Query 031773
Match_columns 153
No_of_seqs 186 out of 1151
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:50:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031773.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031773hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o1c_A Histidine triad nucleot 100.0 2.9E-42 9.9E-47 244.6 9.1 126 25-153 1-126 (126)
2 3n1s_A HIT-like protein HINT; 100.0 1.1E-37 3.8E-42 219.1 9.8 112 39-152 2-114 (119)
3 3oj7_A Putative histidine tria 100.0 2E-37 6.8E-42 216.9 9.9 108 42-152 9-116 (117)
4 1xqu_A HIT family hydrolase; p 100.0 1.7E-37 5.8E-42 225.6 9.9 134 17-152 11-146 (147)
5 4egu_A Histidine triad (HIT) p 100.0 2.2E-36 7.4E-41 212.1 9.1 110 39-150 3-113 (119)
6 3ksv_A Uncharacterized protein 100.0 7E-34 2.4E-38 206.9 10.2 104 39-147 10-116 (149)
7 3o0m_A HIT family protein; ssg 100.0 1.1E-33 3.8E-38 205.7 9.8 108 38-147 3-111 (149)
8 3l7x_A SMU.412C, putative HIT- 100.0 2.8E-34 9.5E-39 213.7 6.6 108 38-147 34-141 (173)
9 3imi_A HIT family protein; str 100.0 1.6E-33 5.4E-38 204.4 8.3 107 39-147 8-114 (147)
10 3lb5_A HIT-like protein involv 100.0 3E-33 1E-37 206.0 9.8 108 38-147 26-133 (161)
11 2eo4_A 150AA long hypothetical 100.0 8.4E-32 2.9E-36 195.5 9.4 104 42-147 1-104 (149)
12 1y23_A HIT, histidine triad pr 100.0 4.2E-32 1.4E-36 196.0 6.6 107 39-147 4-110 (145)
13 3r6f_A HIT family protein; str 100.0 3.5E-31 1.2E-35 189.5 6.5 99 39-147 5-103 (135)
14 1z84_A Galactose-1-phosphate u 100.0 1.4E-30 4.9E-35 212.4 10.2 126 16-147 190-320 (351)
15 3ano_A AP-4-A phosphorylase; d 100.0 1.5E-30 5E-35 199.9 9.1 108 39-148 68-177 (218)
16 1gup_A Galactose-1-phosphate u 100.0 1.7E-30 5.9E-35 211.7 8.9 136 16-153 170-315 (348)
17 3p0t_A Uncharacterized protein 100.0 1.6E-30 5.5E-35 186.5 7.6 103 39-148 4-106 (138)
18 1fit_A FragIle histidine prote 99.9 2.3E-27 7.7E-32 171.7 10.5 104 43-150 4-107 (147)
19 2oik_A Histidine triad (HIT) p 99.9 4.3E-27 1.5E-31 171.5 10.3 99 38-147 8-106 (154)
20 1ems_A Nitfhit, NIT-fragIle hi 99.9 2.4E-26 8.1E-31 191.6 10.6 107 39-150 296-403 (440)
21 3ohe_A Histidine triad (HIT) p 99.8 7.3E-21 2.5E-25 136.3 9.9 86 54-147 13-99 (137)
22 3i24_A HIT family hydrolase; s 99.8 1.6E-20 5.4E-25 136.4 8.9 90 54-151 13-105 (149)
23 3nrd_A Histidine triad (HIT) p 99.8 8.8E-19 3E-23 125.1 9.6 89 54-151 15-107 (135)
24 3i4s_A Histidine triad protein 99.7 1.4E-17 4.9E-22 120.7 9.5 87 54-151 18-110 (149)
25 3sp4_A Aprataxin-like protein; 99.7 2E-17 7E-22 125.1 3.1 89 56-146 23-126 (204)
26 3bl9_A Scavenger mRNA-decappin 99.2 7.6E-11 2.6E-15 93.6 10.3 99 43-146 139-248 (301)
27 1vlr_A MRNA decapping enzyme; 99.2 1.1E-10 3.6E-15 94.1 9.7 99 43-146 186-295 (350)
28 1z84_A Galactose-1-phosphate u 98.7 4E-08 1.4E-12 79.9 9.6 101 39-144 60-191 (351)
29 1gup_A Galactose-1-phosphate u 96.4 0.0065 2.2E-07 48.9 6.5 64 76-144 107-171 (348)
30 2pof_A CDP-diacylglycerol pyro 96.0 0.012 4.2E-07 44.7 5.8 81 57-143 34-120 (227)
31 3vg8_G Hypothetical protein TT 76.2 3.6 0.00012 27.5 4.0 27 116-143 74-100 (116)
32 3bp3_A Glucose-specific phosph 33.6 13 0.00045 23.2 0.9 15 3-17 17-36 (82)
33 1ts9_A Ribonuclease P protein 28.5 66 0.0023 20.9 3.7 26 54-84 35-60 (102)
34 3ipj_A PTS system, iiabc compo 28.5 18 0.00062 23.3 0.9 14 3-16 19-37 (95)
35 1iba_A Glucose permease; phosp 27.4 19 0.00064 23.6 0.8 19 3-21 26-49 (101)
36 1v76_A RNAse P protein PH1771P 24.2 94 0.0032 19.9 3.7 25 54-84 37-61 (96)
37 2gix_A Inward rectifier potass 23.8 81 0.0028 23.1 3.8 35 34-68 7-42 (208)
38 2zae_A Ribonuclease P protein 21.5 87 0.003 21.3 3.3 25 54-84 68-92 (127)
No 1
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=100.00 E-value=2.9e-42 Score=244.63 Aligned_cols=126 Identities=54% Similarity=0.966 Sum_probs=110.2
Q ss_pred hHHHHHHhhhcCCCCCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHH
Q 031773 25 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRL 104 (153)
Q Consensus 25 ~~~~~~~~~~~~~~~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l 104 (153)
+..|++.|++|+ .+++|+||+|+++|.+.++|||||.++||.|.+|.+|||+||+||+| +.++.+|++++.++++++
T Consensus 1 ~~~~~~~~~~~~-~~~~CiFC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~l 77 (126)
T 3o1c_A 1 MADEIAKAQVAR-PGGDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKH--ISQISAAEDADESLLGHL 77 (126)
T ss_dssp -----------C-TTCSSHHHHHHHTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCCGGGCCGGGHHHHHHH
T ss_pred CcchhhcccccC-CCCCCCcchhhcCCCcCCEEEECCCEEEEECCCCCCCceEEEEechH--hchHhhCchhHHHHHHHH
Confidence 356889999998 67889999999999999999999999999999999999999999999 899999999999999999
Q ss_pred HHHHHHHHHHhCCCCceEEEEecCCCCCCccceEEEEEeCCCCCCCCCC
Q 031773 105 LYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 153 (153)
Q Consensus 105 ~~~~~~~~~~~~~~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~~~w~~~ 153 (153)
+..+++++++++.++|||+++|+|+.+||+++|+|+|||||++++||+|
T Consensus 78 ~~~~~~~~~~~~~~~g~ni~~n~g~~agq~v~HlH~Hiipr~~~~~~~~ 126 (126)
T 3o1c_A 78 MIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126 (126)
T ss_dssp HHHHHHHHHHTTCTTCEEEECCCHHHHTCCSSSCCEEEEESSCCCSSCC
T ss_pred HHHHHHHHHHhCCCCCeEEEEecCCccCCccCEeEEEEeCCcccCCCCC
Confidence 9999999999877789999999999999999999999999999999997
No 2
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=100.00 E-value=1.1e-37 Score=219.08 Aligned_cols=112 Identities=52% Similarity=0.893 Sum_probs=105.1
Q ss_pred CCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhC-C
Q 031773 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEG-L 117 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~-~ 117 (153)
+++|+||+|++||.+.++|||||.++||.|.+|.+|||+||+||+| ++++.||+++|.+++++++..+++++++.+ .
T Consensus 2 ~~~CiFC~I~~ge~~~~iv~ede~~~af~d~~P~~pgH~LViPk~H--v~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~ 79 (119)
T 3n1s_A 2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMITVAAKIAEQEGIA 79 (119)
T ss_dssp CCCCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCChhhhhhcCCCcCCEEEECCCEEEEECCCCCCCCeEEEEehhH--hCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999999999999999 899999999999999999999999998753 4
Q ss_pred CCceEEEEecCCCCCCccceEEEEEeCCCCCCCCC
Q 031773 118 EDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPP 152 (153)
Q Consensus 118 ~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~~~w~~ 152 (153)
++|||+++|+|+.+||+++|+|+|||||++++|..
