP_13249915.1| hypothetical protein LEP1GSC080_3683 [Leptospira interrogans str.
FPW2026]
gi|418699479|ref|ZP_13260438.1| hypothetical protein LEP1GSC087_4123 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418705840|ref|ZP_13266696.1| hypothetical protein LEP1GSC096_1136 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418707806|ref|ZP_13268622.1| hypothetical protein LEP1GSC097_4629 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418712506|ref|ZP_13273245.1| hypothetical protein LEP1GSC099_3865 [Leptospira interrogans str.
UI 08452]
gi|418725826|ref|ZP_13284441.1| hypothetical protein LEP1GSC104_3981 [Leptospira interrogans str.
UI 12621]
gi|418729643|ref|ZP_13288190.1| hypothetical protein LEP1GSC105_2490 [Leptospira interrogans str.
UI 12758]
gi|421084407|ref|ZP_15545267.1| hypothetical protein LEP1GSC173_4310 [Leptospira santarosai str.
HAI1594]
gi|421104458|ref|ZP_15565053.1| hypothetical protein LEP1GSC117_1433 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421117726|ref|ZP_15578083.1| hypothetical protein LEP1GSC069_3724 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421123613|ref|ZP_15583889.1| hypothetical protein LEP1GSC057_0578 [Leptospira interrogans str.
Brem 329]
gi|421124874|ref|ZP_15585131.1| hypothetical protein LEP1GSC020_2921 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421135877|ref|ZP_15595996.1| hypothetical protein LEP1GSC009_3390 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|24197759|gb|AAN50956.1|AE011532_4 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45599607|gb|AAS69096.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|353459239|gb|AER03784.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400326917|gb|EJO79175.1| hypothetical protein LEP1GSC045_2259 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400349275|gb|EJP01573.1| hypothetical protein LEP1GSC007_4445 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400362017|gb|EJP17966.1| hypothetical protein LEP1GSC080_3683 [Leptospira interrogans str.
FPW2026]
gi|409941846|gb|EKN87472.1| hypothetical protein LEP1GSC027_2973 [Leptospira interrogans str.
2002000624]
gi|409947987|gb|EKN97979.1| hypothetical protein LEP1GSC014_0844 [Leptospira interrogans
serovar Pomona str. Pomona]
gi|409952711|gb|EKO07219.1| hypothetical protein LEP1GSC077_2748 [Leptospira interrogans str.
C10069]
gi|409960915|gb|EKO24665.1| hypothetical protein LEP1GSC104_3981 [Leptospira interrogans str.
UI 12621]
gi|410010698|gb|EKO68832.1| hypothetical protein LEP1GSC069_3724 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410019971|gb|EKO86777.1| hypothetical protein LEP1GSC009_3390 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410343281|gb|EKO94532.1| hypothetical protein LEP1GSC057_0578 [Leptospira interrogans str.
Brem 329]
gi|410365910|gb|EKP21303.1| hypothetical protein LEP1GSC117_1433 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432979|gb|EKP77330.1| hypothetical protein LEP1GSC173_4310 [Leptospira santarosai str.
HAI1594]
gi|410438005|gb|EKP87104.1| hypothetical protein LEP1GSC020_2921 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410576765|gb|EKQ39768.1| hypothetical protein LEP1GSC025_0942 [Leptospira interrogans str.
2002000621]
gi|410579949|gb|EKQ47782.1| hypothetical protein LEP1GSC026_4363 [Leptospira interrogans str.
2002000623]
gi|410754553|gb|EKR16203.1| hypothetical protein LEP1GSC019_1988 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761485|gb|EKR27664.1| hypothetical protein LEP1GSC087_4123 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410764559|gb|EKR35270.1| hypothetical protein LEP1GSC096_1136 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410771848|gb|EKR47046.1| hypothetical protein LEP1GSC097_4629 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410775821|gb|EKR55812.1| hypothetical protein LEP1GSC105_2490 [Leptospira interrogans str.
UI 12758]
gi|410790983|gb|EKR84665.1| hypothetical protein LEP1GSC099_3865 [Leptospira interrogans str.
UI 08452]
gi|455669275|gb|EMF34422.1| hypothetical protein LEP1GSC201_4092 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455788365|gb|EMF40352.1| hypothetical protein LEP1GSC067_2699 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456823347|gb|EMF71817.1| hypothetical protein LEP1GSC148_3574 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456969675|gb|EMG10620.1| hypothetical protein LEP1GSC151_4904 [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
gi|456988316|gb|EMG23415.1| hypothetical protein LEP1GSC150_4425 [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 86
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NL + +E TL F A G V VK++ D+ + KSKG+ F++ ++++A A
Sbjct: 1 MSVNIYVGNLSYDLNEGTLGDLFRAHGTVNSVKIIMDQYSGKSKGFGFVEMPNKEEADKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRF 127
++ +D KN+ R + V++AKP +RF
Sbjct: 61 IKDLDGKNVLTRNLKVNVAKPKNERF 86
>gi|410964145|ref|XP_003988616.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Felis catus]
Length = 217
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K + GR+I IA
Sbjct: 67 CTRAINNKQVFGRVIKASIA 86
>gi|350534520|ref|NP_001233578.1| RNA-binding motif protein, X-linked-like-2 [Pan troglodytes]
gi|343958222|dbj|BAK62966.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
gi|343961837|dbj|BAK62506.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
Length = 392
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D +K+S+G+AF+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGALLDGRELRVQMARYGR 94
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
R ++ + R V L + T H+L FS +GEV E K++ D T++S+G+ F+ ++
Sbjct: 7 REEMAASDVEYRCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFS 66
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAKP 122
A+E M+ K LDGR I V+ A+
Sbjct: 67 XXXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T L+K FS +GE+ E K++ D T +S+G+ F+ + S+ A+E
Sbjct: 9 RCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRSITVNEAQS 86
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + L+++F FG+V E +VKD T +S+G+ F++Y +A A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+++ DGR I VD A
Sbjct: 62 AMNNEEFDGRRIRVDKA 78
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AF+ + + A+ A
Sbjct: 375 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMMPEHAVKAY 434
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 435 AGVDGQVFQGRMLHV 449
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 806 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 865
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 866 NALCHSTHLYGRRLVLEWA 884
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F AFG + + +K KD K + + FI + S+D+A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFEAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEDEARTA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L + +D + V+ K
Sbjct: 59 LNHFNKSFIDTSRVAVEFCK 78
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F+T E TL++ FS G V + + KKSK G+ F++Y + A
Sbjct: 706 VFIKNLNFSTTEETLKEVFSKVGMVKSCSISR----KKSKTGELLSMGFGFVEYRKPEQA 761
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 762 DRALKQLQGHVVDGHKLEVRISE 784
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L + T+E L+ FS G + +VK++ +T KSKGY F+++ S+D+A AL
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 105 MDHKNLDGRLIYVDIAKPG 123
M + +DGR I V A G
Sbjct: 98 MGGEVIDGRNIRVHYANSG 116
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + L+++F FG+V E +VKD T +S+G+ F++Y +A A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+++ DGR I VD A
Sbjct: 62 AMNNEEFDGRRIRVDKA 78
>gi|153252068|ref|NP_055284.3| RNA-binding motif protein, X-linked-like-2 [Homo sapiens]
gi|229462965|sp|O75526.3|HNRGT_HUMAN RecName: Full=RNA-binding motif protein, X-linked-like-2; AltName:
Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
Length = 392
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T++ LQ+ FS FG+V + K++ D + +S+G+ F+ + + A+E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFGGY 130
M+ K LDGR+I V+ A+ GG+
Sbjct: 67 MNGKELDGRVITVNEAQSRGSGGGGW 92
>gi|8576316|gb|AAC24858.2| testes specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
gi|119589071|gb|EAW68665.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 392
