BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031771
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1
Length = 209
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S LG G +FG+ +G + IGAT+GA AAFL+GR + + +V K+ +F+++ A+
Sbjct: 38 SILTLGAGVVFGVILGSIYVFIGATLGATAAFLVGRYLARGWVAKKIAGNQKFKAIDEAV 97
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
+ G KIV+L RL P+ PFN+LNY +T V L +Y++ S +GM+P T+ VY+G+
Sbjct: 98 GKEGLKIVILTRLSPVFPFNLLNYAYGITNVSLKDYVIGS-LGMIPGTIMYVYIGSLAGS 156
Query: 126 LSDVTHGWNEFSKT-RW 141
L+ + N+ + T +W
Sbjct: 157 LATLGTATNQANPTLQW 173
>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1
Length = 381
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 8 FQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR 67
+ GYL+G +G +G IG A ++ + + +V +++++ + +V ++
Sbjct: 182 LNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVVEG 241
Query: 68 -SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDL 126
SG K+V L RL P+ PF + N + S+T VPL Y++AS G++P L Y+GTTL+ +
Sbjct: 242 GSGLKVVALARLTPI-PFGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTTLRTM 300
Query: 127 SDV 129
DV
Sbjct: 301 EDV 303
>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2
Length = 380
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 8 FQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR 67
+ GYL+G +G +G IG A ++ + + +V ++++ + +V ++
Sbjct: 181 LNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVEG 240
Query: 68 -SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDL 126
SG K+V L RL P+ PF + N + S+T + L Y++AS +G++P L Y+GTTL+ +
Sbjct: 241 GSGLKVVALARLTPI-PFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRTM 299
Query: 127 SDV 129
DV
Sbjct: 300 EDV 302
>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli
(strain K12) GN=ydjX PE=3 SV=2
Length = 236
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%)
Query: 10 LGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSG 69
+ GG +FG +G + I AT+ + +FLL R +G+ ++ + F+++ I R+G
Sbjct: 70 IAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNG 129
Query: 70 FKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 111
++L RL+PL P+N+ NY +T + Y L S + +P
Sbjct: 130 IDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLP 171
>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana
GN=At4g09580 PE=1 SV=1
Length = 287
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
G LFG+ GFV + AT GA + F L + +G+P V + +F +A +R
Sbjct: 137 AGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEKLRFFQAEIAKRRDRLL 196
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
+L LR+ P LP +N + +P + LA+ +G+MP + V G L DL V
Sbjct: 197 NYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASYITVRAGLALGDLRSVK 256
Query: 131 HGWN 134
++
Sbjct: 257 DLYD 260
>sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1
Length = 418
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+F GY+FG+ G++ + +G+ A+F++ RTI FV ++ +F ++AL +
Sbjct: 143 STFGTVAGYIFGVWKGWLLYASATVLGSTASFIVSRTILSKFVHRLMERDKRFAALALTL 202
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLK 124
+ G K++ ++RL P LP+++ N +S P V L Y LA+ I + P L ++G L+
Sbjct: 203 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLTYGLATAI-ITPKLLVPAFIGNRLR 260
Query: 125 DLSD 128
LS+
Sbjct: 261 VLSE 264
>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 84/147 (57%), Gaps = 7/147 (4%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+F G++FG+ G++ + +G+ +F++ RTI FV ++ +F ++AL +
