Query 031783
Match_columns 153
No_of_seqs 132 out of 1115
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 08:04:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 1.9E-54 6.6E-59 310.4 19.2 150 3-152 2-151 (151)
2 2c2v_B Ubiquitin-conjugating e 100.0 1.1E-53 3.7E-58 307.4 17.1 150 3-152 3-152 (154)
3 1z2u_A Ubiquitin-conjugating e 100.0 5.9E-53 2E-57 302.4 18.7 149 3-151 2-150 (150)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 4.4E-53 1.5E-57 308.2 18.2 150 1-151 1-150 (169)
5 2ayv_A Ubiquitin-conjugating e 100.0 1E-52 3.5E-57 305.4 20.1 148 3-150 19-166 (166)
6 2r0j_A Ubiquitin carrier prote 100.0 4.2E-53 1.4E-57 302.9 17.7 147 6-152 2-148 (149)
7 2aak_A UBC1, ubiquitin conjuga 100.0 7.6E-53 2.6E-57 302.4 18.9 151 1-152 1-151 (152)
8 1zdn_A Ubiquitin-conjugating e 100.0 3.7E-53 1.3E-57 305.8 16.8 145 6-150 14-158 (158)
9 2bep_A Ubiquitin-conjugating e 100.0 1.2E-52 3.9E-57 303.5 19.3 152 1-152 3-159 (159)
10 2c4o_A Ubiquitin-conjugating e 100.0 1.3E-52 4.4E-57 304.7 19.0 147 5-151 19-165 (165)
11 1yh2_A HSPC150 protein similar 100.0 1.8E-52 6E-57 305.2 19.4 150 3-152 2-155 (169)
12 1jat_A Ubiquitin-conjugating e 100.0 4.7E-53 1.6E-57 304.4 16.0 150 3-152 3-152 (155)
13 2e2c_A Ubiquitin conjugating e 100.0 3.2E-52 1.1E-56 300.3 18.9 148 4-152 8-155 (156)
14 1fxt_A Ubiquitin-conjugating e 100.0 1.1E-52 3.9E-57 300.6 15.6 146 6-151 2-149 (149)
15 2ucz_A UBC7, ubiquitin conjuga 100.0 3.4E-52 1.2E-56 302.7 17.9 150 1-151 1-164 (165)
16 3h8k_A Ubiquitin-conjugating e 100.0 1.3E-51 4.5E-56 299.4 19.5 148 4-151 2-163 (164)
17 3rcz_B SUMO-conjugating enzyme 100.0 6.6E-52 2.3E-56 300.4 17.6 149 3-151 8-163 (163)
18 2f4z_A Tgtwinscan_2721 - E2 do 100.0 8.8E-52 3E-56 306.6 18.5 149 3-151 30-192 (193)
19 2gjd_A Ubiquitin-conjugating e 100.0 1.1E-51 3.9E-56 297.7 17.3 150 1-151 1-157 (157)
20 3k9o_A Ubiquitin-conjugating e 100.0 2.5E-51 8.6E-56 306.6 19.4 151 1-152 2-156 (201)
21 3bzh_A Ubiquitin-conjugating e 100.0 1.9E-51 6.5E-56 305.2 18.3 147 5-151 48-194 (194)
22 2pwq_A Ubiquitin conjugating e 100.0 1.3E-51 4.3E-56 310.4 17.5 150 3-152 21-171 (216)
23 2grr_A Ubiquitin-conjugating e 100.0 2.6E-51 8.9E-56 296.9 16.5 148 5-152 7-161 (161)
24 1wzv_A Ubiquitin-conjugating e 100.0 4.4E-51 1.5E-55 294.1 17.2 147 5-152 4-152 (155)
25 3rz3_A Ubiquitin-conjugating e 100.0 2.6E-51 8.8E-56 302.4 16.3 151 1-151 3-173 (183)
26 1i7k_A Ubiquitin-conjugating e 100.0 3.5E-51 1.2E-55 300.3 16.4 149 3-152 28-176 (179)
27 3fn1_B NEDD8-conjugating enzym 100.0 3.3E-50 1.1E-54 292.8 18.2 147 4-151 13-167 (167)
28 1tte_A Ubiquitin-conjugating e 100.0 9.6E-51 3.3E-55 305.4 13.4 148 5-152 2-151 (215)
29 3e46_A Ubiquitin-conjugating e 100.0 7.6E-50 2.6E-54 306.7 18.5 148 5-152 57-208 (253)
30 2y9m_A Ubiquitin-conjugating e 100.0 1.8E-49 6.3E-54 289.9 18.2 152 1-152 1-169 (172)
31 1yrv_A Ubiquitin-conjugating l 100.0 8.5E-50 2.9E-54 290.8 14.7 143 5-148 23-168 (169)
32 2onu_A Ubiquitin-conjugating e 100.0 2.6E-50 8.9E-55 289.1 11.4 145 5-152 2-148 (152)
33 2awf_A Ubiquitin-conjugating e 100.0 2.2E-49 7.6E-54 289.4 15.7 144 2-145 14-172 (172)
34 2z5d_A Ubiquitin-conjugating e 100.0 1.1E-49 3.8E-54 292.1 12.5 147 1-151 20-169 (179)
35 1c4z_D UBCH7, ubiquitin conjug 100.0 1.1E-49 3.6E-54 286.6 11.2 146 6-152 3-150 (154)
36 1y8x_A Ubiquitin-conjugating e 100.0 2.5E-48 8.5E-53 280.9 17.3 143 3-148 4-147 (160)
37 1yf9_A Ubiquitin carrier prote 100.0 2.2E-48 7.5E-53 283.8 14.2 144 5-152 12-157 (171)
38 2nvu_C NEDD8-conjugating enzym 100.0 7.2E-48 2.5E-52 283.1 16.8 143 3-148 24-167 (180)
39 4ddg_A Ubiquitin-conjugating e 100.0 1.4E-47 4.6E-52 311.8 17.9 148 5-152 3-150 (399)
40 3o2u_A NEDD8-conjugating enzym 100.0 5.1E-47 1.7E-51 280.8 15.7 144 3-149 27-177 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 1.4E-45 4.8E-50 268.3 13.3 143 1-144 5-164 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 1.6E-43 5.4E-48 278.8 14.1 149 3-151 74-243 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 7.5E-44 2.6E-48 256.3 10.5 132 2-134 18-156 (156)
44 2fo3_A Ubiquitin-conjugating e 100.0 4.4E-43 1.5E-47 244.1 13.9 118 3-120 4-122 (125)
45 1jat_B Ubiquitin-conjugating e 100.0 8.3E-44 2.8E-48 251.6 7.4 130 1-131 2-138 (138)
46 2h2y_A Ubiquitin-conjugating e 100.0 4.8E-42 1.6E-46 242.0 15.9 117 3-119 18-135 (136)
47 2a4d_A Ubiquitin-conjugating e 100.0 2.7E-42 9.3E-47 248.8 12.3 125 4-128 24-156 (160)
48 2a7l_A Hypothetical ubiquitin- 100.0 3.9E-41 1.3E-45 237.1 13.1 110 6-115 23-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 1.2E-41 4.2E-46 247.8 9.6 125 4-128 34-166 (170)
50 2f4w_A Ubiquitin-conjugating e 100.0 2.6E-39 9.1E-44 238.8 15.8 135 3-139 12-152 (187)
51 1zuo_A Hypothetical protein LO 100.0 5.9E-40 2E-44 242.1 5.0 140 3-150 25-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 3.2E-29 1.1E-33 178.9 1.4 113 7-133 34-161 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.8E-20 9.5E-25 133.6 10.1 114 7-121 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 2.1E-20 7.2E-25 130.7 1.9 95 7-107 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 5.8E-15 2E-19 104.2 6.7 80 31-116 50-138 (146)
56 2ebm_A RWD domain-containing p 97.2 0.0049 1.7E-07 41.6 10.1 70 4-75 9-78 (128)
57 2day_A Ring finger protein 25; 96.6 0.016 5.4E-07 39.1 8.7 69 7-75 10-82 (128)
58 2yz0_A Serine/threonine-protei 96.6 0.025 8.6E-07 38.6 9.6 66 8-75 13-85 (138)
59 2daw_A RWD domain containing p 95.6 0.12 4.2E-06 36.0 9.3 23 53-75 76-98 (154)
60 3zqs_A E3 ubiquitin-protein li 95.4 0.17 5.9E-06 36.5 9.7 83 8-114 4-86 (186)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 95.1 0.2 6.7E-06 33.9 8.8 70 5-75 10-86 (137)
62 2ebk_A RWD domain-containing p 94.2 0.13 4.6E-06 34.4 6.2 68 6-74 8-78 (128)
63 2dax_A Protein C21ORF6; RWD do 90.9 0.19 6.6E-06 34.7 3.4 25 52-76 73-97 (152)
64 2cwb_A Chimera of immunoglobul 90.9 0.043 1.5E-06 36.3 0.0 36 116-151 20-55 (108)
65 3u3c_B Paxillin LD2 peptide; 4 77.8 1.5 5.1E-05 20.5 1.8 21 5-25 5-25 (26)
66 3rls_A YAF9, protein AF-9 homo 37.7 1.1E+02 0.0036 21.6 6.7 46 31-78 29-74 (175)
67 2rp4_A Transcription factor P5 37.6 66 0.0023 19.3 4.8 13 51-63 19-31 (76)
68 3s7v_A Major capsid protein VP 36.6 88 0.003 23.5 5.8 41 47-90 197-239 (277)
69 2cu9_A Spcia1, histone chapero 33.2 64 0.0022 22.4 4.4 38 33-70 36-86 (161)
70 1sid_A Polyomavirus coat prote 33.1 1E+02 0.0035 24.3 5.8 24 67-90 249-274 (383)
71 1vps_A Polyomavirus VP1 pentam 29.9 1.4E+02 0.0049 22.5 6.0 40 48-90 202-243 (289)
72 2bum_A Protocatechuate 3,4-dio 28.8 54 0.0018 23.7 3.6 26 49-74 108-138 (209)
73 3nxg_A Major capsid protein VP 28.8 1.1E+02 0.0039 22.9 5.3 43 45-90 186-230 (272)
74 1sva_1 Simian virus 40; virus 28.3 1.1E+02 0.0038 23.9 5.3 38 50-90 216-255 (361)
75 1zoq_C CREB-binding protein, i 26.5 54 0.0018 17.8 2.4 43 107-151 3-46 (47)
76 1roc_A Anti-silencing protein 25.7 1E+02 0.0036 21.2 4.3 35 33-67 37-84 (155)
77 4fmh_A VP1; viral capsid prote 25.2 1.5E+02 0.0053 22.4 5.5 44 44-90 202-247 (289)
78 1h3o_B Transcription initiatio 24.9 83 0.0028 19.0 3.3 42 110-151 11-52 (76)
79 1u9d_A Hypothetical protein VC 24.3 1.1E+02 0.0039 20.1 4.2 29 6-34 32-60 (122)
80 2c5k_P Vacuolar protein sortin 24.2 37 0.0013 16.1 1.3 12 8-19 13-24 (26)
81 2rf4_B DNA-directed RNA polyme 24.1 29 0.00099 21.6 1.2 12 6-17 63-74 (87)
82 3pft_A Flavin reductase; desul 23.0 40 0.0014 22.8 1.9 29 67-95 43-74 (157)
83 3iys_A Major capsid protein VP 22.4 1.7E+02 0.006 22.6 5.4 40 47-89 204-245 (343)
84 2hue_A Anti-silencing protein 21.5 1.6E+02 0.0055 20.7 4.7 37 33-69 42-91 (175)
85 2kru_A Light-independent proto 21.1 97 0.0033 18.0 3.0 28 124-151 7-34 (63)
86 3g9r_A Fusion complex of HIV-1 21.1 26 0.00089 18.4 0.4 15 5-19 28-42 (42)
87 2idc_A Anti-silencing protein 20.4 1.5E+02 0.0051 20.9 4.4 35 33-67 38-85 (179)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.9e-54 Score=310.43 Aligned_cols=150 Identities=48% Similarity=0.882 Sum_probs=146.4
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
++.+.|||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.||+++|++|+++|.++||+|+++||+|
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 82 NKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986
No 2
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-53 Score=307.42 Aligned_cols=150 Identities=79% Similarity=1.331 Sum_probs=143.8
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
|.++.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 3 s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (154)
T 2c2v_B 3 SAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 82 (154)
T ss_dssp SCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcC
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.||+++|++|+++|.++||+|+++||++
T Consensus 83 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp CTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974
No 3
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=5.9e-53 Score=302.41 Aligned_cols=149 Identities=49% Similarity=0.861 Sum_probs=145.3
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
|..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
+.+|.||++++.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999995
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-53 Score=308.19 Aligned_cols=150 Identities=39% Similarity=0.765 Sum_probs=145.1
Q ss_pred CCCCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceec
Q 031783 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (153)
Q Consensus 1 ma~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hp 80 (153)