T Consensus 80 ~~g~ni~~n~g~~agq~V~HlH~Hiipr~~~~~~~ 114 (119)
T 3n1s_A 80 EDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPML 114 (119)
T ss_dssp TTCEEEEEEEHHHHTCCSSSCCEEEEESSCCCCSS
T ss_pred CCCeEEEEeCCCCcCCCcCEEEEEEeCCcccCccc
Confidence 68999999999999999999999999999998864
No 3
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=100.00 E-value=2e-37 Score=216.90 Aligned_cols=108 Identities=46% Similarity=0.901 Sum_probs=101.9
Q ss_pred ceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCCCCce
Q 031773 42 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGF 121 (153)
Q Consensus 42 C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 121 (153)
|+||+|+++|.+.++|||||.++||.|.+|.+|||+||+||+| ++++.||++++.+++++++..+++++++. ..++|
T Consensus 9 CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~l~~~~~~~~~~~-~~~g~ 85 (117)
T 3oj7_A 9 CIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQH--IASLNEITEENEAFIGKVLYKVSLIGKKE-CPEGY 85 (117)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CCSGGGCCTTTHHHHHHHHHHHHHHHHHH-CTTCE
T ss_pred CcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechH--hCCHHHCCHHHHHHHHHHHHHHHHHHHhc-CCCCe
Confidence 9999999999999999999999999999999999999999999 89999999999899999999888888862 23599
Q ss_pred EEEEecCCCCCCccceEEEEEeCCCCCCCCC
Q 031773 122 RIVINDGPNGGQSVFHIHVHLLGGRQMNWPP 152 (153)
Q Consensus 122 ni~~n~g~~~gq~v~HlHlHIIPr~~~~w~~ 152 (153)
|+++|+|+.+||+++|+|+|||||++++||+
T Consensus 86 ni~~n~g~~agq~v~H~H~Hiipr~~~~~~~ 116 (117)
T 3oj7_A 86 RVVNNIGEDAGQTVKHIHFHILGGKKLAWDK 116 (117)
T ss_dssp EEECCCSTTTTCCSSSCCEEEEESSCCCCCC
T ss_pred EEEEcCCCCCCeeeeEEEEEEeCCCCCCCCC
Confidence 9999999999999999999999999999986
No 4
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=100.00 E-value=1.7e-37 Score=225.61 Aligned_cols=134 Identities=37% Similarity=0.603 Sum_probs=106.2
Q ss_pred cCCCchhhhHH-HHHHhhhcCCCCCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchh
Q 031773 17 TSHLSAVVMAS-ENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEE 95 (153)
Q Consensus 17 ~~~~~p~~~~~-~~~~~~~~~~~~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~ 95 (153)
+||++|.--+. -+++.......+++|+||+|+++|.+.++|||||.++||.|++|.+|||+||+||+| +.++.||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~~~~m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrH--v~~l~dL~~ 88 (147)
T 1xqu_A 11 SSGLVPRGSQSTSLYKKAGLMYTLENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEH--IANVKEINE 88 (147)
T ss_dssp -----------------------CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSC--CSSGGGCCT
T ss_pred ccCcccCCccchhhHhhccchhccCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcc--cCChhHCCH
Confidence 56666643332 222222223345689999999999999999999999999999999999999999999 899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhCC-CCceEEEEecCCCCCCccceEEEEEeCCCCCCCCC
Q 031773 96 RHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPP 152 (153)
Q Consensus 96 ~~~~~l~~l~~~~~~~~~~~~~-~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~~~w~~ 152 (153)
++.++++++++.++++++.++. +++||+++|+|+.+||+++|+|+|||||++++||.
T Consensus 89 ~e~~~l~~l~~~~~~v~~~~~~~~~gyni~~n~g~~aGq~v~HlHlHiiP~~~~~wp~ 146 (147)
T 1xqu_A 89 SNAQILIDIHKAANKVAEDLGIAEKGYRLITNCGVAAGQTVFHLHYHLLGGVDMGPKI 146 (147)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTCTTTCEEEECCCSTTTTCCSCSCCEEEEESSCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCcccCCCccEEEEEEeCCCcCCCCC
Confidence 8888999999999999998864 67999999999999999999999999999999985
No 5
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=100.00 E-value=2.2e-36 Score=212.08 Aligned_cols=110 Identities=42% Similarity=0.731 Sum_probs=102.8
Q ss_pred CCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhC-C
Q 031773 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEG-L 117 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~-~ 117 (153)
+++|+||+|+++|.+.++|||||.++||+|.+|.+|||+||+||+| ++++.+|++++.+++++++..++++++.++ .
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~ 80 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKH--YDSLIDIPDKEMDIVSHIHVVINKIAKEKGFD 80 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSC--CSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechh--hCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999999999999999999999999999999 899999999988999999999999988865 3
Q ss_pred CCceEEEEecCCCCCCccceEEEEEeCCCCCCC
Q 031773 118 EDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNW 150 (153)
Q Consensus 118 ~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~~~w 150 (153)
+++||+++|+|+.+||+++|+|+|||||++++|
T Consensus 81 ~~~~ni~~n~g~~agq~v~HlH~Hiip~~~~~~ 113 (119)
T 4egu_A 81 QTGFRVINNCGSDGGQEVKHLHYHILAGKKLPN 113 (119)
T ss_dssp HHCEEEEEEETTTTTCCSCSCCEEEEESSCCCC
T ss_pred CCCEEEEEeCCCCCCCCcCEEEEEEeCCcccCc
Confidence 579999999999999999999999999998765
No 6
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=100.00 E-value=7e-34 Score=206.92 Aligned_cols=104 Identities=28% Similarity=0.401 Sum_probs=92.0
Q ss_pred CCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHh---
Q 031773 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQE--- 115 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~--- 115 (153)
..+|+||+|++||.|+++|||||.++||+|.+|.+|||+||+||+| +.++.+|++++ +.+++..++++.+++
T Consensus 10 ~~~~iFc~Ii~geip~~iV~ed~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e---~~~l~~~~~~v~~~l~~~ 84 (149)
T 3ksv_A 10 AANCIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEH--ASCLHELGMED---AADVGVLLAKASRAVAGP 84 (149)
T ss_dssp CTTCHHHHHHHTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHHH---HHHHHHHHHHHHHHHHCT
T ss_pred cccCHHHHHHcCCCCccEEEECCCEEEEECCCCCCCCEEEEEeChh--hhhhhhCCHHH---HHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999999999999999 89999998855 445555666666554
Q ss_pred CCCCceEEEEecCCCCCCccceEEEEEeCCCC
Q 031773 116 GLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 116 ~~~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
..++|||+++|+|+.+||+++|+|+|||||+.
T Consensus 85 ~~~~g~ni~~n~g~~aGq~v~HlHiHiiPR~~ 116 (149)
T 3ksv_A 85 DGSMQYNVLQNNGSLAHQEVPHVHFHIIPKTD 116 (149)
T ss_dssp TSCCEEEEEECCSTTTTCCSSSCCEEEEEECC
T ss_pred hCCCCEEEEEecCcccCCCCCEEEEEEEeccc
Confidence 34679999999999999999999999999984
No 7
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=100.00 E-value=1.1e-33 Score=205.66 Aligned_cols=108 Identities=30% Similarity=0.469 Sum_probs=93.1
Q ss_pred CCCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHh-C
Q 031773 38 SDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQE-G 116 (153)
Q Consensus 38 ~~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~-~ 116 (153)
.+++|+||+|+++|.+.++||||+.++||+|.+|.+|||+||+||+| +.++.+|++++...+.++++.+.+.+++. .
T Consensus 3 ~m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~ 80 (149)
T 3o0m_A 3 GSMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTH--TVDLTDTPPETVAGMAAVGQRIARAARESGL 80 (149)
T ss_dssp CTTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CCSTTTSCHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred CCCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechh--hCCHhHCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 36789999999999999999999999999999999999999999999 89999999866665555544433344444 3
Q ss_pred CCCceEEEEecCCCCCCccceEEEEEeCCCC
Q 031773 117 LEDGFRIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 117 ~~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
.+++||+++|+|+.+||+++|+|+|||||+.
