Your job contains 1 sequence.
>031772
MLVWDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTA
NGLFQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEALLG
IVGLLDDLLIALLCFLHVAALYRAVLYNRHGGA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031772
(153 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006218 - symbol:AT1G72175 species:3702 "Ara... 496 2.0e-47 1
UNIPROTKB|F1NKI3 - symbol:RNF170 "Uncharacterized protein... 196 1.3e-15 1
TAIR|locus:2118919 - symbol:AT4G33940 species:3702 "Arabi... 194 2.0e-15 1
UNIPROTKB|F1MK05 - symbol:RNF170 "E3 ubiquitin-protein li... 190 5.4e-15 1
ZFIN|ZDB-GENE-040426-2572 - symbol:rnf170 "ring finger pr... 179 7.9e-14 1
UNIPROTKB|Q96K19 - symbol:RNF170 "E3 ubiquitin-protein li... 178 1.0e-13 1
MGI|MGI:1924983 - symbol:Rnf170 "ring finger protein 170"... 179 1.0e-13 1
UNIPROTKB|E2RGZ9 - symbol:RNF170 "Uncharacterized protein... 183 3.5e-13 1
UNIPROTKB|F1NCS0 - symbol:F1NCS0 "Uncharacterized protein... 95 0.00012 1
>TAIR|locus:505006218 [details] [associations]
symbol:AT1G72175 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR010652 Pfam:PF06803 eggNOG:NOG294660
KO:K15707 EMBL:AF370357 EMBL:AY059087 EMBL:AY084686 IPI:IPI00527784
RefSeq:NP_565037.1 UniGene:At.19073 ProteinModelPortal:Q93WJ5
SMR:Q93WJ5 PaxDb:Q93WJ5 PRIDE:Q93WJ5 EnsemblPlants:AT1G72175.1
GeneID:843549 KEGG:ath:AT1G72175 TAIR:At1g72175
HOGENOM:HOG000006373 InParanoid:Q93WJ5 OMA:PCQANCS PhylomeDB:Q93WJ5
ProtClustDB:CLSN2687913 ArrayExpress:Q93WJ5 Genevestigator:Q93WJ5
Uniprot:Q93WJ5
Length = 185
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 95/153 (62%), Positives = 118/153 (77%)
Query: 1 MLVWDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTA 60
MLVW HGSTLQ C+CPLCRR I+LL+P++D++R R+D V ++L +E+YNR+FGG +++
Sbjct: 35 MLVWRHGSTLQPCKCPLCRRHISLLVPSEDTIRDRNDATVKEVLGNLETYNRLFGGRSSS 94
Query: 61 NGLFQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEXXXX 120
L QR+QDLPFLLRRL+RE++DP R+LPLVIRARVYIAMI SAVYI SPIDIIPE
Sbjct: 95 --LVQRMQDLPFLLRRLLREMMDPQRTLPLVIRARVYIAMILSAVYIISPIDIIPEGVLG 152
Query: 121 XXXXXXXXXXXXXCFLHVAALYRAVLYNRHGGA 153
CFLHVAALYR+VLY RH G+
Sbjct: 153 VVGLLDDLLIALICFLHVAALYRSVLYFRHAGS 185
>UNIPROTKB|F1NKI3 [details] [associations]
symbol:RNF170 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000017123 OMA:DMSCPVC
InterPro:IPR010652 Pfam:PF06803 EMBL:AADN02066021 EMBL:AADN02075762
EMBL:AADN02075763 IPI:IPI00593193 Ensembl:ENSGALT00000024822
Uniprot:F1NKI3
Length = 287
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 45/146 (30%), Positives = 71/146 (48%)
Query: 4 WDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTANGL 63
W +GS L A RCP+CR+ +TL +P L +LQ V YNR F G + +
Sbjct: 146 WRYGSWLGAIRCPICRQTVTLFLP----LFSEDQQGATQVLQDVNDYNRRFSGQPRS--I 199
Query: 64 FQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEXXXXXXX 123
+RI DLP LLR RE+ L + R R+++ + + +Y+ SP+D +PE
Sbjct: 200 MERIMDLPTLLRHAFREMFSVG-GLFWMFRIRIFLCLFGAFLYLASPLDFLPEALFGILG 258
