Your job contains 1 sequence.
>031757
MISLRNSVGMLSNVSRQLIQTISFHGLRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRA
HQILCDLNIGNKLTKELTGVELNSLREEVSRYLTGEDLRRCIKNDVERLVDIQCYRGIRH
SQGLPCRGQRTSTNARTRKGKRVAIPGKKKPTR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031757
(153 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2203216 - symbol:AT1G77750 species:3702 "Arabi... 496 2.0e-47 1
TAIR|locus:2145618 - symbol:EMB3137 "EMBRYO DEFECTIVE 313... 370 4.6e-34 1
UNIPROTKB|A8JDP6 - symbol:PRPS13 "Plastid ribosomal prote... 358 8.5e-33 1
UNIPROTKB|O66486 - symbol:rpsM "30S ribosomal protein S13... 289 1.8e-25 1
UNIPROTKB|Q7NFF2 - symbol:rpsM "30S ribosomal protein S13... 284 5.9e-25 1
UNIPROTKB|O06327 - symbol:rpsM "30S ribosomal protein S13... 281 1.2e-24 1
UNIPROTKB|A9WH90 - symbol:rpsM "30S ribosomal protein S13... 279 2.0e-24 1
UNIPROTKB|O86773 - symbol:rpsM "30S ribosomal protein S13... 279 2.0e-24 1
UNIPROTKB|Q749B0 - symbol:rpsM "30S ribosomal protein S13... 275 5.3e-24 1
UNIPROTKB|Q9RSJ9 - symbol:rpsM "30S ribosomal protein S13... 275 5.3e-24 1
TIGR_CMR|GSU_2834 - symbol:GSU_2834 "ribosomal protein S1... 275 5.3e-24 1
TIGR_CMR|CHY_2284 - symbol:CHY_2284 "ribosomal protein S1... 272 1.1e-23 1
UNIPROTKB|Q89JA6 - symbol:rpsM "30S ribosomal protein S13... 268 2.9e-23 1
TIGR_CMR|SO_0253 - symbol:SO_0253 "ribosomal protein S13"... 266 4.8e-23 1
UNIPROTKB|A6UZL0 - symbol:rpsM "30S ribosomal protein S13... 262 1.3e-22 1
UNIPROTKB|Q9KP05 - symbol:rpsM "30S ribosomal protein S13... 262 1.3e-22 1
TIGR_CMR|DET_0499 - symbol:DET_0499 "ribosomal protein S1... 262 1.3e-22 1
TIGR_CMR|VC_2574 - symbol:VC_2574 "ribosomal protein S13"... 262 1.3e-22 1
TIGR_CMR|BA_0135 - symbol:BA_0135 "ribosomal protein S13"... 258 3.4e-22 1
UNIPROTKB|P20282 - symbol:rpsM "30S ribosomal protein S13... 257 4.3e-22 1
UNIPROTKB|P0A7S9 - symbol:rpsM species:83333 "Escherichia... 255 7.0e-22 1
UNIPROTKB|Q0DPA4 - symbol:Os03g0704000 "Os03g0704000 prot... 254 9.0e-22 1
UNIPROTKB|Q8A499 - symbol:rpsM "30S ribosomal protein S13... 250 2.4e-21 1
TIGR_CMR|SPO_0509 - symbol:SPO_0509 "ribosomal protein S1... 248 3.9e-21 1
UNIPROTKB|Q9X1I5 - symbol:rpsM "30S ribosomal protein S13... 247 4.9e-21 1
UNIPROTKB|Q3KLI8 - symbol:rpsM "30S ribosomal protein S13... 246 6.3e-21 1
TIGR_CMR|CBU_0260 - symbol:CBU_0260 "ribosomal protein S1... 243 1.3e-20 1
TIGR_CMR|CJE_1764 - symbol:CJE_1764 "ribosomal protein S1... 240 2.7e-20 1
TIGR_CMR|CPS_0623 - symbol:CPS_0623 "ribosomal protein S1... 234 1.2e-19 1
UNIPROTKB|Q9XD12 - symbol:rpsM "30S ribosomal protein S13... 232 1.9e-19 1
TIGR_CMR|ECH_0430 - symbol:ECH_0430 "ribosomal protein S1... 232 1.9e-19 1
TIGR_CMR|NSE_0287 - symbol:NSE_0287 "ribosomal protein S1... 229 4.0e-19 1
TIGR_CMR|APH_0301 - symbol:APH_0301 "ribosomal protein S1... 225 1.1e-18 1
POMBASE|SPCC1795.07 - symbol:SPCC1795.07 "mitochondrial r... 209 5.3e-17 1
UNIPROTKB|Q8HCP0 - symbol:rps13 "Ribosomal protein S13" s... 194 2.0e-15 1
UNIPROTKB|Q2F922 - symbol:rps13 "Ribosomal protein S13" s... 171 5.6e-13 1
UNIPROTKB|Q2F974 - symbol:rps13 "Ribosomal protein S13" s... 171 5.6e-13 1
UNIPROTKB|P95986 - symbol:rps13 "30S ribosomal protein S1... 113 1.3e-10 2
UNIPROTKB|Q8TRR2 - symbol:rps13 "30S ribosomal protein S1... 115 1.6e-10 2
UNIPROTKB|Q7R7S0 - symbol:PY07508 "Ribosomal protein S13/... 101 2.7e-10 2
ZFIN|ZDB-GENE-020419-20 - symbol:rps18 "ribosomal protein... 101 3.5e-10 2
GENEDB_PFALCIPARUM|PF11_0272 - symbol:PF11_0272 "ribosoma... 105 7.0e-10 2
UNIPROTKB|Q3T0R1 - symbol:RPS18 "40S ribosomal protein S1... 101 7.1e-10 2
UNIPROTKB|Q5TJE9 - symbol:RPS18 "40S ribosomal protein S1... 101 7.1e-10 2
UNIPROTKB|P62269 - symbol:RPS18 "40S ribosomal protein S1... 101 7.1e-10 2
UNIPROTKB|P62272 - symbol:RPS18 "40S ribosomal protein S1... 101 7.1e-10 2
MGI|MGI:98146 - symbol:Rps18 "ribosomal protein S18" spec... 101 7.1e-10 2
RGD|3595 - symbol:Rps18 "ribosomal protein S18" species:1... 101 7.1e-10 2
UNIPROTKB|A7KIL2 - symbol:RPS18 "Ribosomal protein S18" s... 101 9.0e-10 2
UNIPROTKB|A8HVP2 - symbol:RPS18 "Ribosomal protein S18" s... 108 1.0e-09 2
TAIR|locus:2199670 - symbol:PFL "POINTED FIRST LEAVES" sp... 99 1.1e-09 2
TAIR|locus:2009066 - symbol:AT1G34030 species:3702 "Arabi... 99 1.1e-09 2
TAIR|locus:2005541 - symbol:RPS18C "S18 ribosomal protein... 99 1.1e-09 2
UNIPROTKB|Q90YQ5 - symbol:rps18 "40S ribosomal protein S1... 101 1.1e-09 2
ASPGD|ASPL0000076821 - symbol:AN4468 species:162425 "Emer... 139 1.4e-09 1
CGD|CAL0002110 - symbol:orf19.6406 species:5476 "Candida ... 139 1.4e-09 1
UNIPROTKB|Q8H588 - symbol:OJ1656_E11.108 "Putative riboso... 99 1.7e-09 2
UNIPROTKB|G4MNZ8 - symbol:MGG_05661 "40S ribosomal protei... 102 2.9e-09 2
UNIPROTKB|Q7RXX0 - symbol:NCU00475 "40S ribosomal protein... 102 2.9e-09 2
DICTYBASE|DDB_G0276415 - symbol:rps18 "40S ribosomal prot... 104 3.3e-09 2
RGD|2318487 - symbol:LOC100362298 "ribosomal protein S18-... 98 3.5e-09 2
UNIPROTKB|Q8H590 - symbol:OJ1656_E11.104 "Putative riboso... 99 3.7e-09 2
UNIPROTKB|Q7S2C2 - symbol:NCU09539 "Putative uncharacteri... 134 4.7e-09 1
POMBASE|SPBC16D10.11c - symbol:rps1801 "40S ribosomal pro... 103 5.3e-09 2
POMBASE|SPCC1259.01c - symbol:rps1802 "40S ribosomal prot... 103 5.3e-09 2
UNIPROTKB|Q5B4R2 - symbol:AN4468.2 "Putative uncharacteri... 132 7.6e-09 1
ASPGD|ASPL0000026438 - symbol:AN5441 species:162425 "Emer... 98 1.2e-08 2
UNIPROTKB|Q5B1Y9 - symbol:AN5441.2 "Ribosomal protein S13... 98 1.2e-08 2
WB|WBGene00004487 - symbol:rps-18 species:6239 "Caenorhab... 101 1.2e-08 2
UNIPROTKB|O18240 - symbol:rps-18 "Protein RPS-18" species... 101 1.2e-08 2
UNIPROTKB|Q755U6 - symbol:AER422C "AER422Cp" species:2848... 130 1.2e-08 1
UNIPROTKB|Q756F0 - symbol:AER315C "AER315Cp" species:2848... 97 2.3e-08 2
SGD|S000002858 - symbol:RPS18A "Protein component of the ... 97 7.5e-08 2
SGD|S000004488 - symbol:RPS18B "Protein component of the ... 97 7.5e-08 2
RGD|1561919 - symbol:RGD1561919 "similar to ribosomal pro... 94 3.0e-07 2
SGD|S000005025 - symbol:SWS2 "Putative mitochondrial ribo... 115 4.8e-07 1
FB|FBgn0010411 - symbol:RpS18 "Ribosomal protein S18" spe... 114 6.1e-07 1
UNIPROTKB|F1S4M2 - symbol:RPS18 "40S ribosomal protein S1... 85 9.2e-06 2
UNIPROTKB|J3JS69 - symbol:RPS18 "HCG1777176, isoform CRA_... 101 1.5e-05 1
UNIPROTKB|A8J3J1 - symbol:MRPS13 "Mitochondrial ribosomal... 99 2.4e-05 1
UNIPROTKB|Q9GT46 - symbol:IrpS18 "Ribosomal protein S18" ... 98 3.0e-05 1
RGD|1562404 - symbol:RGD1562404 "similar to ribosomal pro... 77 5.2e-05 2
>TAIR|locus:2203216 [details] [associations]
symbol:AT1G77750 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;IDA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=TAS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0042254 GO:GO:0003735
GO:GO:0019843 EMBL:AC012193 GO:GO:0005763 SUPFAM:SSF46946
eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952 HAMAP:MF_01315
PANTHER:PTHR10871 EMBL:BT010186 IPI:IPI00540022 PIR:D96807
RefSeq:NP_177898.1 UniGene:At.34407 ProteinModelPortal:Q9CA19
SMR:Q9CA19 STRING:Q9CA19 PaxDb:Q9CA19 PRIDE:Q9CA19
EnsemblPlants:AT1G77750.1 GeneID:844111 KEGG:ath:AT1G77750
TAIR:At1g77750 InParanoid:Q9CA19 OMA:RSATTLF
ProtClustDB:CLSN2679459 Genevestigator:Q9CA19 GermOnline:AT1G77750
Uniprot:Q9CA19
Length = 154
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 91/153 (59%), Positives = 120/153 (78%)
Query: 1 MISLRNSVGMLSNVSRQLIQTISFHGLRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRA 60
M+ LR S L ++S+ L++ ++FHGLRVQG+RVGN E+PN+K L+T LQ VYGIGR ++
Sbjct: 1 MLGLRRSATTLFDISQSLLRNVTFHGLRVQGIRVGNAEVPNNKPLKTGLQEVYGIGRRKS 60
Query: 61 HQILCDLNIGNKLTKELTGVELNSLREEVSRYLTGEDLRRCIKNDVERLVDIQCYRGIRH 120
HQ+LC L I NKL ++LTG EL LREEV ++ G++LRR + ++++RLV++ CYRG RH
Sbjct: 61 HQVLCHLGITNKLARDLTGKELIDLREEVGQHQHGDELRRRVGSEIQRLVEVDCYRGSRH 120
Query: 121 SQGLPCRGQRTSTNARTRKGKRVAIPGKKKPTR 153
GLPCRGQRTSTNART+KGK VAI GKKK R
Sbjct: 121 RHGLPCRGQRTSTNARTKKGKAVAIAGKKKAPR 153
>TAIR|locus:2145618 [details] [associations]
symbol:EMB3137 "EMBRYO DEFECTIVE 3137" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IBA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA] [GO:0009773
"photosynthetic electron transport in photosystem I" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PROSITE:PS00646 PROSITE:PS50159
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0006412
GO:GO:0009941 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
EMBL:AL163817 GO:GO:0019843 SUPFAM:SSF46946 EMBL:Z47986 EMBL:X91955
EMBL:X86734 EMBL:AY052738 EMBL:AY039533 EMBL:Z17611 IPI:IPI00535943
PIR:S59594 RefSeq:NP_568299.1 UniGene:At.19669
ProteinModelPortal:P42732 SMR:P42732 STRING:P42732 PaxDb:P42732
PRIDE:P42732 EnsemblPlants:AT5G14320.1 GeneID:831282
KEGG:ath:AT5G14320 GeneFarm:44 TAIR:At5g14320 eggNOG:COG0099
HOGENOM:HOG000039879 InParanoid:P42732 KO:K02952 OMA:REVAMNI
PhylomeDB:P42732 ProtClustDB:CLSN2689668 Genevestigator:P42732
GermOnline:AT5G14320 HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 Uniprot:P42732
Length = 169
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 72/127 (56%), Positives = 95/127 (74%)
Query: 27 LRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLR 86
L ++ RVG EIP +KR+E SLQ+++GIGR+RA QIL DL + NK+TK++ EL LR
Sbjct: 43 LSIRCARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILR 102
Query: 87 EEVSRYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIP 146
+EVS+Y+ DLRR ++RL +IQCYRG+RH QGLPCRGQRT N RT KGK++AI
Sbjct: 103 DEVSKYMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKIAIA 162
Query: 147 GKKKPTR 153
GKKK ++
Sbjct: 163 GKKKVSK 169
>UNIPROTKB|A8JDP6 [details] [associations]
symbol:PRPS13 "Plastid ribosomal protein S13" species:3055
"Chlamydomonas reinhardtii" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005739 "mitochondrion" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005739 GO:GO:0006412 GO:GO:0009941
GO:GO:0042254 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 OMA:REVAMNI
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 EMBL:DS496163
RefSeq:XP_001700563.1 UniGene:Cre.14084 ProteinModelPortal:A8JDP6
SMR:A8JDP6 STRING:A8JDP6 PRIDE:A8JDP6 ProMEX:A8JDP6
EnsemblPlants:EDO98007 GeneID:5726085 KEGG:cre:CHLREDRAFT_195627
ProtClustDB:CLSN2923472 HAMAP:MF_01315_B Uniprot:A8JDP6
Length = 164
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 70/127 (55%), Positives = 85/127 (66%)
Query: 27 LRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLR 86
L + LRV N EIPN KR+E SLQ+++GIG + A IL D + NK T EL E+N LR
Sbjct: 38 LHIMNLRVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGVENKKTYELNEEEINKLR 97
Query: 87 EEVSRYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIP 146
EV +Y T DLRR + +++RL DI CYRG RH GLP RGQRT TNARTRKGK +
Sbjct: 98 SEVEKYTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVA 157
Query: 147 GKKKPTR 153
KKK T+
Sbjct: 158 NKKKATK 164
>UNIPROTKB|O66486 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:224324
"Aquifex aeolicus VF5" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:AE000657 GenomeReviews:AE000657_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 PIR:C70307
RefSeq:NP_213046.1 ProteinModelPortal:O66486 SMR:O66486
GeneID:1192499 KEGG:aae:aq_074 PATRIC:20957847
BioCyc:AAEO224324:GJBH-61-MONOMER Uniprot:O66486