T Consensus 81 ~~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~ 111 (149)
T 3o0m_A 81 HADGNNIAINDGKAAFQTVFHIHLHVVPRRN 111 (149)
T ss_dssp CCSEEEEECCCSGGGTCCSSSCCEEEEEECT
T ss_pred CCCceEEEEecCCCCCCccceEEEEEECCcc
Confidence 5789999999999999999999999999984
No 8
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=100.00 E-value=2.8e-34 Score=213.75 Aligned_cols=108 Identities=33% Similarity=0.483 Sum_probs=91.4
Q ss_pred CCCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCC
Q 031773 38 SDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL 117 (153)
Q Consensus 38 ~~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~ 117 (153)
.+++|+||+|+++|.+.++||||+.++||+|++|.+|||+||+||+| +.++.+|++++...|..+++.+.+.++....
T Consensus 34 ~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrH--v~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~ 111 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEH--VRNALEMTQTQAANLFARIPKIARALQKATK 111 (173)
T ss_dssp CCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CSCGGGCCHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred CCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccc--cCChhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45789999999999999999999999999999999999999999999 8999999886655555544432222222224
Q ss_pred CCceEEEEecCCCCCCccceEEEEEeCCCC
Q 031773 118 EDGFRIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 118 ~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
+++||+++|+|+.+||+++|+|+|||||+.
T Consensus 112 ~~g~ni~~n~g~~aGq~V~HlHiHiIPR~~ 141 (173)
T 3l7x_A 112 ADGLNIINNNEETAGQTVFHAHVHLVPRFA 141 (173)
T ss_dssp CSEEEEEECCSGGGTCCSCSCCEEEEEECC
T ss_pred CCCEEEEEecCcccCCCcCEEEEEEEeccc
Confidence 689999999999999999999999999985
No 9
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=100.00 E-value=1.6e-33 Score=204.43 Aligned_cols=107 Identities=34% Similarity=0.465 Sum_probs=91.1
Q ss_pred CCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCCC
Q 031773 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLE 118 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~~ 118 (153)
+++|+||+|+++|.+.++||||+.++||+|.+|.+|||+||+||+| +.++.+|++++...+..+++.+.+.++....+
T Consensus 8 m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H--~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~ 85 (147)
T 3imi_A 8 ADNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVH--KQDIFALTPEIASHIFSVVPKIANAIKAEFNP 85 (147)
T ss_dssp GGGCHHHHHHTTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CCSGGGCCHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred cCCCcCcccccCCCcCCEEEECCCEEEEEcCCCCCCcEEEEEEeec--cCChhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5689999999999999999999999999999999999999999999 89999999876555555444332222222346
Q ss_pred CceEEEEecCCCCCCccceEEEEEeCCCC
Q 031773 119 DGFRIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 119 ~~~ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
++||+++|+|+.+||+++|+|+|||||+.
T Consensus 86 ~~~ni~~n~g~~aGq~v~HlHiHiiPR~~ 114 (147)
T 3imi_A 86 VGFNLLNNNGEKAGQTVFHFHLHLIPRYG 114 (147)
T ss_dssp SEEEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred CCEEEEEeCCcccCCCcCEEEEEEeCCcc
Confidence 89999999999999999999999999985
No 10
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=100.00 E-value=3e-33 Score=205.98 Aligned_cols=108 Identities=35% Similarity=0.517 Sum_probs=91.5
Q ss_pred CCCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCC
Q 031773 38 SDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL 117 (153)
Q Consensus 38 ~~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~ 117 (153)
++++|+||+|+++|.+.++|||||.|+||+|++|.+|||+||+||+| +.++.+|++++...+..+++.+.+.+++...
T Consensus 26 ~~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~ 103 (161)
T 3lb5_A 26 YDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKG--SRNLLDADTETLFPVIKAVQKIAKAVKKAFQ 103 (161)
T ss_dssp CCTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSTTTSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeec--cchhhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999999999999999999 8999999986655554444432222222234
Q ss_pred CCceEEEEecCCCCCCccceEEEEEeCCCC
Q 031773 118 EDGFRIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 118 ~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
+++||+++|+|+.+||+++|+|+|||||+.
T Consensus 104 ~~g~ni~~n~g~~aGq~V~HlHiHiiPR~~ 133 (161)
T 3lb5_A 104 ADGITVMQFNEAASQQTVYHLHFHIIPRME 133 (161)
T ss_dssp CSEEEEEEEESGGGTCCSCSCCEEEEEECT
T ss_pred CCCEEEEEecCcccCCCCCEEEEEEEcccC
Confidence 679999999999999999999999999984
No 11
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.97 E-value=8.4e-32 Score=195.50 Aligned_cols=104 Identities=34% Similarity=0.524 Sum_probs=90.2
Q ss_pred ceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCCCCce
Q 031773 42 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGF 121 (153)
Q Consensus 42 C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 121 (153)
|+||+|+++|.+.++||||+.++||+|.+|.+|||+||+||+| +.++.+|++++...+..+++.+.+.++....+++|
T Consensus 1 CiFC~i~~~e~~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H--~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ 78 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKH--FENYLEADEDTLAELAKVVKLVSLGIKDAVKADGL 78 (149)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CcCcccccCCCCccEEEECCCEEEEECCCCCCCCeEEEEechh--hCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 9999999999999999999999999999999999999999999 89999999877665555554433333333456799
Q ss_pred EEEEecCCCCCCccceEEEEEeCCCC
Q 031773 122 RIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 122 ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
|+++|+|+.+||+++|+|+|||||+.
T Consensus 79 ni~~n~g~~~gq~v~HlHiHviPr~~ 104 (149)
T 2eo4_A 79 RLLTNIGRSAGQVIFHLHVHIIPTWE 104 (149)
T ss_dssp EEECCCSGGGTCCSCSCCEEEEEECS
T ss_pred EEEEecCcCCCCCcCEEEEEEECCcC
Confidence 99999999999999999999999984
No 12
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.97 E-value=4.2e-32 Score=195.98 Aligned_cols=107 Identities=33% Similarity=0.470 Sum_probs=91.1
Q ss_pred CCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCCC
Q 031773 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLE 118 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~~ 118 (153)
.++|+||+++++|.+.++||||+.++||+|.+|.+|||+||+||+| +.++.+|++++...+..+++.+.+.++....+
T Consensus 4 ~~~C~fC~i~~~e~~~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h--~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~ 81 (145)
T 1y23_A 4 AENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTH--IENVYEFTDELAKQYFHAVPKIARAIRDEFEP 81 (145)
T ss_dssp -CCCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSC--CSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCC
T ss_pred CCCCcCCccccCCCCCCEEEECCCEEEEECCCCCCCCeEEEEEhhh--hhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3679999999999999999999999999999999999999999999 89999999877665555544433333333346
Q ss_pred CceEEEEecCCCCCCccceEEEEEeCCCC
Q 031773 119 DGFRIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 119 ~~~ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
++||+++|+|+.+||+++|+|+|||||+.
T Consensus 82 ~~~ni~~n~g~~~g~~v~HlH~HiiPr~~ 110 (145)
T 1y23_A 82 IGLNTLNNNGEKAGQSVFHYHMHIIPRYG 110 (145)
T ss_dssp SEEEEEEEESGGGTCCSSSCCEEEEEECS
T ss_pred CCEEEEEcCCcCCCCCcCEEEEEEEcccc
Confidence 79999999999999999999999999984
No 13
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.97 E-value=3.5e-31 Score=189.55 Aligned_cols=99 Identities=27% Similarity=0.443 Sum_probs=87.7
Q ss_pred CCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCCC
Q 031773 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLE 118 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~~ 118 (153)
+++|+||+|++ .+.++|||||.++||+|.+|.+|||+||+||+| +.++.||++++ +.+++..++++.++++ +
T Consensus 5 ~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H--~~~l~dL~~~~---~~~l~~~~~~v~~~~~-~ 76 (135)
T 3r6f_A 5 MEGCIFCTLYR--KGANIIYETDRLFALIDRYPLSKGHFLVIPKAH--HPYLHNYKPEE---LSGVLDTIRHLVQKFG-F 76 (135)
T ss_dssp -CCCHHHHHHH--HCCSCCEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCGGG---GTTHHHHHHHHHHHHT-C
T ss_pred CCCCcCccccc--CCceEEEECCCEEEEECCCCCCCCeEEEEEhhH--hCCHhHCCHHH---HHHHHHHHHHHHHHhC-C
Confidence 57899999988 678999999999999999999999999999999 89999999865 4456667778877775 4
Q ss_pred CceEEEEecCCCCCCccceEEEEEeCCCC
Q 031773 119 DGFRIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 119 ~~~ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
++||+++|+|+ ||+++|+|+|||||+.