|++ .+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||
T Consensus 1 Ms~-~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 79 (169)
T 1ayz_A 1 MST-PARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP 79 (169)
T ss_dssp -CC-HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccC
Confidence 543 5679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 81 NIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 81 nv~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
||+.+|.||+++|.+.|+|+++|++||.+|+++|.+|++++|+|.+|+++|++++++|.++||+|+++||+
T Consensus 80 NI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 80 NVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995
No 5
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1e-52 Score=305.42 Aligned_cols=148 Identities=51% Similarity=0.892 Sum_probs=144.4
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
++.+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 19 FQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 34577999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhc
Q 031783 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 150 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a 150 (153)
+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||
T Consensus 99 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 99 NSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998
No 6
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.2e-53 Score=302.87 Aligned_cols=147 Identities=68% Similarity=1.198 Sum_probs=143.9
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCC
Q 031783 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 85 (153)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~ 85 (153)
+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 86 G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999975
No 7
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=7.6e-53 Score=302.44 Aligned_cols=151 Identities=36% Similarity=0.769 Sum_probs=145.6
Q ss_pred CCCCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceec
Q 031783 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (153)
Q Consensus 1 ma~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hp 80 (153)
|++ .+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 Ms~-~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (152)
T 2aak_A 1 MST-PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79 (152)
T ss_dssp CCC-HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccC
Confidence 543 5679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 81 NIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 81 nv~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
||+.+|.||++++.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+.
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp TBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999963
No 8
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-53 Score=305.78 Aligned_cols=145 Identities=38% Similarity=0.727 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCC
Q 031783 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 85 (153)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~ 85 (153)
+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhc
Q 031783 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 150 (153)
Q Consensus 86 G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a 150 (153)
|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.||+++|++|+++|.++||+||++||
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998
No 9
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.2e-52 Score=303.52 Aligned_cols=152 Identities=45% Similarity=0.810 Sum_probs=144.9
Q ss_pred CCCCC-hHHHHHHHHHHHhhC---CCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecc
Q 031783 1 MANSN-LPRRIIKETQRLLSE---PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (153)
Q Consensus 1 ma~~~-~~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~ 76 (153)
|+|++ +.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 3 ~~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 82 (159)
T 2bep_A 3 MAMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 82 (159)
T ss_dssp -CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCC
Confidence 66664 679999999999985 57899999999999999999999999999999999999999999999999999999
Q ss_pred ceecceeC-CCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 77 IYHPNIDK-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 77 i~Hpnv~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+|||||+. +|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 83 i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 83 IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 99999995 99999999999999999999999999999999999999999999999999999999999999999975
No 10
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.3e-52 Score=304.71 Aligned_cols=147 Identities=50% Similarity=0.876 Sum_probs=144.0
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeC
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~ 84 (153)
.+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 85 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|.+|+++|.++||+|+++||+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999995
No 11
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-52 Score=305.20 Aligned_cols=150 Identities=48% Similarity=0.873 Sum_probs=146.2
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
|+++.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCC----CCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 83 DKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 83 ~~~G~icl~~l~----~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+.+|.||++++. ++|+|+++|++||.+|+++|.+|++++|+|.+|+++|.+|+++|.++||+|+++||++
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 999999999998 8999999999999999999999999999999999999999999999999999999975
No 12
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=4.7e-53 Score=304.43 Aligned_cols=150 Identities=67% Similarity=1.229 Sum_probs=145.5
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 3 ~~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 3 AASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CCSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 83 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 83 DRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp CTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999964
No 13
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-52 Score=300.32 Aligned_cols=148 Identities=38% Similarity=0.698 Sum_probs=143.6
Q ss_pred CChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceeccee
Q 031783 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (153)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~ 83 (153)
..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 87 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVD 87 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCc
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 84 KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 84 ~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.||+++| +|+++|.++||+|+++||..
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 88 QSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred cCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999 89999999999999999853
No 14
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.1e-52 Score=300.62 Aligned_cols=146 Identities=43% Similarity=0.834 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCC-CCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeC
Q 031783 6 LPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~ 84 (153)
+.+||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 469999999999999999999999877 9999999999999999999999999999999999999999999999999998
Q ss_pred -CCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 85 -LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
+|.||++++.++|+|++++++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999995
No 15
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-52 Score=302.71 Aligned_cols=150 Identities=33% Similarity=0.688 Sum_probs=143.5
Q ss_pred CCCCChHHHHHHHHHHHhhCCCCCeEEEeCC-CCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecccee
Q 031783 1 MANSNLPRRIIKETQRLLSEPAPGISASPSE-DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (153)
Q Consensus 1 ma~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~H 79 (153)
||+ .+.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||
T Consensus 1 M~~-~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MSK-TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -CH-HHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 665 577999999999999999999999865 799999999999999999999999999999999999999999999999
Q ss_pred cceeCCCceeeccC-------------CCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHH
Q 031783 80 PNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWT 146 (153)
Q Consensus 80 pnv~~~G~icl~~l-------------~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~ 146 (153)
|||+.+|.||+++| .++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~ 159 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSI 159 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHH
Confidence 99999999999999 68999999999999999999999999999999999999999999999999999
Q ss_pred HHhcC
Q 031783 147 RLYAS 151 (153)
Q Consensus 147 ~~~a~ 151 (153)
++++.