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|121583453|ref|YP_973884.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120596707|gb|ABM40142.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 150
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+T + LQ+ F FG V K++ + T +SKG+ F++ + A A
Sbjct: 1 MGNKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMANDAQAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRT 133
+ M+ + L GR I V+ A+P + R PRT
Sbjct: 61 INGMNGQPLGGRSITVNEARPMEAR---PPRT 89
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L T E L++ FS +G +AEV L+KD T KS+G+AF+ + S DA A
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K+LDG+ I V+ A
Sbjct: 69 MNGKSLDGKNIKVEQA 84
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL +T E+ L+ FS +GEVA ++ D+ + KS+G+ F+ ++ DA A+E++
Sbjct: 3 IYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEAL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ LDGR + V+ A+P
Sbjct: 63 NGSQLDGRSLKVNEARP 79
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 51/77 (66%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T +++L++ F FG V + +VKD T +S+G+ F+++++ ++A A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMN 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+++ DGR I VD A
Sbjct: 62 AMNNQEFDGRQIRVDKA 78
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L + + L+KEF FGEV +++ + T++SKG+ ++ + S +DA A+E+M
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+DGR I VD + P +R
Sbjct: 463 AGTEIDGRTINVDFSAPKPER 483
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE-- 103
+ + NLPF+ + ++ + FS +G++ V+L D T++ KG+ ++++ +Q+ A A+
Sbjct: 503 LFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAVNVG 562
Query: 104 SMDHKNLDGRLIYVDIAKP 122
D +D R +D ++P
Sbjct: 563 RGDGIYIDQRQARLDYSQP 581
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNL + L+ EFS+FG + ++ + D+ T SKG+A++QYT D A AL
Sbjct: 307 RLFVRNLSYDVSYEDLEAEFSSFGNLEQIHIPLDKTTGSSKGFAYVQYTDPDSAEKALVD 366
Query: 105 MDHKNLDGRLIYV 117
D + GRLI++
Sbjct: 367 RDGRTFQGRLIHI 379
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
++++NLPF + ++ F +G++ V++ K ++ + ++G+AF +T+ +A A++++
Sbjct: 704 VIIKNLPFEATKKDVRALFGEYGQLRSVRVPK-KMDRGARGFAFADFTTVKEAQSAMDAL 762
Query: 106 DHKNLDGRLIYVDIAK 121
+L GR + +D A+
Sbjct: 763 KDTHLLGRRLVLDFAE 778
>gi|297833586|ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
gi|297330515|gb|EFH60934.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L + E +L+ FS+FGEVAEV++ D+ + +S+G+ F+ + + DAL A ++
Sbjct: 41 KLFIGGLSCSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 100
Query: 105 MDHKNLDGRLIYVDIA 120
MD K L GR + + A
Sbjct: 101 MDGKGLLGRPLRISFA 116
>gi|317154980|ref|YP_004123028.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316945231|gb|ADU64282.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 91
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V N+PF+ E+ ++ F +G+VA VKLV+D T + +G+ F++ AL A+E++
Sbjct: 4 IYVGNIPFSVSENDIRGLFGEYGDVASVKLVEDRETGRFRGFGFVEMDDA-GALEAIEAL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
D K++ GR + V+ A+P
Sbjct: 63 DGKDMGGRTLKVNEARP 79
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ +RN+P+T E L++ FS G ++EV D +TKK KG+AF+ Y ++A+ AL
Sbjct: 397 SGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSAL 456
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
+D GR+++V ++ K++ P G
Sbjct: 457 AQLDGHTFQGRVLHVMASRLKKEKADQGPDAPG 489
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S+I+VRN+PF L++ F FGE+ V+L K I +G+ FI + ++ DA A
Sbjct: 804 SKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFS 863
Query: 104 SMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 864 ALCHSTHLYGRRLVLEWA 881
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK--DEITK-KSKGYAFIQYTSQDDAL 99
S + ++NL F T E TLQK FS G V + K D+ K S GY F+QY + + A
Sbjct: 700 GSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQ 759
Query: 100 LALESMDHKNLDGRLIYVDIAK 121
A+ + H +D + V I++
Sbjct: 760 KAMRQLQHCTVDEHQLEVKISE 781
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E +K F+ FG + + +K KD K + + F+ + +++DA A
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCALKFTKD---GKFRKFGFVGFKTEEDAQKA 58
Query: 102 LESMDHKNLDGRLIYV----DIAKPGKDR 126
L+ + +D + V D P K R
Sbjct: 59 LKHFNKSFVDTSRVTVELCTDFGDPNKAR 87
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G+AF+++ + DA A+++M
Sbjct: 4 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 63
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 64 DGAVLDGRELRVQMARYGR 82
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 22 NRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEIT 81
NR +P NL +S ++ V +L F E +++ F FGE+ V L +D +T
Sbjct: 351 NRLHPGDGNLNLPPGVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMT 410
Query: 82 KKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVD 118
+SKGYAF+QY +DA +ALE M+ L GR + V+
Sbjct: 411 GRSKGYAFVQYKRAEDARMALEQMEGFELAGRTLRVN 447
>gi|291391560|ref|XP_002712211.1| PREDICTED: zinc finger CCHC-type and RNA binding motif 1-like
[Oryctolagus cuniculus]
Length = 217
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V +KD+ T+KSKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTTMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|158257974|dbj|BAF84960.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ EF +G + EV L+KD T KS+G+AF+ + S DA A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 37 LSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQD 96
+++ + R V L + T L++ FS FGE+ E K++ D T +S+G+ F+ ++++
Sbjct: 1 MASAEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEK 60
Query: 97 DALLALESMDHKNLDGRLIYVDIAK 121
A+E M+ +NLDGR I V+ A+
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L T E L++ FS +G +AEV L+KD T KS+G+AF+ + S DA A
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K+LDG+ I V+ A
Sbjct: 69 MNGKSLDGKNIKVEQA 84
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA AL++M
Sbjct: 17 LKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAEDALDAM 76
Query: 106 DHKNLDGRLIYVDIAKPGK----DRFGGYPRTSG 135
D + LDGR + V +A+ G+ R GG R +G
Sbjct: 77 DGRMLDGRELRVQMARYGRPTSPQRRGGGNRHNG 110
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G++F+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|121583148|ref|YP_973589.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120596410|gb|ABM39847.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 148
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP+T + LQ+ F FG V K++ + T +SKG+ F++ + A A
Sbjct: 1 MGNKLYVGNLPYTVRDEDLQQSFGQFGTVTSAKVMMERDTGRSKGFGFVEMANDAQAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGYPRT 133
+ M+ + L GR I V+ A+P + R PRT
Sbjct: 61 INGMNGQPLGGRSITVNEARPMEAR---PPRT 89
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ S+I V+ L F+T E L + FS +G+V + +V + +SKG+ ++ + ++DA A
Sbjct: 67 MTSKIFVKGLAFSTTEDKLAEAFSQYGKVLKADIVLNRAKTRSKGFGYVTFAKEEDAQKA 126
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
M+ K L GR++YVD+ P K +
Sbjct: 127 QIGMNRKILHGRVLYVDMEPPDKHK 151
>gi|392375173|ref|YP_003207006.1| RNP-1 like RNA-binding protein [Candidatus Methylomirabilis
oxyfera]
gi|258592866|emb|CBE69175.1| RNP-1 like RNA-binding protein (modular protein) [Candidatus
Methylomirabilis oxyfera]
Length = 140
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGE-VAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
+ +R+ V NLPF T E L+ F G VA+VK++ D T +++G+AF++ +Q DA
Sbjct: 29 MGTRVYVGNLPFDTDEAALRTLFEEGGRRVADVKIITDRDTGRARGFAFVEMENQSDAQA 88
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+++++ + + GR + V+ AK
Sbjct: 89 AIQALNGRQVGGRALTVNEAK 109
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ ++ L++ F FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ M+ + L GR I V+ A+P
Sbjct: 61 INGMNGQALGGRSIVVNEARP 81
>gi|406994267|gb|EKE13283.1| hypothetical protein ACD_13C00045G0007 [uncultured bacterium]
Length = 134
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ R+ V LPF+T + L+ FS G V ++ D++T +SKG+ F++ + ++A A
Sbjct: 1 MNKRLFVAGLPFSTTQDELKTLFSESGTVVSATVIMDKMTGQSKGFGFVEMETTEEAAKA 60
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR-----FGGYPRTSGPPKQQ 140
+ S++ GR + V AKP ++R FGG R+ G P+ Q
Sbjct: 61 ISSLNETEFGGRTLIVAEAKPMEERRDRADFGG--RSYGGPRGQ 102