Sbjct: 142 STFGTIAGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTL 201
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
+ G K++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ +
Sbjct: 202 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRI 258
Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
+ LS+ + SK V++ S+IL+
Sbjct: 259 RILSEKNEEMSAGSKA--VNICSIILT 283
>sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 84/147 (57%), Gaps = 7/147 (4%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+F G+++G+ G++ + +G+ +F++ RTI FV ++ +F ++AL +
Sbjct: 142 STFGTISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTL 201
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
+ G K++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ +
Sbjct: 202 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRI 258
Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
+ LS+ + SK V++ S+IL+
Sbjct: 259 RILSEKNEEMSAASKA--VNICSIILT 283
>sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3
SV=1
Length = 418
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 84/147 (57%), Gaps = 7/147 (4%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+F G+++G+ G++ + +G+ +F++ RTI FV ++ +F ++AL +
Sbjct: 142 STFGTISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTL 201
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
+ G K++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G+ +
Sbjct: 202 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAL-ITPKLLVPAFIGSRI 258
Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
+ LS+ + SK V++ S+IL+
Sbjct: 259 RILSEKNEEMSAASKA--VNICSIILT 283
>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tvp38 PE=3 SV=1
Length = 419
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 84/147 (57%), Gaps = 7/147 (4%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+F G++FG+ G++ + +G+ +F++ RT+ FV ++ +F ++AL +
Sbjct: 143 STFGTVAGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRMMERDKRFAALALTL 202
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
+ G K++ ++RL P LP+++ N +S P PL+ Y LA+ I + P L ++G+ +
Sbjct: 203 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLM-YGLATAI-ITPKLLVPAFIGSRI 259
Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
+ LS+ + SK V++ S++L+
Sbjct: 260 RILSEQKGEMSAGSKA--VNICSIVLT 284
>sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2
Length = 414
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+F GY+FG+ G+ + +G+ +F++ RTI FV ++ +F ++AL +
Sbjct: 140 STFGTISGYIFGVWKGWFLYASATVLGSTCSFVVSRTILSKFVNRMMERDKRFAALALTL 199
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
+ G K++ ++RL P LP+++ N +S P PL+ Y LA+ I + P L +VG+ +
Sbjct: 200 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVQPLM-YGLATAI-VTPKLLVPAFVGSRI 256
Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
+ LS+ + SK V++ S+I++
Sbjct: 257 RLLSEKGEEMSAGSKA--VNIISIIVT 281
>sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2
Length = 415
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+F GY+FG+ G++ + +G+ +F++ RTI FV ++ +F +++L +
Sbjct: 142 STFGTMAGYIFGIWKGWLLYASATVLGSTCSFIVSRTILSKFVHRLMERDKRFAALSLTL 201
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPV--PLLEYMLASWIGMMPITLALVYVGTTL 123
+ G K++ ++RL P LP+++ N +S P PL+ Y LA+ + + P L ++G L
Sbjct: 202 KYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVQPLM-YGLATAL-ISPKLLVPAFIGNRL 258