T Consensus 77 ~~~ni~~n~g~--gq~v~HlH~HiiPR~~ 103 (135)
T 3r6f_A 77 ERYNILQNNGN--HQEVFHVHFHVIPFVS 103 (135)
T ss_dssp CSEEEECCSSS--SCSSSSCCEEEEECCB
T ss_pred CCeEEEEEcCC--CCCccEEEEEEecccc
Confidence 69999999999 9999999999999983
No 14
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.97 E-value=1.4e-30 Score=212.43 Aligned_cols=126 Identities=16% Similarity=0.193 Sum_probs=112.3
Q ss_pred ecCCCchhhhHHHHHHhhhcCCCCCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchh
Q 031773 16 LTSHLSAVVMASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEE 95 (153)
Q Consensus 16 ~~~~~~p~~~~~~~~~~~~~~~~~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~ 95 (153)
++.-++|.++..|++++++||.++++|+||+|+++|. +|||||+|+||+|++|.+|||+||+||+| +.++.+|++
T Consensus 190 ~a~~~~p~~~~~e~~~~~~y~~~~~~ciFc~ii~~E~---iV~E~e~~~af~~~~p~~P~h~lViPk~H--v~~l~dl~~ 264 (351)
T 1z84_A 190 MALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHF---VIDESSHFVSVAPFAATYPFEIWIIPKDH--SSHFHHLDD 264 (351)
T ss_dssp EEESSCCHHHHHHHHHHHHHHHHHSSCTTTTHHHHSE---EEEECSSEEEEECTTCSSTTCEEEEESSC--CSCGGGCCH
T ss_pred EecCcCChHHHHHHHHHHHHHhhcCCCHHHHHHhcCe---EEecCCcEEEEeccCCCCCeEEEEEeccc--cCChHHCCH
Confidence 3566799999999999999999999999999999886 99999999999999999999999999999 899999999
Q ss_pred hHHHHHHHHHHHH-HHHHHHhCCCCceEEEEecCCCCC----CccceEEEEEeCCCC
Q 031773 96 RHCEILGRLLYTA-KLVAKQEGLEDGFRIVINDGPNGG----QSVFHIHVHLLGGRQ 147 (153)
Q Consensus 96 ~~~~~l~~l~~~~-~~~~~~~~~~~~~ni~~n~g~~~g----q~v~HlHlHIIPr~~ 147 (153)
++...|+++++.+ +++.+.++ +++||+++|+|+.+| |+++|||+||+||++
T Consensus 265 ~e~~~La~~l~~v~~~l~~~~~-~~~yn~~~n~gp~~g~~~~q~v~HlHiHiiPR~~ 320 (351)
T 1z84_A 265 VKAVDLGGLLKLMLQKIAKQLN-DPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLS 320 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-SCCEEEEEECCCTTCCGGGGGGCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEeCCCccCCCCCCccceEEEEEEccCC
Confidence 8888888877744 44444444 459999999999887 799999999999984
No 15
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.5e-30 Score=199.87 Aligned_cols=108 Identities=23% Similarity=0.313 Sum_probs=97.6
Q ss_pred CCCceeeeccccc-cCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCC
Q 031773 39 DSPTIFDKIINKE-IPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL 117 (153)
Q Consensus 39 ~~~C~fC~ii~~e-~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~ 117 (153)
.++|+||+|++++ .+.++|||++.++||+|.+|.+|||+||+||+| +.++.+|++++..+|..+++.+.++++....
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrH--v~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~ 145 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRR--VSELEDLTDLESAELMAFTQKAIRVIKNVSR 145 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSC--CCCGGGSCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechh--hCChhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4679999999984 678999999999999999999999999999999 8999999999988888888887777777777
Q ss_pred CCceEEEEecCCCCCCcc-ceEEEEEeCCCCC
Q 031773 118 EDGFRIVINDGPNGGQSV-FHIHVHLLGGRQM 148 (153)
Q Consensus 118 ~~~~ni~~n~g~~~gq~v-~HlHlHIIPr~~~ 148 (153)
+++||+++|+|+.+||++ +|+|+|||||+..
T Consensus 146 ~~g~ni~~n~G~~aGq~V~~HlHiHIIPR~~g 177 (218)
T 3ano_A 146 PHGFNVGLNLGTSAGGSLAEHLHVHVVPRWGG 177 (218)
T ss_dssp CSEEEEEEEESGGGTCTTTTSCCEEEEEECTT
T ss_pred CCCEEEEEecCcccCCcccCEEEEEEEcccCC
Confidence 789999999999999999 9999999999853
No 16
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.96 E-value=1.7e-30 Score=211.75 Aligned_cols=136 Identities=12% Similarity=0.155 Sum_probs=115.4
Q ss_pred ecCCCchhhhHHHHHHhhhcCCCCCCceeeeccccccCc--cEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcc
Q 031773 16 LTSHLSAVVMASENEAAVAAVPSDSPTIFDKIINKEIPS--KVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKA 93 (153)
Q Consensus 16 ~~~~~~p~~~~~~~~~~~~~~~~~~~C~fC~ii~~e~~~--~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l 93 (153)
.+...+|.++..|++++++||...++|+||+|+++|.+. ++|+||++|+||+|++|.+|||+||+||+| +.++.+|
T Consensus 170 ~a~~~~p~~~~~e~~~~~~y~~~~~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~H--v~~l~dL 247 (348)
T 1gup_A 170 WANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH--VLRITDL 247 (348)
T ss_dssp EEESSCCHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSC--CSSGGGC
T ss_pred EecccCChHHHHHHHHHHHHHhcCCCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcc--cCChHHC
Confidence 355679999999999999999999999999999998875 999999999999999999999999999999 8999999
Q ss_pred hhhHHHHHHHHHHH-HHHHHHHhCCCCceEEEEecCCCC--CCccceEEEEEeC---CCC--CCCCCC
Q 031773 94 EERHCEILGRLLYT-AKLVAKQEGLEDGFRIVINDGPNG--GQSVFHIHVHLLG---GRQ--MNWPPG 153 (153)
Q Consensus 94 ~~~~~~~l~~l~~~-~~~~~~~~~~~~~~ni~~n~g~~~--gq~v~HlHlHIIP---r~~--~~w~~~ 153 (153)
++++...|+++++. ++++.+.++...+||+++|.++.+ +|+++|||+|||| |+. .++.+|
T Consensus 248 ~~~e~~~La~~l~~v~~~l~~~~~~~~~Yn~g~~~~p~~g~~q~v~HlHiHiiPpl~R~~~~~~~~~g 315 (348)
T 1gup_A 248 TDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVG 315 (348)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECCCSSSSCCTTCCCEEEEECCBCSSSSCBCCCCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCCCCCCcccEEEEEEecchhccCCcccceee
Confidence 99888777777654 444444444334999999999875 4899999999999 874 345443
No 17
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.96 E-value=1.6e-30 Score=186.51 Aligned_cols=103 Identities=27% Similarity=0.470 Sum_probs=83.5
Q ss_pred CCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCCC
Q 031773 39 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLE 118 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~~ 118 (153)
.++|+||+|++||.+.++||||+.++||+|.+|.+|||+||+||+| +.++.+|++++...+..+++.+.+.++....+
T Consensus 4 ~~~CiFC~i~~~e~p~~iV~e~~~~~af~d~~P~~pgH~LViPk~H--~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~ 81 (138)
T 3p0t_A 4 SMASIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREE--IDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRT 81 (138)
T ss_dssp CHHHHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSC--CCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCChhhHHhcCCCCcCEEEeCCCEEEEecCCCCCCcEEEEEEhHH--hCchhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4579999999999999999999999999999999999999999999 89999999866555544444322222222345
Q ss_pred CceEEEEecCCCCCCccceEEEEEeCCCCC
Q 031773 119 DGFRIVINDGPNGGQSVFHIHVHLLGGRQM 148 (153)
Q Consensus 119 ~~~ni~~n~g~~~gq~v~HlHlHIIPr~~~ 148 (153)
+++|+. .+||+++|+|+|||||++.