Query: 124 XXXXXXXXXXCFLHVAALYRAVLYNR 149
++++ +YR V+ R
Sbjct: 259 FLDDFFVIFLLLIYISIMYREVVTQR 284
>TAIR|locus:2118919 [details] [associations]
symbol:AT4G33940 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0000303 "response to superoxide"
evidence=RCA] [GO:0002679 "respiratory burst involved in defense
response" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009743 "response to carbohydrate stimulus"
evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BT021998 EMBL:BT024492
IPI:IPI00523581 RefSeq:NP_567943.1 UniGene:At.31536
ProteinModelPortal:Q501G9 SMR:Q501G9 PRIDE:Q501G9
EnsemblPlants:AT4G33940.1 GeneID:829539 KEGG:ath:AT4G33940
TAIR:At4g33940 eggNOG:NOG260925 InParanoid:Q501G9 OMA:IESESPP
ProtClustDB:CLSN2917659 Genevestigator:Q501G9 Uniprot:Q501G9
Length = 262
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 4 WDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTANGL 63
W++ + + C+CP+C R IT L P + SL++R + V ++L KV YNR+F G T G
Sbjct: 102 WNYAAISRPCKCPMCVRHITKLSP-EPSLQERQEQEVKEVLDKVRRYNRLFVGGLT--GF 158
Query: 64 FQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEXXXXXXX 123
Q++ +LPFL++R+V ++D + R++ AM S +Y + + IP
Sbjct: 159 VQKVHELPFLVKRMVWHMMDTDVNNLYFHEVRIF-AMFMSTLYTAAEFNFIPTGGFRIVT 217
Query: 124 XXXXXXXXXXCFLHVAALYR 143
L + +YR
Sbjct: 218 VFDYAAIAMILILRLVGIYR 237
>UNIPROTKB|F1MK05 [details] [associations]
symbol:RNF170 "E3 ubiquitin-protein ligase RNF170"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:DAAA02060959 IPI:IPI00699368
UniGene:Bt.78246 Ensembl:ENSBTAT00000047188
GeneTree:ENSGT00390000017123 OMA:DMSCPVC InterPro:IPR010652
Pfam:PF06803 Uniprot:F1MK05
Length = 259
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 45/146 (30%), Positives = 71/146 (48%)
Query: 4 WDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTANGL 63
W +GS L A CP+CR+ +TLL+P Q D V + Q + YNR F G + +
Sbjct: 116 WRYGSWLGAISCPICRQTVTLLLPVFGENDQSQD--VVSLHQDISDYNRRFSGQPRS--I 171
Query: 64 FQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEXXXXXXX 123
+RI DLP LLR RE+ L + R R+ + ++ + Y+ SP+D +PE
Sbjct: 172 MERIMDLPTLLRHAFREMFSVG-GLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILG 230
Query: 124 XXXXXXXXXXCFLHVAALYRAVLYNR 149
++++ +YR V+ R
Sbjct: 231 FLDDFFVIFLLLIYISIMYREVITQR 256
>ZFIN|ZDB-GENE-040426-2572 [details] [associations]
symbol:rnf170 "ring finger protein 170"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009790 "embryo development" evidence=IMP]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2572 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 GO:GO:0009790
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR010652 Pfam:PF06803 EMBL:BC056330 EMBL:BC069061
IPI:IPI00512000 RefSeq:NP_999915.1 UniGene:Dr.108674 HSSP:Q9CQJ4
ProteinModelPortal:Q7SZN2 GeneID:406612 KEGG:dre:406612 CTD:81790
eggNOG:NOG294660 HOGENOM:HOG000290642 HOVERGEN:HBG093906
InParanoid:Q7SZN2 KO:K15707 OrthoDB:EOG4NKBWC NextBio:20818159
Uniprot:Q7SZN2
Length = 266