Query: 124 KDLSDVTHGWNEFSK 138
+ LS+ + SK
Sbjct: 259 RVLSENNEEMSAGSK 273
>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum
GN=DDB_G0275543 PE=3 SV=2
Length = 334
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 10 LGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSG 69
L GG LFGL VGF AT+GA ++L+ IG+ V D + S +L+ +R
Sbjct: 183 LSGG-LFGLKVGFPLVCFVATLGATFSYLISYYIGRNLVRKLFPDKLKLFSDSLSQKRDN 241
Query: 70 F-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 128
++ LR+ P LP +N + VP+ + + ++IG+MP T V G ++++ +
Sbjct: 242 LLNYIVFLRITPFLPNWFINLASPLLDVPIHTFAIGTFIGIMPATFLAVKAGIQIQNIQN 301
>sp|O62126|TM41_CAEEL Transmembrane protein 41 homolog OS=Caenorhabditis elegans
GN=tag-175 PE=3 SV=1
Length = 246
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
GYLF V V + GA + + + G+ FV+ K + L+ R F
Sbjct: 96 SGYLFPFYVAIVLVCSCSATGAAICYTISKLFGRSFVLQKFPERIAKWQDDLSKHRDDFL 155
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P++P ++N V VPL + +++G+ P + + G+TL+ LS +
Sbjct: 156 NYMIFLRVTPIVPNWLINIASPVLDVPLAPFFWGTFLGVAPPSFLYIQAGSTLEQLSHTS 215
Query: 131 HGWN 134
W+
Sbjct: 216 VAWS 219
>sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1
Length = 393
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 71
G+++G+P G+ + G+ +FL RTI +V + +F ++AL ++ G K
Sbjct: 155 AGFVYGVPKGWAIVATSTVAGSTCSFLASRTILSTYVHRLVGKDKRFEALALTLKHDGIK 214
Query: 72 IVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLKDLS 127
I+ ++RL P LP+++ N ++ P V L Y LA+ + + P V++G+ L L+
Sbjct: 215 ILCMIRLCP-LPYSLSNAAVATFPTVHPLNYALATAL-VTPKLFIHVFIGSRLGSLA 269
>sp|P67118|Y1528_MYCBO TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1
Length = 252
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 5 ESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALA 64
++F L G LFG VG +G+T A A LL R G + ++ L +
Sbjct: 86 RTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATG--WQLNSLVRRRAINRLDER 143
Query: 65 IQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG 120
++ G+ +L LRL+P++PF +NY + V +L + A+ G++P T A+V +G
Sbjct: 144 LRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILG 199
>sp|P67117|Y1491_MYCTU TVP38/TMEM64 family membrane protein Rv1491c/MT1538
OS=Mycobacterium tuberculosis GN=Rv1491c PE=3 SV=1
Length = 252
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 5 ESSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALA 64
++F L G LFG VG +G+T A A LL R G + ++ L +
Sbjct: 86 RTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATG--WQLNSLVRRRAINRLDER 143
Query: 65 IQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG 120
++ G+ +L LRL+P++PF +NY + V +L + A+ G++P T A+V +G
Sbjct: 144 LRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILG 199
>sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=tvp38 PE=3 SV=1
Length = 410
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+F G++FG+ G++ + +G+ +F+ RT+ FV ++ +F ++AL +
Sbjct: 142 STFGTVSGFIFGVWKGWLLYASATVLGSICSFIASRTVLSKFVHRLVERDKRFAALALTL 201
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLK 124
+ G K++ ++RL P LP+++ N +S P V L Y LA+ I + P L ++G+ ++
Sbjct: 202 KYDGLKLLCMIRLCP-LPYSICNGAISTFPTVQPLMYGLATAI-ISPKLLVPAFIGSRIR 259
Query: 125 DLSDVTHGWNEFSKTRWVSLFSLILS 150
L++ + SK +++FS+I+S
Sbjct: 260 ILNEKGEEMSLGSKL--INIFSIIVS 283
>sp|A6RIB9|TVP38_BOTFB Golgi apparatus membrane protein tvp38 OS=Botryotinia fuckeliana
(strain B05.10) GN=tvp38 PE=3 SV=1
Length = 392