T Consensus 160 ~~~~~ 164 (165)
T 2ucz_A 160 LKSLG 164 (165)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99974
No 16
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.3e-51 Score=299.38 Aligned_cols=148 Identities=31% Similarity=0.659 Sum_probs=142.9
Q ss_pred CChHHHHHHHHHHHhhCCCCCeEEEeCCC-CCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 4 SNLPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
+++.|||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 45789999999999999999999998765 99999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHh
Q 031783 83 DKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLY 149 (153)
Q Consensus 83 ~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~ 149 (153)
+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s 161 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 161 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999996 7899999999999999999999999999999999999999999999999999999
Q ss_pred cC
Q 031783 150 AS 151 (153)
Q Consensus 150 a~ 151 (153)
+.
T Consensus 162 ~~ 163 (164)
T 3h8k_A 162 LG 163 (164)
T ss_dssp HT
T ss_pred hc
Confidence 75
No 17
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=6.6e-52 Score=300.37 Aligned_cols=149 Identities=32% Similarity=0.614 Sum_probs=142.9
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCC-----CCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccc
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i 77 (153)
|.++.+||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 556889999999999999999999999765 999999999999999999999999999999999999999999999
Q ss_pred eecceeCCCceeeccCCC--CCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 78 YHPNIDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 78 ~Hpnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
|||||+.+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999999999999975 59999999999999999999999999999999999999999999999999999984
No 18
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=8.8e-52 Score=306.61 Aligned_cols=149 Identities=44% Similarity=0.784 Sum_probs=140.6
Q ss_pred CCChHHHHHHHHHHHhhCCC-------------CCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCC
Q 031783 3 NSNLPRRIIKETQRLLSEPA-------------PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAP 69 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~-------------~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP 69 (153)
+..+.+||++|+++|+++++ .|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||
T Consensus 30 ~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP 109 (193)
T 2f4z_A 30 TPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPP 109 (193)
T ss_dssp --CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCC
Confidence 34467999999999999876 79999999999999999999999999999999999999999999999
Q ss_pred eeEEeccceeccee-CCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHH
Q 031783 70 KVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 148 (153)
Q Consensus 70 ~v~f~~~i~Hpnv~-~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~ 148 (153)
+|+|.|+||||||+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++
T Consensus 110 ~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ 189 (193)
T 2f4z_A 110 KMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTET 189 (193)
T ss_dssp EEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred eEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999999999 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcC
Q 031783 149 YAS 151 (153)
Q Consensus 149 ~a~ 151 (153)
||+
T Consensus 190 ya~ 192 (193)
T 2f4z_A 190 FAK 192 (193)
T ss_dssp HCC
T ss_pred Hcc
Confidence 996
No 19
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.1e-51 Score=297.72 Aligned_cols=150 Identities=30% Similarity=0.603 Sum_probs=142.3
Q ss_pred CCCCChHHHHHHHHHHHhhCCCCCeEEEeCC-----CCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEec
Q 031783 1 MANSNLPRRIIKETQRLLSEPAPGISASPSE-----DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (153)
Q Consensus 1 ma~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~ 75 (153)
|++ .+.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms~-~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MSS-LCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp --C-HHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 543 567999999999999999999998864 48999999999999999999999999999999999999999999
Q ss_pred cceecceeCCCceeeccCCC--CCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 76 KIYHPNIDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 76 ~i~Hpnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
++|||||+.+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999986 79999999999999999999999999999999999999999999999999999996
No 20
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=2.5e-51 Score=306.57 Aligned_cols=151 Identities=46% Similarity=0.811 Sum_probs=143.3
Q ss_pred CCCCChHHHHHHHHHHHhhC---CCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccc
Q 031783 1 MANSNLPRRIIKETQRLLSE---PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77 (153)
Q Consensus 1 ma~~~~~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i 77 (153)
||+ .+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 2 Ms~-~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 80 (201)
T 3k9o_A 2 MAN-IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 80 (201)
T ss_dssp --C-TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred CcH-HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCc
Confidence 554 4569999999999987 368999999999999999999999999999999999999999999999999999999
Q ss_pred eecceeC-CCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 78 YHPNIDK-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 78 ~Hpnv~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
|||||+. +|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 81 ~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 81 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999995 99999999999999999999999999999999999999999999999999999999999999999975
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.9e-51 Score=305.18 Aligned_cols=147 Identities=50% Similarity=0.826 Sum_probs=144.0
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeC
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~ 84 (153)
.+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.+++|||||+.
T Consensus 48 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 127 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS 127 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 85 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|.+|+++|.++||+|+++||+
T Consensus 128 ~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 128 QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999995
No 22
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.3e-51 Score=310.40 Aligned_cols=150 Identities=48% Similarity=0.825 Sum_probs=145.2
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
++.+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 100 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNI 100 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCC
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 83 D-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 83 ~-~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+ .+|.||+++|.+.|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 101 ~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 101 SSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp CTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9 589999999999999999999999999999999999999999999999999999999999999999974
No 23
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2.6e-51 Score=296.93 Aligned_cols=148 Identities=30% Similarity=0.611 Sum_probs=141.6
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCC-----CCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecccee
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSE-----DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~H 79 (153)
.+.+||++|+++|++++++|+.+.+.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.+++||
T Consensus 7 ~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 86 (161)
T 2grr_A 7 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFH 86 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCccc
Confidence 467999999999999999999998853 689999999999999999999999999999999999999999999999
Q ss_pred cceeCCCceeeccCCC--CCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 80 PNIDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 80 pnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
|||+.+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+||++||++
T Consensus 87 Pnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 87 PNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp TTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999975 899999999999999999999999999999999999999999999999999999974
No 24
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=4.4e-51 Score=294.12 Aligned_cols=147 Identities=33% Similarity=0.645 Sum_probs=142.5
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEE-EeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceeccee
Q 031783 5 NLPRRIIKETQRLLSEPAPGISA-SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~-~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~ 83 (153)
.+.+||++|+++|++++++|+++ .++++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 46799999999999999999999 788999999999999 9999999999999999999999999999999999999999
Q ss_pred CCCceeeccC-CCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 84 KLGRICLDIL-KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 84 ~~G~icl~~l-~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
.+|.||+++| .++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999 89999999999999999999999999999999999999999999999999999999964
No 25
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.6e-51 Score=302.41 Aligned_cols=151 Identities=32% Similarity=0.644 Sum_probs=143.6
Q ss_pred CCCCChHHHHHHHHHHHhhCCCCCeEEE-eCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecccee
Q 031783 1 MANSNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (153)
Q Consensus 1 ma~~~~~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~H 79 (153)
||++++.|||++|+++|+++++.|+++. ++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 8888999999999999999999999999 678899999999999999999999999999999999999999999999999
Q ss_pred cceeCCCceeeccCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhh------CHHHHHH
Q 031783 80 PNIDKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT------NEAEAVE 140 (153)
Q Consensus 80 pnv~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~------~~~~f~~ 140 (153)
|||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.||+++|++ ++++|.+
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~ 162 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTD 162 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHH
Confidence 999999999999996 889999999999999999999999999999999999998 7889999
Q ss_pred HHHHHHHHhcC
Q 031783 141 TAKEWTRLYAS 151 (153)
Q Consensus 141 ~a~~~~~~~a~ 151 (153)
+|++++++++.