Length = 126
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 62/122 (50%), Positives = 85/122 (69%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTK---ELTGVELNSLREEV 89
R+ ++PN+KRLE +L ++YGIG SRA +I C+ G TK ELT ELN+LR+ +
Sbjct: 3 RIAGVDLPNNKRLEVALTYIYGIGWSRAREI-CE-KTGIPCTKRVGELTPDELNTLRKFI 60
Query: 90 SR-YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGK 148
Y DLRR ++ ++++L D+ CYRGIRH++GLP RGQ+T TNARTRKGKR + G
Sbjct: 61 DENYKVEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRGQQTRTNARTRKGKRKTVGGT 120
Query: 149 KK 150
KK
Sbjct: 121 KK 122
>UNIPROTKB|Q7NFF2 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:251221
"Gloeobacter violaceus PCC 7421" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 SUPFAM:SSF46946 GO:GO:0015935 EMBL:BA000045
GenomeReviews:BA000045_GR eggNOG:COG0099 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:NP_926520.1 ProteinModelPortal:Q7NFF2
SMR:Q7NFF2 GeneID:2601978 KEGG:gvi:gvip484 PATRIC:22046643
BioCyc:GVIO251221:GH9A-3624-MONOMER Uniprot:Q7NFF2
Length = 127
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 60/120 (50%), Positives = 80/120 (66%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVS- 90
R+ +IP +KR+E +L +++GIG SRA QIL I L +ELT V+++ LREE+
Sbjct: 3 RIAGVDIPREKRVEIALTYIFGIGPSRATQILLSTGINPNLRVRELTDVQVSLLREEIEQ 62
Query: 91 RYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
+Y DLRR +++RL+DI C RG RH GLP RGQRT TNARTR+G R + GKKK
Sbjct: 63 KYQVEGDLRRFENINIKRLMDIGCLRGRRHRLGLPVRGQRTRTNARTRRGGRKTVAGKKK 122
>UNIPROTKB|O06327 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005886
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842583 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
PIR:A70566 RefSeq:NP_217977.1 RefSeq:NP_338092.1
RefSeq:YP_006516949.1 ProteinModelPortal:O06327 SMR:O06327
PRIDE:O06327 EnsemblBacteria:EBMYCT00000002449
EnsemblBacteria:EBMYCT00000070559 GeneID:13317067 GeneID:887514
GeneID:926626 KEGG:mtc:MT3567 KEGG:mtu:Rv3460c KEGG:mtv:RVBD_3460c
PATRIC:18129571 TubercuList:Rv3460c Uniprot:O06327
Length = 124
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 56/120 (46%), Positives = 83/120 (69%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVSR 91
R+ ++P DKR+E +L +++GIGR+R+++IL I L T++LT +L LR+ +
Sbjct: 3 RLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEA 62
Query: 92 YLTGE-DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
L E DLRR ++ D+ R ++I CY+G+RH +G+P RGQRT TNARTRKG + I GKKK
Sbjct: 63 NLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGKKK 122
>UNIPROTKB|A9WH90 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:324602
"Chloroflexus aurantiacus J-10-fl" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:CP000909 GenomeReviews:CP000909_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_001635991.1
ProteinModelPortal:A9WH90 SMR:A9WH90 STRING:A9WH90 PRIDE:A9WH90
GeneID:5826857 KEGG:cau:Caur_2393 PATRIC:21415911
BioCyc:CAUR324602:GIXU-2432-MONOMER Uniprot:A9WH90
Length = 127
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 57/124 (45%), Positives = 85/124 (68%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
R+ +IP +K++E ++ ++YGIGRS +IL N+ + ++LT E+ +RE V R
Sbjct: 3 RIAGVDIPRNKKIEIAITYIYGIGRSNGMEILRKANVNPERRVRDLTEEEVGRIREIVDR 62
Query: 92 -YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKR-VAIPGKK 149
Y DLRR ++ +++RL+DI CYRG+RH +G+P RGQRT TNARTR+G+R AI KK
Sbjct: 63 EYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQRTRTNARTRRGRRGQAIGIKK 122
Query: 150 KPTR 153
K T+
Sbjct: 123 KATK 126
>UNIPROTKB|O86773 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:100226
"Streptomyces coelicolor A3(2)" [GO:0003735 "structural constituent
of ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AL939121
GenomeReviews:AL645882_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 PIR:T35556
RefSeq:NP_628885.1 ProteinModelPortal:O86773 SMR:O86773
PhosSite:P11111095 GeneID:1100168 KEGG:sco:SCO4727 PATRIC:23739276
Uniprot:O86773
Length = 126
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 59/121 (48%), Positives = 82/121 (67%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
RV +IP +KR+E +L +V+GIGR+ + Q L + N ++L+ +L ++RE V
Sbjct: 3 RVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYVDN 62
Query: 92 YLTGE-DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
+ E DLRR ++ D+ R V+I Y+G+RH +GLP RGQRTSTNARTRKG R AI GKKK
Sbjct: 63 NIKTEGDLRREVQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGKKK 122
Query: 151 P 151
P
Sbjct: 123 P 123
>UNIPROTKB|Q749B0 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:NP_953877.1 ProteinModelPortal:Q749B0
SMR:Q749B0 GeneID:2687149 KEGG:gsu:GSU2834 PATRIC:22028513
BioCyc:GSUL243231:GH27-2793-MONOMER Uniprot:Q749B0
Length = 122
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 53/120 (44%), Positives = 80/120 (66%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
R+ ++P +KR+E +L +++GIGR+ A +IL + + + T L E+ +R+ + +
Sbjct: 3 RIAGIDLPRNKRIEIALTYIFGIGRTTAQRILAETGVSADTRTDNLAESEVAKIRDYIDK 62
Query: 92 YLTGE-DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
L E DLRR + D++RL+D+ CYRG+RH +GLP RGQRT TNARTRKG + GKKK
Sbjct: 63 NLKVEGDLRRDVSMDIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPARTVAGKKK 122
>UNIPROTKB|Q9RSJ9 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:243230
"Deinococcus radiodurans R1" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:AE000513 GenomeReviews:AE000513_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 PIR:F75312
RefSeq:NP_295848.1 ProteinModelPortal:Q9RSJ9 SMR:Q9RSJ9
GeneID:1799972 KEGG:dra:DR_2125 PATRIC:21631926
BioCyc:DRAD243230:GH46-2493-MONOMER Uniprot:Q9RSJ9
Length = 126
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/123 (43%), Positives = 81/123 (65%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
R+ ++P +KR+E +L ++YGIG +R+ +IL + + K L+ E ++LRE + +
Sbjct: 3 RIAGIDLPREKRVEIALTYIYGIGLTRSKEILARTGVSPDTRVKNLSEAEQSTLREAIEK 62
Query: 92 -YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
Y DLR + +++RL+DI YRG+RH +GLP RGQRT TNARTRKG + + GKKK
Sbjct: 63 TYKVEGDLRNEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGKKK 122
Query: 151 PTR 153
TR
Sbjct: 123 ATR 125
>TIGR_CMR|GSU_2834 [details] [associations]
symbol:GSU_2834 "ribosomal protein S13" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:NP_953877.1
ProteinModelPortal:Q749B0 SMR:Q749B0 GeneID:2687149
KEGG:gsu:GSU2834 PATRIC:22028513
BioCyc:GSUL243231:GH27-2793-MONOMER Uniprot:Q749B0
Length = 122
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 53/120 (44%), Positives = 80/120 (66%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
R+ ++P +KR+E +L +++GIGR+ A +IL + + + T L E+ +R+ + +
Sbjct: 3 RIAGIDLPRNKRIEIALTYIFGIGRTTAQRILAETGVSADTRTDNLAESEVAKIRDYIDK 62
Query: 92 YLTGE-DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
L E DLRR + D++RL+D+ CYRG+RH +GLP RGQRT TNARTRKG + GKKK
Sbjct: 63 NLKVEGDLRRDVSMDIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPARTVAGKKK 122
>TIGR_CMR|CHY_2284 [details] [associations]
symbol:CHY_2284 "ribosomal protein S13" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_361093.1
ProteinModelPortal:Q3A9U1 SMR:Q3A9U1 STRING:Q3A9U1 GeneID:3726461
KEGG:chy:CHY_2284 PATRIC:21277639 HOGENOM:HOG000039878
BioCyc:CHYD246194:GJCN-2283-MONOMER Uniprot:Q3A9U1
Length = 123
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 56/120 (46%), Positives = 80/120 (66%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
R+ ++P DKR+E +L ++YGIGR A+ IL I + K+LT E+ LR+E+ +
Sbjct: 3 RIAGVDLPRDKRVEIALTYIYGIGRPTANVILKKTGINPDTRVKDLTEEEVAKLRDEIEK 62
Query: 92 -YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
Y +LRR + +++RL++I CYRGIRH +GLP RGQRT TNARTRKG R + K+K
Sbjct: 63 NYKVEGELRREVALNIKRLIEIGCYRGIRHRKGLPVRGQRTRTNARTRKGPRRTVGVKRK 122
>UNIPROTKB|Q89JA6 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:224911
"Bradyrhizobium japonicum USDA 110" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 SUPFAM:SSF46946 GO:GO:0015935 EMBL:BA000040
GenomeReviews:BA000040_GR eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:NP_772018.1
ProteinModelPortal:Q89JA6 SMR:Q89JA6 GeneID:1051268
KEGG:bja:bll5378 PATRIC:21194446
BioCyc:BJAP224911:GJEJ-5418-MONOMER Uniprot:Q89JA6
Length = 122
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 56/120 (46%), Positives = 81/120 (67%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
R+ IP +KR+ +LQ+++GIG+ A +IL + I ++ +L+ E+ +RE + R
Sbjct: 3 RIAGVNIPTNKRVLIALQYIHGIGQKIAGEILEKVKIPVDRRVSQLSDAEVLQIREVIDR 62
Query: 92 -YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
YL DLRR + +++RL+D+ CYRG+RH +GLP RGQRT TNARTRKG AI GKKK
Sbjct: 63 DYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKKK 122
>TIGR_CMR|SO_0253 [details] [associations]
symbol:SO_0253 "ribosomal protein S13" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:NP_715893.1 ProteinModelPortal:Q8EK48
SMR:Q8EK48 GeneID:1168136 KEGG:son:SO_0253 PATRIC:23520199
Uniprot:Q8EK48
Length = 118
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 54/114 (47%), Positives = 75/114 (65%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLT-KELTGVELNSLREEVSR 91
R+ IP+ K +L ++GIGR+RA I +I KEL+ ++++LREEV++
Sbjct: 3 RIAGINIPDQKHTVIALTAIFGIGRTRARAICAATSIAETAKIKELSEAQIDTLREEVAK 62
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAI 145
YL DLRR I +++RL+D+ CYRG+RH + LP RGQRT TNARTRKG R I
Sbjct: 63 YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116
>UNIPROTKB|A6UZL0 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:381754
"Pseudomonas aeruginosa PA7" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:CP000744
GenomeReviews:CP000744_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_001346245.1
ProteinModelPortal:A6UZL0 SMR:A6UZL0 STRING:A6UZL0 PRIDE:A6UZL0
GeneID:5355004 KEGG:pap:PSPA7_0859 PATRIC:19823551
BioCyc:PAER381754:GHMY-924-MONOMER Uniprot:A6UZL0
Length = 118
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 53/115 (46%), Positives = 77/115 (66%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC--DLNIGNKLTKELTGVELNSLREEVS 90
R+ IP++K SL ++YG+GR+ A I +N K+ K+L+ +++ LR EV+
Sbjct: 3 RIAGVNIPDNKHTVISLTYIYGVGRTTAQNICAATGVNPAAKI-KDLSDEQIDQLRNEVA 61
Query: 91 RYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAI 145
++ T DLRR I +++RL+D+ CYRG+RH +GLP RGQRT TNARTRKG R I
Sbjct: 62 KHTTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116
>UNIPROTKB|Q9KP05 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 PIR:D82061
RefSeq:NP_232202.1 ProteinModelPortal:Q9KP05 SMR:Q9KP05
DNASU:2615591 GeneID:2615591 KEGG:vch:VC2574 PATRIC:20084174
Uniprot:Q9KP05
Length = 118
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 52/114 (45%), Positives = 74/114 (64%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLT-KELTGVELNSLREEVSR 91
R+ IP+ K +L +YGIG++R+ IL DL I + ELT +++ LR+ V++
Sbjct: 3 RIAGINIPDHKHAVIALTAIYGIGKTRSKAILADLGIAESVKISELTEEQIDQLRDGVAK 62
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAI 145
Y DLRR + +++RL+D+ CYRG+RH + LP RGQRT TNARTRKG R I
Sbjct: 63 YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116
>TIGR_CMR|DET_0499 [details] [associations]
symbol:DET_0499 "ribosomal protein S13" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:YP_181243.1 ProteinModelPortal:Q3Z956