>gi|375146472|ref|YP_005008913.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361060518|gb|AEV99509.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 95
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL F H+ L+ F+ +GEV K++ D T +S+G+ F++ T + + A+ +
Sbjct: 3 IYVSNLSFDVHDEDLKDFFAPYGEVTSAKVITDRETGRSRGFGFVEMTDEAASKKAIAEL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
D ++ R I V +AKP +DR
Sbjct: 63 DGSTVENRTISVSVAKPKEDR 83
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T + TL++ FS +G + E +VKD T +S+G+ F+++ S +A A+
Sbjct: 2 SKLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMN 61
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRF 127
+M+++ DGR+I VD A + R
Sbjct: 62 AMNNQEFDGRVIRVDKASESRPRM 85
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS +GE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|392397594|ref|YP_006434195.1| RRM domain-containing RNA-binding protein [Flexibacter litoralis
DSM 6794]
gi|390528672|gb|AFM04402.1| RRM domain-containing RNA-binding protein [Flexibacter litoralis
DSM 6794]
Length = 97
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NLP++ E L+ FS G V K++ D T++S+G+ F++ S++D A+E +
Sbjct: 3 LYVSNLPYSISEEELEAVFSELGVVTSTKIITDRETRRSRGFGFVEMESEEDGEAAIEEL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ L GR I V A P +DR
Sbjct: 63 NGVELKGREIQVKKAIPREDR 83
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 29 RTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYA 88
R +R ++N+ + + V+N+ E L++ FS FG ++ + L KDE + KS+G+
Sbjct: 216 RQSKMRELIANF---TNVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDE-SGKSRGFG 271
Query: 89 FIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGKDRF 127
F+ + +DA+ A+E +++K++DG+ +YV A+ +R
Sbjct: 272 FVNFEKHEDAVKAVEELNNKDIDGQKLYVGRAQKKSERM 310
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ I ++NL TL FSAFG++ K+ DE SKG+ F+ Y + A A+
Sbjct: 134 SGNIFIKNLHPAIDNKTLHDTFSAFGKILSCKIATDE-NGNSKGFGFVHYEESESAKAAI 192
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDR 126
E+++ L+ +YV KDR
Sbjct: 193 ENVNGMLLNDHEVYVGPHLAKKDR 216
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V+NL + + L++EF +G + K++ D+ KSKG+ F+ Y+S ++A A+ M
Sbjct: 333 LFVKNLDDSIDDAKLEEEFKPYGTITSAKVMLDD-AGKSKGFGFVCYSSPEEATKAITEM 391
Query: 106 DHKNLDGRLIYVDIAK 121
+ + G+ +YV +A+
Sbjct: 392 HQRMVAGKPLYVALAQ 407
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
S N + + V L + E L + FS G+V+ +++ +D ++K+S GYA++ + S
Sbjct: 39 STQNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSH 98
Query: 96 DDALLALESMDHKNLDGR 113
D ALE +++ + G+
Sbjct: 99 ADGEKALEELNYTPIKGK 116
>gi|194211851|ref|XP_001914735.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Equus caballus]
Length = 217
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T++SKG AFI + +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA AL++M
Sbjct: 16 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 76 DGRMLDGRELRVQMARYGR 94
>gi|452983642|gb|EME83400.1| hypothetical protein MYCFIDRAFT_164576, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 833
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP+ L+ EF FG + EV + D+ + +KG+A+IQY+ D A AL
Sbjct: 313 RLFVRNLPYDVQRDDLEAEFEPFGNLEEVHIPLDKKSGSAKGFAYIQYSDPDSAERALVD 372
Query: 105 MDHKNLDGRLIYVDIAKPGKD-RFGGYPRTSGP-PKQQPLSEQDEVADCWY 153
D + GRLI++ A K+ + + + P KQQ + + E A+ +
Sbjct: 373 RDGQTFQGRLIHIIPAFAKKESKLDDFELSKLPLKKQQQIKRKREAANTMF 423
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++++++NLPF + ++ A+G++ V++ K ++ + ++G+ F ++T+ +A A+E
Sbjct: 712 TKLVIKNLPFEASKKDVRALLGAYGQLRSVRVPK-KMDRAARGFGFAEFTTIKEAQSAME 770
Query: 104 SMDHKNLDGRLIYVD 118
++ +L GR + +D
Sbjct: 771 ALRDTHLLGRRLVID 785
>gi|317484641|ref|ZP_07943544.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|345888525|ref|ZP_08839605.1| hypothetical protein HMPREF0178_02379 [Bilophila sp. 4_1_30]
gi|316924115|gb|EFV45298.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|345040599|gb|EGW44839.1| hypothetical protein HMPREF0178_02379 [Bilophila sp. 4_1_30]
Length = 88
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A I V NLP++ E +Q F+ +G V VKLV D T +++G+ F++ + A A
Sbjct: 1 MAKSIYVGNLPWSATEEQVQSLFADYGPVVSVKLVSDRETGRARGFGFVE-MEEPGASAA 59
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+E++D+ N GR + V+ AKP
Sbjct: 60 IEALDNANFGGRTLRVNEAKP 80
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ ++ L++ F FG V K++ + T +SKG+ F++ S +A A
Sbjct: 1 MGNKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ M+ + L GR I V+ A+P
Sbjct: 61 INGMNGQALGGRSIVVNEARP 81
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L + T+E L+ FS G + +VK++ +T KSKGY F+++ S+D+A AL
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 105 MDHKNLDGRLIYVDIAKPG 123
M + +DGR I V A G
Sbjct: 98 MGGEVIDGRNIRVHYANSG 116
>gi|405118918|gb|AFR93691.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 752
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ VRNL F T+ +L FS +G + E L + T + G AF+Q+ + +DAL A
Sbjct: 204 SRLFVRNLAFITNSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNPEDALAAYR 263
Query: 104 SMDHKNLDGRLIYV--DIAKPGKDRFGGYPRTSGPPKQQPLSEQDE 147
++D GRL++V AKPG++ G SG + L ++DE
Sbjct: 264 ALDKTTFQGRLLHVLPGRAKPGQE---GAVAGSGVVDGKVLGKRDE 306
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-----TKKSKGYAFIQYTSQDD 97
+++++V+NLPF + +++ FSA+G++ ++L + + + ++G+AF+++T+ +
Sbjct: 622 STKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTE 681
Query: 98 ALLALESMDHKNLDGRLIYVDIAKPGKD 125
A A+E++ H +L GR + + A G++
Sbjct: 682 AARAMEALKHTHLLGRHLVLQWANEGEE 709
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G++F+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|189347593|ref|YP_001944122.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
gi|189341740|gb|ACD91143.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
Length = 90
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL + E L++ F FGEV+ ++ D+ T +SKG+ F++ + +A A+ S+
Sbjct: 3 IYIGNLDYNVTESDLRETFGEFGEVSNASVITDKFTGRSKGFGFVEMPNNAEASEAISSL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPR 132
+ +L+GR I V+ AKP + R PR
Sbjct: 63 NDSDLNGRTIKVNEAKPREQRPISRPR 89
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V L + T ++ L+ +F FG V E +VKD T +S+G+ F++Y + DA A+
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIA 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+MD + DGR + VD A
Sbjct: 62 NMDGQEFDGRRVRVDKA 78
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSSEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 SEVDGQVFQGRMLHV 475
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 59 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 103
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGALLSMGFGFVEYRKPEQA 787
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 788 QKALKQLQGHVVDGHKLEVRISE 810
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V L T L++EF+ FGEV ++V D ++ SKG+ F++Y + ++A +
Sbjct: 43 STNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKGI 102
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQP 141
+ MD K LDG +I+ + AK +S P QQP
Sbjct: 103 QGMDGKFLDGWVIFAEYAK-----------SSPAPGQQP 130
>gi|225461628|ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein VITISV_017556 [Vitis vinifera]
Length = 449
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ +R L + T L++ FSA+GE+ E ++ D++T KSKGY F+ + D ALLAL+
Sbjct: 72 KLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHVDGALLALKE 131
Query: 105 MDHKNLDGRLIYVDIAKPG 123
K +DGR+ +A G
Sbjct: 132 -PSKKIDGRMTVTQLAASG 149
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V N+P L FS++GE+ E L D+ T KS+G+A Y + + A AL
Sbjct: 166 KIYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVD 225
Query: 105 MDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDEVA 149
K +DGR + +A GK +G P Q P E
Sbjct: 226 -PTKMIDGRQLVCKLAIEGKK------GKTGGPAQAPTGVPGEAG 263
>gi|452822647|gb|EME29664.1| RNA-binding protein [Galdieria sulphuraria]
Length = 187
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 40 YPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDAL 99
Y +S I V NLPF E L F +G +A+V LV+D+ T KSKG+AFI Y Q +
Sbjct: 31 YSHSSYIFVGNLPFELTEGDLLVVFEQYGHIADVHLVRDQDTGKSKGFAFIGYEDQRSTI 90
Query: 100 LALESMDHKNLDGRLIYVD 118
LA+++ + L GR + VD
Sbjct: 91 LAVDNFNGTVLLGRTLRVD 109