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 71
G+++G+P G+ + G+ +FL RTI +V + +F ++AL ++ G K
Sbjct: 154 AGFVYGVPKGWAIVASATVAGSLCSFLASRTILSSYVHRLVGKDKRFEALALTLKHDGIK 213
Query: 72 IVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTLKDLS 127
I+ ++RL P LP+++ N ++ P V L Y LA+ + + P V++G+ L L+
Sbjct: 214 ILCMIRLCP-LPYSLSNAAVATFPTVHPLNYALATAL-VTPKLFIHVFIGSRLGSLA 268
>sp|A1A5V7|TM41B_DANRE Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1
Length = 282
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
GYL+ P+ + + +GA ++L +G+P V L + Q S + R
Sbjct: 130 SGYLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPMVYKYLTERAQKWSQQVDKHREHLI 189
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P LP +N V VPL + L +++G+ P + + GTTL L+
Sbjct: 190 NYIIFLRITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPPSFVAINAGTTLYKLTTAG 249
Query: 131 HG--WN 134
WN
Sbjct: 250 EAVSWN 255
>sp|Q5U4K5|TM41B_XENLA Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1
Length = 278
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
G+L+ P+ + + +GA +LL +G+P V L D S + R
Sbjct: 126 SGFLYPFPLALFLVCLCSGLGASFCYLLSYLVGRPVVYKYLSDKAIKWSQQVERHRDHLI 185
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P LP +N V VPL + L ++IG+ P + + GTTL L+
Sbjct: 186 NYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAG 245
Query: 131 HG--WN 134
WN
Sbjct: 246 EAVSWN 251
>sp|A4II98|TM41B_XENTR Transmembrane protein 41B OS=Xenopus tropicalis GN=tmem41b PE=2
SV=1
Length = 278
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
G+L+ P+ + + +GA ++LL +G+P V L D S + R
Sbjct: 126 SGFLYPFPLALFLVCLCSGLGASFSYLLSYLVGRPVVYKYLSDKAIKWSQQVERHRDHLI 185
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P LP +N V VPL + L ++IG+ P + + GTTL L+
Sbjct: 186 NYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAG 245
Query: 131 HG--WN 134
WN
Sbjct: 246 EAVSWN 251
>sp|Q5ZIL6|TM41B_CHICK Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1
Length = 269
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
G+L+ P+ + + +GA ++L +G+P V L + S + R
Sbjct: 117 SGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSEQVERHREHLI 176
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P LP +N V VPL + + +++G+ P + + GTTL L+
Sbjct: 177 NYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAG 236
Query: 131 HGWNEFSKTRWVSLFSLIL 149
W SLF L++
Sbjct: 237 EA------VSWNSLFVLMI 249
>sp|Q5BJD5|TM41B_HUMAN Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1
Length = 291
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
G+L+ P+ + + +GA ++L +G+P V L + S + R
Sbjct: 139 SGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLI 198
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P LP +N V VPL + + +++G+ P + + GTTL L+
Sbjct: 199 NYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAG 258
Query: 131 HG--WN 134
WN
Sbjct: 259 EAVSWN 264
>sp|Q8K1A5|TM41B_MOUSE Transmembrane protein 41B OS=Mus musculus GN=Tmem41b PE=2 SV=1
Length = 291
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
G+L+ P+ + + +GA ++L +G+P V L + S + R
Sbjct: 139 SGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLI 198
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P LP +N V VPL + + +++G+ P + + GTTL L+
Sbjct: 199 NYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLHQLTTAG 258
Query: 131 HGWNEFSKTRWVSLFSLIL 149
W S+F L++
Sbjct: 259 EA------VSWSSVFILMV 271
>sp|Q5FVN2|TM41B_RAT Transmembrane protein 41B OS=Rattus norvegicus GN=Tmem41b PE=2 SV=1