T Consensus 163 ~v~~~v~~s~~ 173 (183)
T 3rz3_A 163 IIRKQVLGTKV 173 (183)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 26
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-51 Score=300.33 Aligned_cols=149 Identities=40% Similarity=0.624 Sum_probs=143.1
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 107 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNV 107 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTB
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+.+|.||+++|.+.|+|+++|++||.+|+++|.+|++++|+|.+|+++| +|+++|.++|++++++++.+
T Consensus 108 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 108 DTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred ccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999 99999999999999999864
No 27
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3.3e-50 Score=292.80 Aligned_cols=147 Identities=29% Similarity=0.590 Sum_probs=140.6
Q ss_pred CChHHHHHHHHHHHhhCCCCCeEEEe-CCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 4 SNLPRRIIKETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~-~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
+.+.|||++|+++|++++++|+++.+ .++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 44779999999999999999999985 568899999998 8999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCC------CCCCcCCHHHHHHHHHHhhcC-CCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 83 DKLGRICLDILKD------KWSPALQIRTVLLSIQALLSA-PNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 83 ~~~G~icl~~l~~------~W~p~~~i~~il~~i~~ll~~-p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
+.+|.||+++|.. +|+|+++|++||.+|+++|.+ |++++|+|.||+++|++|+++|.++||+|+++||+
T Consensus 92 ~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 92 TETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999975 799999999999999999999 69999999999999999999999999999999996
No 28
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=9.6e-51 Score=305.41 Aligned_cols=148 Identities=42% Similarity=0.822 Sum_probs=142.8
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCCC-CCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceeccee
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~ 83 (153)
++.+||++|+++|++++++|+++.+.++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 4679999999999999999999999766 567999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 84 K-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 84 ~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
. +|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|.+|++.|.++||+|+++||++
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 8 99999999999999999999999999999999999999999999999999999999999999999964
No 29
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=7.6e-50 Score=306.69 Aligned_cols=148 Identities=45% Similarity=0.804 Sum_probs=142.9
Q ss_pred ChHHHHHHHHHHHhhC---CCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecc
Q 031783 5 NLPRRIIKETQRLLSE---PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPN 81 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpn 81 (153)
.+.+||++||++|+++ ++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 57 ~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 136 (253)
T 3e46_A 57 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 136 (253)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCC
Confidence 3679999999999987 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred eeC-CCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 82 IDK-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 82 v~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
|+. +|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.||+++|.+|+++|.++||+|+++||++
T Consensus 137 V~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 137 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp BCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 995 99999999999999999999999999999999999999999999999999999999999999999974
No 30
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.8e-49 Score=289.93 Aligned_cols=152 Identities=28% Similarity=0.506 Sum_probs=139.1
Q ss_pred CCCCC-hHHHHHHHHHHHhh-C-C------CC---CeEEEe-CCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCC
Q 031783 1 MANSN-LPRRIIKETQRLLS-E-P------AP---GISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67 (153)
Q Consensus 1 ma~~~-~~~Rl~~E~~~l~~-~-~------~~---~~~~~~-~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~ 67 (153)
|||++ +.+||++|+++|++ . + +. ++.+.+ +++|+++|+++|.||++|||+||.|+++|.||++||++
T Consensus 1 ~~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~ 80 (172)
T 2y9m_A 1 GAMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMN 80 (172)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCC
Confidence 67765 67999999999998 4 3 33 467778 78899999999999999999999999999999999999
Q ss_pred CCeeEEec-cceeccee-CCCceeeccCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhh-CHHHHHHHHH
Q 031783 68 APKVRFLT-KIYHPNID-KLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT-NEAEAVETAK 143 (153)
Q Consensus 68 pP~v~f~~-~i~Hpnv~-~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~-~~~~f~~~a~ 143 (153)
||+|+|.| ++|||||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.||+++|++ |+++|.++||
T Consensus 81 PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~ 160 (172)
T 2y9m_A 81 PPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVK 160 (172)
T ss_dssp CCEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHH
T ss_pred CCEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHH
Confidence 99999999 99999997 79999999998 899999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHhcCC
Q 031783 144 EWTRLYASG 152 (153)
Q Consensus 144 ~~~~~~a~~ 152 (153)
+|+++++.-
T Consensus 161 ~~~~~~~~~ 169 (172)
T 2y9m_A 161 YFLAERERI 169 (172)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhh
Confidence 999999753
No 31
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.5e-50 Score=290.75 Aligned_cols=143 Identities=27% Similarity=0.482 Sum_probs=137.6
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce-e
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI-D 83 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv-~ 83 (153)
.+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||| +
T Consensus 23 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 102 (169)
T 1yrv_A 23 RAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDP 102 (169)
T ss_dssp HHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccC
Confidence 467999999999999999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCceeeccCC--CCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHH
Q 031783 84 KLGRICLDILK--DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 148 (153)
Q Consensus 84 ~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~ 148 (153)
.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.||+++|++|+++|.++ ++++++
T Consensus 103 ~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 103 HTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp TTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 89999999998 89999999999999999999999999999999999999999999998 888764
No 32
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.6e-50 Score=289.13 Aligned_cols=145 Identities=33% Similarity=0.691 Sum_probs=138.1
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeC
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~ 84 (153)
++.|||++|+++|++. |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 4568999999999873 7889999999999999999999999999999999999999999999999999999999995
Q ss_pred -CCceeeccCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 85 -LGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+|.||++++.++|+|++++++||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999 6899999999999999999999999999999999999999974
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.2e-49 Score=289.42 Aligned_cols=144 Identities=33% Similarity=0.716 Sum_probs=110.8
Q ss_pred CCCChHHHHHHHHHHHhhCCCCCeEEEeCC-CCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceec
Q 031783 2 ANSNLPRRIIKETQRLLSEPAPGISASPSE-DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (153)
Q Consensus 2 a~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hp 80 (153)
++..+.|||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HP 93 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHP 93 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccC
Confidence 356688999999999999999999999865 7999999999999999999999999999999999999999999999999
Q ss_pred ceeCCCceeeccCC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHH-HHHHHHHHH
Q 031783 81 NIDKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEA-EAVETAKEW 145 (153)
Q Consensus 81 nv~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~-~f~~~a~~~ 145 (153)
||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.||+++|++|++ +|.++||+|
T Consensus 94 NV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 94 NVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999999996 689999999999999999999999999999999999999999 999999986
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=292.09 Aligned_cols=147 Identities=33% Similarity=0.674 Sum_probs=137.5
Q ss_pred CCCC-ChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecccee
Q 031783 1 MANS-NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (153)
Q Consensus 1 ma~~-~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~H 79 (153)
|++. ++.|||++|+++|+. +|+++.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~H 95 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFH 95 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCcc
Confidence 4443 367999999999985 57888887 678999999999999999999999999999999999999999999999
Q ss_pred cceeC-CCceeeccCCCCCCCcCCHHHHHHH-HHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 80 PNIDK-LGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 80 pnv~~-~G~icl~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
|||+. +|.||+++|.++|+|+++|++||.+ |+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 96 PNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 96 PNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99998 9999999999999999999999999 999999999999999999999999999999999999999996
No 35
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.1e-49 Score=286.63 Aligned_cols=146 Identities=33% Similarity=0.714 Sum_probs=137.2
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEE-eCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeC
Q 031783 6 LPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~ 84 (153)
+.+||++|+++|++++++|+.+. +.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 45899999999999999999855 47889999999998 99999999999999999999999999999999999999999
Q ss_pred CCceeeccCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 85 LGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 85 ~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+|.||+++|. ++|+|++++++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 82 ~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 82 KGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp TCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 9999999996 8999999999999999999999999999999999999999999999999999999964
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-48 Score=280.95 Aligned_cols=143 Identities=31% Similarity=0.579 Sum_probs=136.8
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEE-eCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecc
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPN 81 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpn 81 (153)
++.+.+||++|+++| ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 80 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCc
Confidence 345789999999999 567899998 7899999999998 999999999999999999999999999999999999999
Q ss_pred eeCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHH
Q 031783 82 IDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 148 (153)
Q Consensus 82 v~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~ 148 (153)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++|++|++.
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 81 IDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999874
No 37
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-48 Score=283.78 Aligned_cols=144 Identities=30% Similarity=0.572 Sum_probs=135.5
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeC
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~ 84 (153)
++.+||++|+++|++++. ++ +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 567999999999999874 44 35789999999999999999999999999999999999999999999999999995
Q ss_pred -CCceeeccCCCCCCCcCCHHHHHHHH-HHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 85 -LGRICLDILKDKWSPALQIRTVLLSI-QALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~i-~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+|.||+++|.++|+|+++|++||.+| ++||.+|++++|+|.+|+++|.+|+++|.++||+|+++||++
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 99999999999999999999999997 799999999999999999999999999999999999999963
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.2e-48 Score=283.12 Aligned_cols=143 Identities=31% Similarity=0.554 Sum_probs=136.9
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEE-eCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecc
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPN 81 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpn 81 (153)
++.+.+||++|+++| ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 345779999999999 577899998 7899999999998 999999999999999999999999999999999999999
Q ss_pred eeCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHH
Q 031783 82 IDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 148 (153)
Q Consensus 82 v~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~ 148 (153)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++|++|++.
