BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031775
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SSK9|MLP28_ARATH MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1
Length = 335
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 93/151 (61%), Gaps = 4/151 (2%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
+LVGK+E +EI+ A+KF+H++ + +HV ASP NI+ D+HEG+W GS+ W Y
Sbjct: 21 SLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYV 80
Query: 62 VEGRTETFKEKVE--HDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCS 119
+G + KE++E D N+ +T +EGD+ K +KS+L +V+PK G GSI
Sbjct: 81 HDGEAKVAKERIEAVEPDKNL-ITFRVIEGDLMKEYKSFLLTIQVTPK-PGGPGSIVHWH 138
Query: 120 IAYEKLNANVPDPVAYVDFMVSITKDVADHI 150
+ YEK++ V P + F V ++K++ +H+
Sbjct: 139 LEYEKISEEVAHPETLLQFCVEVSKEIDEHL 169
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
+LVGK+E +EI+ AEKF+H++ + +HV ASP NI+ D+HEG+W GS+ W Y
Sbjct: 183 SLVGKLETDVEIKASAEKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGQVGSIVFWNYV 242
Query: 62 VEGRTETFKEKVEHDDANMS-VTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSI 120
+ + KE++E + N + +T ++GD+ K +KS+L +V+PK G GSI +
Sbjct: 243 HDREAKVAKERIEAVEPNKNLITFRVIDGDLMKEYKSFLLTIQVTPKL-GGPGSIVHWHL 301
Query: 121 AYEKLNANVPDPVAYVDFMVSITKDVADHI 150
YEK++ V P + F V ++K++ +H+
Sbjct: 302 EYEKISEEVAHPETLLQFCVEVSKEIDEHL 331
>sp|Q9ZVF3|ML328_ARATH MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=1 SV=1
Length = 151
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Query: 1 MALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTY 60
MA G ++ ++ AEK Y W+ +++ P A +I+ V +H+GEW HG++K+W Y
Sbjct: 1 MATSGTYVTEVPLKGSAEKHYKRWRSENHLFPDAIGHHIQGVTIHDGEWDSHGAIKIWNY 60
Query: 61 SVEGRTETFKEKVEHDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSI 120
+ +G+ E FKE+ E DD NM+VT GLEG V + K + +++ K I ++
Sbjct: 61 TCDGKPEVFKERREIDDENMAVTFRGLEGHVMEQLKVYDVIFQFIQKSPDDI--ICKITM 118
Query: 121 AYEKLNANVPDPVAYVDFMVSITKDVADHITKG 153
+EK N ++P+P Y+ F+ S+ D+ DH+ K
Sbjct: 119 IWEKQNDDMPEPSNYMKFVKSLAADMDDHVLKA 151
>sp|Q9SSK7|MLP34_ARATH MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1
Length = 316
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 94/151 (62%), Gaps = 4/151 (2%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
+LVGK+E ++EI+ A +F+H++ + +HV ASP NI++ D+HEG+W GS+ W Y
Sbjct: 8 SLVGKLETEVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYV 67
Query: 62 VEGRTETFKEKVE--HDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCS 119
+G + KE++E + N+ +T +EGD+ K +KS+L +V+PK G GSI
Sbjct: 68 HDGEAKVAKERIEAVEPEKNL-ITFRVIEGDLMKEYKSFLITIQVTPK-HGGPGSIVHWH 125
Query: 120 IAYEKLNANVPDPVAYVDFMVSITKDVADHI 150
+ YEK++ V P + F V +++++ +H+
Sbjct: 126 LEYEKISDEVAHPETLLQFCVEVSQEIDEHL 156
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 13 IEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYSVEGRTETFKEK 72
I+ AEKF+H++ + +HV A+P NI++ D+HEG+W GS+ W Y +G + KE+
Sbjct: 175 IKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVAKER 234