SMR:Q3Z956 STRING:Q3Z956 GeneID:3230223 KEGG:det:DET0499
PATRIC:21608067 BioCyc:DETH243164:GJNF-499-MONOMER Uniprot:Q3Z956
Length = 129
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 51/119 (42%), Positives = 79/119 (66%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVS 90
+R+ T+IP++K++ SLQ+++GIG +R+ ++L + + +LT E+N LRE +
Sbjct: 2 VRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKAIRVNKLTDEEINRLREIID 61
Query: 91 R-YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGK 148
+ Y DLR+ I +++RL+DI CYRG RH LP RGQRT TNARTR+G R + G+
Sbjct: 62 KEYRVEGDLRKEIALNIKRLIDIGCYRGNRHKHNLPVRGQRTKTNARTRRGPRKTVAGR 120
>TIGR_CMR|VC_2574 [details] [associations]
symbol:VC_2574 "ribosomal protein S13" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 PIR:D82061 RefSeq:NP_232202.1
ProteinModelPortal:Q9KP05 SMR:Q9KP05 DNASU:2615591 GeneID:2615591
KEGG:vch:VC2574 PATRIC:20084174 Uniprot:Q9KP05
Length = 118
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 52/114 (45%), Positives = 74/114 (64%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLT-KELTGVELNSLREEVSR 91
R+ IP+ K +L +YGIG++R+ IL DL I + ELT +++ LR+ V++
Sbjct: 3 RIAGINIPDHKHAVIALTAIYGIGKTRSKAILADLGIAESVKISELTEEQIDQLRDGVAK 62
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAI 145
Y DLRR + +++RL+D+ CYRG+RH + LP RGQRT TNARTRKG R I
Sbjct: 63 YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116
>TIGR_CMR|BA_0135 [details] [associations]
symbol:BA_0135 "ribosomal protein S13" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
RefSeq:NP_842703.1 RefSeq:YP_016740.1 RefSeq:YP_026421.1
ProteinModelPortal:P62176 SMR:P62176 DNASU:1085954
EnsemblBacteria:EBBACT00000008086 EnsemblBacteria:EBBACT00000018614
EnsemblBacteria:EBBACT00000020746 GeneID:1085954 GeneID:2819393
GeneID:2850910 KEGG:ban:BA_0135 KEGG:bar:GBAA_0135 KEGG:bat:BAS0135
BioCyc:BANT260799:GJAJ-146-MONOMER
BioCyc:BANT261594:GJ7F-148-MONOMER Uniprot:P62176
Length = 121
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/119 (43%), Positives = 76/119 (63%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVSR 91
R+ +IP DKR+ SL +V+GIGR+ A +IL + I + ++LT EL +R+ + R
Sbjct: 3 RIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDIIDR 62
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
DLRR + +++RL++I YRG+RH +GLP RGQ + NARTRKG R + KKK
Sbjct: 63 IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK 121
>UNIPROTKB|P20282 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0042254
"ribosome biogenesis" evidence=IBA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735
EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 EMBL:L47971 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 EMBL:M26414 EMBL:M13957
PIR:C32307 RefSeq:NP_388022.2 ProteinModelPortal:P20282 SMR:P20282
EnsemblBacteria:EBBACT00000002700 GeneID:938928 KEGG:bsu:BSU01410
PATRIC:18971793 GenoList:BSU01410 BioCyc:BSUB:BSU01410-MONOMER
Uniprot:P20282
Length = 121
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 50/119 (42%), Positives = 75/119 (63%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVSR 91
R+ +IP DKR+ SL +++GIGR+ A Q+L + + ++LT EL +R+ + +
Sbjct: 3 RIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDIIDK 62
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
DLRR + +++RL++I YRGIRH +GLP RGQ + NARTRKG R + KKK
Sbjct: 63 LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK 121
>UNIPROTKB|P0A7S9 [details] [associations]
symbol:rpsM species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 EMBL:U18997 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 PDB:3J00 PDBsum:3J00 PDB:3FIH PDB:3IZV PDB:3IZW
PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 SUPFAM:SSF46946
PDB:3SFS PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ EMBL:X02543 EMBL:M12432
eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631 PDB:4GAS
PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87
PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P
PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF
PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO
PDB:2VHP PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3
PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z
PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13
PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO
PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV
PDB:4GAQ PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M
PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M
PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21
PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10
PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR
PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX
PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV
PDBsum:4GAQ PDBsum:4GD2 ProtClustDB:PRK05179 EMBL:M10213 PIR:A23807
RefSeq:NP_417757.1 RefSeq:YP_492134.1 ProteinModelPortal:P0A7S9
SMR:P0A7S9 DIP:DIP-35855N IntAct:P0A7S9 MINT:MINT-1290225
PaxDb:P0A7S9 PRIDE:P0A7S9 EnsemblBacteria:EBESCT00000003493
EnsemblBacteria:EBESCT00000015980 GeneID:12934445 GeneID:947791
KEGG:ecj:Y75_p3878 KEGG:eco:b3298 PATRIC:32122028 EchoBASE:EB0905
EcoGene:EG10912 BioCyc:EcoCyc:EG10912-MONOMER
BioCyc:ECOL316407:JW3260-MONOMER EvolutionaryTrace:P0A7S9
Genevestigator:P0A7S9 Uniprot:P0A7S9
Length = 118
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 50/114 (43%), Positives = 75/114 (65%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLT-KELTGVELNSLREEVSR 91
R+ IP+ K +L +YG+G++R+ IL I + EL+ ++++LR+EV++
Sbjct: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK 62
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAI 145
++ DLRR I ++RL+D+ CYRG+RH +GLP RGQRT TNARTRKG R I
Sbjct: 63 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116
>UNIPROTKB|Q0DPA4 [details] [associations]
symbol:Os03g0704000 "Os03g0704000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0003735 "structural constituent
of ribosome" evidence=IBA] [GO:0005739 "mitochondrion"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416 PROSITE:PS50159
GO:GO:0005739 GO:GO:0006412 GO:GO:0042254 EMBL:AP008209
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935
eggNOG:COG0099 KO:K02952 PANTHER:PTHR10871 RefSeq:NP_001051020.2
UniGene:Os.68758 STRING:Q0DPA4 GeneID:4333848 KEGG:osa:4333848
Gramene:Q0DPA4 Uniprot:Q0DPA4
Length = 203
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 49/95 (51%), Positives = 72/95 (75%)
Query: 22 ISFHGLRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVE 81
I GLR++ +R+G EIPN KR+E SLQ+++GIGRSR+ QIL DLN NK+TK+L+ E
Sbjct: 37 IGHGGLRIECIRIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFDNKVTKDLSEEE 96
Query: 82 LNSLREEVSRYLTGEDLRRCIKNDVERLVDIQCYR 116
+ +LR+EV++Y+ DL+R + +ERL +I+CYR
Sbjct: 97 VITLRKEVTKYMIEGDLKRFNRVAIERLKEIRCYR 131
>UNIPROTKB|Q8A499 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:226186
"Bacteroides thetaiotaomicron VPI-5482" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:AE015928 GenomeReviews:AE015928_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:NP_811616.1
ProteinModelPortal:Q8A499 SMR:Q8A499 GeneID:1072473
KEGG:bth:BT_2704 PATRIC:21060349
BioCyc:BTHE226186:GJXV-2758-MONOMER Uniprot:Q8A499
Length = 126
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 53/124 (42%), Positives = 78/124 (62%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEV- 89
+R+ ++P +KR E +L +VYGIGRS + +IL + L K+ T + +RE +
Sbjct: 3 IRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIG 62
Query: 90 SRYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+ Y DLR I+ +++RL+DI CYRG+RH GLP RGQ T NARTRKG++ + KK
Sbjct: 63 AEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVANKK 122
Query: 150 KPTR 153
K T+
Sbjct: 123 KATK 126
>TIGR_CMR|SPO_0509 [details] [associations]
symbol:SPO_0509 "ribosomal protein S13" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946
eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:YP_165771.1 ProteinModelPortal:Q5LW34
SMR:Q5LW34 GeneID:3195393 KEGG:sil:SPO0509 PATRIC:23374281
Uniprot:Q5LW34
Length = 122
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 54/122 (44%), Positives = 78/122 (63%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTK---ELTGVELNSLREEV 89
R+ IP KR+ +L ++ GIG + A I C+ +G T+ EL+ E+ ++RE +
Sbjct: 3 RIAGVNIPTAKRVPIALTYITGIGNTSAKAI-CEA-VGIDATRRVNELSDAEILAIREHI 60
Query: 90 -SRYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGK 148
+ Y DLRR ++ +++RL+D+ CYRG+RH + LP RGQRT TNARTRKG AI GK
Sbjct: 61 DANYSVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120
Query: 149 KK 150
KK
Sbjct: 121 KK 122
>UNIPROTKB|Q9X1I5 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:243274
"Thermotoga maritima MSB8" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:AE000512 GenomeReviews:AE000512_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 PIR:D72247 RefSeq:NP_229275.1
ProteinModelPortal:Q9X1I5 SMR:Q9X1I5 GeneID:897029 KEGG:tma:TM1475
PATRIC:23937906 Uniprot:Q9X1I5
Length = 125
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/121 (42%), Positives = 80/121 (66%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
R+ E+PN+K++ +L ++YGIGRSR+ +IL + I K +LT E++ + + +
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKITKYIQD 62
Query: 92 YLTGE-DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVA-IPGKK 149
+ E +LR ++ ++ RL++I CYRGIRH GLP RGQ+T +NARTRKG R + I KK
Sbjct: 63 HFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRKGPRPSRIKTKK 122
Query: 150 K 150
K
Sbjct: 123 K 123
>UNIPROTKB|Q3KLI8 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:315277
"Chlamydia trachomatis A/HAR-13" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:CP000051 GenomeReviews:CP000051_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_328332.1
ProteinModelPortal:Q3KLI8 SMR:Q3KLI8 STRING:Q3KLI8 GeneID:3687704
KEGG:cta:CTA_0558 PATRIC:32023022
BioCyc:CTRA315277:GI4C-584-MONOMER Uniprot:Q3KLI8
Length = 122
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 53/120 (44%), Positives = 76/120 (63%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEV-S 90
R+ +IP K+L+ SL ++YGIG + + +I+ L + + ELT E+ L + S
Sbjct: 3 RIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALLQS 62
Query: 91 RYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
Y+ DLRR +++D++RL+ I YRG RH LP RGQRT TN+RTRKGKR + GKKK
Sbjct: 63 DYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGKKK 122
>TIGR_CMR|CBU_0260 [details] [associations]
symbol:CBU_0260 "ribosomal protein S13/S18" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
RefSeq:NP_819304.1 ProteinModelPortal:P59753 SMR:P59753
GeneID:1208141 KEGG:cbu:CBU_0260 PATRIC:17929213
BioCyc:CBUR227377:GJ7S-267-MONOMER Uniprot:P59753
Length = 119
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 53/114 (46%), Positives = 70/114 (61%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVSR 91
R+ IP K +LQ +YGIG SRA +I + I K+L+ EL++LR EV +
Sbjct: 4 RIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVGK 63
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAI 145
+ DLRR D++R +D+ Y GIRH +GLP RGQRT +NARTRKGKR I
Sbjct: 64 FSVEGDLRRERSMDIKRKMDLGAYEGIRHRRGLPLRGQRTRSNARTRKGKRKPI 117
>TIGR_CMR|CJE_1764 [details] [associations]
symbol:CJE_1764 "ribosomal protein S13/S18" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