T Consensus 101 V~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 101 IDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp BCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999874
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.4e-47 Score=311.79 Aligned_cols=148 Identities=49% Similarity=0.859 Sum_probs=145.0
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeC
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~ 84 (153)
.+.|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcCC
Q 031783 85 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 152 (153)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~~ 152 (153)
+|.||++++.++|+|++++++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999975
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=5.1e-47 Score=280.75 Aligned_cols=144 Identities=32% Similarity=0.568 Sum_probs=137.5
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEE----eCCCCCc---EEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEec
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISAS----PSEDNMR---YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~----~~~~~~~---~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~ 75 (153)
++++.+||++|+++|+ +++|+++. ++++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|
T Consensus 27 ~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 103 (190)
T 3o2u_A 27 LSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLK 103 (190)
T ss_dssp CCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECS
T ss_pred ccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEec
Confidence 4557899999999998 67899998 8899999 9999997 88899999999999999999999999999999
Q ss_pred cceecceeCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHh
Q 031783 76 KIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLY 149 (153)
Q Consensus 76 ~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~ 149 (153)
++|||||+.+|.||++++.++|+|+++|++||.+|+++|.+|++++|+|.||+++|.+|+++|.++||+|++.+
T Consensus 104 ~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 104 KIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp CCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred CcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999754
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.4e-45 Score=268.32 Aligned_cols=143 Identities=25% Similarity=0.481 Sum_probs=132.7
Q ss_pred CCCCChHHHHHHHHHHHhhCC------------CCCeEEEeCCCCCcEEEEEEECCCCCCCC--CcEEEEEEEcCCCCCC
Q 031783 1 MANSNLPRRIIKETQRLLSEP------------APGISASPSEDNMRYFNVMILGPTQSPYE--GGVFKLELFLPEEYPM 66 (153)
Q Consensus 1 ma~~~~~~Rl~~E~~~l~~~~------------~~~~~~~~~~~~~~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~YP~ 66 (153)
|++ .+.|||++|+++|++++ +.|+.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||+
T Consensus 5 Ms~-~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 5 MKN-ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp CCC-CCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred ccH-HHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 544 46799999999999876 67999999999999999999999999999 9999999999999999
Q ss_pred CCCeeEEeccceecceeCCCceeeccCCCCCCCcCCHHHHH-HHHHHhhcC--CCCCCcccHHHHHHHhhCHHHHHHHHH
Q 031783 67 AAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVL-LSIQALLSA--PNPDDPLSENIAKHWKTNEAEAVETAK 143 (153)
Q Consensus 67 ~pP~v~f~~~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~il-~~i~~ll~~--p~~~~~~n~ea~~~~~~~~~~f~~~a~ 143 (153)
+||+|+|.|++|||||+.+|.||++++.++|+|+++++++| ..|++++.+ |++++|+|.||+++|++|+++|.++||
T Consensus 84 ~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 84 EPPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp SCCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred CCCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 99999999999999999999999999999999999999975 467777775 899999999999999999999999998
Q ss_pred H
Q 031783 144 E 144 (153)
Q Consensus 144 ~ 144 (153)
+
T Consensus 164 r 164 (167)
T 4ds2_A 164 R 164 (167)
T ss_dssp T
T ss_pred h
Confidence 3
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=278.76 Aligned_cols=149 Identities=27% Similarity=0.536 Sum_probs=138.0
Q ss_pred CCChHHHHHHHHHHHhhCCCC----CeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecc--
Q 031783 3 NSNLPRRIIKETQRLLSEPAP----GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK-- 76 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~----~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~-- 76 (153)
+..+.+||++|+++|++++++ ++.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 74 s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g 153 (323)
T 3ceg_A 74 SAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGG 153 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTT
T ss_pred CHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCC
Confidence 345789999999999988776 45677889999999999999999999999999999999999999999999998
Q ss_pred ---ceecceeCCCceeeccCC-------CCCCCcC-CHHHHHHHHHHhhc--CCCCCCcccHHH--HHHHhhCHHHHHHH
Q 031783 77 ---IYHPNIDKLGRICLDILK-------DKWSPAL-QIRTVLLSIQALLS--APNPDDPLSENI--AKHWKTNEAEAVET 141 (153)
Q Consensus 77 ---i~Hpnv~~~G~icl~~l~-------~~W~p~~-~i~~il~~i~~ll~--~p~~~~~~n~ea--~~~~~~~~~~f~~~ 141 (153)
+|||||+.+|.||+++|. ++|+|++ +|++||.+|++||. +|++++|+|.++ +.+|.+|++.|.++
T Consensus 154 ~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~ 233 (323)
T 3ceg_A 154 HSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGN 233 (323)
T ss_dssp TTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHH
T ss_pred CcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHH
Confidence 999999999999999996 6899999 89999999999996 677799999987 57899999999999
Q ss_pred HHHHHHHhcC
Q 031783 142 AKEWTRLYAS 151 (153)
Q Consensus 142 a~~~~~~~a~ 151 (153)
|++|+++||+
T Consensus 234 vr~~t~k~A~ 243 (323)
T 3ceg_A 234 IRQATVKWAM 243 (323)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999999996
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=7.5e-44 Score=256.26 Aligned_cols=132 Identities=25% Similarity=0.441 Sum_probs=120.9
Q ss_pred CCCChHHHHHHHHHHHhhC-CCCCeEEEeCC-C--CCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccc
Q 031783 2 ANSNLPRRIIKETQRLLSE-PAPGISASPSE-D--NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77 (153)
Q Consensus 2 a~~~~~~Rl~~E~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i 77 (153)
++.++.+||++|+++|+++ +++|+++.+.. + |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i 97 (156)
T 2q0v_A 18 GIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKI 97 (156)
T ss_dssp SCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred ccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccc
Confidence 4567889999999999998 78899998843 3 599999999999999999999999999999999999999999999
Q ss_pred eecceeCCCce---eeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhC
Q 031783 78 YHPNIDKLGRI---CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN 134 (153)
Q Consensus 78 ~Hpnv~~~G~i---cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~ 134 (153)
|||||+.+|.| |++++. +|+|+++|++||.+|+++|.+|++++|+|.+|+++|.+|
T Consensus 98 ~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 98 EMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred ccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999999 888887 599999999999999999999999999999999988765
No 44
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-43 Score=244.12 Aligned_cols=118 Identities=32% Similarity=0.586 Sum_probs=106.4
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccc-eecc
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPN 81 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i-~Hpn 81 (153)
|+++.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 4 m~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp -----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 556779999999999999999999999999999999999999999999999999999999999999999999996 9999
Q ss_pred eeCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCCC
Q 031783 82 IDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120 (153)
Q Consensus 82 v~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~ 120 (153)
|+.+|.||++++.++|+|++++++||.+|+++|.+|+.+
T Consensus 84 v~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 84 VYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp BCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999999998865
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=8.3e-44 Score=251.63 Aligned_cols=130 Identities=24% Similarity=0.419 Sum_probs=117.6
Q ss_pred CCCCChHHHHHHHHHHHhhC-CCCCeEEEeCC-C--CCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecc
Q 031783 1 MANSNLPRRIIKETQRLLSE-PAPGISASPSE-D--NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (153)
Q Consensus 1 ma~~~~~~Rl~~E~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~ 76 (153)
|+..++.+||++|+++|+++ ++.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 78888899999999999998 78899998843 3 59999999999999999999999999999999999999999999
Q ss_pred ceecceeCC-Cce--eeccCCCCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHH
Q 031783 77 IYHPNIDKL-GRI--CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHW 131 (153)
Q Consensus 77 i~Hpnv~~~-G~i--cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~ 131 (153)
+|||||+.+ |.| |++++. +|+|++++++||.+|+++|.+|++++|+|.+|+.+|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999985 999 898876 899999999999999999999999999999887644
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.8e-42 Score=241.99 Aligned_cols=117 Identities=32% Similarity=0.576 Sum_probs=112.5
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccc-eecc
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPN 81 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i-~Hpn 81 (153)
++++.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 446789999999999999999999999999999999999999999999999999999999999999999999996 9999
Q ss_pred eeCCCceeeccCCCCCCCcCCHHHHHHHHHHhhcCCCC
Q 031783 82 IDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119 (153)
Q Consensus 82 v~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~ 119 (153)
|+.+|.||+++|.++|+|++++++||.+|+++|.+|+.
T Consensus 98 v~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 98 VYSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp BCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 99999999999999999999999999999999999874
No 47
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.7e-42 Score=248.77 Aligned_cols=125 Identities=24% Similarity=0.402 Sum_probs=116.2
Q ss_pred CChHHHHHHHHHHHhhCCCCC-eEEEe-CCCC--CcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecccee
Q 031783 4 SNLPRRIIKETQRLLSEPAPG-ISASP-SEDN--MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (153)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~-~~~~~-~~~~--~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~H 79 (153)
.++.+||++|+++|++++++| +.+.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 346789999999999998888 77877 4554 8999999999999999999999999999999999999999999999
Q ss_pred ccee-CCCceeeccCC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCcccHHHH
Q 031783 80 PNID-KLGRICLDILK--DKWSPALQIRTVLLSIQALLS-APNPDDPLSENIA 128 (153)
Q Consensus 80 pnv~-~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~-~p~~~~~~n~ea~ 128 (153)
|||+ .+|.||++++. ++|+|+++|++||.+|+++|. +|++++|+|.||+
T Consensus 104 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp TTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred CCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 9999 69999999997 899999999999999999995 6999999999987
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-41 Score=237.12 Aligned_cols=110 Identities=35% Similarity=0.674 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEE--eCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccce--ecc
Q 031783 6 LPRRIIKETQRLLSEPAPGISAS--PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY--HPN 81 (153)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~--~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~--Hpn 81 (153)
..+||++|+++|++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.+++| |||
T Consensus 23 ~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPN 102 (136)
T 2a7l_A 23 MQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPH 102 (136)
T ss_dssp SCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCcc
Confidence 34999999999999999999965 78899999999999999999999999999999999999999999999999 999
Q ss_pred eeCCCceeeccCCCCCCCcCCHHHHHHHHHHhhc
Q 031783 82 IDKLGRICLDILKDKWSPALQIRTVLLSIQALLS 115 (153)
Q Consensus 82 v~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~ 115 (153)
|+.+|+||+++|.++|+|+++|++||.+|+++|.