Length = 291
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
G+L+ P+ + + +GA ++L +G+P V L + S + R
Sbjct: 139 SGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLI 198
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P LP +N V VPL + + +++G+ P + + GTTL L+
Sbjct: 199 NYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAG 258
Query: 131 HG--WN 134
WN
Sbjct: 259 EAVSWN 264
>sp|P76221|YDJZ_ECOLI TVP38/TMEM64 family inner membrane protein YdjZ OS=Escherichia coli
(strain K12) GN=ydjZ PE=1 SV=1
Length = 235
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 GAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLL 91
GA F + R +G+ V+ KL S+ R G +L+ RL+P +PF+ ++Y
Sbjct: 109 GAALCFFIARVMGRE-VVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAA 167
Query: 92 SVTPVPLLEYMLASWIGMMPITLALVYVGTTL 123
+T + + +A+ +G +P T+ + G+ L
Sbjct: 168 GLTSIRFRSFFIATGLGQLPATIVYSWAGSML 199
>sp|O07559|YHJE_BACSU Uncharacterized membrane protein YhjE OS=Bacillus subtilis (strain
168) GN=yhjE PE=4 SV=1
Length = 207
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 56/111 (50%)
Query: 16 FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLL 75
FGL GF+ G+T G+ FL+ R G+ ++ ++ +P R + L ++R GF + L
Sbjct: 55 FGLWEGFILSWAGSTAGSILVFLIVRQYGQRKLLGFIRSHPSVRKLMLWVERHGFGPMFL 114
Query: 76 LRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDL 126
L P P +N + ++ + ++LA+ G + + + ++G L L
Sbjct: 115 LLCFPFTPSAAVNVVAGLSRIGTRPFILAAASGKLVMIFMISFIGYDLHAL 165
>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=TVP38 PE=3 SV=1
Length = 383
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S+ + G ++G G++ + + G+ +FL+ R + + +FR+ + +
Sbjct: 118 SALSMLAGMVYGFVHGWILLACASISGSFCSFLVFRYLLHSRAERLMNSNKKFRAFSEIL 177
Query: 66 QR-SGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPLLEYMLASWIGMMPITLALVYVGTTL 123
+ S I++LLRL PL P+++ N L+ P +P Y LAS I P + ++VG L
Sbjct: 178 REDSSLFILVLLRLCPL-PYSLSNGALAAIPELPATTYFLASLI-TSPKLMIHIFVGHKL 235
Query: 124 KDLSDVTHGWNEFSKTRWVSLFSLILS 150
K+L D T G T + + S+I++
Sbjct: 236 KELGDDTKG----KSTHLIDILSIIIT 258
>sp|P54449|YQED_BACSU Uncharacterized protein YqeD OS=Bacillus subtilis (strain 168)
GN=yqeD PE=4 SV=1
Length = 208
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 71
G +FG G G+ +G F L R + + K++ YP +S + ++ F
Sbjct: 62 NGAVFGTANGIWITLTGSMLGTILLFFLARYSFRDWARKKVQAYPAIQSYEASFNKNAFT 121
Query: 72 IVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG---TTLKDLSD 128
VLL RL+P++P ++N + ++ V + AS IG +P + + G T+ K LS
Sbjct: 122 AVLLGRLIPVIPSLVMNVICGLSQVRWHVFFFASLIGKIPNIVVVTIAGANFTSNKLLSI 181
Query: 129 VTHG 132
+G
Sbjct: 182 SIYG 185
>sp|Q5RBZ8|TM41B_PONAB Transmembrane protein 41B OS=Pongo abelii GN=TMEM41B PE=2 SV=1
Length = 291
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGF- 70
G+L+ P+ + + +GA ++L +G+P V L + S + R
Sbjct: 139 SGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLI 198
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVT 130
++ LR+ P LP +N V VPL + + +++G+ P + + GTTL +
Sbjct: 199 NYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLHQPTTAG 258
Query: 131 HG--WN 134
WN
Sbjct: 259 EAVSWN 264
>sp|Q9VX39|TM41_DROME Transmembrane protein 41 homolog OS=Drosophila melanogaster
GN=CG8408 PE=2 SV=2
Length = 320
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 13 GYLFGLPVGFV----ADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRS 68