RefSeq:YP_179736.1 ProteinModelPortal:Q5HSJ9 SMR:Q5HSJ9
STRING:Q5HSJ9 GeneID:3232391 KEGG:cjr:CJE1764 PATRIC:20045338
BioCyc:CJEJ195099:GJC0-1794-MONOMER Uniprot:Q5HSJ9
Length = 121
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/118 (40%), Positives = 75/118 (63%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVSR 91
R+ ++P KR+E L ++YGIG + +IL + I +K EL+ E ++R+E+
Sbjct: 3 RIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRVHELSEDEAAAIRKEIQE 62
Query: 92 -YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGK 148
Y+ DLR+ + D++ L+D+ +RG+RH +GLP RGQ+T TNARTRKGKR + K
Sbjct: 63 NYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120
>TIGR_CMR|CPS_0623 [details] [associations]
symbol:CPS_0623 "ribosomal protein S13" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946
eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:YP_267373.1 ProteinModelPortal:Q488Z1
SMR:Q488Z1 STRING:Q488Z1 PRIDE:Q488Z1 GeneID:3519508
KEGG:cps:CPS_0623 PATRIC:21464573
BioCyc:CPSY167879:GI48-710-MONOMER Uniprot:Q488Z1
Length = 118
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 51/115 (44%), Positives = 69/115 (60%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTK--ELTGVELNSLREEVS 90
R+ IP+ K ++ +YGIG +RA I I TK EL +++ LR EV
Sbjct: 3 RIAGINIPDRKHAVIAITAIYGIGATRAKAICAATGIAES-TKISELDEAKIDLLRAEVD 61
Query: 91 RYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAI 145
++ DLRR + +++RL+D+ CYRGIRH + LP RGQRT TNARTRKG R I
Sbjct: 62 KFTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116
>UNIPROTKB|Q9XD12 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:189518
"Leptospira interrogans serovar Lai str. 56601" [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0042254
"ribosome biogenesis" evidence=IBA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 GO:GO:0015935
EMBL:AE010300 GenomeReviews:AE010300_GR eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
EMBL:AF115283 RefSeq:NP_710943.1 ProteinModelPortal:Q9XD12
SMR:Q9XD12 PaxDb:Q9XD12 PRIDE:Q9XD12 GeneID:1150105
KEGG:lil:LA_0762 PATRIC:22382384 BioCyc:LINT189518:GJBB-621-MONOMER
Uniprot:Q9XD12
Length = 125
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 49/123 (39%), Positives = 75/123 (60%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVSR 91
R+ ++P +KR+ L +++GIG S + IL I + K+L + ++R+ +
Sbjct: 3 RIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTLEE 62
Query: 92 YLTGE-DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKKK 150
E DLR I+ +++RL+DI CYRG+RH +GLP GQRT TNARTRKG + + KKK
Sbjct: 63 TAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKGGKKTVANKKK 122
Query: 151 PTR 153
T+
Sbjct: 123 VTK 125
>TIGR_CMR|ECH_0430 [details] [associations]
symbol:ECH_0430 "ribosomal protein S13" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_507248.1
ProteinModelPortal:Q2GH35 SMR:Q2GH35 STRING:Q2GH35 GeneID:3927582
KEGG:ech:ECH_0430 PATRIC:20576337
BioCyc:ECHA205920:GJNR-431-MONOMER Uniprot:Q2GH35
Length = 123
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 49/121 (40%), Positives = 76/121 (62%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEV-S 90
R+ IP +KR+ +L ++YGIG S A++I NI + + L+ E+ +R +
Sbjct: 3 RIAGVNIPTNKRIVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFIRE 62
Query: 91 RYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGK-RVAIPGKK 149
Y+ DLR+ + +++ L DI CYRG+RH +GLP RGQRT TNA+TRKG+ ++ + KK
Sbjct: 63 NYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAAKK 122
Query: 150 K 150
K
Sbjct: 123 K 123
>TIGR_CMR|NSE_0287 [details] [associations]
symbol:NSE_0287 "ribosomal protein S13" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR
SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:YP_506178.1 ProteinModelPortal:Q2GEB8
SMR:Q2GEB8 STRING:Q2GEB8 PRIDE:Q2GEB8 GeneID:3932234
KEGG:nse:NSE_0287 PATRIC:22680667
BioCyc:NSEN222891:GHFU-314-MONOMER Uniprot:Q2GEB8
Length = 123
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 51/122 (41%), Positives = 75/122 (61%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNI-GNKLTKELTGVELNSLREEVS 90
+R +P++K + +L ++YGIG A +I L I G+ +L +LNS+ +
Sbjct: 1 MRFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIK 60
Query: 91 RYLTGE-DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGK-RVAIPGK 148
+ E +LR+ + ++ LVDI+CYRG+RH + LP RGQRT TNARTRKGK RV I K
Sbjct: 61 NDIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRKGKVRVPIAAK 120
Query: 149 KK 150
K+
Sbjct: 121 KR 122
>TIGR_CMR|APH_0301 [details] [associations]
symbol:APH_0301 "ribosomal protein S13" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
RefSeq:YP_504913.1 ProteinModelPortal:Q2GL38 SMR:Q2GL38
STRING:Q2GL38 GeneID:3931105 KEGG:aph:APH_0301 PATRIC:20949176
ProtClustDB:PRK05179 BioCyc:APHA212042:GHPM-331-MONOMER
Uniprot:Q2GL38
Length = 123
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 51/122 (41%), Positives = 76/122 (62%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQIL--CDLNIGNKLTKELTGVELNSLREEVS 90
R+G +P DKR+ +L ++YGIG S A++I C ++ N L+ ++ +R +
Sbjct: 3 RIGGVNVPVDKRVVVALTYIYGIGTSLANRICEGCGID-KNVRVSALSEEDVVKIRNFIR 61
Query: 91 RYLTGE-DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKG-KRVAIPGK 148
E DLR+ + +++ L+DI CYRG+RH + LP RGQRT TNARTRKG R+A+ K
Sbjct: 62 AGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGSRLAVAAK 121
Query: 149 KK 150
KK
Sbjct: 122 KK 123
>POMBASE|SPCC1795.07 [details] [associations]
symbol:SPCC1795.07 "mitochondrial ribosomal protein
subunit S37 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0032543 "mitochondrial translation"
evidence=ISO] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 PomBase:SPCC1795.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0032543
GO:GO:0019843 GO:GO:0005763 SUPFAM:SSF46946 eggNOG:COG0099
KO:K02952 HAMAP:MF_01315 PANTHER:PTHR10871 HOGENOM:HOG000039878
OMA:RSATTLF PIR:T41136 RefSeq:NP_588037.1 ProteinModelPortal:O59772
STRING:O59772 EnsemblFungi:SPCC1795.07.1 GeneID:2538943
KEGG:spo:SPCC1795.07 OrthoDB:EOG4WHCWG NextBio:20800119
Uniprot:O59772
Length = 151
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 45/102 (44%), Positives = 63/102 (61%)
Query: 39 IPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVSRYLTGED 97
+ +DK + +L YGIG ++A +I L+ N L +ELT V+L +L + +S D
Sbjct: 9 VNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTLSQLLSGMTIEGD 68
Query: 98 LRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRK 139
LRR D+ RLV+I+CYRG+RH GLP GQ T TNA+T K
Sbjct: 69 LRRQRNADISRLVNIRCYRGMRHVNGLPVNGQNTRTNAKTAK 110
>UNIPROTKB|Q8HCP0 [details] [associations]
symbol:rps13 "Ribosomal protein S13" species:39947 "Oryza
sativa Japonica Group" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005739 "mitochondrion"
evidence=IC;IBA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0042254
"ribosome biogenesis" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005739 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 EMBL:BA000029 GenomeReviews:BA000029_GR
SUPFAM:SSF46946 GO:GO:0015935 KO:K02952 PANTHER:PTHR10871
RefSeq:YP_002000577.1 ProteinModelPortal:Q8HCP0 STRING:Q8HCP0
GeneID:6450193 KEGG:osa:6450193 Gramene:Q8HCP0 Uniprot:Q8HCP0
Length = 116
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 43/108 (39%), Positives = 68/108 (62%)
Query: 34 VGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNI-GNKLTKELTGVELNSLREEVSR- 91
+G +P D+++ +L + GIG +A Q+ L I GN ELT +++ + + +++
Sbjct: 5 LGARLLP-DEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKMNELTKYQIDQIEQMIAQD 63
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRK 139
++ +L+R + D+ERL+ I CYRGIRH GLP RGQRT TNART +
Sbjct: 64 HVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTAR 111
>UNIPROTKB|Q2F922 [details] [associations]
symbol:rps13 "Ribosomal protein S13" species:39947 "Oryza
sativa Japonica Group" [GO:0005739 "mitochondrion" evidence=IC]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:DQ167807 EMBL:DQ167400 SUPFAM:SSF46946
eggNOG:COG0099 HOGENOM:HOG000039879 PANTHER:PTHR10871
ProteinModelPortal:Q2F922 STRING:Q2F922 Gramene:Q2F922 OMA:NARTARK
Uniprot:Q2F922
Length = 116
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 40/107 (37%), Positives = 64/107 (59%)
Query: 35 GNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNI-GNKLTKELTGVELNSLREEVSR-Y 92
G +P D+++ + + GIG +A Q+ L I GN ELT +++ + + +++ +
Sbjct: 6 GARSLP-DEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMIAQDH 64
Query: 93 LTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRK 139
+ +L+R + D+ERL+ I YRGIRH G P RGQRT TNART +
Sbjct: 65 VVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTAR 111
>UNIPROTKB|Q2F974 [details] [associations]
symbol:rps13 "Ribosomal protein S13" species:39946 "Oryza
sativa Indica Group" [GO:0005739 "mitochondrion" evidence=IC]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:DQ167399 SUPFAM:SSF46946 PANTHER:PTHR10871
EMBL:JN861111 EMBL:JN861112 EMBL:JF281153 EMBL:JF281154
EMBL:AP011077 RefSeq:YP_514659.1 ProteinModelPortal:Q2F974
GeneID:3950763 Gramene:Q2F974 Uniprot:Q2F974
Length = 116
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 40/107 (37%), Positives = 64/107 (59%)
Query: 35 GNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNI-GNKLTKELTGVELNSLREEVSR-Y 92
G +P D+++ + + GIG +A Q+ L I GN ELT +++ + + +++ +
Sbjct: 6 GARSLP-DEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMIAQDH 64
Query: 93 LTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRK 139
+ +L+R + D+ERL+ I YRGIRH G P RGQRT TNART +
Sbjct: 65 VVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTAR 111
>UNIPROTKB|P95986 [details] [associations]
symbol:rps13 "30S ribosomal protein S13" species:273057
"Sulfolobus solfataricus P2" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019977 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE006641
GenomeReviews:AE006641_GR GO:GO:0019843 EMBL:Y08257 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI ProtClustDB:PRK04053
TIGRFAMs:TIGR03629 PIR:S75414 RefSeq:NP_341646.1
ProteinModelPortal:P95986 GeneID:1455327 KEGG:sso:SSO0074
HOGENOM:HOG000039877 Uniprot:P95986
Length = 165
Score = 113 (44.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 92 YLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+L DL ++ND+ER + +RG+RHS GL RGQRT T RT G + + KK
Sbjct: 93 HLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVRGQRTRTTGRT--GMTIGVARKK 148
Score = 48 (22.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NKLTKELTGVELNSLREEVS 90
+R+ ++ +L +L V GIG + A I+ L + N EL+ E+ + +S
Sbjct: 9 VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVKKVESVIS 68
>UNIPROTKB|Q8TRR2 [details] [associations]
symbol:rps13 "30S ribosomal protein S13" species:188937
"Methanosarcina acetivorans C2A" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019977 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AE010299 GenomeReviews:AE010299_GR SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 HAMAP:MF_01315
PANTHER:PTHR10871 RefSeq:NP_616052.1 ProteinModelPortal:Q8TRR2
GeneID:1472997 KEGG:mac:MA1108 OMA:FQHILRI ProtClustDB:PRK04053
BioCyc:MACE188937:GI2O-1171-MONOMER TIGRFAMs:TIGR03629
Uniprot:Q8TRR2
Length = 162
Score = 115 (45.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 91 RYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++L G D+ + D+ L ++ YRG+RH +GL RGQRT + R +G V + KK