T Consensus 82 ~~~n~~-----~~gq~v~HlH~HiiPr~~~ 106 (138)
T 3p0t_A 82 ERSGLI-----IAGLEVPHLHVHVFPTRSL 106 (138)
T ss_dssp SEEEEE-----ECCSSCSSCCEEEEEESCG
T ss_pred CCCcEE-----ECCcccCEEEEEEeccccC
Confidence 678775 3699999999999999853
No 18
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.95 E-value=2.3e-27 Score=171.74 Aligned_cols=104 Identities=22% Similarity=0.351 Sum_probs=84.0
Q ss_pred eeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCCCCceE
Q 031773 43 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFR 122 (153)
Q Consensus 43 ~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~~n 122 (153)
.||.+. ..+.++||||+.++||+|.+|.+|||+||+||+| +.++.+|++++...+..+++.+.+.++....+++||
T Consensus 4 ~f~~~~--ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h--~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 79 (147)
T 1fit_A 4 RFGQHL--IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRP--VERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLT 79 (147)
T ss_dssp EETTEE--ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSC--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred EecCcc--cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccc--cCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 566652 2247899999999999999999999999999999 899999998776655555444333334434567999
Q ss_pred EEEecCCCCCCccceEEEEEeCCCCCCC
Q 031773 123 IVINDGPNGGQSVFHIHVHLLGGRQMNW 150 (153)
Q Consensus 123 i~~n~g~~~gq~v~HlHlHIIPr~~~~w 150 (153)
+++|+|+.+||+++|+|+|||||++.+|
T Consensus 80 i~~n~g~~agq~v~HlH~HiiPr~~~d~ 107 (147)
T 1fit_A 80 FSMQDGPEAGQTVKHVHVHVLPRKAGDF 107 (147)
T ss_dssp EEECCSGGGTCCSSSCCEEEEEECTTC-
T ss_pred EEEecCCccCCCccEEEEEEECCcCCCC
Confidence 9999999999999999999999997654
No 19
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.94 E-value=4.3e-27 Score=171.52 Aligned_cols=99 Identities=10% Similarity=0.124 Sum_probs=82.0
Q ss_pred CCCCceeeeccccccCccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCC
Q 031773 38 SDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL 117 (153)
Q Consensus 38 ~~~~C~fC~ii~~e~~~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~ 117 (153)
.+++|+||++ .+.++||||+.++||+|.+|.+|||+||+||+| +.++.+|++++...+.++++.+.+.+++...
T Consensus 8 ~~~~C~FC~~----~~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H--~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~ 81 (154)
T 2oik_A 8 FHKNCELCTT----AGGEILWQDALCRVVHVENQDYPGFCRVILNRH--VKEMSDLRPAERDHLMLVVFAVEEAVREVMR 81 (154)
T ss_dssp CCTTCHHHHS----CCSEEEEECSSEEEEECCCTTCTTCEEEEESSC--CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCccCCC----CCCeEEEECCcEEEEEcCCCCCCeEEEEEecCC--cCChHHCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999984 467899999999999999999999999999999 8999999987776666665554444444445
Q ss_pred CCceEEEEecCCCCCCccceEEEEEeCCCC
Q 031773 118 EDGFRIVINDGPNGGQSVFHIHVHLLGGRQ 147 (153)
Q Consensus 118 ~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~ 147 (153)
+++||++ .+||+++|+|+|||||++
T Consensus 82 ~~g~ni~-----~~gq~v~HlHiHiiPr~~ 106 (154)
T 2oik_A 82 PDKINLA-----SLGNMTPHVHWHVIPRFK 106 (154)
T ss_dssp CSEEEEE-----ECCSSSCSCEEEEEEECT
T ss_pred CCcEEhH-----HhCCCCCEEEEEEeCCCC
Confidence 6799987 368999999999999985
No 20
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.93 E-value=2.4e-26 Score=191.62 Aligned_cols=107 Identities=21% Similarity=0.394 Sum_probs=88.2
Q ss_pred CCCceeeeccccccCc-cEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCC
Q 031773 39 DSPTIFDKIINKEIPS-KVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL 117 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~-~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~ 117 (153)
.+.|+||+ +|.+. ++||||++++||+|.+|.+|||+||+||+| +.++.+|++++...+..+++.+.+.++....
T Consensus 296 ~~~c~fc~---~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h--~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~ 370 (440)
T 1ems_A 296 TGGLKFAR---FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRV--VPRLTDLTDAETADLFIVAKKVQAMLEKHHN 370 (440)
T ss_dssp SSCCEETT---EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSC--CSCGGGSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCceeeec---cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccc--cCChhHCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 46799998 56774 799999999999999999999999999999 8999999986655544444433333333345
Q ss_pred CCceEEEEecCCCCCCccceEEEEEeCCCCCCC
Q 031773 118 EDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNW 150 (153)
Q Consensus 118 ~~~~ni~~n~g~~~gq~v~HlHlHIIPr~~~~w 150 (153)
+++||+++|+|+.+||+++|+|+|||||++.+|
T Consensus 371 ~~~~n~~~~~g~~~gq~v~HlH~Hiipr~~~d~ 403 (440)
T 1ems_A 371 VTSTTICVQDGKDAGQTVPHVHIHILPRRAGDF 403 (440)
T ss_dssp CSEEEEECCCSGGGTCCSSSCCEEEEEECSSCC
T ss_pred CCCeEEEEecCCCCCCCccEEEEEEeCCCCCCC
Confidence 679999999999999999999999999997653
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.84 E-value=7.3e-21 Score=136.33 Aligned_cols=86 Identities=14% Similarity=0.003 Sum_probs=70.6
Q ss_pred ccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHH-HHHHHHHHhCCCCceEEEEecCCCCC
Q 031773 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLY-TAKLVAKQEGLEDGFRIVINDGPNGG 132 (153)
Q Consensus 54 ~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~-~~~~~~~~~~~~~~~ni~~n~g~~~g 132 (153)
..+|+|++.++++++.+|.+|||+||+||+| +.++.||++++...+...+. +++.+.+.+ .++++|++ .+|
T Consensus 13 ~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~-~~~~~N~~-----~aG 84 (137)
T 3ohe_A 13 THKLGESRLCDVLLMNDNTWPWVILVPRVSG--IREIYELPNEQQQRLLFESSALSEGMMELF-GGDKMNVA-----ALG 84 (137)
T ss_dssp EEEEEECSSEEEEEESCTTSCEEEEEESCTT--CCSGGGSCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE-----ECC
T ss_pred cEEEEECCcEEEEEcCCCCCCEEEEEecccc--cCChHHCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEe-----ecc
Confidence 5789999999999999999999999999999 89999999877654444444 344444443 46788887 579
Q ss_pred CccceEEEEEeCCCC
Q 031773 133 QSVFHIHVHLLGGRQ 147 (153)
Q Consensus 133 q~v~HlHlHIIPr~~ 147 (153)
|+|+|+|+|||||++
T Consensus 85 q~V~HlH~HviPR~~ 99 (137)
T 3ohe_A 85 NMVPQLHLHHIVRYQ 99 (137)
T ss_dssp SSCCSCCEEEEEECT
T ss_pred CcCCEEEEEEeCCCC
Confidence 999999999999995
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.83 E-value=1.6e-20 Score=136.38 Aligned_cols=90 Identities=17% Similarity=0.145 Sum_probs=72.4
Q ss_pred ccEEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHH-HHHHHHHHhCCCCceEEEEecCCCCC
Q 031773 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLY-TAKLVAKQEGLEDGFRIVINDGPNGG 132 (153)
Q Consensus 54 ~~iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~-~~~~~~~~~~~~~~~ni~~n~g~~~g 132 (153)
