Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>031770
MAKPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKS
LADQRERSMALNSEGLEGLVPRAKLLLTLGGTFFLGFWPLILVTVGFFSALYFYFGPTFV
HDASNSPMSPAQYGDPYALLEDERISQIAPHVN

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031770
        (153 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2031010 - symbol:AT1G50020 "AT1G50020" species...   414  9.9e-39   1


>TAIR|locus:2031010 [details] [associations]
            symbol:AT1G50020 "AT1G50020" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] EMBL:CP002684 GO:GO:0009535 EMBL:AC015445
            UniGene:At.47482 UniGene:At.71023 EMBL:AF334727 EMBL:AF360171
            IPI:IPI00518695 PIR:F96536 RefSeq:NP_175424.1 STRING:Q9LPM3
            PRIDE:Q9LPM3 EnsemblPlants:AT1G50020.1 GeneID:841426
            KEGG:ath:AT1G50020 TAIR:At1g50020 InParanoid:Q9LPM3 OMA:PPYIDPY
            PhylomeDB:Q9LPM3 ProtClustDB:CLSN2682701 ArrayExpress:Q9LPM3
            Genevestigator:Q9LPM3 Uniprot:Q9LPM3
        Length = 209

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 88/152 (57%), Positives = 106/152 (69%)

Query:     3 KPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTE-IDKSL 61
             +PPESLFMKELKRRGMTPTSLL+D    D    D+ K  +E  G S + T +T   DKSL
Sbjct:    63 EPPESLFMKELKRRGMTPTSLLQDYE-VDQ---DEIKTGKET-GNSSKTTATTPAFDKSL 117

Query:    62 ADQRERSMALNSEGLEGLVPRAKXXXXXXXXXXXXXWPLILVTVGFFSALYFYFGPTFVH 121
              +QRERS+ALNSEGLEGL+PRA+             WPLI++T+G FSALY YFG  F+H
Sbjct:   118 LNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIH 177

Query:   122 DASNSPMSPAQYGDPYALLEDERISQIAPHVN 153
             D S +P+SP  Y DPYALLEDERIS + P +N
Sbjct:   178 DGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.132   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       140   0.00091  102 3  11 23  0.48    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  532 (57 KB)
  Total size of DFA:  114 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.61u 0.11s 14.72t   Elapsed:  00:00:01
  Total cpu time:  14.61u 0.11s 14.72t   Elapsed:  00:00:01
  Start:  Thu May  9 23:19:33 2013   End:  Thu May  9 23:19:34 2013

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