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 45/154 (29%), Positives = 72/154 (46%)
Query: 4 WDHGSTLQACRCPLCRRRITLLIP----NDDSLRQRHDPAVGD-ILQKVESYNRIFGGPT 58
W +G+ L A CP+CR+ +TLL P ++ S P IL + YNR F G
Sbjct: 116 WRYGTWLGAISCPICRQMVTLLFPLFQDSEQSAVAADSPVEPTLILTDISDYNRRFSGQP 175
Query: 59 TANGLFQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEXX 118
+ L R++D+P LLR RE+ L + R R+ + + + Y+ SP+D +PE
Sbjct: 176 RS--LLDRLRDVPTLLRHAFREMFSVG-GLFWMFRVRILLCVCGALAYLVSPLDFLPEGV 232
Query: 119 XXXXXXXXXXXXXXXCFLHVAALYRAVLYNRHGG 152
F++++ +YR V+ R G
Sbjct: 233 LGLLGFLDDFFVILLLFIYISIMYREVVTQRLAG 266
>UNIPROTKB|Q96K19 [details] [associations]
symbol:RNF170 "E3 ubiquitin-protein ligase RNF170"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CH471080 GO:GO:0005789 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 EMBL:AC087533 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OMA:DMSCPVC
InterPro:IPR010652 Pfam:PF06803 CTD:81790 eggNOG:NOG294660
HOVERGEN:HBG093906 KO:K15707 EMBL:AK027748 EMBL:AK090864
EMBL:AC009634 EMBL:BC013422 EMBL:BC032393 EMBL:BC039461
EMBL:BC044566 EMBL:BC058289 EMBL:AL136620 EMBL:AF209504
IPI:IPI00166853 IPI:IPI00742872 IPI:IPI00829735 IPI:IPI00829763
IPI:IPI00830124 IPI:IPI00976275 RefSeq:NP_001153695.1
RefSeq:NP_001153696.1 RefSeq:NP_001153697.1 RefSeq:NP_112216.3
UniGene:Hs.491626 ProteinModelPortal:Q96K19 SMR:Q96K19
IntAct:Q96K19 PhosphoSite:Q96K19 DMDM:134035027 PRIDE:Q96K19
DNASU:81790 Ensembl:ENST00000240159 Ensembl:ENST00000319073
Ensembl:ENST00000319104 Ensembl:ENST00000526349
Ensembl:ENST00000527424 Ensembl:ENST00000534961 GeneID:81790
KEGG:hsa:81790 UCSC:uc003xpm.3 UCSC:uc003xpn.3 UCSC:uc003xpq.4
UCSC:uc011lcx.2 GeneCards:GC08M042705 HGNC:HGNC:25358 MIM:608984
MIM:614649 neXtProt:NX_Q96K19 PharmGKB:PA134922560
InParanoid:Q96K19 GenomeRNAi:81790 NextBio:72096
ArrayExpress:Q96K19 Bgee:Q96K19 CleanEx:HS_RNF170
Genevestigator:Q96K19 Uniprot:Q96K19
Length = 258
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 4 WDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTANGL 63
W +GS L A CP+CR+ +TLL+ Q D V + Q + YNR F G + +
Sbjct: 115 WRYGSWLGAISCPICRQTVTLLLTVFGEDDQSQD--VLRLHQDINDYNRRFSGQPRS--I 170
Query: 64 FQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEXXXXXXX 123
+RI DLP LLR RE+ L + R R+ + ++ + Y+ SP+D +PE
Sbjct: 171 MERIMDLPTLLRHAFREMFSVG-GLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILG 229
Query: 124 XXXXXXXXXXCFLHVAALYRAVLYNR 149
++++ +YR V+ R
Sbjct: 230 FLDDFFVIFLLLIYISIMYREVITQR 255
>MGI|MGI:1924983 [details] [associations]
symbol:Rnf170 "ring finger protein 170" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1924983
Prosite:PS00518 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 EMBL:CH466580
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
GeneTree:ENSGT00390000017123 OMA:DMSCPVC InterPro:IPR010652
Pfam:PF06803 CTD:81790 eggNOG:NOG294660 HOGENOM:HOG000290642
HOVERGEN:HBG093906 KO:K15707 OrthoDB:EOG4NKBWC EMBL:AK036051