Sbjct: 106 KHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRGQRTKSTGR--RGSTVGVSRKK 162
Score = 45 (20.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQI 63
+R+ NT++ K ++ +L + G+GR A I
Sbjct: 24 VRIMNTDLQGAKPVQYALTGLPGVGRRTAKLI 55
>UNIPROTKB|Q7R7S0 [details] [associations]
symbol:PY07508 "Ribosomal protein S13/S18" species:73239
"Plasmodium yoelii yoelii" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935
eggNOG:COG0099 PANTHER:PTHR10871 KO:K02964 EMBL:AABL01002777
RefSeq:XP_728420.1 ProteinModelPortal:Q7R7S0 SMR:Q7R7S0
STRING:Q7R7S0 GeneID:3800630 KEGG:pyo:PY07508
EuPathDB:PlasmoDB:PY07508 Uniprot:Q7R7S0
Length = 156
Score = 101 (40.6 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 85 LREEVSRYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVA 144
+++ + ++ L ++ D+ER+ I+ +RG+RH GL RGQ T T R +G+ V
Sbjct: 92 IKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRVRGQHTKTTGR--RGRTVG 149
Query: 145 IPGKK 149
+ KK
Sbjct: 150 VAKKK 154
Score = 75 (31.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 14 VSRQLIQTISFHGLRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NK 72
+S Q+I FH + LR+ NT + +++ +L + GIG+ A+ I N+ K
Sbjct: 1 MSLQVIDQNDFHHI----LRILNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTK 56
Query: 73 LTKELTGVELNSL 85
ELT E+N++
Sbjct: 57 RAGELTTEEINNI 69
>ZFIN|ZDB-GENE-020419-20 [details] [associations]
symbol:rps18 "ribosomal protein S18" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IBA] [GO:0006412
"translation" evidence=IEA;IBA] [GO:0015935 "small ribosomal
subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IMP]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
ZFIN:ZDB-GENE-020419-20 GO:GO:0007275 GO:GO:0005829 GO:GO:0006412
GO:GO:0042254 GO:GO:0051726 GO:GO:0003735 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:AY099517 EMBL:BC062289 EMBL:AF210641
IPI:IPI00490073 RefSeq:NP_775341.1 UniGene:Dr.76001
ProteinModelPortal:Q8JGS9 SMR:Q8JGS9 STRING:Q8JGS9 PRIDE:Q8JGS9
Ensembl:ENSDART00000017975 GeneID:192300 KEGG:dre:192300
InParanoid:Q8JGS9 NextBio:20797141 ArrayExpress:Q8JGS9 Bgee:Q8JGS9
Uniprot:Q8JGS9
Length = 152
Score = 101 (40.6 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 72 (30.4 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQIL--CDLNIGNKLTKELTGVEL 82
LRV NT I +++ ++ + G+GR AH +L D+++ NK ELT E+
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDL-NKRAGELTEDEV 64
>GENEDB_PFALCIPARUM|PF11_0272 [details] [associations]
symbol:PF11_0272 "ribosomal protein S18,
putative" species:5833 "Plasmodium falciparum" [GO:0015935 "small
ribosomal subunit" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 EMBL:AE014186
SUPFAM:SSF46946 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 ProtClustDB:PTZ00134 RefSeq:XP_001347943.1
ProteinModelPortal:Q8IIA2 SMR:Q8IIA2 IntAct:Q8IIA2
MINT:MINT-1584243 PRIDE:Q8IIA2 EnsemblProtists:PF11_0272:mRNA
GeneID:810819 KEGG:pfa:PF11_0272 EuPathDB:PlasmoDB:PF3D7_1126200
Uniprot:Q8IIA2
Length = 156
Score = 105 (42.0 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 85 LREEVSRYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVA 144
L+E + ++ L ++ D+ER+ I+ +RG+RH GL RGQ T T R +G+ V
Sbjct: 92 LKEGKNIHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRVRGQHTKTTGR--RGRTVG 149
Query: 145 IPGKK 149
+ KK
Sbjct: 150 VAKKK 154
Score = 60 (26.2 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 14 VSRQLIQTISFHGLRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIG-NK 72
+S Q+I F + LR+ NT + +++ +L + GIG+ A I N+ K
Sbjct: 1 MSLQVIDNNDFQHI----LRILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTK 56
Query: 73 LTKELTGVELNSL 85
ELT E++++
Sbjct: 57 RAGELTTEEIDNI 69
>UNIPROTKB|Q3T0R1 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=ISS;IBA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 GO:GO:0022627
SUPFAM:SSF46946 eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 EMBL:BC102293 IPI:IPI00689850
RefSeq:NP_001028786.1 UniGene:Bt.15275 ProteinModelPortal:Q3T0R1
SMR:Q3T0R1 STRING:Q3T0R1 PRIDE:Q3T0R1 Ensembl:ENSBTAT00000003431
GeneID:326602 KEGG:bta:326602 CTD:6222 HOVERGEN:HBG000200
InParanoid:Q3T0R1 OrthoDB:EOG4KSPM2 NextBio:20809664
ArrayExpress:Q3T0R1 Uniprot:Q3T0R1
Length = 152
Score = 101 (40.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 69 (29.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV NT I +++ ++ + G+GR AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
>UNIPROTKB|Q5TJE9 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9615
"Canis lupus familiaris" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS;IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AJ630366 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 PDB:2ZKQ PDBsum:2ZKQ OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 GeneTree:ENSGT00390000012691
CTD:6222 HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 RefSeq:NP_001041547.1
UniGene:Cfa.6430 ProteinModelPortal:Q5TJE9 SMR:Q5TJE9 STRING:Q5TJE9
PRIDE:Q5TJE9 Ensembl:ENSCAFT00000001473 GeneID:403685
KEGG:cfa:403685 InParanoid:Q5TJE9 EvolutionaryTrace:Q5TJE9
NextBio:20817189 Uniprot:Q5TJE9
Length = 152
Score = 101 (40.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 69 (29.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV NT I +++ ++ + G+GR AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
>UNIPROTKB|P62269 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA;TAS] [GO:0006412 "translation"
evidence=IC;IBA;TAS] [GO:0015935 "small ribosomal subunit"
evidence=IDA;IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005840
"ribosome" evidence=NAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
Reactome:REACT_116125 EMBL:CH471081 GO:GO:0000184 GO:GO:0006413
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 EMBL:AL031228
EMBL:AL645940 EMBL:AL844527 EMBL:AL662827 EMBL:AL662820
EMBL:CR759817 EMBL:CR759786 GO:GO:0006415 EMBL:AL713971
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 SUPFAM:SSF46946
GO:GO:0006614 GO:GO:0019083 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
CTD:6222 HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 EMBL:X69150
EMBL:BC101786 EMBL:BC101788 EMBL:BC106063 IPI:IPI00013296
PIR:S30393 RefSeq:NP_072045.1 UniGene:Hs.448854 UniGene:Hs.627414
ProteinModelPortal:P62269 SMR:P62269 IntAct:P62269
MINT:MINT-1151113 STRING:P62269 PhosphoSite:P62269 DMDM:50403625
PaxDb:P62269 PeptideAtlas:P62269 PRIDE:P62269
Ensembl:ENST00000211372 Ensembl:ENST00000434122
Ensembl:ENST00000439602 Ensembl:ENST00000454021
Ensembl:ENST00000457341 GeneID:6222 KEGG:hsa:6222 UCSC:uc003odp.1
GeneCards:GC06P033240 HGNC:HGNC:10401 HPA:HPA050159 MIM:180473
neXtProt:NX_P62269 PharmGKB:PA34801 InParanoid:P62269
PhylomeDB:P62269 GenomeRNAi:6222 NextBio:24155 ArrayExpress:P62269
Bgee:P62269 CleanEx:HS_RPS18 Genevestigator:P62269
GermOnline:ENSG00000182498 Uniprot:P62269
Length = 152
Score = 101 (40.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 69 (29.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV NT I +++ ++ + G+GR AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
>UNIPROTKB|P62272 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:AB000911 RefSeq:NP_999105.1
UniGene:Ssc.53782 ProteinModelPortal:P62272 SMR:P62272
STRING:P62272 PRIDE:P62272 Ensembl:ENSSSCT00000001675 GeneID:396980
KEGG:ssc:396980 Uniprot:P62272
Length = 152
Score = 101 (40.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 69 (29.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV NT I +++ ++ + G+GR AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
>MGI|MGI:98146 [details] [associations]
symbol:Rps18 "ribosomal protein S18" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=ISO;IBA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IBA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 MGI:MGI:98146
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735
GO:GO:0019843 EMBL:AF110520 EMBL:AF100956 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964 CTD:6222
HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 EMBL:M76763 EMBL:M76762
EMBL:AK050626 EMBL:BC081459 EMBL:BC081458 IPI:IPI00317590
PIR:I76666 RefSeq:NP_035426.1 UniGene:Mm.298745 UniGene:Mm.324762
UniGene:Mm.440079 ProteinModelPortal:P62270 SMR:P62270
IntAct:P62270 STRING:P62270 PhosphoSite:P62270 PaxDb:P62270
PRIDE:P62270 Ensembl:ENSMUST00000008812 GeneID:20084 KEGG:mmu:20084
InParanoid:P62270 NextBio:297575 Bgee:P62270 CleanEx:MM_RPS18
Genevestigator:P62270 GermOnline:ENSMUSG00000008668 Uniprot:P62270
Length = 152
Score = 101 (40.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 69 (29.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV NT I +++ ++ + G+GR AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
>RGD|3595 [details] [associations]
symbol:Rps18 "ribosomal protein S18" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IBA;TAS] [GO:0006412 "translation" evidence=IBA] [GO:0006417
"regulation of translation" evidence=NAS] [GO:0015935 "small
ribosomal subunit" evidence=ISO;TAS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 RGD:3595
GO:GO:0006417 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:BX883042 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:X57529 EMBL:BC126072 IPI:IPI00188058
PIR:JH0419 RefSeq:NP_998722.1 RefSeq:XP_002724624.1
RefSeq:XP_002727879.1 UniGene:Rn.199092 UniGene:Rn.42766
ProteinModelPortal:P62271 SMR:P62271 IntAct:P62271 STRING:P62271
PRIDE:P62271 Ensembl:ENSRNOT00000037499 Ensembl:ENSRNOT00000046010
GeneID:100360679 GeneID:294282 KEGG:rno:100360679 KEGG:rno:294282
UCSC:RGD:3595 InParanoid:P62271 NextBio:637886 Genevestigator:P62271
GermOnline:ENSRNOG00000033152 Uniprot:P62271
Length = 152
Score = 101 (40.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 69 (29.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV NT I +++ ++ + G+GR AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
>UNIPROTKB|A7KIL2 [details] [associations]
symbol:RPS18 "Ribosomal protein S18" species:8030 "Salmo
salar" [GO:0015935 "small ribosomal subunit" evidence=ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0022627
SUPFAM:SSF46946 PANTHER:PTHR10871 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:EF427383 EMBL:BT043500 EMBL:BT047156
EMBL:BT047683 EMBL:BT049532 EMBL:BT050180 EMBL:BT058115
EMBL:BT058207 EMBL:BT059815 EMBL:BT059907 EMBL:GQ505858
EMBL:GQ505859 ProteinModelPortal:A7KIL2 SMR:A7KIL2 Uniprot:A7KIL2
Length = 152
Score = 101 (40.6 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 68 (29.0 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQIL--CDLNIGNKLTKELTGVEL 82
LRV NT I +++ ++ + G+GR AH +L D+++ +K ELT E+
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDL-SKRAGELTDDEV 64
>UNIPROTKB|A8HVP2 [details] [associations]
symbol:RPS18 "Ribosomal protein S18" species:3055
"Chlamydomonas reinhardtii" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 GO:GO:0022626 EMBL:DS496110
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 KO:K02964
ProtClustDB:CLSN2681852 RefSeq:XP_001696472.1 UniGene:Cre.8169
ProteinModelPortal:A8HVP2 SMR:A8HVP2 STRING:A8HVP2 PRIDE:A8HVP2
EnsemblPlants:EDP08449 GeneID:5721802 KEGG:cre:CHLREDRAFT_155649
Uniprot:A8HVP2