Query: 73 VEHDDANMS-VTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSIAYEKLNANVPD 131
+E D + +T +EGD+ K +KS++ +V+PK GS GS+ YEK+N V
Sbjct: 235 IEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGS-GSVVHWHFEYEKINEEVAH 293
Query: 132 PVAYVDFMVSITKDVADHI 150
P + F V ++K++ +H+
Sbjct: 294 PETLLQFAVEVSKEIDEHL 312
>sp|Q941R6|MLP31_ARATH MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=1 SV=2
Length = 171
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
+L GK+E IEI+ A KF+H++ + +HV A+P I+ ++HEG+W GS+ W Y
Sbjct: 19 SLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYV 78
Query: 62 VEGRTETFKEKVE--HDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCS 119
+G + KE++E + N+ +T +EGD+ K +KS++ +V+PK G GS+
Sbjct: 79 HDGEAKVAKERIEAVEPEKNL-ITFRVIEGDLLKEYKSFVITIQVTPK-RGGPGSVVHWH 136
Query: 120 IAYEKLNANVPDPVAYVDFMVSITKDVADHI 150
+ YEK++ V P ++DF V ++K++ +H+
Sbjct: 137 VEYEKIDDKVAHPETFLDFCVEVSKEIDEHL 167
>sp|Q9SSK5|MLP43_ARATH MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=2 SV=1
Length = 158
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
+LVGK+E ++EI+ A+KF+H++ ++ +HV A+P I ++HEG+W GS+ +W Y
Sbjct: 6 SLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYV 65
Query: 62 VEGRTETFKEKVEHDDANMS-VTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSI 120
+G+ K K+E D + +T LEGD+ +KS+ +V+PK G +GSIA +
Sbjct: 66 HDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPK-QGESGSIAHWHL 124
Query: 121 AYEKLNANVPDPVAYVDFMVSITKDVADHI 150
YEK++ V P + F V I+K++ +H+
Sbjct: 125 EYEKISEEVAHPETLLQFCVEISKEIDEHL 154
>sp|Q9ZVF2|ML329_ARATH MLP-like protein 329 OS=Arabidopsis thaliana GN=MLP329 PE=2 SV=1
Length = 151
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 2/153 (1%)
Query: 1 MALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTY 60
MA G ++ ++ A+K Y W+ +++ P A +I+ V VH+GEW H ++K+W Y
Sbjct: 1 MATSGTYVTEVPLKGSADKHYKRWRDENHLFPDAIGHHIQGVTVHDGEWDSHEAIKIWNY 60
Query: 61 SVEGRTETFKEKVEHDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSI 120
+ +G+ E FKE+ E DD NM +T GLEG V + K + +Y+ S K + ++
Sbjct: 61 TCDGKPEVFKERKEIDDENMVITFRGLEGHVMEQLKVYDLIYQFSQKSPDDI--VCKITM 118
Query: 121 AYEKLNANVPDPVAYVDFMVSITKDVADHITKG 153
+EK + P+P Y+ F+ S+ D+ +H+ K
Sbjct: 119 IWEKRTDDSPEPSNYMKFLKSVVADMDEHVLKA 151
>sp|P85524|KIRO_ACTDE Kirola OS=Actinidia deliciosa PE=1 SV=1
Length = 150
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 4/150 (2%)
Query: 1 MALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTY 60
M L GK+ KQ+EI FY I++ + Y + SP NI+ VD+ EG W GSV + Y
Sbjct: 1 MDLSGKMVKQVEILSDGIVFYEIFRYRLYLISEMSPVNIQGVDLLEGNWGTVGSVIFFKY 60
Query: 61 SVEGRTETFKEKVEH-DDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCS 119
+++G+ +T K+ VE D+ SVT +EGD+ + +K+++ + +V KG+ ++ T +
Sbjct: 61 TIDGKEKTAKDIVEAIDEETKSVTFKIVEGDLMELYKTFIIIVQVDTKGEHNS---VTWT 117
Query: 120 IAYEKLNANVPDPVAYVDFMVSITKDVADH 149
YEKL +V +P ++F + ITKD+ +
Sbjct: 118 FHYEKLKEDVEEPNTLMNFCIEITKDIETY 147