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K F+ +G ++E+ D +TKK KG+AF+ Y + A+ A
Sbjct: 390 SGRLFVRNLPYTSTEEDLEKIFAKYGPLSEIHYPIDGLTKKPKGFAFVTYMFPEHAVKAF 449
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 450 AEVDGQVFQGRMLHV 464
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF ++ +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 819 SKILVRNIPFQANKQEIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFLTKQDAKRAF 878
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 879 NALCHSTHLYGRRLVLEWA 897
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQNA 58
Query: 102 LESMDHKNLDGRLIYVDIAK 121
L+ +D + V+ K
Sbjct: 59 LDHFHRSFIDTSRVTVEFCK 78
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ ++NL F+T E L++ FS G V + K + S G+ F++Y + A AL
Sbjct: 719 LFIKNLNFSTTEEMLKEVFSKVGTVKSCTVSKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 778
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ + +DG + V I++
Sbjct: 779 KQLQGSVVDGHKLEVKISE 797
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + E L +EF FG + V+++ D + +SKGY ++++ S DDA ALE+
Sbjct: 255 LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEAR 314
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQDEVADC 151
LD R + VD+ P R G P+Q+ Q + D
Sbjct: 315 HGYTLDNRELRVDLGTPRAQRNDGQ-----TPQQRSNDRQKQYGDT 355
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V N+ F + + + F +G + V+L D T KG+ +++++S ++A A+E++
Sbjct: 363 LFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMENL 422
Query: 106 DHKNLDGRLIYVDIAKP 122
++ GR I +D + P
Sbjct: 423 TGVDIAGRPIRLDYSTP 439
>gi|224055617|ref|XP_002298568.1| predicted protein [Populus trichocarpa]
gi|118486956|gb|ABK95311.1| unknown [Populus trichocarpa]
gi|222845826|gb|EEE83373.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
S + +A RI V NLP+ + L++ FS G+V ++V D T +S+G+ F+ +S+ +
Sbjct: 185 SVFKIAYRIYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSSETE 244
Query: 98 ALLALESMDHKNLDGRLIYVDIAK 121
A+ ++D ++LDGR I V+IA+
Sbjct: 245 LNDAIAALDGQSLDGRAITVNIAQ 268
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ V NLP+ + L + F G V +++ + T +S+G+ F+ ++ D+A A+E
Sbjct: 98 AKLYVGNLPYDVNSENLAQLFDQAGTVEVAEIIYNRETDQSRGFGFVTMSTVDEAEKAIE 157
Query: 104 SMDHKNLDGRLIYVDIAKPGKDR 126
+L+GR + V+ A P R
Sbjct: 158 KFHRYDLNGRFLTVNKAAPRGSR 180
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 53/78 (67%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + L ++T + +L++ F +GEV E +++ D T +S+G+ F+ +TS ++A A+
Sbjct: 39 SSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAI 98
Query: 103 ESMDHKNLDGRLIYVDIA 120
+++D ++L GR + V+ A
Sbjct: 99 QALDGQDLHGRRVRVNYA 116
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
++ + L T E L+ FS FG ++EV L+KD T KS+G+AF+ Y + DA A
Sbjct: 9 KLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAARE 68
Query: 105 MDHKNLDGRLIYVDIA 120
M+ K LDG+ I V+ A
Sbjct: 69 MNGKPLDGKPIKVEQA 84
>gi|429859384|gb|ELA34169.1| pre-rRNA processing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 866
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 36 SLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQ 95
+L+ SR+ RNL ++ +E L+ F FGE+ EV L T SKGYA +Q+T+
Sbjct: 331 TLATIKRTSRLFARNLAYSVNEEDLRAHFEQFGELQEVHLPV-TATGASKGYAMVQFTNA 389
Query: 96 DDALLALESMDHKNLDGRLIYV 117
D A+ A +S D + GRL+++
Sbjct: 390 DSAVTAFQSSDGQTFQGRLLHI 411
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++I+++NLPF + ++ FS +G++ V+L K + ++G+AF ++ + +A AL
Sbjct: 742 TKIVIKNLPFEATKKDIRTLFSTYGQLRAVRLPK-KFGNSTRGFAFAEFVTPREAENALN 800
Query: 104 SMDHKNLDGRLIYVD 118
++ +L GR + +D
Sbjct: 801 ALRDTHLLGRKLVLD 815
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK-----SKGYAFIQYTSQDDALL 100
+ VRNL F+T L + F ++ KK S G+ F+ + +++ A
Sbjct: 639 LFVRNLNFSTTTEKLAETFKPLDGFVSARVKTKMDPKKPGQVLSMGFGFVVFKTKEQAST 698
Query: 101 ALESMDHKNLDGRLIYVDIAKPGKD 125
AL+SMD LDG + V + G+D
Sbjct: 699 ALKSMDGFVLDGHTLAVKASHKGQD 723
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D TK+S+G++F+++ + DA A+++M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 76 DGAVLDGRELRVQMARYGR 94
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS +GE+ + K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 53/80 (66%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++ V NL ++T ++L + F+ +GEV + +++D T +S+G+ FI +++QD A A+
Sbjct: 4 GNKLFVGNLAWSTDTNSLTQAFNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQAAI 63
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
++++ ++DGR I V+ A
Sbjct: 64 DALNEADVDGRNIRVNFATS 83
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 16 FANSLTNRENPCFRTFNLRASLSNYPL--------ASRIMVRNLPFTTHEHTLQKEFSAF 67
F N L N + N + SLS+ L +S++ + + ++ E +L++ F+ +
Sbjct: 7 FGNILKQTTN---KQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKY 63
Query: 68 GEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA 120
GEV + +++ D T +S+G+ F+ +TS + A A++++D ++L GR++ V+ A
Sbjct: 64 GEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYA 116
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 52/81 (64%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NLP++ + +++ FS FG V+ K++ + T +SKG+ F++ +S +A A
Sbjct: 1 MGNKLYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+E M+ + + GR + V+ A+P
Sbjct: 61 IEGMNGQQIGGRGLVVNEARP 81
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V N+P+ E L+ FS G V +LV D T K KGY F +Y Q+ AL A+ ++
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 76
Query: 106 DHKNLDGRLIYVDIAKPGKDRFG-GYPRTSGPPKQQPLSE 144
L+GR + VD A K++ + SGPP + P E
Sbjct: 77 SGYELNGRQLRVDNAASEKNKEELKILQASGPPVESPFGE 116
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 50/77 (64%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
+++ + L + T + TL+ F FG + E ++KD T +S+G+ F+++++ +A A+E
Sbjct: 2 AKLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIE 61
Query: 104 SMDHKNLDGRLIYVDIA 120
M++++ DGR+I VD A
Sbjct: 62 GMNNQDFDGRVIRVDRA 78
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ +RN+P+T E L++ FS G ++EV D +TKK KG+AF+ Y ++A+ AL
Sbjct: 398 SGRLFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSAL 457
Query: 103 ESMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSG 135
+D GR+++V ++ K++ P G
Sbjct: 458 AQLDGHTFQGRVLHVMASRLKKEKADQGPDAPG 490
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S+I+VRN+PF L++ F FGE+ V+L K I +G+ FI + ++ DA A
Sbjct: 805 SKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFS 864
Query: 104 SMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 865 ALCHSTHLYGRRLVLEWA 882
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVK--DEITK-KSKGYAFIQYTSQDDAL 99
S + ++NL F T E TLQK FS G V + K D+ K S GY F+QY + + A
Sbjct: 701 GSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQ 760
Query: 100 LALESMDHKNLDGRLIYVDIAK 121
A+ + H +D + V I++
Sbjct: 761 KAMRQLQHCTVDEHQLEVKISE 782
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E +K F+ FG + + +K KD K + + F+ + +++DA A
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCALKFTKD---GKFRKFGFVGFKTEEDAQKA 58
Query: 102 LESMDHKNLDGRLIYV----DIAKPGKDR 126
L+ + +D + V D P K R
Sbjct: 59 LKHFNKSFVDTSRVTVELCTDFGDPNKAR 87
>gi|297693058|ref|XP_002823848.1| PREDICTED: probable RNA-binding protein 19 [Pongo abelii]
Length = 999
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 440 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 499
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 500 SEVDGQVFQGRMLHV 514
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 871 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQDAKRAF 930
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 931 NALCHSTHLYGRRLVLEWA 949
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 96
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
L+ + +D I V+ K P K R + + + PKQ P
Sbjct: 97 LKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 141
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ ++NL F T E L++ FS G V + K + S G+ F++Y + A AL
Sbjct: 771 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKAL 830
Query: 103 ESMDHKNLDGRLIYVDIAK 121
+ + +DG + V I++
Sbjct: 831 KQLQGHIVDGHKLEVRISE 849
>gi|375265706|ref|YP_005023149.1| RNA-binding protein [Vibrio sp. EJY3]
gi|369841027|gb|AEX22171.1| RNA-binding protein [Vibrio sp. EJY3]
Length = 79
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+++VRNL TT EH ++ FSA+G V E LV D+ T +SKG+AF++ +D+A ALE+