..+|+|++.+++|++.+|.+|||+||+||+| +.++.||++++...+...+. +++.+.+.+ .++++|++ .+|
T Consensus 13 ~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~H--v~~l~dL~~e~~~~l~~~~~~va~al~~~~-~~~~~Ni~-----~aG 84 (149)
T 3i24_A 13 CIVLGNLPLCKVLLIKEDIGPWLILVPRIEE--LKEIHHMTDEQQIQFIKESSAVAQLLEDNF-SPDKINIG-----ALG 84 (149)
T ss_dssp EEEEEECSSEEEEEECBSSTTEEEEEESCTT--CSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEE-----ECC
T ss_pred CEEEEECCCEEEEEcCCCCCCEEEEEeCccc--cCChhHCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEh-----hhh
Confidence 5789999999999999999999999999999 89999999877654444443 344444444 46788887 379
Q ss_pred CccceEEEEEeCCCC--CCCC
Q 031773 133 QSVFHIHVHLLGGRQ--MNWP 151 (153)
Q Consensus 133 q~v~HlHlHIIPr~~--~~w~ 151 (153)
|+|+|+|+|||||++ ..|+
T Consensus 85 q~V~HlH~HvIPR~~~D~~~~ 105 (149)
T 3i24_A 85 NLVPQLHIHHIARFTTDVAWP 105 (149)
T ss_dssp SSCCSCCEEEEEECTTSTTTT
T ss_pred CCCCEEEEEEeCCccCCCCCC
Confidence 999999999999995 3465
No 23
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.78 E-value=8.8e-19 Score=125.15 Aligned_cols=89 Identities=18% Similarity=0.190 Sum_probs=68.7
Q ss_pred ccEEEEcCeEEEEecCCCCCCceEEEEec-CCCCCCCCCcchhhHHHHHHHHHH-HHHHHHHHhCCCCceEEEEecCCCC
Q 031773 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPK-VKDGLTGLSKAEERHCEILGRLLY-TAKLVAKQEGLEDGFRIVINDGPNG 131 (153)
Q Consensus 54 ~~iv~e~d~~va~~~~~p~~pgh~LViPk-rH~~~~~l~~l~~~~~~~l~~l~~-~~~~~~~~~~~~~~~ni~~n~g~~~ 131 (153)
..+|++++.++++++.+|.+|| +||||| +| +.++.||++++...+...+. +++.+.+.+ .++++|++ .+
T Consensus 15 ~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h--~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~-~~~~~N~~-----~a 85 (135)
T 3nrd_A 15 GIPIGTLGLCQMRLMNDRRWPW-LILVPQRAD--IKEVFELTPLDQAMLTFETNLVAAGLKKAT-GAEKINIG-----AL 85 (135)
T ss_dssp EEEEEECSSEEEEEESCTTSCE-EEEEECCTT--CCSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCSEEEEE-----EC
T ss_pred CEEEEECCcEEEEEcCCCCCCE-EEEEcCccc--cCChHHCCHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEe-----ec
Confidence 5789999999999999999995 578888 69 89999999877654444433 344444444 46788886 47
Q ss_pred CCccceEEEEEeCCCCC--CCC
Q 031773 132 GQSVFHIHVHLLGGRQM--NWP 151 (153)
Q Consensus 132 gq~v~HlHlHIIPr~~~--~w~ 151 (153)
||+|+|+|+|||||++. .||
T Consensus 86 Gq~V~HlH~HviPR~~~D~~~~ 107 (135)
T 3nrd_A 86 GNIVRQLHVHVIARREGDPNWP 107 (135)
T ss_dssp CSSCCSCCEEEEEECTTSTTTT
T ss_pred cCCCCEEEEEEecCCCCCCCCC
Confidence 99999999999999853 454
No 24
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.73 E-value=1.4e-17 Score=120.74 Aligned_cols=87 Identities=18% Similarity=0.238 Sum_probs=65.6
Q ss_pred ccEEEEcCeEEEEecCCCCCCceEEEEecC-CCCCCCCCcchhhHHHHHHHHHHHHHHHHHHh---CCCCceEEEEecCC
Q 031773 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKV-KDGLTGLSKAEERHCEILGRLLYTAKLVAKQE---GLEDGFRIVINDGP 129 (153)
Q Consensus 54 ~~iv~e~d~~va~~~~~p~~pgh~LViPkr-H~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~---~~~~~~ni~~n~g~ 129 (153)
..++.|.+.++++....| +++|+|||||+ | +.++.||++++...+ +..++++.+++ ..+++||++
T Consensus 18 ~~~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H--~~~l~dL~~e~~~~l---~~~~~~va~~l~~~~~~~g~N~~----- 86 (149)
T 3i4s_A 18 TIDIGDLPLSKVLVIKDA-NYPWLLLVPRRPD--AVEIIDLDEVQQAQL---MTEISRVSRALKEITKCDKLNIA----- 86 (149)
T ss_dssp EEEEEECSSEEEEEESCT-TSCEEEEEECCTT--CCSGGGSCHHHHHHH---HHHHHHHHHHHHHHHTCSEEEEE-----
T ss_pred CEEEEEcCceEEEECCCC-CCCEEEEEecccc--cCChhHCCHHHHHHH---HHHHHHHHHHHHHhcCCCeEEEe-----
Confidence 468899999999998655 55599999999 9 899999988665444 44444443332 346788876
Q ss_pred CCCCccceEEEEEeCCCCC--CCC
Q 031773 130 NGGQSVFHIHVHLLGGRQM--NWP 151 (153)
Q Consensus 130 ~~gq~v~HlHlHIIPr~~~--~w~ 151 (153)
.+||+|+|+|+|||||++. .||
T Consensus 87 ~aGq~V~HlH~HvIPR~~~D~~~p 110 (149)
T 3i4s_A 87 ALGNLVPQLHVHIIARRTGDAAWP 110 (149)
T ss_dssp ECCSSCCSCCEEEEEECTTSTTTT
T ss_pred ecCCcCCEEEEEEECCcCCCCCCC
Confidence 5799999999999999853 454
No 25
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=99.66 E-value=2e-17 Score=125.08 Aligned_cols=89 Identities=21% Similarity=0.329 Sum_probs=64.4
Q ss_pred EEEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCCcchh---hHHHHHHHHHHHHH-HHHH-Hh--------CCC--Cc
Q 031773 56 VVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEE---RHCEILGRLLYTAK-LVAK-QE--------GLE--DG 120 (153)
Q Consensus 56 iv~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~~l~~---~~~~~l~~l~~~~~-~~~~-~~--------~~~--~~ 120 (153)
+|||||.++||.|.+|.+|||+|||||+| +.++.+..+ ++.+++..|...+. ++++ .. +.+ .+
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h--~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~ 100 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDP--HLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEA 100 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCT--TTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccc--cCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCC
Confidence 99999999999999999999999999999 788776543 23566777766666 4322 21 111 12
Q ss_pred eEEEEecCCCCCCccceEEEEEeCCC
Q 031773 121 FRIVINDGPNGGQSVFHIHVHLLGGR 146 (153)
Q Consensus 121 ~ni~~n~g~~~gq~v~HlHlHIIPr~ 146 (153)
|...++.|..+++++.|||+|||.+.
T Consensus 101 ~~~~i~~GfHa~PSm~HLHLHVIS~D 126 (204)
T 3sp4_A 101 LCNYIKVGFHAGPSMNNLHLHIMTLD 126 (204)
T ss_dssp HHTTEEEEEESSCSSSSCCEEEEESC
T ss_pred eeeeEeccCCCCCcccceeEEEeccC
Confidence 32234455557789999999999864
No 26
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=99.21 E-value=7.6e-11 Score=93.57 Aligned_cols=99 Identities=19% Similarity=0.321 Sum_probs=81.8
Q ss_pred eeeecccc-ccCccEEEEcCe----EEEEecCC----CCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 031773 43 IFDKIINK-EIPSKVVYEDDK----VLAFRDID----PQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAK 113 (153)
Q Consensus 43 ~fC~ii~~-e~~~~iv~e~d~----~va~~~~~----p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~ 113 (153)
+.=+|+.+ +.+++++|||+. |+++.|.. |...-|+|+||++|. +.++.||+.++..+|..|...++++++
T Consensus 139 Wv~nIl~~~~E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~-I~SlrdL~~~HlpLL~~M~~~~~~~i~ 217 (301)
T 3bl9_A 139 WVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRG-IRSLRDLTPEHLPLLRNILHQGQEAIL 217 (301)
T ss_dssp HHHHHHTTSSSGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSC-CCSGGGCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccC-CCChHHCCHhHHHHHHHHHHHHHHHHH
Confidence 33445655 345799999988 99999987 789999999999984 899999999999999999999998887
Q ss_pred Hh-C-CCCceEEEEecCCCCCCccceEEEEEeCCC
Q 031773 114 QE-G-LEDGFRIVINDGPNGGQSVFHIHVHLLGGR 146 (153)
Q Consensus 114 ~~-~-~~~~~ni~~n~g~~~gq~v~HlHlHIIPr~ 146 (153)
.. + ..+.++++++..| ++.|||+|||...