T Consensus 103 V~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 103 VYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999974
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=247.76 Aligned_cols=125 Identities=24% Similarity=0.406 Sum_probs=116.3
Q ss_pred CChHHHHHHHHHHHhhCCCCC-eEEEe-CCCC--CcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecccee
Q 031783 4 SNLPRRIIKETQRLLSEPAPG-ISASP-SEDN--MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (153)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~-~~~~~-~~~~--~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~H 79 (153)
.++.+||++|+++|++++++| +.+.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 457899999999999998888 67776 4554 9999999999999999999999999999999999999999999999
Q ss_pred ccee-CCCceeeccCC--CCCCCcCCHHHHHHHHHHhhcC-CCCCCcccHHHH
Q 031783 80 PNID-KLGRICLDILK--DKWSPALQIRTVLLSIQALLSA-PNPDDPLSENIA 128 (153)
Q Consensus 80 pnv~-~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~~-p~~~~~~n~ea~ 128 (153)
|||+ .+|.||++++. ++|+|+++|++||.+|+++|.+ |++++|+|.||+
T Consensus 114 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 9999 79999999997 8999999999999999999974 999999999986
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-39 Score=238.83 Aligned_cols=135 Identities=24% Similarity=0.519 Sum_probs=111.7
Q ss_pred CCChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecce
Q 031783 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.++ ||+|
T Consensus 12 ~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~ 89 (187)
T 2f4w_A 12 PTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRF 89 (187)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSB
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Ccee
Confidence 34577999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred eCCCceeeccC---CCCCCCcCCHHHHHHHHHHhhcCCCCCCc---ccHHHHHHHhhCHHHHH
Q 031783 83 DKLGRICLDIL---KDKWSPALQIRTVLLSIQALLSAPNPDDP---LSENIAKHWKTNEAEAV 139 (153)
Q Consensus 83 ~~~G~icl~~l---~~~W~p~~~i~~il~~i~~ll~~p~~~~~---~n~ea~~~~~~~~~~f~ 139 (153)
+.+|.||++++ .++|+|+++|.+||.+|+++|.+|+++.. .+.+..+.|..+...|+
T Consensus 90 ~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~ 152 (187)
T 2f4w_A 90 KCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFN 152 (187)
T ss_dssp CTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHH
T ss_pred ccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHHHHh
Confidence 99999999999 68999999999999999999999998743 23333444444444333
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=5.9e-40 Score=242.07 Aligned_cols=140 Identities=18% Similarity=0.303 Sum_probs=123.6
Q ss_pred CCChHHHHHHHHHHHhhCC---CCCeEEEeCCCCCcEEEEEEECC-CCCCCCC-----------cEEEEEEEcCCCCCCC
Q 031783 3 NSNLPRRIIKETQRLLSEP---APGISASPSEDNMRYFNVMILGP-TQSPYEG-----------GVFKLELFLPEEYPMA 67 (153)
Q Consensus 3 ~~~~~~Rl~~E~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~Gp-~~tpyeg-----------g~f~~~i~fp~~YP~~ 67 (153)
+.++.+||++|+++|++++ +.++++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~ 104 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFD 104 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCC
Confidence 3456799999999999987 68899999999999999999997 9999998 8999999999999999
Q ss_pred CCeeEEeccceec-ceeCCCceeeccCC-CCCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHH
Q 031783 68 APKVRFLTKIYHP-NIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEW 145 (153)
Q Consensus 68 pP~v~f~~~i~Hp-nv~~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~ 145 (153)
||+|+|.+++||| ||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|+... .|..++.+|.+++++.
T Consensus 105 PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~ 176 (186)
T 1zuo_A 105 PPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQ 176 (186)
T ss_dssp CCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHH
T ss_pred CCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHH
Confidence 9999999999999 69999999999996 799999999999999999999886542 3444566777777776
Q ss_pred HHHhc
Q 031783 146 TRLYA 150 (153)
Q Consensus 146 ~~~~a 150 (153)
+.+.+
T Consensus 177 ~~~~~ 181 (186)
T 1zuo_A 177 SYNSI 181 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=3.2e-29 Score=178.89 Aligned_cols=113 Identities=17% Similarity=0.227 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCc----------EEEEEEEcCCCCCCCCCeeEEecc
Q 031783 7 PRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGG----------VFKLELFLPEEYPMAAPKVRFLTK 76 (153)
Q Consensus 7 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v~f~~~ 76 (153)
.+||++|+++|++ ++.+..+|++.|.+.+.||+||+|+|| .|+++|.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7899999999999 467778899999999999999999999 999999999999999999999997
Q ss_pred -ceecceeCCCceeeccCC-C---CCCCcCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHhh
Q 031783 77 -IYHPNIDKLGRICLDILK-D---KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT 133 (153)
Q Consensus 77 -i~Hpnv~~~G~icl~~l~-~---~W~p~~~i~~il~~i~~ll~~p~~~~~~n~ea~~~~~~ 133 (153)
+||||||.+|+||++++. . .|+|.++|.++|.- ....++..|+..++.+
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~l--------gl~pwla~eip~lv~~ 161 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMAL--------GLGPWLAVEIPDLIQK 161 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHHH--------THHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHhh--------ccCchhhhhhHHHHHc
Confidence 999999999999999994 3 45699999999843 1223355555555543
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.83 E-value=2.8e-20 Score=133.62 Aligned_cols=114 Identities=24% Similarity=0.432 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhhCCC---CCeEEEeCCCCCcEEEEEEECCCCCCCCCcE---EEEEEEcCCCCCCCCCeeEEecc----
Q 031783 7 PRRIIKETQRLLSEPA---PGISASPSEDNMRYFNVMILGPTQSPYEGGV---FKLELFLPEEYPMAAPKVRFLTK---- 76 (153)
Q Consensus 7 ~~Rl~~E~~~l~~~~~---~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~---f~~~i~fp~~YP~~pP~v~f~~~---- 76 (153)
.+|..+|..++.+.-+ +...+...+|....+-+.+.|.-.++|+|+. |.+.|.||++||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 4678888887765322 2233344556666666667776669999998 88999999999999999988651
Q ss_pred ------ce-ecceeCCCceeeccCCCCCCC-cCCHHHHHHHHHHhhcCCCCCC
Q 031783 77 ------IY-HPNIDKLGRICLDILKDKWSP-ALQIRTVLLSIQALLSAPNPDD 121 (153)
Q Consensus 77 ------i~-Hpnv~~~G~icl~~l~~~W~p-~~~i~~il~~i~~ll~~p~~~~ 121 (153)
++ |||||.+|+||++.|. +|+| +.++.++|.+|.++|.+|+++.
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 9999999999999995 6999 6799999999999999999975
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.78 E-value=2.1e-20 Score=130.68 Aligned_cols=95 Identities=19% Similarity=0.316 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCc----------EEEEEEEcCCCCCCCCCeeEEecc
Q 031783 7 PRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGG----------VFKLELFLPEEYPMAAPKVRFLTK 76 (153)
Q Consensus 7 ~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v~f~~~ 76 (153)
..||.+||..|.+ +++-+.++-..|...+.|++||+|+|+ .|.+++.||.+||.+||.|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999987 455556666789999999999999999 999999999999999999999995
Q ss_pred -ceecceeCCCceeeccCC-C---CCCCcCCHHHHH
Q 031783 77 -IYHPNIDKLGRICLDILK-D---KWSPALQIRTVL 107 (153)
Q Consensus 77 -i~Hpnv~~~G~icl~~l~-~---~W~p~~~i~~il 107 (153)
.+||+++.+|+||++++. . .-.|.++|.+.|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 899999999999999862 1 224566777665
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.56 E-value=5.8e-15 Score=104.22 Aligned_cols=80 Identities=20% Similarity=0.457 Sum_probs=70.7
Q ss_pred CCCCcEEEEEEECCCCCCCCCcEEEE--EEEcCCCCCCCCCeeEEecc------ceecceeCCCceeeccCCCCCCC-cC
Q 031783 31 EDNMRYFNVMILGPTQSPYEGGVFKL--ELFLPEEYPMAAPKVRFLTK------IYHPNIDKLGRICLDILKDKWSP-AL 101 (153)
Q Consensus 31 ~~~~~~w~~~i~Gp~~tpyegg~f~~--~i~fp~~YP~~pP~v~f~~~------i~Hpnv~~~G~icl~~l~~~W~p-~~ 101 (153)
..++..|.++|. .+|+|+.|.+ .|-||++||++||.| |.++ ..|+|||.+|++|++.|.+ |++ ..