Sbjct: 2 KLLVRNLARTTTEHEIRVLFSAYGTVTECNLVLDQETGQSKGFAFVEMPDKDEAKNALEN 61
Query: 105 MDHKNLDGRLIYVDIAK 121
+ H ++ I V A+
Sbjct: 62 LHHTSVAKSKIRVKFAQ 78
>gi|194868033|ref|XP_001972201.1| GG15393 [Drosophila erecta]
gi|190653984|gb|EDV51227.1| GG15393 [Drosophila erecta]
Length = 917
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ RI RNL +TT+E L+K F FG V EV L D++T+K KG+ + Y + AL A
Sbjct: 363 SGRIFFRNLAYTTNEEELRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAF 422
Query: 103 ESMDHKNLDGRLIYV 117
++D + GRL+++
Sbjct: 423 NTLDGTDFHGRLLHL 437
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKS--KGYAFIQYTSQDDALL 100
++I+VRN+PF ++ F AFGE+ +++ K T + +G+ F+ Y S+ +A
Sbjct: 783 GTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDYMSKAEAKR 842
Query: 101 ALESM 105
A +++
Sbjct: 843 AFDAL 847
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITK-----KSKGYAFIQYTSQDDALL 100
+ +RNL F T + T++K F G + V++ K + KS GY FIQ+ A
Sbjct: 680 LFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSSVAEH 739
Query: 101 ALESMDHKNLDG---RLIYVDIAKPGKDRFGGYPRTSGPPKQ 139
AL+++ ++DG L D +D G R + KQ
Sbjct: 740 ALKNLQLTHIDGNPVELKRSDRVLKTQDNEGSQRRLASQKKQ 781
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S+I V + ++T E L++ FS +GEV + K++ D T +S+G+AF+ +TS ++A A+
Sbjct: 33 SSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAM 92
Query: 103 ESMDHKNLDGRLIYVDIA 120
+ +D ++L GR I V+ A
Sbjct: 93 Q-LDGQDLHGRRIRVNYA 109
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ VRNLP+ + L+ EF FG + EV + D+ T +KG+AFIQY+ D + A
Sbjct: 302 RLFVRNLPYDAQKEDLEAEFERFGNLEEVHIALDKKTGTAKGFAFIQYSDPDSSEQAFVD 361
Query: 105 MDHKNLDGRLIYV 117
D + GRL+++
Sbjct: 362 RDGQTFQGRLLHI 374
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+++I+++NLPF T + ++ F A+G++ V++ K +I + ++G+AF ++T+ +A A+
Sbjct: 698 STKIIIKNLPFETTKKDVRALFGAYGQLRSVRVPK-KIDRAARGFAFAEFTTAKEAQSAM 756
Query: 103 ESMDHKNLDGRLIYVD 118
+++ +L GR + +D
Sbjct: 757 DALRDTHLLGRRLVLD 772
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKK---SKGYAFIQYTSQDDALLAL 102
+ VRNL F+T L + F+ ++ E K+ S G+ F ++ S A AL
Sbjct: 598 LFVRNLNFSTTTKILSEAFTPLDGFLSARVKTREDPKRGTLSMGFGFAEFRSTKQAQAAL 657
Query: 103 ESMDHKNLDGRLIYVDIAKPGKD 125
E+MD L+G + V + G D
Sbjct: 658 ETMDGYTLEGHKLQVRASHKGAD 680
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 48/73 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L + T + L + F+ +GEV E +++ D T +S+G+ F+ + + +DA A+
Sbjct: 39 SSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAI 98
Query: 103 ESMDHKNLDGRLI 115
+++D ++LDGR I
Sbjct: 99 QALDGQDLDGRRI 111
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 48/73 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ V L + T + L + F+ +GEV E +++ D T +S+G+ F+ + + +DA A+
Sbjct: 39 SSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAI 98
Query: 103 ESMDHKNLDGRLI 115
+++D ++LDGR I
Sbjct: 99 QALDGQDLDGRRI 111
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA AL+S+
Sbjct: 16 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALDSL 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 76 DGRMLDGRELRVQMARYGR 94
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 AEVDGQVFQGRMLHV 475
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 825 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGAHRGFGFVDFLTKQDAKRAF 884
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 885 NALCHSTHLYGRRLVLEWA 903
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ FS+FG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFSSFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQTA 58
Query: 102 LESMDHKNLDGRLIYVDIAKPGKD--------RFGGYPRTSGPPKQQPLS 143
L + +D I V+ K D + P PP + P+S
Sbjct: 59 LNHFNKSFIDTSRITVEFCKSFGDPTRPRAWSKHAQKPSQPKPPSKDPIS 108
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E TL++ FS G V + + KK+K G+ F++Y + A
Sbjct: 725 LFIKNLNFDTTEATLKEVFSKVGMVKSCSISR----KKNKAGALLSMGFGFVEYRKPEHA 780
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL + +DG + + I++
Sbjct: 781 QKALRQLQGHVVDGHKLELRISE 803
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 9 VSYPQPMFANSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFG 68
+ Y P AN +R R++ + S P + + V NLPF+ E L + F A G
Sbjct: 325 LDYAAPRQANPQQDRTQDRARSYGDQTS----PESDTLFVGNLPFSATEDALHEVFGAHG 380
Query: 69 EVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
V ++L ++ T + KG+ ++Q++S D+A A +++ L+GR + +D + P
Sbjct: 381 SVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHGALNGHELEGRAVRLDFSTP 434
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + + NL + E LQ+EFS FGE++ V++V D + +S+G+ +++YTS DA A+
Sbjct: 251 SANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADAAKAM 310
Query: 103 ESMDHKNLDGRLIYVDIAKP 122
E+ +LDGR I +D A P
Sbjct: 311 EAKKGTDLDGRTINLDYAAP 330
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S+I V + ++T E L++ FS +GEV + K++ D T +S+G+AF+ +TS ++A A+
Sbjct: 33 SSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAM 92
Query: 103 ESMDHKNLDGRLIYVDIA 120
+ +D ++L GR I V+ A
Sbjct: 93 Q-LDGQDLHGRRIRVNYA 109
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R+ V N+ F+ E+ LQ F FGE+ V+L KDE T +S+GY F+Q+ + A ALE
Sbjct: 274 RLYVGNIHFSIDENDLQSVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEK 332
Query: 105 MDHKNLDGRLIYVDIAKPGKDRF 127
M+ +L GR I V + G D+F
Sbjct: 333 MNGYDLGGRAIRVGL---GNDKF 352
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L ++T + +LQ+ FS +GEV E K++ D T +S+G+ F+ + + A+++
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 69 MNGKMLDGRSITVNPAQ 85
>gi|239908108|ref|YP_002954849.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
gi|239797974|dbj|BAH76963.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
Length = 97
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ ++ V NLPF+T+E ++ F+A+G+V+ VKL+ D T + +G+ F++ D A A
Sbjct: 1 MSKKLYVGNLPFSTNEDEIRDLFAAYGDVSSVKLIVDRETGRLRGFGFVE-MGDDGADAA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDRFGGY 130
++ ++ K GR + V+ A+ + R GGY
Sbjct: 60 MQGLNGKAFGGRDLRVNEAEERQPRAGGY 88
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + + L+ F +GEV+ K++ D+ + +SKG+ F++ S++DA A++ M
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIKEM 79
Query: 106 DHKNLDGRLIYVDIAKPGKD--RFGGYPRTSGPPKQQ 140
++ GR + V+ A+P + GG+ R G +Q
Sbjct: 80 HDSDIKGRQVVVNEARPRNESSNNGGFRRNDGFGDRQ 116
>gi|344267834|ref|XP_003405770.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Loxodonta africana]
Length = 217
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + ++ A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CTRAINNKQLFGRMIKASIA 86
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA AL++M
Sbjct: 16 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 76 DGRLLDGRELRVQMARYGR 94
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA AL++M
Sbjct: 16 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 76 DGRLLDGRELRVQMARYGR 94
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ F GEV ++ + +D T++S+G+AF+++ + DA AL++M
Sbjct: 16 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDAM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D + LDGR + V +A+ G+
Sbjct: 76 DGRLLDGRELRVQMARYGR 94
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 52/79 (65%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL ++T L++ F +GEV ++ + +D+ +++S+G+AF++Y + DA A++SM
Sbjct: 16 LKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRDAEDAMDSM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D DGR + V +A+ G+
Sbjct: 76 DGNLYDGRKLRVQMARYGR 94
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 53/81 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V NL + T + TL++ FS FG+V + +++D T +S+G+ F+ ++S +A A
Sbjct: 1 MSAKVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ ++ + LDGR I V++A
Sbjct: 61 IGGLNEQELDGRRIKVNLANA 81
>gi|441500694|ref|ZP_20982848.1| RNA-binding protein [Fulvivirga imtechensis AK7]
gi|441435535|gb|ELR68925.1| RNA-binding protein [Fulvivirga imtechensis AK7]
Length = 84
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V L + T LQ++F AFGEV+ K++ D T++SKG+ F++ D A A++++
Sbjct: 3 IFVAKLNYRTTSEELQRQFEAFGEVSSAKVIFDRETQRSKGFGFVEMPDDDAAREAIKAL 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ DGR I V A+P
Sbjct: 63 NETEFDGRTIVVKEARP 79
>gi|110597824|ref|ZP_01386107.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