Length = 153
Score = 108 (43.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 93 LTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
LT L +++D+ERL I+ +RG+RH GL RGQ T T R GK V + KK
Sbjct: 99 LTSSQLDTVMRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRA--GKTVGVAKKK 153
Score = 45 (20.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC 65
LR+ NT + ++ ++ + GIGR R ++C
Sbjct: 14 LRLLNTNVDGKNKIMYAMTAIRGIGR-RFSNLVC 46
>TAIR|locus:2199670 [details] [associations]
symbol:PFL "POINTED FIRST LEAVES" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0006413 "translational initiation" evidence=TAS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005618 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005730 GO:GO:0006413 GO:GO:0042254 GO:GO:0003735
GO:GO:0019843 EMBL:AL161515 EMBL:AL049482 GO:GO:0022627
SUPFAM:SSF46946 EMBL:AC003979 EMBL:Y12227 EMBL:AC015446
EMBL:AC079286 eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877
KO:K02964 EMBL:Z23165 EMBL:Z28701 EMBL:Z28702 EMBL:Z28962
EMBL:AF411781 EMBL:AF386941 EMBL:AF370463 EMBL:AY034965
EMBL:AY064680 EMBL:AY070029 EMBL:AY086334 EMBL:AY086800
EMBL:BT006539 EMBL:AY087428 IPI:IPI00532609 PIR:S46223
RefSeq:NP_173692.1 RefSeq:NP_192718.1 RefSeq:NP_564434.1
UniGene:At.179 UniGene:At.180 UniGene:At.20392 UniGene:At.33672
ProteinModelPortal:P34788 SMR:P34788 IntAct:P34788 STRING:P34788
PaxDb:P34788 PRIDE:P34788 EnsemblPlants:AT1G22780.1
EnsemblPlants:AT1G34030.1 EnsemblPlants:AT4G09800.1 GeneID:826569
GeneID:838884 GeneID:840300 KEGG:ath:AT1G22780 KEGG:ath:AT1G34030
KEGG:ath:AT4G09800 GeneFarm:799 GeneFarm:800 GeneFarm:802
TAIR:At1g22780 TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788
OMA:IKYIVRI PhylomeDB:P34788 ProtClustDB:CLSN2681852
Genevestigator:P34788 GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 99 (39.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+++D+ERL I+ +RG+RH GL RGQ T T R +GK V + K+
Sbjct: 107 LRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGR--RGKTVGVSKKR 152
Score = 71 (30.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LRV NT + +++ +L + GIGR A+ I+C D+++ NK EL+ E+++L
Sbjct: 13 LRVLNTNVDGKQKIMFALTSIKGIGRRLAN-IVCKKADVDM-NKRAGELSAAEIDNL 67
>TAIR|locus:2009066 [details] [associations]
symbol:AT1G34030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005774
GO:GO:0005618 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0006413 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AL161515 EMBL:AL049482 GO:GO:0022627 SUPFAM:SSF46946
EMBL:AC003979 EMBL:Y12227 EMBL:AC015446 EMBL:AC079286
eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
EMBL:Z23165 EMBL:Z28701 EMBL:Z28702 EMBL:Z28962 EMBL:AF411781
EMBL:AF386941 EMBL:AF370463 EMBL:AY034965 EMBL:AY064680
EMBL:AY070029 EMBL:AY086334 EMBL:AY086800 EMBL:BT006539
EMBL:AY087428 IPI:IPI00532609 PIR:S46223 RefSeq:NP_173692.1
RefSeq:NP_192718.1 RefSeq:NP_564434.1 UniGene:At.179 UniGene:At.180
UniGene:At.20392 UniGene:At.33672 ProteinModelPortal:P34788
SMR:P34788 IntAct:P34788 STRING:P34788 PaxDb:P34788 PRIDE:P34788
EnsemblPlants:AT1G22780.1 EnsemblPlants:AT1G34030.1
EnsemblPlants:AT4G09800.1 GeneID:826569 GeneID:838884 GeneID:840300
KEGG:ath:AT1G22780 KEGG:ath:AT1G34030 KEGG:ath:AT4G09800
GeneFarm:799 GeneFarm:800 GeneFarm:802 TAIR:At1g22780
TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788 OMA:IKYIVRI
PhylomeDB:P34788 ProtClustDB:CLSN2681852 Genevestigator:P34788
GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 99 (39.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+++D+ERL I+ +RG+RH GL RGQ T T R +GK V + K+
Sbjct: 107 LRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGR--RGKTVGVSKKR 152
Score = 71 (30.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LRV NT + +++ +L + GIGR A+ I+C D+++ NK EL+ E+++L
Sbjct: 13 LRVLNTNVDGKQKIMFALTSIKGIGRRLAN-IVCKKADVDM-NKRAGELSAAEIDNL 67
>TAIR|locus:2005541 [details] [associations]
symbol:RPS18C "S18 ribosomal protein" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0015935 "small ribosomal subunit"
evidence=ISS;TAS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0009506 GO:GO:0005774 GO:GO:0005618
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0006413
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 EMBL:AL161515
EMBL:AL049482 GO:GO:0022627 SUPFAM:SSF46946 EMBL:AC003979
EMBL:Y12227 EMBL:AC015446 EMBL:AC079286 eggNOG:COG0099
PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964 EMBL:Z23165
EMBL:Z28701 EMBL:Z28702 EMBL:Z28962 EMBL:AF411781 EMBL:AF386941
EMBL:AF370463 EMBL:AY034965 EMBL:AY064680 EMBL:AY070029
EMBL:AY086334 EMBL:AY086800 EMBL:BT006539 EMBL:AY087428
IPI:IPI00532609 PIR:S46223 RefSeq:NP_173692.1 RefSeq:NP_192718.1
RefSeq:NP_564434.1 UniGene:At.179 UniGene:At.180 UniGene:At.20392
UniGene:At.33672 ProteinModelPortal:P34788 SMR:P34788 IntAct:P34788
STRING:P34788 PaxDb:P34788 PRIDE:P34788 EnsemblPlants:AT1G22780.1
EnsemblPlants:AT1G34030.1 EnsemblPlants:AT4G09800.1 GeneID:826569
GeneID:838884 GeneID:840300 KEGG:ath:AT1G22780 KEGG:ath:AT1G34030
KEGG:ath:AT4G09800 GeneFarm:799 GeneFarm:800 GeneFarm:802
TAIR:At1g22780 TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788
OMA:IKYIVRI PhylomeDB:P34788 ProtClustDB:CLSN2681852
Genevestigator:P34788 GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 99 (39.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+++D+ERL I+ +RG+RH GL RGQ T T R +GK V + K+
Sbjct: 107 LRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGR--RGKTVGVSKKR 152
Score = 71 (30.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LRV NT + +++ +L + GIGR A+ I+C D+++ NK EL+ E+++L
Sbjct: 13 LRVLNTNVDGKQKIMFALTSIKGIGRRLAN-IVCKKADVDM-NKRAGELSAAEIDNL 67
>UNIPROTKB|Q90YQ5 [details] [associations]
symbol:rps18 "40S ribosomal protein S18" species:7998
"Ictalurus punctatus" [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022627 SUPFAM:SSF46946 HAMAP:MF_01315 PANTHER:PTHR10871
HOVERGEN:HBG000200 EMBL:AF402827 RefSeq:NP_001187081.1
UniGene:Ipu.133 ProteinModelPortal:Q90YQ5 SMR:Q90YQ5 PRIDE:Q90YQ5
GeneID:100304570 Uniprot:Q90YQ5
Length = 152
Score = 101 (40.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 152
Score = 67 (28.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQIL--CDLNIGNKLTKELTGVEL 82
LRV NT I +++ ++ + G+GR AH +L D+++ +K ELT E+
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDL-SKRAGELTEDEV 64
>ASPGD|ASPL0000076821 [details] [associations]
symbol:AN4468 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0042173 "regulation of
sporulation resulting in formation of a cellular spore"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:BN001303 SUPFAM:SSF46946 PANTHER:PTHR10871
OMA:RSATTLF EnsemblFungi:CADANIAT00005983 Uniprot:C8V8H2
Length = 119
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/96 (34%), Positives = 51/96 (53%)
Query: 40 PNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVSRYLTGEDL 98
P + ++ SLQ +G+G + +I+ +I EL ++ L +S DL
Sbjct: 10 PEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVLSEMKIENDL 69
Query: 99 RRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTN 134
RR + +D++RL + YRG RH+ GLP RGQRT N
Sbjct: 70 RRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNN 105
>CGD|CAL0002110 [details] [associations]
symbol:orf19.6406 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0042173 "regulation
of sporulation resulting in formation of a cellular spore"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 CGD:CAL0002110 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000073 EMBL:AACQ01000072
SUPFAM:SSF46946 eggNOG:COG0099 KO:K02952 PANTHER:PTHR10871
RefSeq:XP_716162.1 RefSeq:XP_716245.1 ProteinModelPortal:Q5A357
STRING:Q5A357 GeneID:3642115 GeneID:3642169 KEGG:cal:CaO19.13764
KEGG:cal:CaO19.6406 Uniprot:Q5A357
Length = 122
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 52 VYGIGRSRAHQILCDLNI-GNKLTKELTGVELNSLREEVSRYLTGEDLRRCIKNDVERLV 110
++GIG A +++ + I N +LT ++ L +E+S+ L L+ I ND++
Sbjct: 24 IFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQLLVEGHLKHKINNDIKMKR 83
Query: 111 DIQCYRGIRHSQGLPCRGQRTSTNARTRK 139
I Y G RH+ G P RGQRT TN T +
Sbjct: 84 TIGSYAGSRHALGFPVRGQRTKTNGSTAR 112
>UNIPROTKB|Q8H588 [details] [associations]
symbol:OJ1656_E11.108 "Putative ribosomal protein S18"
species:39947 "Oryza sativa Japonica Group" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 EMBL:CM000144 GO:GO:0022627
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 EMBL:AP003843
EMBL:AP004670 STRING:Q8H588 Uniprot:Q8H588
Length = 148
Score = 99 (39.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+++D+ERL I+ +RG+RH GL RGQ T T R +GK V + K+
Sbjct: 103 LRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGR--RGKTVGVSKKR 148
Score = 67 (28.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSLREE 88
LR+ NT + +++ +L + GIGR R I C D+++ NK ELT EL L
Sbjct: 9 LRLLNTNVDGKQKIMFALTSIKGIGR-RFSNIACKKADIDM-NKRAGELTPEELERLMTV 66
Query: 89 VS 90
V+
Sbjct: 67 VA 68
>UNIPROTKB|G4MNZ8 [details] [associations]
symbol:MGG_05661 "40S ribosomal protein S18" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 SUPFAM:SSF46946
PANTHER:PTHR10871 KO:K02964 RefSeq:XP_003710559.1
ProteinModelPortal:G4MNZ8 SMR:G4MNZ8 EnsemblFungi:MGG_05661T0
GeneID:2676017 KEGG:mgr:MGG_05661 Uniprot:G4MNZ8
Length = 156
Score = 102 (41.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+++D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 109 LRDDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGR--RGRTVGVSKKK 154
Score = 62 (26.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQIL--CDLNIGNKLTKELTGVEL 82
LR+ NT + +++ +L + G+GR ++ ++ D+++ NK ELT EL
Sbjct: 15 LRLLNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDL-NKRAGELTSEEL 66
>UNIPROTKB|Q7RXX0 [details] [associations]
symbol:NCU00475 "40S ribosomal protein S18" species:367110
"Neurospora crassa OR74A" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935
eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
OrthoDB:EOG437VQ7 EMBL:AABX02000001 RefSeq:XP_956794.2
UniGene:Ncr.4507 ProteinModelPortal:Q7RXX0 SMR:Q7RXX0 STRING:Q7RXX0
EnsemblFungi:EFNCRT00000000145 GeneID:3872941 KEGG:ncr:NCU00475
Uniprot:Q7RXX0
Length = 156
Score = 102 (41.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+++D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 109 LRDDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGR--RGRTVGVSKKK 154
Score = 62 (26.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LR+ NT + +++ SL + G+GR R ++C D+++ +K ELT EL +
Sbjct: 15 LRLLNTNVDGKQKVVYSLTKIKGVGR-RYSNLVCKKADVDL-SKRAGELTSEELERI 69
>DICTYBASE|DDB_G0276415 [details] [associations]
symbol:rps18 "40S ribosomal protein S18"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS;IBA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS;IBA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 dictyBase:DDB_G0276415 GO:GO:0005829 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AAFI02000015 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI KO:K02964
RefSeq:XP_643120.1 ProteinModelPortal:Q869U7 SMR:Q869U7
STRING:Q869U7 PRIDE:Q869U7 EnsemblProtists:DDB0231058
GeneID:8620525 KEGG:ddi:DDB_G0276415 ProtClustDB:PTZ00134
Uniprot:Q869U7
Length = 154
Score = 104 (41.7 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 103 KNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+ D+ERL I+ +RG+RH GL RGQ+T T R +G+ V + G++