EMBL:AK042063 EMBL:AK044579 EMBL:AK080591 EMBL:AK152760
EMBL:BC031383 EMBL:BC114210 EMBL:BC138930 EMBL:BC145718
IPI:IPI00228319 IPI:IPI00830235 IPI:IPI00830435 IPI:IPI00830547
IPI:IPI00831500 RefSeq:NP_084241.1 UniGene:Mm.291906
ProteinModelPortal:Q8CBG9 SMR:Q8CBG9 PhosphoSite:Q8CBG9
PaxDb:Q8CBG9 PRIDE:Q8CBG9 Ensembl:ENSMUST00000014022
Ensembl:ENSMUST00000110575 Ensembl:ENSMUST00000110579
Ensembl:ENSMUST00000153528 GeneID:77733 KEGG:mmu:77733
UCSC:uc009lhl.1 UCSC:uc009lhp.1 InParanoid:Q8CBG9 NextBio:347447
Bgee:Q8CBG9 CleanEx:MM_RNF170 Genevestigator:Q8CBG9 Uniprot:Q8CBG9
Length = 286
Score = 179 (68.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 45/146 (30%), Positives = 70/146 (47%)
Query: 4 WDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTANGL 63
W +GS L A CP+CR+ +TLL+ Q D V + Q V YNR F G + +
Sbjct: 143 WRYGSWLGAISCPICRQTVTLLLTVFGEDDQSQD--VIRLRQDVNDYNRRFSGQPRS--I 198
Query: 64 FQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEXXXXXXX 123
+RI DLP LLR RE+ L + R R+ + ++ + Y+ SP+D +PE
Sbjct: 199 MERIMDLPTLLRHAFREVFSVG-GLFWMFRIRIMLCLMGAFFYLISPLDFVPEALFGILG 257
Query: 124 XXXXXXXXXXCFLHVAALYRAVLYNR 149
++++ +YR V+ R
Sbjct: 258 FLDDFFVIFLLLIYISIMYREVITQR 283
>UNIPROTKB|E2RGZ9 [details] [associations]
symbol:RNF170 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000017123 InterPro:IPR010652
Pfam:PF06803 EMBL:AAEX03010368 Ensembl:ENSCAFT00000008712
OMA:THRVFAC Uniprot:E2RGZ9
Length = 639
Score = 183 (69.5 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 4 WDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGGPTTANGL 63
W +GS L A CP+CR+ +TLL+ Q D V + Q + YNR F G + +
Sbjct: 497 WRYGSWLGAISCPICRQTVTLLLTVFGENDQSQD--VVSLRQDINDYNRRFSGQPRS--I 552
Query: 64 FQRIQDLPFLLRRLVRELVDPHRSLPLVIRARVYIAMIFSAVYIFSPIDIIPEXXXXXXX 123
+RI DLP LLR RE+ L + R R+ + ++ + Y+ SP+D +PE
Sbjct: 553 MERIMDLPTLLRHAFREMFSVG-GLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILG 611
Query: 124 XXXXXXXXXXCFLHVAALYRAVLYNR 149
++++ +YR V+ R
Sbjct: 612 FLDDFFVIFLLLIYISIMYREVITQR 637
>UNIPROTKB|F1NCS0 [details] [associations]
symbol:F1NCS0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000017123 EMBL:AADN02012507
EMBL:AADN02012506 IPI:IPI00822105 Ensembl:ENSGALT00000038028
OMA:GEMALRS Uniprot:F1NCS0
Length = 138
Score = 95 (38.5 bits), Expect = 0.00012, P = 0.00012
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 4 WDHGSTLQACRCPLCRRRITLLIPNDDSLRQRHDPAVGDILQKVESYNRIFGG 56
W H L A CPLCR+++ +L ++ S + HD I+ + +YNR F G
Sbjct: 47 WKHSPWLGAIICPLCRQKVVVL--DNISCEKLHDKPSKQIVHDIRAYNRRFSG 97
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.332 0.146 0.463 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 153 136 0.00091 102 3 11 21 0.45 30
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 570 (61 KB)
Total size of DFA: 133 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.38u 0.14s 13.52t Elapsed: 00:00:01
Total cpu time: 13.38u 0.14s 13.52t Elapsed: 00:00:01
Start: Thu May 9 23:21:56 2013 End: Thu May 9 23:21:57 2013