gi|110340549|gb|EAT59032.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
Length = 90
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL ++ E L++ F FGEV+ ++ D+ T +SKG+ F++ + +A A+ +
Sbjct: 3 IYIGNLDYSVTEADLRETFGEFGEVSSASVINDKFTGRSKGFGFVEMANDAEAASAIADL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ +L+GR I V+ AKP ++R
Sbjct: 63 NDSDLNGRTIKVNEAKPREER 83
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 52/79 (65%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL ++T L++ F +GEV ++ + +D+ +++S+G+AF++Y + DA A++SM
Sbjct: 16 LKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRDAEDAMDSM 75
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D DGR + V +A+ G+
Sbjct: 76 DGNLYDGRKLRVQMARYGR 94
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 414 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 473
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 474 SEVDGQVFQGRMLHV 488
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 845 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 904
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 905 NALCHSTHLYGRRLVLEWA 923
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 15 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 71
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 72 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 116
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 745 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGVLLSMGFGFVEYRKPEQA 800
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 801 QKALKQLQGHVVDGHKLEVRISE 823
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 16 FANSLTN-RENPCFRTFNLRASLSNY--PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAE 72
+AN+ TN NP R N S + P + + + N+ F+ E+ +Q+ FS +G +
Sbjct: 313 YANARTNGNANPRERADNRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGAIQG 372
Query: 73 VKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
++L D + + KG+ ++Q++S D+A ALE+ +L GR I +D + P
Sbjct: 373 IRLPTDPESGRPKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTP 422
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
++ + V NL + E L+ EF FGE+A ++V D + +S+G+ ++++ + +DA+ A
Sbjct: 237 SANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRESGRSRGFGYVEFVNVEDAVKAH 296
Query: 103 ESMDHKNLDGRLIYVDIA 120
+ LDGR + +D A
Sbjct: 297 TAKKDAELDGRKMNLDYA 314
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
++VRNL F + L++EF FG V +V + D +T++ +G+AFI+ + + +A A+ +
Sbjct: 15 VLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSCKAEADEAIAGL 74
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
D K+LDGR+I V +A + R
Sbjct: 75 DGKDLDGRVIKVLLAAQKRKR 95
>gi|242279034|ref|YP_002991163.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242121928|gb|ACS79624.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 87
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NLP++ E ++ F A+GEV VKL++D T + +G+ F++ + A+ A
Sbjct: 1 MSKNIYVGNLPWSATEEDVRASFEAYGEVVSVKLIEDRETGRPRGFGFVE-MDDNGAIDA 59
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+E++D K+ GR + V+ A+P
Sbjct: 60 IEALDGKDFGGRNLKVNEARP 80
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E L+ FS FG ++EV L+KD T KS+G+AF+ Y + DA A
Sbjct: 8 GKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPSDAKDAAR 67
Query: 104 SMDHKNLDGRLIYVDIA 120
M+ K LDG+ I V+ A
Sbjct: 68 EMNGKPLDGKPIKVEQA 84
>gi|46446527|ref|YP_007892.1| nucleic acid-binding protein [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400168|emb|CAF23617.1| probable nucleic acid-binding protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 112
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
+I V NL + T E L+ F AFG+V K+V D++T KSKG+ F++ S +DA A+
Sbjct: 3 KIFVGNLSWKTSEEQLKAHFEAFGKVVSAKIVTDQMTGKSKGFGFVEMESANDAENAIRE 62
Query: 105 MDHKNLDGRLIYVDIAKPGKDR--------FGGYPR 132
++ K L R + V +A+ +DR FGG R
Sbjct: 63 LNGKPLVDRSLRVSLAQE-RDRSERREPRSFGGGDR 97
>gi|345567860|gb|EGX50762.1| hypothetical protein AOL_s00054g848 [Arthrobotrys oligospora ATCC
24927]
Length = 130
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
S++ + L + T ++ L+++F FG V + +VKD T +S+G+ F+++++ D+A A E
Sbjct: 2 SKLFIGGLSYGTDDNRLRQKFEEFGVVEDAIVVKDRDTGRSRGFGFVRFSNDDEATAAQE 61
Query: 104 SMDHKNLDGRLIYVDIA 120
+M+ DGR I VD A
Sbjct: 62 AMNDAEFDGRRIRVDKA 78
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 40 YPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDAL 99
Y ++ + V +PF E L FS +GE+ +V LV+D+ T KSKG+AF+ Y Q
Sbjct: 32 YKESAYVFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTN 91
Query: 100 LALESMDHKNLDGRLIYVD 118
LA+++++ + GR+I VD
Sbjct: 92 LAVDNLNGAQILGRIIRVD 110
>gi|123473695|ref|XP_001320034.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121902831|gb|EAY07811.1| hypothetical protein TVAG_312100 [Trichomonas vaginalis G3]
Length = 215
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 34 RASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYT 93
+A + P I + N+PF E L++ F FGEV K+ ++ + SKGY F+ +
Sbjct: 21 QAEKTETPKGVSIHIGNIPFELTEPKLKEIFGKFGEVLSSKIPTNQANR-SKGYGFVSFA 79
Query: 94 SQDDALLALESMDHKNLDGRLIYVDIAK 121
++DA A++SM++ LDGR I V+ AK
Sbjct: 80 LKEDAQKAIDSMNNTELDGRKIEVEFAK 107
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS +GE+ + K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +L+ FS +GE+ E K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAKP 122
M K LDGR I V+ A+
Sbjct: 69 MSGKELDGRNITVNEAQS 86
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana]
gi|330252880|gb|AEC07974.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 116
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 55/83 (66%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+S + V+ + F++ E TL + FS +G+V +V ++ D+I + KG+A++ ++S+++A A
Sbjct: 19 FSSTLFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKA 78
Query: 102 LESMDHKNLDGRLIYVDIAKPGK 124
L ++ + +DGR++ +D K K
Sbjct: 79 LLELNAQLVDGRVVILDTTKAAK 101
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T L++ FS FGEV ++ + +D T +S+G+AF++Y + +A A+ M
Sbjct: 17 LKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFAFVRYCTDREADCAIRGM 76
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D +DGR + V AK G+
Sbjct: 77 DGHKVDGREVRVQRAKYGR 95
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V + + T E L++EF FG + ++ +V ++IT K +GYAF++Y + D A +
Sbjct: 104 LFVARVNYDTSESKLRREFEVFGSIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKHA 163
Query: 106 DHKNLDGRLIYVDIAK 121
D K +DGR + VD+ +
Sbjct: 164 DGKKIDGRRVLVDVER 179
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V L T L++ F+ FGEV ++V D ++ SKG+ F++Y + ++A +E
Sbjct: 37 LFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAKGIEGK 96
Query: 106 DHKNLDGRLIYVDIAKP 122
D K LDG +I+ + AKP
Sbjct: 97 DGKFLDGWVIFAEYAKP 113
>gi|242280537|ref|YP_002992666.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242123431|gb|ACS81127.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 87
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NLP++ E ++ F AFGEV VKL++D T + +G+ F++ A+ A
Sbjct: 1 MSKNIYVGNLPWSATEDEVRAAFEAFGEVVSVKLIEDRETGRPRGFGFVEMEDA-GAMEA 59
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
++++D K+ GR + V+ AKP
Sbjct: 60 IDNLDGKDFGGRNLKVNEAKP 80
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 SEVDGQVFQGRMLHV 475
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 833 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 892
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 893 NALCHSTHLYGRRLVLEWA 911
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 59 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 103
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 733 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGALLSMGFGFVEYRKPEQA 788
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 789 QKALKQLQGHVVDGHKLEVRISE 811
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 SEVDGQVFQGRMLHV 475
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 59 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 103
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGVLLSMGFGFVEYRKPEQA 787
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 788 QKALKQLQGHVVDGHKLEVRISE 810
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS +GE+ + K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L+ FS +GE+ + K++ D T +S+G+ F+ ++S+ A+E