G+L+ P+ ++GAT+ + L+GR + + F K ++ + + S
Sbjct: 168 GFLYKFPIALFLICFCSALGATLCYTLSNLVGRRLIRHFWPKKTSEWSKHVE---EYRDS 224
Query: 69 GFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSD 128
F +L LR+ P+LP +N V VPL + L ++ G+ P ++ + G TL+ ++
Sbjct: 225 LFNYMLFLRMTPILPNWFINLASPVIGVPLHIFALGTFCGVAPPSVIAIQAGKTLQKMTS 284
Query: 129 VTHGWN 134
+ ++
Sbjct: 285 SSEAFS 290
>sp|Q96HV5|TM41A_HUMAN Transmembrane protein 41A OS=Homo sapiens GN=TMEM41A PE=2 SV=1
Length = 264
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR-SGF 70
G LFG +G + + ++GA +LL GK V+S D + R S F
Sbjct: 95 AGALFGPWLGLLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPDKVALLQRKVEENRNSLF 154
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLS--D 128
+L LRL P+ P LN + +P++++ + IG++P V G+ L L+ D
Sbjct: 155 FFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLTSLD 214
Query: 129 VTHGWNEFSKTRWVSLFSLI 148
W+ K +++ +LI
Sbjct: 215 ALFSWDTVFKLLAIAMVALI 234
>sp|Q9D8U2|TM41A_MOUSE Transmembrane protein 41A OS=Mus musculus GN=Tmem41a PE=2 SV=1
Length = 264
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR-SGF 70
G LFG +G + + ++GA +LL GK VIS D + R S F
Sbjct: 95 AGALFGPWLGLLLCCVLTSVGATGCYLLSSLFGKQLVISYFPDKVALLQKKVEENRNSLF 154
Query: 71 KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLS--D 128
+L LRL P+ P LN + +P++++ + IG++P V G+ L L+ D
Sbjct: 155 FFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLTSLD 214
Query: 129 VTHGWNEFSKTRWVSLFSLI 148
W K ++L +L+
Sbjct: 215 ALFSWETVLKLLAIALVALV 234
>sp|P06568|YTXB_BACSU TVP38/TMEM64 family membrane protein YtxB OS=Bacillus subtilis
(strain 168) GN=ytxB PE=3 SV=1
Length = 213
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI 65
S + GG FG +G + G+ + +F F K Y + ++ +
Sbjct: 64 SVISIAGGLAFGPLLGTLYTLFGSMCASAVSFFAAGL----FSAKKNGHYERLEAIQKQM 119
Query: 66 QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTL 123
+ +GF + LLR++P + F+ ++Y ++ V L Y A+ +G++P T+AL +G +
Sbjct: 120 EDNGFFYIFLLRILP-INFDFVSYAAGLSNVKALPYFAATAVGIIPGTIALNVLGASF 176
>sp|Q08D99|TM41A_BOVIN Transmembrane protein 41A OS=Bos taurus GN=TMEM41A PE=2 SV=1
Length = 264
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFK 71
G LFG +G + + ++GA +LL GK V+ D + R+G
Sbjct: 95 AGALFGPWLGLLLCCVLTSVGATGCYLLSSVFGKQLVVFYFPDKVALLQKKVEENRNGLF 154
Query: 72 IVLLLRL-VPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLS--D 128
LL P+ P LN + +P++++ + IG++P V G+ L L+ D
Sbjct: 155 FFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLTSLD 214
Query: 129 VTHGWNEFSKTRWVSLFSLI 148
W K ++L +L+
Sbjct: 215 ALFSWETAFKLLAIALVALV 234
>sp|Q502G2|T41AA_DANRE Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1
Length = 281
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 12 GGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQR---- 67
G LFG G + + T+GA FLL + GK ++ D VA+ ++
Sbjct: 112 AGALFGTWFGLLLTCVLTTVGATLCFLLSQAFGKHHIVKLFPD-----KVAMLQKKVEEN 166
Query: 68 --SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 125
S F +L LR P+ P LN + +P+ + +A +IG+MP V G+ L
Sbjct: 167 RSSLFFFLLFLRFFPMSPNWFLNMTSPILNIPVTLFFMAVFIGLMPYNFICVQTGSMLSQ 226
Query: 126 LSDV 129
+S +
Sbjct: 227 ISSL 230
>sp|Q759P7|TVP38_ASHGO Golgi apparatus membrane protein TVP38 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=TVP38 PE=3 SV=1
Length = 307
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 11 GGGYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQ-RS 68
G ++G+ G++ S+G +G+ AAF + +T+ + + ++ +F ++A +Q +