>sp|P19825|MLP15_PAPSO Major latex protein 15 OS=Papaver somniferum GN=MLP15 PE=2 SV=2
Length = 159
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
LVGK+ + E+ A+K+Y I+K +P+A P +V EG G VK W Y
Sbjct: 9 GLVGKLITESEVNCNADKYYQIFKHHE-DLPSAIPHIYTSVKAVEGHGTTSGCVKEWCYI 67
Query: 62 VEGRTETFKEKVEHDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSIA 121
+EG+ T KEK ++D ++ G+EG + +K ++ V PK +G GSI T +
Sbjct: 68 LEGKPLTVKEKTTYNDETRTINHNGIEGGMMNDYKKFVATLVVKPKANGQ-GSIVTWIVD 126
Query: 122 YEKLNANVPDPVAYVDFMVSITKDVADHIT 151
YEK+N + P P Y+ F +D+ H+
Sbjct: 127 YEKINEDSPVPFDYLAFFQQNIEDLNSHLC 156
>sp|Q9C7I7|ML165_ARATH MLP-like protein 165 OS=Arabidopsis thaliana GN=MLP165 PE=2 SV=1
Length = 152
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 3/146 (2%)
Query: 6 KIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYSVEGR 65
+IE ++I+ A+KF H + ++S HVP A+ IK D+ EGEW GS+ LW +G
Sbjct: 5 EIEVDVDIKTRADKF-HKFIRRSQHVPKAT-HYIKGCDLLEGEWGKVGSILLWKLVFDGE 62
Query: 66 TETFKEKVE-HDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSIAYEK 124
K+ +E D+ + L LEG + K +KS+L KV G GS+ ++ YE+
Sbjct: 63 PRVSKDMIEVIDEEKNVIQLRVLEGPLKKEYKSFLKTMKVMSPKHGGPGSVVKWNMKYER 122
Query: 125 LNANVPDPVAYVDFMVSITKDVADHI 150
++ NV P + F V +TK++ ++
Sbjct: 123 IDQNVDHPNRLLQFFVEVTKEIDQYL 148
>sp|Q06395|ML149_PAPSO Major latex protein 149 OS=Papaver somniferum GN=MLP149 PE=2 SV=1
Length = 159
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
LVGK+ + E+ A+K+Y I+K +P+A P + + EG G VK W Y
Sbjct: 9 GLVGKLVMETEVNCNADKYYQIYKHHE-DLPSAIPHIVTSAKAVEGHGTTSGCVKEWGYM 67
Query: 62 VEGRTETFKEKVEHDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSIA 121
EG+T T KEK ++D ++ EGD+ +K + V PK +G GSI +
Sbjct: 68 HEGKTLTCKEKTTYNDETRTICHSISEGDLMNDYKKFDATLVVDPKDNGH-GSIVKYILD 126
Query: 122 YEKLNANVPDPVAYVDFMVSITKDVADHIT 151
YEK+N + P P+ Y+ T+D+ ++
Sbjct: 127 YEKINEDSPVPIHYLALCNQATEDLNTYLC 156
>sp|Q06394|ML146_PAPSO Major latex protein 146 OS=Papaver somniferum GN=MLP146 PE=2 SV=1
Length = 159
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
LVGK+ + E+ A+K+Y ++K +P+ P +V EG G VK W Y
Sbjct: 9 GLVGKLVMESEVNCNADKYYKLYKHHE-DLPSVIPHIYTSVKAVEGHGTTSGCVKEWGYI 67
Query: 62 VEGRTETFKEKVEHDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSIA 121
+EG+ + KEK ++D ++ + + GD+ +K + V+PK +G G I +I
Sbjct: 68 LEGKPLSCKEKTTYNDETRTIHHMVVAGDLMNDYKKFDATLVVNPKSNGH-GCIVKWTID 126
Query: 122 YEKLNANVPDPVAYVDFMVSITKDVADHIT 151
YEK+N + P P Y+ IT+D++ H+
Sbjct: 127 YEKMNEDSPVPFGYLACYQQITEDLSSHLC 156
>sp|Q41020|MLP22_PAPSO Major latex protein 22 OS=Papaver somniferum GN=MLP22 PE=2 SV=1
Length = 158
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 2 ALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYS 61
LVGK+ ++E+ A+++Y I+K +P A P + V EG+ G +K W Y
Sbjct: 10 GLVGKLVTELEVNCNADEYYKIFKHHE-DLPNAIPHIYRGVKAVEGDRITSGFIKEWHYI 68
Query: 62 VEGRTETFKEKVEHDDANMSV---TLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATC 118
+EG+ T KE+ ++D ++ T+ G+ D +K F + L V+PK DG GSI T