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTC
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCC
Confidence 468999999997 7899999995 899999999999999 6655 4799999999999999965 987 77
Q ss_pred CHHHHHHHHHHhhcC
Q 031783 102 QIRTVLLSIQALLSA 116 (153)
Q Consensus 102 ~i~~il~~i~~ll~~ 116 (153)
++.+++..|++.|.+
T Consensus 124 nL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 124 DLLGLIQVMIVVFGD 138 (146)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 899999999998864
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.21 E-value=0.0049 Score=41.62 Aligned_cols=70 Identities=17% Similarity=0.193 Sum_probs=46.0
Q ss_pred CChHHHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEec
Q 031783 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (153)
Q Consensus 4 ~~~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~ 75 (153)
.....+...|+..|..--+..+.+. .+....+.+.|....+..-+.-.+.+.+.+|++||.+||.+.+.+
T Consensus 9 ~~~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 9 TDYGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCHHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CChHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3445678889998886434445442 223466666665322222234578999999999999999987654
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.63 E-value=0.016 Score=39.06 Aligned_cols=69 Identities=17% Similarity=0.174 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCC--CCCcEEEEEEECCCCCCC--CCcEEEEEEEcCCCCCCCCCeeEEec
Q 031783 7 PRRIIKETQRLLSEPAPGISASPSE--DNMRYFNVMILGPTQSPY--EGGVFKLELFLPEEYPMAAPKVRFLT 75 (153)
Q Consensus 7 ~~Rl~~E~~~l~~~~~~~~~~~~~~--~~~~~w~~~i~Gp~~tpy--egg~f~~~i~fp~~YP~~pP~v~f~~ 75 (153)
..+...|+..|+.--...+.+.... .+...+.+.+....+..- ..-.+.+.|.+|++||..+|.|...+
T Consensus 10 ~e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 10 DWVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CCHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 4578899998886444455543222 234455556642222111 12478899999999999999998776
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.025 Score=38.56 Aligned_cols=66 Identities=14% Similarity=0.200 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCC-------CCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEec
Q 031783 8 RRIIKETQRLLSEPAPGISASPSE-------DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (153)
Q Consensus 8 ~Rl~~E~~~l~~~~~~~~~~~~~~-------~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~ 75 (153)
.+-..|+..|..--+..+.+. .. +....+.+.|.+..+ .-..-.+.+.+.+|++||..+|.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~-~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 13 EIQCNELEAIRSIYMDDFTDL-TKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHTTSSSSEECC-STTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHChhhheec-ccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 456777877776433334322 11 134667777773222 2123478899999999999999998765
No 59
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.61 E-value=0.12 Score=35.95 Aligned_cols=23 Identities=22% Similarity=0.355 Sum_probs=20.8
Q ss_pred EEEEEEEcCCCCCCCCCeeEEec
Q 031783 53 VFKLELFLPEEYPMAAPKVRFLT 75 (153)
Q Consensus 53 ~f~~~i~fp~~YP~~pP~v~f~~ 75 (153)
.+.++|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 89999999999999999997655
No 60
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.43 E-value=0.17 Score=36.54 Aligned_cols=83 Identities=16% Similarity=0.255 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCCCc
Q 031783 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGR 87 (153)
Q Consensus 8 ~Rl~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~G~ 87 (153)
.+|.+|+.+|.=+. +.-.+.++....+.+... .|-.+.++|.++.+||.++|.+...-|. |
T Consensus 4 ~~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------- 64 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV--P------- 64 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS--C-------
T ss_pred HHHHHHHHHhCCce-----eeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC--C-------
Confidence 36888888875432 222356788899998833 3678899999999999999987655443 1
Q ss_pred eeeccCCCCCCCcCCHHHHHHHHHHhh
Q 031783 88 ICLDILKDKWSPALQIRTVLLSIQALL 114 (153)
Q Consensus 88 icl~~l~~~W~p~~~i~~il~~i~~ll 114 (153)
+.-.|.|..++.+++.+.+..+
T Consensus 65 -----~~~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 65 -----FCASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHHH
T ss_pred -----cccccCCCccHHHHHHHHHHHH
Confidence 1137999999888887776655
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.07 E-value=0.2 Score=33.86 Aligned_cols=70 Identities=16% Similarity=0.188 Sum_probs=42.9
Q ss_pred ChHHHHHHHHHHHhhCCCCCeEEEeCCC-----CCcEEEEEEECCCC-C-CCCCcEEEEEEEcCCCCCCCCCeeEEec
Q 031783 5 NLPRRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQ-S-PYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~Gp~~-t-pyegg~f~~~i~fp~~YP~~pP~v~f~~ 75 (153)
....+...|+..|+.--...+....... ....+.+.+. +.+ . .-..-.+.+.|.||++||..+|.|.+.+
T Consensus 10 ~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 10 SYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp CHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred chHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 3456778888888764334444322111 1355666665 221 1 0012478999999999999999998743
No 62
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.24 E-value=0.13 Score=34.39 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHhhCCC--CCeEE-EeCCCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEe
Q 031783 6 LPRRIIKETQRLLSEPA--PGISA-SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFL 74 (153)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~--~~~~~-~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 74 (153)
...+...|+..|..--. ..+.+ .....+...+.+.+.. .+..-..-.+.+.+.+|++||..+|.+.+.
T Consensus 8 ~~e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 8 MAEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp SCHHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 34567788888875211 13332 1112234677787763 221111347899999999999999988644
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.92 E-value=0.19 Score=34.74 Aligned_cols=25 Identities=28% Similarity=0.595 Sum_probs=21.4
Q ss_pred cEEEEEEEcCCCCCCCCCeeEEecc
Q 031783 52 GVFKLELFLPEEYPMAAPKVRFLTK 76 (153)
Q Consensus 52 g~f~~~i~fp~~YP~~pP~v~f~~~ 76 (153)
-.+.+.|.+|.+||..||.+.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999986653
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=90.90 E-value=0.043 Score=36.25 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 116 APNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 116 ~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
-.....|.+.+.|++|.++.+.|...|+.|+.-||.
T Consensus 20 ~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 20 GETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp ------------------------------------
T ss_pred CcccCCchhHHHHHHHHhchhccccccccccccCcC
Confidence 344567899999999999999999999999977664
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=77.80 E-value=1.5 Score=20.47 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=17.5
Q ss_pred ChHHHHHHHHHHHhhCCCCCe
Q 031783 5 NLPRRIIKETQRLLSEPAPGI 25 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~~~~~~~ 25 (153)
+-..||.-|+..++.++++|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 346799999999999998874
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=37.72 E-value=1.1e+02 Score=21.63 Aligned_cols=46 Identities=15% Similarity=0.313 Sum_probs=34.4
Q ss_pred CCCCcEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccce
Q 031783 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78 (153)
Q Consensus 31 ~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~ 78 (153)
++..+.|.+-+.|+.+.-...-+=++...+.+.||. |...+..+-|
T Consensus 29 ~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 29 AEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 346789999999987765555677899999999974 6666665543
No 67
>2rp4_A Transcription factor P53; DMP53, oligomerization domain, tetramerizaiton domain, nucleus; NMR {Drosophila melanogaster}
Probab=37.56 E-value=66 Score=19.27 Aligned_cols=13 Identities=23% Similarity=0.626 Sum_probs=8.0
Q ss_pred CcEEEEEEEcCCC
Q 031783 51 GGVFKLELFLPEE 63 (153)
Q Consensus 51 gg~f~~~i~fp~~ 63 (153)
+|.|++.|.+|..
T Consensus 19 dGdYrL~itcpkK 31 (76)
T 2rp4_A 19 DGDYRLAITCPNK 31 (76)
T ss_dssp TTBEEEEEEESCH
T ss_pred CCceEEEEEeCcH
Confidence 4567776666543
No 68
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=36.57 E-value=88 Score=23.49 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=29.0
Q ss_pred CCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCCC--ceee
Q 031783 47 SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 47 tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~G--~icl 90 (153)
+-=|...|..++.=... .||.+.|....-.+..|+|| -+|.
T Consensus 197 skNENtRYFG~~tGG~~---TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 197 SRNDNCRYFGRVVGGAA---TPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp TSCCSEEEEEEEECCSS---CCCEEEEESSCCEECCCTTSCCEECT
T ss_pred CcCcCceeeEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 33444555555554444 78999999999999999875 4774
No 69
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=33.23 E-value=64 Score=22.44 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=29.2
Q ss_pred CCcEEEEEEECCCCC-------------CCCCcEEEEEEEcCCCCCCCCCe
Q 031783 33 NMRYFNVMILGPTQS-------------PYEGGVFKLELFLPEEYPMAAPK 70 (153)
Q Consensus 33 ~~~~w~~~i~Gp~~t-------------pyegg~f~~~i~fp~~YP~~pP~ 70 (153)
+-.+|+++..|..++ |-.-|.++|.+.-+.=-|.+-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 445999999986554 66779999999887766766666
No 70
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=33.12 E-value=1e+02 Score=24.25 Aligned_cols=24 Identities=21% Similarity=0.498 Sum_probs=20.1
Q ss_pred CCCeeEEeccceecceeCCC--ceee
Q 031783 67 AAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 67 ~pP~v~f~~~i~Hpnv~~~G--~icl 90 (153)
.||.+.|....-.+..|+|| -+|.