Sbjct: 137 SAGLVYGVSFKGWLIISLGTVLGSIAAFSVFKTVFRSYAERLIRLNDKFEALASILQDHN 196
Query: 69 GFKIVLLLRLVPLLPFNMLNYLLS-VTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLS 127
+ I+ LLRL P P+++ N ++ V + + + +A + P +++G+ LK+L
Sbjct: 197 SYWIIALLRLCP-FPYSLTNGAIAGVYGISIRNFSIAQ-VLTTPKLFMYLFIGSRLKNLG 254
Query: 128 D 128
+
Sbjct: 255 E 255
>sp|Q6NV38|T41AB_DANRE Transmembrane protein 41A-B OS=Danio rerio GN=tmem41ab PE=2 SV=1
Length = 278
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 20/152 (13%)
Query: 6 SSF-QLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALA 64
SSF + G LFG G + T+G+ +LL RT GK ++ + +P+ VA+
Sbjct: 99 SSFLNMLSGALFGPLHGLIIACTLTTVGSTNCYLLSRTFGKRHIV---RLFPE--KVAM- 152
Query: 65 IQR-------SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALV 117
+QR S F +L LR P+ P LN + +P+ + + IG++P V
Sbjct: 153 LQRMVEENRSSLFFFLLFLRFFPMTPNWFLNVTSPILNIPIPIFFFSILIGLIPYNFICV 212
Query: 118 YVGTTLKDLSDVTHGWNEFSKTRWVSLFSLIL 149
+ G L +++ + + FS W +L L+L
Sbjct: 213 HTGAVLSEINSLD---DIFS---WFTLLQLLL 238
>sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2
Length = 349
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 6 SSFQLGGGYLFGLPVGFVADSIGATIGAGAAFLLGR----TIGKPFVISKLKDYPQFRSV 61
S+ L G ++G P G+ + + G+ AFL+ R + G+ V S K FR+
Sbjct: 110 SALSLLAGMVYGFPYGWPLLASASVSGSFVAFLVFRYFLRSQGERLVNSNEK----FRAF 165
Query: 62 ALAIQR-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVG 120
A ++ S +++L+RL PL P+++ N L+ P L + + P L ++VG
Sbjct: 166 AEILREDSSLFLLVLIRLCPL-PYSLSNGALAAIPELSAWVYLGASVITSPKMLIHLFVG 224
Query: 121 TTLKDLSDVTHGWNEFSKTRWVSLFSLILS 150
+K+ D + T+ + + S++++
Sbjct: 225 HKIKEFGDAKTD----TSTKIIDVISILVT 250
>sp|P67116|Y641_MYCBO TVP38/TMEM64 family membrane protein Mb0641c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb0641c PE=3 SV=1
Length = 246
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 65 IQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLK 124
I+R G V+ R VP + +Y VPL + + ++IG P A +G +
Sbjct: 132 IERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAFIGSAPRAFAYTALGAAIG 191
Query: 125 DLS 127
D S
Sbjct: 192 DRS 194
>sp|P67115|Y625_MYCTU TVP38/TMEM64 family membrane protein Rv0625c/MT0653
OS=Mycobacterium tuberculosis GN=Rv0625c PE=3 SV=1
Length = 246
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 65 IQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLK 124
I+R G V+ R VP + +Y VPL + + ++IG P A +G +
Sbjct: 132 IERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAFIGSAPRAFAYTALGAAIG 191
Query: 125 DLS 127
D S
Sbjct: 192 DRS 194
>sp|Q57819|Y374_METJA Uncharacterized protein MJ0374 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0374 PE=4 SV=1
Length = 330
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 12 GGYLFGLP--VGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSG 69
G FGL + + +IG T+G + LG +G P I KL + G
Sbjct: 46 GASFFGLNPIISAIVATIGTTLGGLFGYFLGDKLGHPIFI-KLFGEKYLHKGEEFFNKYG 104
Query: 70 FKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD---L 126
V++ PL P+ ++ +L + + L + + + IG +P LA+ Y G L + L
Sbjct: 105 VYGVVIAGFSPL-PYKVIAWLSGIFEMHKLLFTVGTIIGRLPRFLAVAYFGDVLGNINRL 163
Query: 127 SDVT 130
SD+
Sbjct: 164 SDIN 167
>sp|O31823|YNGC_BACSU Uncharacterized membrane protein YngC OS=Bacillus subtilis (strain
168) GN=yngC PE=3 SV=1
Length = 198
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 12 GGYL-----FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAI- 65