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+++R+L F T +++EF FG + +V L D +++ +G+ F++Y ++DA ALE M
Sbjct: 29 LLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEKM 88
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDG I V A+ G+
Sbjct: 89 DGATLDGVTINVTFAQEGR 107
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 SEVDGQVFQGRMLHV 475
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 59 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 103
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGVLLSMGFGFVEYRKPEQA 787
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 788 QKALKQLQGHVVDGHKLEVRISE 810
>gi|392585482|gb|EIW74821.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 834
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ +RNL F+ E +++ F FG +++V + D T+K KG A++ ++ AL A E
Sbjct: 293 SRLFLRNLTFSCTEEEIREHFQPFGNISQVHIPLDSSTRKPKGVAYVTFSEGASALSAYE 352
Query: 104 SMDHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQ 145
S+D K+ GR++++ P DR P G K++ + +Q
Sbjct: 353 SLDKKSFQGRVLHI---LPAVDRI-PKPEQPGDDKKRSVKDQ 390
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++++V+N+PF + +++ F A G++ V+L K + +S+G+AF+++ ++ +A A
Sbjct: 713 TKMIVKNVPFEASKKDIRELFGAHGQLKSVRLPK-KFDSRSRGFAFLEFLTRQEAENAYA 771
Query: 104 SMDHKNLDGRLIYVDIAK 121
++ H +L GR + + A+
Sbjct: 772 ALRHTHLLGRHLVLQWAE 789
>gi|333999539|ref|YP_004532151.1| RNA-binding protein [Treponema primitia ZAS-2]
gi|333738431|gb|AEF83921.1| RNA-binding protein [Treponema primitia ZAS-2]
Length = 89
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+A ++ V NL + T+E L+ FS +G V VK++ D T SKG+ F++ +++++A A
Sbjct: 1 MAKKLYVGNLSYNTYEDNLRTLFSQYGTVESVKIITDRDTGNSKGFGFVEMSTEEEAQAA 60
Query: 102 LESMDHKNLDGRLIYVDIA 120
+ + +LDGR I V+ A
Sbjct: 61 IRGTNSTDLDGRSIKVNEA 79
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 SEVDGQVFQGRMLHV 475
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 59 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 103
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGVLLSMGFGFVEYRKPEQA 787
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 788 QKALKQLQGHVVDGHKLEVRISE 810
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+++R+L F T +++EF FG + +V L D +++ +G+ F++Y ++DA ALE M
Sbjct: 15 LLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEKM 74
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDG I V A+ G+
Sbjct: 75 DGATLDGVTINVTFAQEGR 93
>gi|452851903|ref|YP_007493587.1| RNP-1 like RNA-binding protein [Desulfovibrio piezophilus]
gi|451895557|emb|CCH48436.1| RNP-1 like RNA-binding protein [Desulfovibrio piezophilus]
Length = 87
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ + V NL ++T E ++ F+ FGEV VKL++D T + +G+ F++ + A A
Sbjct: 1 MSKNLYVGNLSWSTTEDEVRAAFAEFGEVLSVKLIEDRETGRPRGFGFVEM-DDNGAGDA 59
Query: 102 LESMDHKNLDGRLIYVDIAKPGKDR 126
++++D K+L GR I V++AKP ++R
Sbjct: 60 VDALDGKDLGGRNIKVNVAKPREER 84
>gi|426245729|ref|XP_004016657.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Ovis
aries]
Length = 174
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T E +L+ F +G ++EV L+KD T KS+G+AFI + S DA A+
Sbjct: 8 GKLFIGGLNHETDEKSLEAAFGKYGHISEVLLMKDRETNKSRGFAFITFESPADAKAAVR 67
Query: 104 SMDHKNLDGRLIYV 117
M+ K+LDG+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|374300202|ref|YP_005051841.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
gi|332553138|gb|EGJ50182.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
Length = 101
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ ++ V NLPF+T++ ++ FSA+GEV V L+ D T + +G+ F++ D A A
Sbjct: 1 MSKKLYVGNLPFSTYDEEIRNLFSAYGEVKSVSLITDRETGRLRGFGFVE-MDDDGARAA 59
Query: 102 LESMDHKNLDGRLIYVDIA-----KPGKDRFGGYP 131
+E++D ++ GR + V+ A +P GG P
Sbjct: 60 IEALDGQDFSGRALKVNEAQERAPRPAGGGSGGRP 94
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 35 ASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTS 94
A + RI VRNLP+T E + + F FG+++ V ++ D TK+SKG A++ +
Sbjct: 353 ADMEALSETGRIFVRNLPYTATEEEVAELFEQFGKLSAVHILVDRSTKRSKGLAYVTFAI 412
Query: 95 QDDALLALESMDHKNLDGRLIYV 117
+D + A+E++D GRLI++
Sbjct: 413 PEDGVKAMEAVDGSIFQGRLIHL 435
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
A+++++RN+ F + +QK F+ FG++ +V+L K + +G+AF+++ + + A+
Sbjct: 799 ATKLVIRNVAFEATKRDIQKLFNPFGQLKQVRLPK-KFDGAHRGFAFVEFNTARETQAAM 857
Query: 103 ESMDHKNLDGRLIYVD 118
+++ +L GR + ++
Sbjct: 858 DALKGTHLYGRHVVLE 873
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ V+N+P E L++ F++ GEV +VK+V+ S+ AF+ Y ++ A A++
Sbjct: 33 SRLCVKNVPKHVKEQRLREHFASQGEVTDVKVVR-TADGTSRQMAFVGYKTEKAATRAMK 91
Query: 104 SMDHKNLDGRLIYVDIAK 121
D +D I V A+
Sbjct: 92 YFDKTFIDTSRIEVTYAR 109
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 SEVDGQVFQGRMLHV 475
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 833 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 892
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 893 NALCHSTHLYGRRLVLEWA 911
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 59 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 103
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 733 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGALLSMGFGFVEYRKPEQA 788
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 789 QKALKQLQGHVVDGHKLEVRISE 811
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I V NL + + L+ F AFG+V VK+V+D T +S+G+AF++ + A A+ M
Sbjct: 3 IYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAEM 62
Query: 106 DHKNLDGRLIYVDIAKP 122
+ K+L GR + V+ A+P
Sbjct: 63 NGKDLKGRNLVVNEARP 79
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 SEVDGQVFQGRMLHV 475
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 59 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 103
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGVLLSMGFGFVEYRKPEQA 787
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 788 QKALKQLQGHVVDGHKLEVRISE 810
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+++++ V L + T +++L+ F GEV + K+++D T KS+G+ F+ + S D+A A
Sbjct: 1 MSAKLFVGGLSWGTDDNSLRSAFEQHGEVVDAKVIQDRDTGKSRGFGFVTFASADEAEAA 60
Query: 102 LESMDHKNLDGRLIYVDIA 120
+++ LDGR I VD A
Sbjct: 61 KNALNQTELDGREIRVDSA 79
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AFI + + A+ A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 461 SEVDGQVFQGRMLHV 475
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQKA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDR-FGGYPRTSGPPKQQP 141
+ + +D I V+ K P K R + + + PKQ P
Sbjct: 59 QKHFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPP 103
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSK-------GYAFIQYTSQDDA 98
+ ++NL F T E L++ FS G V + K KK+K G+ F++Y + A
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISK----KKNKAGVLLSMGFGFVEYRKPEQA 787
Query: 99 LLALESMDHKNLDGRLIYVDIAK 121
AL+ + +DG + V I++
Sbjct: 788 QKALKQLQGHVVDGHKLEVRISE 810
>gi|436841541|ref|YP_007325919.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432170447|emb|CCO23818.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 87
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
++ I V NLP++ E ++ F A+GEV VKL++D T + +G+ F++ + AL A
Sbjct: 1 MSKNIYVGNLPWSASEDDVRAAFEAYGEVISVKLIEDRETGRPRGFGFVE-MEDNGALDA 59
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
++++D K+ GR + V+ AKP
Sbjct: 60 IDNLDGKDFGGRNLKVNEAKP 80
>gi|449475152|ref|XP_004154390.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like, partial [Cucumis sativus]
Length = 141
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V N ++ L F FG++A V ++KD T+KS+G AF+Q+ SQDDA+
Sbjct: 66 PSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 125
Query: 101 ALESMDHKNLDGRLI 115
A + M K L+GR++
Sbjct: 126 AAKQMHGKILNGRVL 140
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
++ + L T+E L+ F +G + EV L+KD T +S+G+AFI + + +DA A +
Sbjct: 8 GKLFIGGLNIDTNEKALEAVFGKYGPIIEVLLMKDRETNRSRGFAFITFENPEDAKDATK 67
Query: 104 SMDHKNLDGRLIYVDIA 120
M+ K+LDG+LI V+ A
Sbjct: 68 DMNGKSLDGKLIKVEQA 84
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 16 FANSLTNRENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKL 75
S NR +P NL + A ++ V +L F E +++ F FG++ V L
Sbjct: 107 LTESERNRLHPGDGNLNLPPGVHAPHGAMQLYVGSLHFNLTEADIKQVFEPFGDLEFVDL 166