Sbjct: 69 IEGKPLTCKERTTYEDEARTIHHSTVEGVLLDDYKKFDATL----VNPKADGH-GSIVTW 123
Query: 119 SIAYEKLNANVPDPVAYVDF 138
+ YEK+N + P P++Y+ F
Sbjct: 124 IVEYEKINEDSPVPISYLTF 143
>sp|Q9C7I3|ML168_ARATH MLP-like protein 168 OS=Arabidopsis thaliana GN=MLP168 PE=2 SV=1
Length = 151
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 13 IEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYSVEGRTETFKEK 72
I+ A+KF+ ++ ++S H A+ ++ D+ EGEW GS+ LW +V+G + K+
Sbjct: 12 IKSTADKFF-MFSRRSQHASKATRY-VQGCDLLEGEWGEVGSILLWKLTVDGEPKVSKDM 69
Query: 73 VEHDDANMS-VTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSIATCSIAYEKLNANVPD 131
+E D M+ + LEG + + + + KVSPK GS GS+ ++ YE+++ V
Sbjct: 70 IEAIDMKMNMIQWRVLEGPLKEEYNIFSKTMKVSPKQGGS-GSVVKWNLKYERIDEKVAH 128
Query: 132 PVAYVDFMVSITKDVADHI 150
+ F V ++ ++
Sbjct: 129 LERLLQFFVECVNEIDQYL 147
>sp|Q93VR4|ML423_ARATH MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=1 SV=1
Length = 155
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 1 MALVGKIEKQIEIEVPAEKFYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTY 60
M L G + ++E++ PAEKF+ P A P + K + V G+ + GS++L TY
Sbjct: 1 MGLSGVLHVEVEVKSPAEKFWVALGDGINLFPKAFPNDYKTIQVLAGDGNAPGSIRLITY 60
Query: 61 SVEGR-----TETFKEKVEHDDANMSVTLIGLEGDVFKHFKSWLPVYKVSPKGDGSAGSI 115
EG + E V+ ++ +MS ++IG G++ +++K++ V PK DG GS+
Sbjct: 61 G-EGSPLVKISAERIEAVDLENKSMSYSIIG--GEMLEYYKTFKGTITVIPK-DG--GSL 114
Query: 116 ATCSIAYEKLNANVPDPVAYVDFMVSITKDVADHITK 152
S +EK + DP DF V K++ +++ K
Sbjct: 115 LKWSGEFEKTAHEIDDPHVIKDFAVKNFKEIDEYLLK 151
>sp|A8IC17|Y3148_AZOC5 UPF0262 protein AZC_3148 OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=AZC_3148 PE=3 SV=1
Length = 162
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Query: 20 FYHIWKKQSYHVPTASPANIKAVDVHEGEWHHHGSVKLWTYSVEGRTETFKEKVE--HDD 77
++ I + + TASP I+A+D+ H+ GS L E K+KVE D
Sbjct: 96 YFLICESYYAAIRTASPTQIEAIDMGRRGLHNEGSTLLQ--------ERLKDKVEVDFDT 147
Query: 78 ANMSVTLI 85
A TLI
Sbjct: 148 ARRLFTLI 155
>sp|Q7PVZ2|MED17_ANOGA Mediator of RNA polymerase II transcription subunit 17 OS=Anopheles
gambiae GN=MED17 PE=3 SV=2
Length = 645
Score = 29.6 bits (65), Expect = 8.2, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 105 SPKGDGSAGSIATCSIAYEKLNANVPDPVAYVDFMVSIT-KDVADHIT 151
SP G G+AG++A C L NVP + V F+ IT KD D T
Sbjct: 227 SPSGSGAAGTVA-CPKINSALRVNVPTELQGVAFIKVITQKDQEDLCT 273
>sp|A1U0K1|GLGB_MARAV 1,4-alpha-glucan branching enzyme GlgB OS=Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8) GN=glgB PE=3 SV=1
Length = 631
Score = 29.3 bits (64), Expect = 9.9, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 39 IKAVDVHEGEWHHHGSVKLWTY 60
I +VH G W HHGS + TY
Sbjct: 148 ISVYEVHPGSWRHHGSGRWLTY 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,398,645
Number of Sequences: 539616
Number of extensions: 2506108
Number of successful extensions: 5729
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 5681
Number of HSP's gapped (non-prelim): 32
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)