Sbjct: 110 REDLERLKKIRAHRGVRHHFGLRVRGQKTKTTGR--RGRTVGVAGRR 154
Score = 56 (24.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 21 TISFHGLRVQGLRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGV 80
++ F G +R+ NT + ++++ +L V G+GR A+ + +I T + G
Sbjct: 4 SLVFQGEFQHIIRIYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADID---TSKRAG- 59
Query: 81 ELNSLREEVSRYLT 94
EL+ ++EV R T
Sbjct: 60 ELS--KDEVERLTT 71
>RGD|2318487 [details] [associations]
symbol:LOC100362298 "ribosomal protein S18-like" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 RGD:2318487 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OMA:IKYIVRI OrthoDB:EOG4KSPM2
IPI:IPI00387914 RefSeq:XP_002729551.1 Ensembl:ENSRNOT00000048495
GeneID:100362298 KEGG:rno:100362298 UCSC:RGD:2318487 Uniprot:D3ZM33
Length = 152
Score = 98 (39.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G V + KK
Sbjct: 107 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGHTVGVSKKK 152
Score = 69 (29.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV NT I +++ ++ + G+GR AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
>UNIPROTKB|Q8H590 [details] [associations]
symbol:OJ1656_E11.104 "Putative ribosomal protein S18A"
species:39947 "Oryza sativa Japonica Group" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
EMBL:DP000009 EMBL:AP008209 GO:GO:0003723 GO:GO:0003735
EMBL:AP008213 EMBL:CM000144 GO:GO:0022627 SUPFAM:SSF46946
GO:GO:0015935 PANTHER:PTHR10871 KO:K02964 OMA:IKYIVRI
ProtClustDB:CLSN2681852 EMBL:AP003843 EMBL:AP004670 EMBL:AC090871
EMBL:AC092076 EMBL:AK058881 EMBL:AK059548 RefSeq:NP_001051541.1
RefSeq:NP_001059007.2 UniGene:Os.13842 UniGene:Os.88187
STRING:Q8H590 EnsemblPlants:LOC_Os03g58050.1
EnsemblPlants:LOC_Os07g07709.1 GeneID:4334407 GeneID:4342526
KEGG:osa:4334407 KEGG:osa:4342526 Uniprot:Q8H590
Length = 152
Score = 99 (39.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+++D+ERL I+ +RG+RH GL RGQ T T R +GK V + K+
Sbjct: 107 LRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGR--RGKTVGVSKKR 152
Score = 66 (28.3 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSLREE 88
LR+ NT + +++ +L + G+GR R I C D+++ NK ELT EL L
Sbjct: 13 LRLLNTNVDGKQKIMFALTSIKGVGR-RFSNIACKKADIDM-NKRAGELTPEELERLMTV 70
Query: 89 VS 90
V+
Sbjct: 71 VA 72
>UNIPROTKB|Q7S2C2 [details] [associations]
symbol:NCU09539 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005739 "mitochondrion"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005739 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
KO:K02952 PANTHER:PTHR10871 HOGENOM:HOG000039878 OrthoDB:EOG4WHCWG
OMA:MTIEGDA EMBL:AABX02000041 RefSeq:XP_958758.1
ProteinModelPortal:Q7S2C2 STRING:Q7S2C2
EnsemblFungi:EFNCRT00000007552 GeneID:3874905 KEGG:ncr:NCU09539
Uniprot:Q7S2C2
Length = 119
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 33/103 (32%), Positives = 56/103 (54%)
Query: 43 KRLETSLQHVYGIGRSRAHQILCDLNIGNKLTK-ELTGVELNSLREEVSRYLTGEDLRRC 101
K ++ +L+ YG+G+ + +IL +I + L + +L E+S D RR
Sbjct: 13 KLVQKALESFYGLGQQASARILAKYSIHPRAKMGTLPPKIVTALTAELSTMTIENDARRL 72
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTN-ARTRKGKRV 143
+ ++++RL D+ YRG RH+ GLP RGQ+T A RK ++
Sbjct: 73 VLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNKI 115
>POMBASE|SPBC16D10.11c [details] [associations]
symbol:rps1801 "40S ribosomal protein S18 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=ISO] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
PomBase:SPBC16D10.11c PomBase:SPCC1259.01c GO:GO:0005739
GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 PIR:T39575 RefSeq:NP_588057.2 RefSeq:NP_596506.1
ProteinModelPortal:O94754 SMR:O94754 IntAct:O94754 STRING:O94754
PRIDE:O94754 EnsemblFungi:SPBC16D10.11c.1
EnsemblFungi:SPCC1259.01c.1 GeneID:2540180 GeneID:3361064
KEGG:spo:SPBC16D10.11c KEGG:spo:SPCC1259.01c OrthoDB:EOG437VQ7
NextBio:20801312 Uniprot:O94754
Length = 152
Score = 103 (41.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL IQ +RG+RH+ L RGQ T T R +GK V + KK
Sbjct: 107 LREDLERLKKIQTHRGLRHALDLRVRGQHTKTTGR--RGKTVGVSKKK 152
Score = 55 (24.4 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LR+ NT + ++ ++ + G+GR A+ I+C D+++ +K ELT EL +
Sbjct: 13 LRLLNTNVDGKVKVMFAMTQIKGVGRRYAN-IVCKKADIDM-SKRAGELTTEELERI 67
>POMBASE|SPCC1259.01c [details] [associations]
symbol:rps1802 "40S ribosomal protein S18 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=ISM] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 PomBase:SPBC16D10.11c PomBase:SPCC1259.01c
GO:GO:0005739 GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0022627 SUPFAM:SSF46946
eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 PIR:T39575 RefSeq:NP_588057.2
RefSeq:NP_596506.1 ProteinModelPortal:O94754 SMR:O94754
IntAct:O94754 STRING:O94754 PRIDE:O94754
EnsemblFungi:SPBC16D10.11c.1 EnsemblFungi:SPCC1259.01c.1
GeneID:2540180 GeneID:3361064 KEGG:spo:SPBC16D10.11c
KEGG:spo:SPCC1259.01c OrthoDB:EOG437VQ7 NextBio:20801312
Uniprot:O94754
Length = 152
Score = 103 (41.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL IQ +RG+RH+ L RGQ T T R +GK V + KK
Sbjct: 107 LREDLERLKKIQTHRGLRHALDLRVRGQHTKTTGR--RGKTVGVSKKK 152
Score = 55 (24.4 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LR+ NT + ++ ++ + G+GR A+ I+C D+++ +K ELT EL +
Sbjct: 13 LRLLNTNVDGKVKVMFAMTQIKGVGRRYAN-IVCKKADIDM-SKRAGELTTEELERI 67
>UNIPROTKB|Q5B4R2 [details] [associations]
symbol:AN4468.2 "Putative uncharacterized protein"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005739
"mitochondrion" evidence=IBA] [GO:0006412 "translation"
evidence=IBA] [GO:0015935 "small ribosomal subunit" evidence=IBA]
[GO:0042254 "ribosome biogenesis" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005739 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 EMBL:AACD01000077 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 PANTHER:PTHR10871
HOGENOM:HOG000039878 OrthoDB:EOG4WHCWG RefSeq:XP_662072.1
ProteinModelPortal:Q5B4R2 STRING:Q5B4R2 GeneID:2872269
KEGG:ani:AN4468.2 Uniprot:Q5B4R2
Length = 130
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 32/88 (36%), Positives = 47/88 (53%)
Query: 48 SLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEVSRYLTGEDLRRCIKNDV 106
SLQ +G+G + +I+ +I EL ++ L +S DLRR + +D+
Sbjct: 16 SLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVLSEMKIENDLRRQVLDDI 75
Query: 107 ERLVDIQCYRGIRHSQGLPCRGQRTSTN 134
+RL + YRG RH+ GLP RGQRT N
Sbjct: 76 KRLKETGTYRGRRHALGLPVRGQRTRNN 103
>ASPGD|ASPL0000026438 [details] [associations]
symbol:AN5441 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006407 "rRNA export from
nucleus" evidence=IEA] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 EMBL:BN001305 GO:GO:0003735 EMBL:AACD01000094
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7
RefSeq:XP_663045.1 ProteinModelPortal:Q5B1Y9 SMR:Q5B1Y9
STRING:Q5B1Y9 EnsemblFungi:CADANIAT00003648 GeneID:2871718
KEGG:ani:AN5441.2 Uniprot:Q5B1Y9
Length = 155
Score = 98 (39.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 103 KNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 110 REDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGR--RGRTVGVSKKK 154
Score = 65 (27.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LR+ NT + +++ +L V G+GR R ++C D+++ NK ELT EL +
Sbjct: 15 LRLLNTNVDGKEKIMYALTQVKGVGR-RYSNLVCKKADVDL-NKRAGELTTEELERI 69
>UNIPROTKB|Q5B1Y9 [details] [associations]
symbol:AN5441.2 "Ribosomal protein S13p/S18e
(AFU_orthologue; AFUA_6G13550)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
EMBL:BN001305 GO:GO:0003735 EMBL:AACD01000094 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7 RefSeq:XP_663045.1
ProteinModelPortal:Q5B1Y9 SMR:Q5B1Y9 STRING:Q5B1Y9
EnsemblFungi:CADANIAT00003648 GeneID:2871718 KEGG:ani:AN5441.2
Uniprot:Q5B1Y9
Length = 155
Score = 98 (39.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 103 KNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 110 REDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGR--RGRTVGVSKKK 154
Score = 65 (27.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LR+ NT + +++ +L V G+GR R ++C D+++ NK ELT EL +
Sbjct: 15 LRLLNTNVDGKEKIMYALTQVKGVGR-RYSNLVCKKADVDL-NKRAGELTTEELERI 69
>WB|WBGene00004487 [details] [associations]
symbol:rps-18 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006898 GO:GO:0006412
EMBL:Z99281 GO:GO:0000003 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 PIR:T27228 RefSeq:NP_502794.1
ProteinModelPortal:O18240 SMR:O18240 DIP:DIP-25985N
MINT:MINT-1089736 STRING:O18240 PaxDb:O18240
EnsemblMetazoa:Y57G11C.16.1 EnsemblMetazoa:Y57G11C.16.2
GeneID:178408 KEGG:cel:CELE_Y57G11C.16 UCSC:Y57G11C.16.1 CTD:178408
WormBase:Y57G11C.16 InParanoid:O18240 NextBio:901012 Uniprot:O18240
Length = 154
Score = 101 (40.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ER+ I+ +RG+RH GL RGQ T T R KG+ V + KK
Sbjct: 107 LREDLERMKKIRLHRGLRHYWGLRVRGQHTKTTGR--KGRTVGVSKKK 152
Score = 58 (25.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
RV NT I ++++ +L + G+GR A + C D+++ NK ELT + + +
Sbjct: 14 RVMNTNIDGNRKVPYALTAIKGVGRRFAF-VCCRKADVDV-NKRAGELTEEDFDKI 67
>UNIPROTKB|O18240 [details] [associations]
symbol:rps-18 "Protein RPS-18" species:6239 "Caenorhabditis
elegans" [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006898 GO:GO:0006412 EMBL:Z99281 GO:GO:0000003
GO:GO:0042254 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 GeneTree:ENSGT00390000012691
PIR:T27228 RefSeq:NP_502794.1 ProteinModelPortal:O18240 SMR:O18240
DIP:DIP-25985N MINT:MINT-1089736 STRING:O18240 PaxDb:O18240
EnsemblMetazoa:Y57G11C.16.1 EnsemblMetazoa:Y57G11C.16.2
GeneID:178408 KEGG:cel:CELE_Y57G11C.16 UCSC:Y57G11C.16.1 CTD:178408
WormBase:Y57G11C.16 InParanoid:O18240 NextBio:901012 Uniprot:O18240
Length = 154
Score = 101 (40.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ER+ I+ +RG+RH GL RGQ T T R KG+ V + KK
Sbjct: 107 LREDLERMKKIRLHRGLRHYWGLRVRGQHTKTTGR--KGRTVGVSKKK 152
Score = 58 (25.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 33 RVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
RV NT I ++++ +L + G+GR A + C D+++ NK ELT + + +
Sbjct: 14 RVMNTNIDGNRKVPYALTAIKGVGRRFAF-VCCRKADVDV-NKRAGELTEEDFDKI 67
>UNIPROTKB|Q755U6 [details] [associations]
symbol:AER422C "AER422Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005739 "mitochondrion" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005829 "cytosol" evidence=IBA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005739
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
EMBL:AE016818 GenomeReviews:AE016818_GR SUPFAM:SSF46946
GO:GO:0015935 KO:K02952 PANTHER:PTHR10871 HOGENOM:HOG000039878
OrthoDB:EOG4WHCWG OMA:MTIEGDA RefSeq:NP_985277.1
ProteinModelPortal:Q755U6 STRING:Q755U6 EnsemblFungi:AAS53101
GeneID:4621496 KEGG:ago:AGOS_AER422C PhylomeDB:Q755U6
Uniprot:Q755U6
Length = 144
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 53 YGIGRSRAHQILCDLNIGNKLTKE-LTGVELNSLREEVSRYLTGEDLRRCIKNDVERLVD 111
YGIG + ++ L + + + LT ++ ++ E+S+ +D R +K ++
Sbjct: 25 YGIGLKTSERLCAKLGLYPWMRMQSLTEPQIMAMSTELSKMTIEDDARAIVKENIALKRR 84
Query: 112 IQCYRGIRHSQGLPCRGQRTSTNART-RKGKRV 143
I Y G+RH+ GLP GQRT TNA+T RK R+
Sbjct: 85 IGSYAGLRHAMGLPVNGQRTRTNAKTARKLNRL 117
>UNIPROTKB|Q756F0 [details] [associations]