T Consensus 218 ~~y~~~~~~~rlgfHy~P----S~yHLHlHvis~~ 248 (301)
T 3bl9_A 218 QRYRMKGDHLRVYLHYLP----SYYHLHVHFTALG 248 (301)
T ss_dssp HHHCCCGGGEEEEEESSC----SSSSCEEEEEETT
T ss_pred HhcCCChHHeEEEecCCC----CcceEEEEEEecC
Confidence 64 3 2457899998765 7899999999654
No 27
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=99.18 E-value=1.1e-10 Score=94.09 Aligned_cols=99 Identities=18% Similarity=0.322 Sum_probs=80.3
Q ss_pred eeeecccc-ccCccEEEEcCe----EEEEecCC----CCCCceEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 031773 43 IFDKIINK-EIPSKVVYEDDK----VLAFRDID----PQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAK 113 (153)
Q Consensus 43 ~fC~ii~~-e~~~~iv~e~d~----~va~~~~~----p~~pgh~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~ 113 (153)
+.=+|+.+ +.+.+++|||+. |++|.|.. |...-|+|+||++|. +.++.||+.++..+|..|...+++++.
T Consensus 186 Wv~nIl~~~~E~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~d-I~SlRdL~~~HlpLL~~M~~~~~~ii~ 264 (350)
T 1vlr_A 186 WVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRG-IRSLRDLTPEHLPLLRNILREGQEAIL 264 (350)
T ss_dssp HHHHHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSC-CCSGGGCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCccccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccC-CCChHHCCHhHHHHHHHHHHHHHHHHH
Confidence 33445655 345799999988 99999987 789999999999984 899999999999999999999998887
Q ss_pred Hh-C-CCCceEEEEecCCCCCCccceEEEEEeCCC
Q 031773 114 QE-G-LEDGFRIVINDGPNGGQSVFHIHVHLLGGR 146 (153)
Q Consensus 114 ~~-~-~~~~~ni~~n~g~~~gq~v~HlHlHIIPr~ 146 (153)
.. + ..+.+.++++..| ++.|||+|||...
T Consensus 265 ~~yg~~~~~lRlgfHy~P----S~yHLHlHvis~~ 295 (350)
T 1vlr_A 265 KRYQVTGDRLRVYLHYLP----SYYHLHVHFTALG 295 (350)
T ss_dssp HHHCCCGGGEEEEEESSC----SSSSCEEEEEETT
T ss_pred HhcCCChHHeEEEecCCC----CcceEEEEEEecc
Confidence 64 3 2457899998765 7899999999644
No 28
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.75 E-value=4e-08 Score=79.85 Aligned_cols=101 Identities=18% Similarity=0.187 Sum_probs=71.5
Q ss_pred CCCceeeeccccccCccEEE-----EcCeEEEEecCCCCCC------------c-----------eEEEEecCCCCCCCC
Q 031773 39 DSPTIFDKIINKEIPSKVVY-----EDDKVLAFRDIDPQAP------------T-----------HILIIPKVKDGLTGL 90 (153)
Q Consensus 39 ~~~C~fC~ii~~e~~~~iv~-----e~d~~va~~~~~p~~p------------g-----------h~LViPkrH~~~~~l 90 (153)
+..|+||.-.....+..+.. .+-.+++|.+.+|..+ | +++|.+.+| ..++
T Consensus 60 ~~~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H--~~~l 137 (351)
T 1z84_A 60 PSSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVH--SIQL 137 (351)
T ss_dssp -CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSS--SCCG
T ss_pred CCCCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCC--CCCc
Confidence 44799998433332332222 3456899999999984 4 889999999 6889
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHhC---CCCceEEEEecCCCCCCccceEEEEEeC
Q 031773 91 SKAEERHCEILGRLLYTAKLVAKQEG---LEDGFRIVINDGPNGGQSVFHIHVHLLG 144 (153)
Q Consensus 91 ~~l~~~~~~~l~~l~~~~~~~~~~~~---~~~~~ni~~n~g~~~gq~v~HlHlHIIP 144 (153)
.+|+.++.. +++...++-.+.+. ....++++.|.|+.+|.++.|.|.||+.
T Consensus 138 ~~ls~~e~~---~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a 191 (351)
T 1z84_A 138 SDIDPVGIG---DILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMA 191 (351)
T ss_dssp GGSCHHHHH---HHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEE
T ss_pred HHCCHHHHH---HHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEe
Confidence 999875544 45555444444443 2446788999999999999999999985
No 29
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=96.40 E-value=0.0065 Score=48.93 Aligned_cols=64 Identities=13% Similarity=0.078 Sum_probs=41.1
Q ss_pred eEEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHhCCCCce-EEEEecCCCCCCccceEEEEEeC
Q 031773 76 HILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGF-RIVINDGPNGGQSVFHIHVHLLG 144 (153)
Q Consensus 76 h~LViPkrH~~~~~l~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~~-ni~~n~g~~~gq~v~HlHlHIIP 144 (153)
.++|-..+| -.++.+++.++.. +++....+-.+.+...-.| .+..|.|+.+|.|..|-|..|+.
T Consensus 107 ~VIi~sp~H--~~~l~~l~~~~~~---~vi~~~~~r~~~l~~~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a 171 (348)
T 1gup_A 107 RVICFSPDH--SKTLPELSVAALT---EIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPGGQIWA 171 (348)
T ss_dssp EEEESCSCT--TCCGGGSCHHHHH---HHHHHHHHHHHHHHHHCSEEEEEEEESGGGTCSCCSSEEEEEE
T ss_pred EEEEcCCcc--cCChhhCCHHHHH---HHHHHHHHHHHHHhhcCCEEEEecccCCcCCcCCCCCceeEEe
Confidence 455556688 6889998875544 3444333222222211123 45688999999999999999874
No 30
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=96.03 E-value=0.012 Score=44.71 Aligned_cols=81 Identities=17% Similarity=0.350 Sum_probs=48.6
Q ss_pred EEEcCeEEEEecCCCCCCceEEEEecCCCCCCCCC---cchhhHHHHHHHHHHHHHHHHHHhCC--C-CceEEEEecCCC
Q 031773 57 VYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLS---KAEERHCEILGRLLYTAKLVAKQEGL--E-DGFRIVINDGPN 130 (153)
Q Consensus 57 v~e~d~~va~~~~~p~~pgh~LViPkrH~~~~~l~---~l~~~~~~~l~~l~~~~~~~~~~~~~--~-~~~ni~~n~g~~ 130 (153)
|.....+++|-| +..|.|.|+||... ++-+. -+++.....|..-...-..+.++++. + +...+.+|.-
T Consensus 34 Vd~~~gyvvlKD--~~Gp~qyLLmPt~r--ItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~-- 107 (227)
T 2pof_A 34 VKPNAGYVVLKD--LNGPLQYLLMPTYR--INGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSR-- 107 (227)
T ss_dssp EETTTTEEEEEC--SSSSSCEEEEESSC--CCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCG--
T ss_pred EccCCCEEEEeC--CCCCceEEEecccc--ccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCC--
Confidence 344566777777 56899999999876 44443 23332223343322222234555654 2 3467788864
Q ss_pred CCCccceEEEEEe
Q 031773 131 GGQSVFHIHVHLL 143 (153)
Q Consensus 131 ~gq~v~HlHlHII 143 (153)
.|-+..||||||=
T Consensus 108 ~gRSQnQLHIHIs 120 (227)
T 2pof_A 108 TGRTQNHFHIHIS 120 (227)
T ss_dssp GGCSCCSCCEEEE
T ss_pred CCccccceeeehh
Confidence 4778899999974
No 31
>3vg8_G Hypothetical protein TTHB210; alpha and beta proteins (A+B), unknown function; 2.20A {Thermus thermophilus}
Probab=76.21 E-value=3.6 Score=27.45 Aligned_cols=27 Identities=30% Similarity=0.465 Sum_probs=21.7
Q ss_pred CCCCceEEEEecCCCCCCccceEEEEEe
Q 031773 116 GLEDGFRIVINDGPNGGQSVFHIHVHLL 143 (153)
Q Consensus 116 ~~~~~~ni~~n~g~~~gq~v~HlHlHII 143 (153)
...|..++.+| +...|-+++|.|+|+.