GGY+ G +A IG TI + +GR G+PF + K Y + + +
Sbjct: 38 GGYMVSEGTIGFIGAIIAGVIGGTIAQIFIYWIGRYGGRPF-LDKYGKYLLIKKHHIDMS 96
Query: 66 ----QRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGT 121
Q+ G +V R +P++ + ++ + +P L++++ + + ++P ++ VY+G
Sbjct: 97 ENWFQKYGAGVVFSARFIPVVR-HAISIPAGIARMPFLKFVVLTVLAIIPWSILFVYLGI 155
Query: 122 TLKDLSD 128
L D
Sbjct: 156 QLGSQWD 162
>sp|A7TMU9|TVP38_VANPO Golgi apparatus membrane protein TVP38 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=TVP38 PE=3 SV=1
Length = 319
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 13 GYLFGLPV-GFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSG-F 70
G ++G+ G+V +IGA G+ +F L +TI ++ +F + A +Q + +
Sbjct: 144 GLIYGISFKGWVILAIGAVTGSICSFALFKTILHSRAEKLIQMNRRFAAFASILQENNSY 203
Query: 71 KIVLLLRLVPLLPFNMLNYLL-SVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDV 129
I+ LLRL P P+++ N + +V V + + + + I P L +++G+ +K++
Sbjct: 204 WILALLRLCP-FPYSLTNGAVGAVYGVSIKNFAIGNII-TTPKLLIYLFIGSRIKNM--- 258
Query: 130 THGWNEFSKTRWVSLFSLILS 150
G E S ++ L S++L+
Sbjct: 259 --GETESSASKIFDLVSILLT 277
>sp|Q2FPJ8|RL30E_METHJ 50S ribosomal protein L30e OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rpl30e PE=3 SV=1
Length = 95
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 11/43 (25%)
Query: 34 GAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLL 76
G+ LGR GKPF++S ALAI+ SG +L L
Sbjct: 62 GSGVQLGRACGKPFIVS-----------ALAIEESGDSDILTL 93
>sp|B4QL99|MAEL_DROSI Protein maelstrom OS=Drosophila simulans GN=mael PE=3 SV=1
Length = 394
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 91 LSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVS-LFSLIL 149
++ + +Y +A+ IG++P VY+G+TL+ + +V N+ T ++S LF +I
Sbjct: 300 CQISSINTRDYHVATLIGLLPAQTINVYLGSTLRSMHEVLSD-NDTKLTGYISFLFEVIC 358
>sp|B4IB36|MAEL_DROSE Protein maelstrom OS=Drosophila sechellia GN=mael PE=3 SV=1
Length = 394
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 91 LSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWVS-LFSLIL 149
++ + +Y +A+ IG++P VY+G+TL+ + +V N+ T ++S LF +I
Sbjct: 300 CQISSINTRDYHVATLIGLLPAQTINVYLGSTLRSMHEVLSD-NDTKLTGYISFLFEVIC 358
>sp|Q6ZR08|DYH12_HUMAN Dynein heavy chain 12, axonemal OS=Homo sapiens GN=DNAH12 PE=2 SV=2
Length = 3092
Score = 30.0 bits (66), Expect = 5.3, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 34 GAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLV---PLLPFNM--LN 88
GA L RT+GK + DYPQ ++ +++ GF + + + V PL+P L+
Sbjct: 60 GAKRNLDRTLGKRTPLLPPPDYPQ--TMTSEMKKKGFNYIYMKQCVESSPLVPIQQEWLD 117
Query: 89 YLLSVTPVPLLE 100
++L + P L E
Sbjct: 118 HMLRLIPESLKE 129
>sp|B4UGZ3|GCSPA_ANASK Probable glycine dehydrogenase [decarboxylating] subunit 1
OS=Anaeromyxobacter sp. (strain K) GN=gcvPA PE=3 SV=1
Length = 445
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 15 LFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSV-ALAIQRSGFKIV 73
L G+ V + GAT A AA + GR G+ V+ +P++R V A ++ +G +IV
Sbjct: 121 LTGMDVSNASMYDGATATAEAALMAGRITGRDKVVVSAALHPEYRKVLATYLRSTGDEIV 180
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.143 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,329,922
Number of Sequences: 539616
Number of extensions: 2094062
Number of successful extensions: 7421
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 7348
Number of HSP's gapped (non-prelim): 71
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)