symbol:AER315C "AER315Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 EMBL:AE016818 GenomeReviews:AE016818_GR
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7 RefSeq:NP_985171.1
ProteinModelPortal:Q756F0 SMR:Q756F0 STRING:Q756F0
EnsemblFungi:AAS52995 GeneID:4621384 KEGG:ago:AGOS_AER315C
PhylomeDB:Q756F0 Uniprot:Q756F0
Length = 146
Score = 97 (39.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 97 DLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTR 138
+L +++D+ERL I+ +RGIRH GL RGQ T T R R
Sbjct: 104 NLESKLRDDLERLKKIRAHRGIRHFWGLRVRGQHTKTTGRRR 145
Score = 60 (26.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVEL 82
LR+ NT + + ++ +L + G+GR A+ ++C D+++ NK ELT EL
Sbjct: 15 LRLLNTNVDGNIKIVYALTTIRGVGRRYAN-LICKKADVDL-NKRAGELTQEEL 66
>SGD|S000002858 [details] [associations]
symbol:RPS18A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=NAS;IBA] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0006407 "rRNA export from nucleus" evidence=IGI]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;NAS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 SGD:S000002858 EMBL:U33007 GO:GO:0005739
EMBL:BK006938 GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0000447 PDB:1S1H PDBsum:1S1H GO:GO:0022627 SUPFAM:SSF46946
PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB
PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C PDBsum:3U5G GO:GO:0006407
HAMAP:MF_01315 PANTHER:PTHR10871 PDB:1K5X PDBsum:1K5X PIR:S50886
RefSeq:NP_010738.1 RefSeq:NP_013686.1 ProteinModelPortal:P0CX55
SMR:P0CX55 EnsemblFungi:YDR450W EnsemblFungi:YML026C GeneID:852061
GeneID:854982 KEGG:sce:YDR450W KEGG:sce:YML026C KO:K02964
EvolutionaryTrace:P0CX55 NextBio:970337 ArrayExpress:P0CX55
GermOnline:YDR450W Uniprot:P0CX55
Length = 146
Score = 97 (39.2 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 83 NSLREEVSRYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTR 138
N + + + ++ +++D+ERL I+ +RGIRH GL RGQ T T R R
Sbjct: 90 NDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRGQHTKTTGRRR 145
Score = 55 (24.4 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LR+ NT + + ++ +L + G+GR R ++C D+++ +K ELT EL +
Sbjct: 15 LRLLNTNVDGNIKIVYALTTIKGVGR-RYSNLVCKKADVDL-HKRAGELTQEELERI 69
>SGD|S000004488 [details] [associations]
symbol:RPS18B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0006407 "rRNA
export from nucleus" evidence=IGI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;NAS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IBA;NAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 SGD:S000004488
GO:GO:0005739 EMBL:BK006946 GO:GO:0003735 GO:GO:0002181 EMBL:Z46659
GO:GO:0019843 GO:GO:0000447 GO:GO:0022627 SUPFAM:SSF46946
GO:GO:0006407 HAMAP:MF_01315 PANTHER:PTHR10871 PIR:S50886
RefSeq:NP_010738.1 RefSeq:NP_013686.1 EnsemblFungi:YDR450W
EnsemblFungi:YML026C GeneID:852061 GeneID:854982 KEGG:sce:YDR450W
KEGG:sce:YML026C KO:K02964 NextBio:970337 EMBL:X62392
ProteinModelPortal:P0CX56 SMR:P0CX56 GeneTree:ENSGT00390000012691
ArrayExpress:P0CX56 GermOnline:YML026C Uniprot:P0CX56
Length = 146
Score = 97 (39.2 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 83 NSLREEVSRYLTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTR 138
N + + + ++ +++D+ERL I+ +RGIRH GL RGQ T T R R
Sbjct: 90 NDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRGQHTKTTGRRR 145
Score = 55 (24.4 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILC---DLNIGNKLTKELTGVELNSL 85
LR+ NT + + ++ +L + G+GR R ++C D+++ +K ELT EL +
Sbjct: 15 LRLLNTNVDGNIKIVYALTTIKGVGR-RYSNLVCKKADVDL-HKRAGELTQEELERI 69
>RGD|1561919 [details] [associations]
symbol:RGD1561919 "similar to ribosomal protein S18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 RGD:1561919 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OrthoDB:EOG4KSPM2 IPI:IPI00197271
RefSeq:XP_226269.1 Ensembl:ENSRNOT00000047417 GeneID:307665
KEGG:rno:307665 UCSC:RGD:1561919 CTD:307665 NextBio:657735
Uniprot:D3ZAU6
Length = 152
Score = 94 (38.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ER+ I+ +RG+RH GL RG+ T T R +G+ V + KK
Sbjct: 107 LREDLERVKKIRAHRGLRHFWGLRVRGRHTKTTGR--RGRTVGVSKKK 152
Score = 58 (25.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV +T + +++ ++ + G+G AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLDTNVDGQRKIALAITAIKGVGWRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
>SGD|S000005025 [details] [associations]
symbol:SWS2 "Putative mitochondrial ribosomal protein of the
small subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISA] [GO:0042173
"regulation of sporulation resulting in formation of a cellular
spore" evidence=IMP] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0032543 "mitochondrial
translation" evidence=ISA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 SGD:S000005025 EMBL:BK006947 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 GO:GO:0032543 EMBL:DQ115393 EMBL:X86470
GO:GO:0005763 SUPFAM:SSF46946 GO:GO:0042173 RefSeq:NP_014325.3
GeneID:855650 KEGG:sce:YNL074C EMBL:Z71357 eggNOG:COG0099 KO:K02952
HAMAP:MF_01315 PANTHER:PTHR10871 HOGENOM:HOG000039878
OrthoDB:EOG4WHCWG PIR:S53897 RefSeq:NP_014318.3
ProteinModelPortal:P53937 SMR:P53937 DIP:DIP-5522N IntAct:P53937
MINT:MINT-539439 STRING:P53937 PaxDb:P53937 EnsemblFungi:YNL081C
GeneID:855643 KEGG:sce:YNL081C CYGD:YNL081c OMA:MTIEGDA
NextBio:979875 Genevestigator:P53937 GermOnline:YNL081C
Uniprot:P53937
Length = 143
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 53 YGIGRSRAHQILCDLNIGNKLTK-ELTGVELNSLREEVSRYLTGEDLRRCIKNDVERLVD 111
YGIG++ A +I L + +L+ ++ S+ E+S D R +K+++
Sbjct: 25 YGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASELSTMTIEGDARAIVKDNIALKRK 84
Query: 112 IQCYRGIRHSQGLPCRGQRTSTNART-RKGKRV 143
I Y G+RH+ LP RGQ T NA+T RK ++
Sbjct: 85 IGSYSGMRHTLHLPVRGQHTRNNAKTARKLNKI 117
>FB|FBgn0010411 [details] [associations]
symbol:RpS18 "Ribosomal protein S18" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IBA;NAS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;NAS] [GO:0006412 "translation"
evidence=ISS;IBA;NAS] [GO:0006413 "translational initiation"
evidence=NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:AE013599 GO:GO:0005829 GO:GO:0005811 GO:GO:0006412
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 GO:GO:0000022
ChiTaRS:RPS18 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 EMBL:L22959 EMBL:AY118434
EMBL:BT024929 RefSeq:NP_476964.1 RefSeq:NP_725943.1
UniGene:Dm.20558 ProteinModelPortal:P41094 SMR:P41094
DIP:DIP-21027N STRING:P41094 PaxDb:P41094 PRIDE:P41094
EnsemblMetazoa:FBtr0086273 EnsemblMetazoa:FBtr0086274 GeneID:37292
KEGG:dme:Dmel_CG8900 FlyBase:FBgn0010411 InParanoid:P41094
OrthoDB:EOG49GJ00 PhylomeDB:P41094 GenomeRNAi:37292 NextBio:802956
Bgee:P41094 GermOnline:CG8900 Uniprot:P41094
Length = 152
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 69 IGNKLTKELTGVELNSLREEVS-RY--LTGEDLRRCIKNDVERLVDIQCYRGIRHSQGLP 125
I N L ++ LN ++ + +Y LT +L +++D+ERL I+ +RG+RH GL
Sbjct: 71 ISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLR 130
Query: 126 CRGQRTSTNARTRKGKRVAIPGKK 149
RGQ T T R +G+ V + KK
Sbjct: 131 VRGQHTKTTGR--RGRTVGVSKKK 152
>UNIPROTKB|F1S4M2 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 EMBL:CU655822
Ensembl:ENSSSCT00000009592 OMA:ATTAIKG Uniprot:F1S4M2
Length = 152
Score = 85 (35.0 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGK 148
+ DVERL I+ +RG+RH GL GQ T T R +G V + K
Sbjct: 107 LHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGR--RGHTVRVSKK 151
Score = 59 (25.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQIL--CDLNIGNKLTKELTGVEL 82
LRV NT I +++ + + G+GR AH +L D+++ K ELT E+
Sbjct: 13 LRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDL-TKRAGELTEDEV 64
>UNIPROTKB|J3JS69 [details] [associations]
symbol:RPS18 "HCG1777176, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:CH471081 GO:GO:0006412 EMBL:CH471052 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 GO:GO:0005581 EMBL:AL031228
EMBL:AL645940 EMBL:AL844527 EMBL:AL662827 EMBL:AL662820
EMBL:CR759817 EMBL:AL713971 SUPFAM:SSF46946 PANTHER:PTHR10871
UniGene:Hs.448854 UniGene:Hs.627414 HGNC:HGNC:10401
Ensembl:ENST00000474973 Ensembl:ENST00000476288
Ensembl:ENST00000477055 Ensembl:ENST00000484321
Ensembl:ENST00000486781 Ensembl:ENST00000494232 Uniprot:J3JS69
Length = 82
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I+ +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 37 LREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR--RGRTVGVSKKK 82
>UNIPROTKB|A8J3J1 [details] [associations]
symbol:MRPS13 "Mitochondrial ribosomal protein S13"
species:3055 "Chlamydomonas reinhardtii" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005739 "mitochondrion"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 GO:GO:0005739 GO:GO:0006412
GO:GO:0042254 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871 EMBL:DS496135
RefSeq:XP_001695933.1 UniGene:Cre.15766 ProteinModelPortal:A8J3J1
STRING:A8J3J1 EnsemblPlants:EDP01270 GeneID:5721441
KEGG:cre:CHLREDRAFT_191536 Uniprot:A8J3J1
Length = 124
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 48 SLQHVYGIGRSRAHQILCDLNIGNKL-TKELTGVELNSLREEV-SRYLTGEDLRRCIKND 105
+L V+G+G+S + + I L K++ + + + + ++TG+ L+R ++ +
Sbjct: 18 ALARVFGLGKSTSLAVSEACGISKDLKVKDVKDSYIQKVTAYIEANFVTGDTLKRQVREN 77
Query: 106 VERLVDIQCYRGIRHSQGLPCRGQRTSTNA-RTRK 139
V V I RG+RH+ GLP +T +N RK
Sbjct: 78 VLEEVAINSRRGVRHTLGLPVSSAQTRSNGVNARK 112
>UNIPROTKB|Q9GT46 [details] [associations]
symbol:IrpS18 "Ribosomal protein S18" species:7165
"Anopheles gambiae" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
PANTHER:PTHR10871 EMBL:AF283268 ProteinModelPortal:Q9GT46
STRING:Q9GT46 InParanoid:Q9GT46 ArrayExpress:Q9GT46 Uniprot:Q9GT46
Length = 46
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
++ D+ERL I +RG+RH GL RGQ T T R +G+ V + KK
Sbjct: 1 LREDLERLKRIHAHRGMRHYWGLRVRGQHTKTTGR--RGRTVGVSKKK 46
>RGD|1562404 [details] [associations]
symbol:RGD1562404 "similar to ribosomal protein S18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 RGD:1562404 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OrthoDB:EOG4KSPM2 IPI:IPI00214217
RefSeq:XP_001058023.1 RefSeq:XP_234780.1 PRIDE:D3ZII2
Ensembl:ENSRNOT00000051652 GeneID:314556 KEGG:rno:314556
UCSC:RGD:1562404 CTD:314556 OMA:HFWDLRV NextBio:667837
Uniprot:D3ZII2
Length = 152
Score = 77 (32.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 102 IKNDVERLVDIQCYRGIRHSQGLPCRGQRTSTNARTRKGKRVAIPGKK 149
+ D+ERL I+ +RG+RH L GQ + T R +G V + KK
Sbjct: 107 LHEDLERLKKIRAHRGLRHFWDLRVGGQHSKTTGR--RGHTVGVSKKK 152
Score = 64 (27.6 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 32 LRVGNTEIPNDKRLETSLQHVYGIGRSRAHQILCDLNIGNKLTKELTGVELNSLREEVSR 91
LRV NT I ++ ++ + G+GR AH +L +I LTK G EL +EV R
Sbjct: 13 LRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADID--LTKR-AG-ELTE--DEVER 66
Query: 92 YLT 94
+T
Sbjct: 67 VIT 69
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 153 153 0.00081 105 3 11 22 0.48 31
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 532 (57 KB)
Total size of DFA: 121 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.68u 0.10s 15.78t Elapsed: 00:00:01
Total cpu time: 15.68u 0.10s 15.78t Elapsed: 00:00:01
Start: Tue May 21 00:26:33 2013 End: Tue May 21 00:26:34 2013