T Consensus 74 ~~vDHVdi~~~-~gHpGve~PHyhI~l~ 100 (116)
T 3vg8_G 74 TRIDHVNMIPS-GPHPGVSEPHYHIELV 100 (116)
T ss_dssp CCCCEEEEEEC-CCCTTCCSCEEEEEEE
T ss_pred CccceEEEecC-CCCCCcccCceEEEEE
Confidence 35678898887 4467999999999986
No 32
>3bp3_A Glucose-specific phosphotransferase enzyme IIB component; transcription regulation, inner membrane, kinase, membrane, phosphoprotein; 1.65A {Escherichia coli} PDB: 1o2f_B 3bp8_C
Probab=33.55 E-value=13 Score=23.18 Aligned_cols=15 Identities=47% Similarity=0.601 Sum_probs=11.9
Q ss_pred ccccce-----eceeeeeec
Q 031773 3 KENISS-----TSSRLAVLT 17 (153)
Q Consensus 3 ~~~~~~-----~~~~~~~~~ 17 (153)
++||.. ||.|+.+--
T Consensus 17 ~~NI~~v~~C~TRLR~~lkD 36 (82)
T 3bp3_A 17 KENITNLDACITRLRVSVAD 36 (82)
T ss_dssp GGGEEEEEECSSEEEEEESC
T ss_pred HHHHhhhccccceEEEEEeC
Confidence 678876 999999943
No 33
>1ts9_A Ribonuclease P protein component 1; anti-parallel, beta-sheet, alpha helix, internal salt bridge, selenomethionine, SM-fold, hydrolase; 1.70A {Archaeoglobus fulgidus} SCOP: b.137.1.1 PDB: 1tsf_A 1pc0_A
Probab=28.52 E-value=66 Score=20.92 Aligned_cols=26 Identities=19% Similarity=0.249 Sum_probs=22.7
Q ss_pred ccEEEEcCeEEEEecCCCCCCceEEEEecCC
Q 031773 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVK 84 (153)
Q Consensus 54 ~~iv~e~d~~va~~~~~p~~pgh~LViPkrH 84 (153)
..+|.|+.+.+.+.. .+.+.+|||++
T Consensus 35 GiVV~ETkntf~I~t-----~~~~k~VPK~~ 60 (102)
T 1ts9_A 35 GEVVDETQNTLKIMT-----EKGLKVVAKRG 60 (102)
T ss_dssp EEEEEECSSEEEEEE-----SSSEEEEECTT
T ss_pred EEEEEeccceEEEEe-----CCcEEEEECCC
Confidence 578999999999886 46899999998
No 34
>3ipj_A PTS system, iiabc component; iiabc component,PSI, structural genomics, MCSG, structure initiative; 1.20A {Clostridium difficile}
Probab=28.51 E-value=18 Score=23.30 Aligned_cols=14 Identities=43% Similarity=0.463 Sum_probs=11.3
Q ss_pred ccccce-----eceeeeee
Q 031773 3 KENISS-----TSSRLAVL 16 (153)
Q Consensus 3 ~~~~~~-----~~~~~~~~ 16 (153)
++||.. ||.|+.+-
T Consensus 19 ~eNI~~v~~C~TRLR~~lk 37 (95)
T 3ipj_A 19 EDNIISITHCATRLRVMVK 37 (95)
T ss_dssp GGGEEEEEECSSEEEEEES
T ss_pred HHHhhhhhhccceeEEEEe
Confidence 678876 99999983
No 35
>1iba_A Glucose permease; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane, inner membrane, phoshphotransferase; NMR {Escherichia coli} SCOP: d.95.1.1
Probab=27.38 E-value=19 Score=23.55 Aligned_cols=19 Identities=37% Similarity=0.399 Sum_probs=13.6
Q ss_pred ccccce-----eceeeeeecCCCc
Q 031773 3 KENISS-----TSSRLAVLTSHLS 21 (153)
Q Consensus 3 ~~~~~~-----~~~~~~~~~~~~~ 21 (153)
++||.. ||.|+++--.-.+
T Consensus 26 ~eNI~~v~~C~TRLR~~lkD~s~V 49 (101)
T 1iba_A 26 KENITNLDACITRLRVSVADVSKV 49 (101)
T ss_dssp CTTCSBCCCCTTEEECBCSTTSSC
T ss_pred HHHHhhhcccCceEEEEEeCcccc
Confidence 678876 9999999444333
No 36
>1v76_A RNAse P protein PH1771P; RNA binding protein, archaeal RNAse P protein; 2.00A {Pyrococcus horikoshii} SCOP: b.137.1.1
Probab=24.19 E-value=94 Score=19.89 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=22.2
Q ss_pred ccEEEEcCeEEEEecCCCCCCceEEEEecCC
Q 031773 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVK 84 (153)
Q Consensus 54 ~~iv~e~d~~va~~~~~p~~pgh~LViPkrH 84 (153)
..+|.|+.+.+.+.. ..+.+|||.+
T Consensus 37 GiVV~ET~ntf~I~t------~~~~~VPK~~ 61 (96)
T 1v76_A 37 GYVIDETRNMLVIAG------DRIWKVPKDV 61 (96)
T ss_dssp EEEEEECSSEEEEES------SSEEEEESTT
T ss_pred EEEEEeccceEEEEc------CCEEEEECCC
Confidence 578999999999987 3899999998
No 37
>2gix_A Inward rectifier potassium channel 2; cytoplasmic domains of KIR2.1, andersen'S mutation, metal transport; 2.02A {Mus musculus}
Probab=23.77 E-value=81 Score=23.10 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=23.1
Q ss_pred hcCCCCCCceeeeccccccC-ccEEEEcCeEEEEec
Q 031773 34 AAVPSDSPTIFDKIINKEIP-SKVVYEDDKVLAFRD 68 (153)
Q Consensus 34 ~~~~~~~~C~fC~ii~~e~~-~~iv~e~d~~va~~~ 68 (153)
+|-.+++.|.|+++.+.... ..+++.+.-+++-.|
T Consensus 7 ~~~~~~~~~vfakisrP~kRa~tI~FS~~AVI~~~d 42 (208)
T 2gix_A 7 RFVKKDGHCNVQFINVGEKRNETLVFSHNAVIAMRD 42 (208)
T ss_dssp CSBCTTSCBCEEEECCCCSCSCSEEECSCEEEEEET
T ss_pred cccccCceEEEEEecCCcccCCcEEecCeEEEEEeC
Confidence 45677899999999876533 356665555555433
No 38
>2zae_A Ribonuclease P protein component 1; ribonuclease P protein subunits, hetero dimer, hydrolase, TR processing; 2.21A {Pyrococcus horikoshii} PDB: 2ki7_A
Probab=21.53 E-value=87 Score=21.25 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=22.2
Q ss_pred ccEEEEcCeEEEEecCCCCCCceEEEEecCC
Q 031773 54 SKVVYEDDKVLAFRDIDPQAPTHILIIPKVK 84 (153)
Q Consensus 54 ~~iv~e~d~~va~~~~~p~~pgh~LViPkrH 84 (153)
..+|.|+.+.+.+.. ..+.+|||.+
T Consensus 68 GiVV~ETknTf~I~t------~~~k~VPK~~ 92 (127)
T 2zae_A 68 GYVIDETRNMLVIAG------DRIWKVPKDV 92 (127)
T ss_dssp EEEEEEETTEEEEES------SSEEEEESTT
T ss_pred EEEEEcccceEEEEc------CCEEEEECCC
Confidence 568999999999987 4899999998
Done!