Query: 76 VKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVD-IAKPGKDRF 127
+D T +SKGYAF+QY +DA +ALE MD L GR + V+ + + G R+
Sbjct: 167 HRDSTTGRSKGYAFVQYKRPEDAKMALEQMDGFELAGRTLRVNTVHEKGTARY 219
>gi|222612603|gb|EEE50735.1| hypothetical protein OsJ_31052 [Oryza sativa Japonica Group]
Length = 118
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 45/69 (65%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S++ + + + T + +L++ F+ +GEV E +++ D T +S+G+ F+ YTS D+A A+
Sbjct: 30 SSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAI 89
Query: 103 ESMDHKNLD 111
MD K +D
Sbjct: 90 TGMDGKVMD 98
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+ R+ VRNLP+T+ E L+K FS +G ++E+ D +TKK KG+AF+ + + A+ A
Sbjct: 407 SGRLFVRNLPYTSTEEDLEKIFSKYGPLSELHYPIDSLTKKPKGFAFVSFMFPEHAVKAY 466
Query: 103 ESMDHKNLDGRLIYV 117
+D + GR+++V
Sbjct: 467 AEVDGQVFQGRMLHV 481
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-TKKSKGYAFIQYTSQDDALLAL 102
S+I+VRN+PF H +++ FS FGE+ V+L K T +G+ F+ + ++ DA A
Sbjct: 838 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRAF 897
Query: 103 ESMDHK-NLDGRLIYVDIA 120
++ H +L GR + ++ A
Sbjct: 898 NALCHSTHLYGRRLVLEWA 916
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAE--VKLVKDEITKKSKGYAFIQYTSQDDALLA 101
SR++V+NLP E ++ F+AFG + + +K KD K + + FI + S+++A A
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD---GKFRKFGFIGFKSEEEAQRA 58
Query: 102 LESMDHKNLDGRLIYVDIAK----PGKDRFGGYPRTSGPPKQ--QPLSEQDEV 148
L +D I V+ + P K R + + + P Q QP ++D V
Sbjct: 59 LNHFHKSFVDTSRITVEFCRSFGDPTKPR--AWSKHAQKPSQAKQPPKDKDSV 109
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 51/79 (64%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ V NL + T TL++ F +G V +V + +D +K+S+G+AF+++ + DA A+++M
Sbjct: 2 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDAM 61
Query: 106 DHKNLDGRLIYVDIAKPGK 124
D LDGR + V +A+ G+
Sbjct: 62 DGALLDGRELRVQMARYGR 80
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLAL 102
+S+I V + ++T E L++ FS +GEV + K++ D T +S+G+AF+ +TS ++A A+
Sbjct: 33 SSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAM 92
Query: 103 ESMDHKNLDGRLIYVDIA 120
+ +D ++L GR I V+ A
Sbjct: 93 Q-LDGQDLHGRRIRVNYA 109
>gi|147840589|emb|CAN72715.1| hypothetical protein VITISV_032469 [Vitis vinifera]
Length = 737
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 38 SNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDD 97
+ Y ++ + V +PF E L FS +GE+ +V LV+D+ T KSKG+AF+ Y Q
Sbjct: 30 AKYKESAYVFVGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRS 89
Query: 98 ALLALESMDHKNLDGRLIYVD 118
LA+++++ + GR+I VD
Sbjct: 90 TNLAVDNLNGAQILGRIIRVD 110
>gi|126339500|ref|XP_001362144.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + ++ A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CSRALNNKQLFGRVIKASIA 86
>gi|58265434|ref|XP_569873.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134109003|ref|XP_776616.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818289|sp|P0CR17.1|MRD1_CRYNB RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|338818290|sp|P0CR16.1|MRD1_CRYNJ RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|50259296|gb|EAL21969.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226105|gb|AAW42566.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 769
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 44 SRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALE 103
SR+ VRNL F T +L FS +G + E L + T + G AF+Q+ + +DAL A +
Sbjct: 221 SRLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNAEDALAAYK 280
Query: 104 SMDHKNLDGRLIYV--DIAKPGKDRFGGYPRTSGPPKQQPLSEQDE 147
++D GRL++V AKPG++ G SG + L ++DE
Sbjct: 281 ALDKTIFQGRLLHVLPGRAKPGQE---GAAAGSGVVDGKVLGKRDE 323
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 43 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEI-----TKKSKGYAFIQYTSQDD 97
+++++V+NLPF + +++ FSA+G++ ++L + + + ++G+AF+++T+ +
Sbjct: 639 STKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTE 698
Query: 98 ALLALESMDHKNLDGRLIYVDIAKPGKD 125
A A+E++ H +L GR + + A G++
Sbjct: 699 AARAMEALKHTHLLGRHLVLQWANEGEE 726
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T + +L + FSA+G++ E K++ D T +S+G+ F+ + + A+E
Sbjct: 9 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEG 68
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ +NLDGR I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|302821717|ref|XP_002992520.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
gi|300139722|gb|EFJ06458.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
Length = 125
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NL F+ L FS G+V +V ++KD +T++SKG AFI +T+++DA
Sbjct: 7 PSKSTVYVSNLDFSLTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEK 66
Query: 101 ALESMDHKNLDGRLIYVDIAK 121
A+++MD L+ R + V IA+
Sbjct: 67 AVKAMDGVVLNKRTLKVSIAQ 87
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
+ + NL + E L+ EF FGE+A V++V D + +SKG+ ++++T+ +DA+ A +
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 292
Query: 106 DHKNLDGRLIYVDIAKPGKDRFGGYPRTSGPPKQQPLSEQ 145
LDGR + VD A R PR + Q +Q
Sbjct: 293 KDTELDGRKLNVDFANA---RSNAAPRDRAQSRAQNFGDQ 329
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 16 FANSLTN---RENPCFRTFNLRASLSNYPLASRIMVRNLPFTTHEHTLQKEFSAFGEVAE 72
FAN+ +N R+ R N S P + + + N+ F+ E + + F+ +G +
Sbjct: 306 FANARSNAAPRDRAQSRAQNFGDQKS--PESDTLFIGNIAFSADESMISETFAEYGSILG 363
Query: 73 VKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKP 122
V+L D + + KG+ ++Q++S D+A A ES++ L GR + +D + P
Sbjct: 364 VRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTP 413
>gi|354605413|ref|ZP_09023401.1| hypothetical protein HMPREF9450_02316 [Alistipes indistinctus YIT
12060]
gi|353346955|gb|EHB91233.1| hypothetical protein HMPREF9450_02316 [Alistipes indistinctus YIT
12060]
Length = 109
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%)
Query: 46 IMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESM 105
I + NL F T +LQ F+A+GEV+ ++ D T +S+G+ F++ + + A++++
Sbjct: 3 IYISNLNFATKNDSLQNLFAAYGEVSSANIITDRETGRSRGFGFVEMANDAEGQQAIDAL 62
Query: 106 DHKNLDGRLIYVDIAKPGKDR 126
+ +G++I V++A+P +R
Sbjct: 63 NDTEFEGKVIGVNVARPKTER 83
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 45 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALES 104
R V L + T +H L++ FS FG+V + K++ D T +S+G+ F+ + + A+E
Sbjct: 7 RCFVGGLAWATQDHDLERTFSQFGDVLDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 105 MDHKNLDGRLIYVDIAK 121
M+ K LDGR I V+ A+
Sbjct: 67 MNGKELDGRTITVNEAQ 83
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
Length = 104
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+ +++ V NL + + L++ FS+FGEV ++V D T +SKG+ F+++ A A
Sbjct: 1 MGTKLYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDA 60
Query: 102 LESMDHKNLDGRLIYVDIAKP 122
+ +M+ K+++GR + V+ A+P
Sbjct: 61 INAMNGKDVNGRALTVNEARP 81
>gi|395538109|ref|XP_003771028.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Sarcophilus harrisii]
Length = 217
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 41 PLASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALL 100
P S + V NLPF+ + L + FS +G+V +V ++KD+ T+KSKG AFI + ++ A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQN 66
Query: 101 ALESMDHKNLDGRLIYVDIA 120
++++K L GR+I IA
Sbjct: 67 CSRALNNKQLFGRVIKASIA 86
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 52/79 (65%)
Query: 42 LASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLA 101
+AS++ V NL + T + TL+ F FG++ + +++D T +S+G+ F+ + S +A A
Sbjct: 1 MASKVYVGNLSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSA 60
Query: 102 LESMDHKNLDGRLIYVDIA 120
+++++ + LDGR I V++A
Sbjct: 61 IQALNDQELDGRRIKVNLA 79
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,376,699,449
Number of Sequences: 23463169
Number of extensions: 86585833
Number of successful extensions: 255874
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17374
Number of HSP's successfully gapped in prelim test: 6190
Number of HSP's that attempted gapping in prelim test: 218606
Number of HSP's gapped (non-prelim): 38140
length of query: 153
length of database: 8,064,228,071
effective HSP length: 116
effective length of query: 37
effective length of database: 9,637,467,763
effective search space: 356586307231
effective search space used: 356586307231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)