T Consensus 249 TPPVlqftNt~TTvLLDENGVGpLCk 274 (383)
T 1sid_A 249 TPPVLQFTNTLTTVLLDENGVGPLCK 274 (383)
T ss_dssp CCCEEEEESSCEEECCCTTSCCCBCS
T ss_pred CCCeEEeccceeEEEEcCCCcccccc
Confidence 68999999999999999875 3663
No 71
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=29.87 E-value=1.4e+02 Score=22.48 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=28.0
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCCC--ceee
Q 031783 48 PYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 48 pyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~G--~icl 90 (153)
-=|...|..++.=... .||.+.|....-.+..|++| -+|.
T Consensus 202 kNENtRYFG~~tGG~~---TPpvl~ftNt~TtvLldEnGvGpLCk 243 (289)
T 1vps_A 202 KNENTRYFGNYTGGTT---TPPVLQFTNTLTTVLLDENGVGPLCK 243 (289)
T ss_dssp SCTTEEEEEEEECCSS---CCCEEEEESSCCEECCCTTSCCCEES
T ss_pred cCcCceeeeeecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 3444455555554443 68999999999999999874 5774
No 72
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=28.84 E-value=54 Score=23.70 Aligned_cols=26 Identities=19% Similarity=0.539 Sum_probs=21.6
Q ss_pred CCCcEEEEEEEcCCCCCC-----CCCeeEEe
Q 031783 49 YEGGVFKLELFLPEEYPM-----AAPKVRFL 74 (153)
Q Consensus 49 yegg~f~~~i~fp~~YP~-----~pP~v~f~ 74 (153)
-+.|.|.|+-.+|--||. .||.|.|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 346899999999999998 78887665
No 73
>3nxg_A Major capsid protein VP1; beta-sandwich jelly roll, viral protein; 1.95A {Jc polyomavirus} PDB: 3nxd_C 3bwr_A* 3bwq_A*
Probab=28.83 E-value=1.1e+02 Score=22.87 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=30.6
Q ss_pred CCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCCC--ceee
Q 031783 45 TQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 45 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~G--~icl 90 (153)
+-+-=|...|..++.=... .||.+.|....-.+..|+|| -+|.
T Consensus 186 DPskNENtRYfG~~tGG~~---TPPVlqftNt~TTvLLDENGVGpLCk 230 (272)
T 3nxg_A 186 DPTRNENTRYFGTLTGGEN---VPPVLHITNTATTVLLDEFGVGPLCK 230 (272)
T ss_dssp CTTSCTTEEEEEEEECSTT---CCCEEEEESSCCEECCCTTSCCCBCG
T ss_pred CCCcCcCceeEEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 3344455556655555544 78999999999999999875 4774
No 74
>1sva_1 Simian virus 40; virus coat protein, icosahedral virus; 3.10A {Simian virus 40} SCOP: b.121.6.1
Probab=28.28 E-value=1.1e+02 Score=23.88 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=26.1
Q ss_pred CCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCCC--ceee
Q 031783 50 EGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 50 egg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~G--~icl 90 (153)
|...|..++.=... .||.+.|....-.+..|+|| -+|.
T Consensus 216 ENtRYFG~~tGG~~---TPPVlqftNt~TTvLLDENGVGpLCk 255 (361)
T 1sva_1 216 ENTRYFGTYTGGEN---VPPVLHITNTATTVLLDEQGVGPLCK 255 (361)
T ss_dssp TTEEEEEEEECCSS---CCCEEEEETTCCEECCCTTSCCCBCS
T ss_pred cCceeeEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 33444444443333 68999999999999999875 4773
No 75
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=26.46 E-value=54 Score=17.76 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=29.6
Q ss_pred HHHHHHhhcCCCCCCc-ccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 107 LLSIQALLSAPNPDDP-LSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 107 l~~i~~ll~~p~~~~~-~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
|..|..-+.+|+ .| .+..+....+.|+..-....|..+.+|+.
T Consensus 3 LqqLl~tlksp~--sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 3 LQDLLRTLKSPS--SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHHTCCSCC--CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHhcCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 444444555555 33 45667778889999888888888888764
No 76
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=25.67 E-value=1e+02 Score=21.24 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=25.3
Q ss_pred CCcEEEEEEECCCCC-------------CCCCcEEEEEEEcCCCCCCC
Q 031783 33 NMRYFNVMILGPTQS-------------PYEGGVFKLELFLPEEYPMA 67 (153)
Q Consensus 33 ~~~~w~~~i~Gp~~t-------------pyegg~f~~~i~fp~~YP~~ 67 (153)
+-.+|+++..|...+ |-.-|.++|.+.-+.=-|.+
T Consensus 37 ~dlewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpPd~~~ 84 (155)
T 1roc_A 37 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 84 (155)
T ss_dssp SCEEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred CCcEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCCCCccc
Confidence 447999999885554 66679999988876544444
No 77
>4fmh_A VP1; viral capsid protein, jelly roll, encapsidation, receptor BI sialylated oligosaccharides, viral protein; HET: SIA GAL; 1.85A {Merkel cell polyomavirus} PDB: 4fmg_A* 4fmi_A* 4fmj_A*
Probab=25.22 E-value=1.5e+02 Score=22.38 Aligned_cols=44 Identities=16% Similarity=0.271 Sum_probs=32.0
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCCC--ceee
Q 031783 44 PTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 44 p~~tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~G--~icl 90 (153)
|+-+-=|...|..++.=... .||.+.|....-.+..|+|| -+|.
T Consensus 202 PDPsrNENtRYFG~~tGG~~---TPPVl~ftNt~TTvLLDENGVGpLCk 247 (289)
T 4fmh_A 202 PDPSKNENSRYYGSIQTGSQ---TPTVLQFSNTLTTVLLDENGVGPLCK 247 (289)
T ss_dssp ECTTSCTTEEEEEEEECSSS---CCCEEEEETTCCEECCCTTSCCCBCG
T ss_pred CCCCcCcCceeeeEecCCCC---CCCeEEecCceeEEEEcCCCccccee
Confidence 33344556666666666555 78999999999999999875 4774
No 78
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=24.91 E-value=83 Score=18.95 Aligned_cols=42 Identities=17% Similarity=0.265 Sum_probs=30.3
Q ss_pred HHHhhcCCCCCCcccHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 110 IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 110 i~~ll~~p~~~~~~n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
|+.|+..-++...+.+++-.+..+=-+.|...+-..+.+.|+
T Consensus 11 L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAK 52 (76)
T 1h3o_B 11 LQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLAR 52 (76)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444446667788888888888888898888777777663
No 79
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=24.27 E-value=1.1e+02 Score=20.06 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCCCC
Q 031783 6 LPRRIIKETQRLLSEPAPGISASPSEDNM 34 (153)
Q Consensus 6 ~~~Rl~~E~~~l~~~~~~~~~~~~~~~~~ 34 (153)
.++.|..||.+|.+.+...++++..+...
T Consensus 32 lS~~Lid~La~i~~~~~e~fTle~i~s~~ 60 (122)
T 1u9d_A 32 LVPTLLNELSSLLSTARNAFTFELINTQY 60 (122)
T ss_dssp HHHHHHHHHHHHHTCCGGGCEEEECCCCC
T ss_pred HhHHHHHHHHHHHCCCcccEEEEEeeeEE
Confidence 46889999999999999999998766543
No 80
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=24.21 E-value=37 Score=16.10 Aligned_cols=12 Identities=25% Similarity=0.360 Sum_probs=8.2
Q ss_pred HHHHHHHHHHhh
Q 031783 8 RRIIKETQRLLS 19 (153)
Q Consensus 8 ~Rl~~E~~~l~~ 19 (153)
|++.+||.+|..
T Consensus 13 R~lLkeyY~L~~ 24 (26)
T 2c5k_P 13 RLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhhhc
Confidence 678889988764
No 81
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=24.13 E-value=29 Score=21.60 Aligned_cols=12 Identities=25% Similarity=0.371 Sum_probs=9.2
Q ss_pred hHHHHHHHHHHH
Q 031783 6 LPRRIIKETQRL 17 (153)
Q Consensus 6 ~~~Rl~~E~~~l 17 (153)
.+|||++|++-|
T Consensus 63 QLKRvQRdlrGL 74 (87)
T 2rf4_B 63 QLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHhhcCC
Confidence 468999988764
No 82
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=23.03 E-value=40 Score=22.81 Aligned_cols=29 Identities=21% Similarity=0.460 Sum_probs=23.3
Q ss_pred CCCeeEEe---ccceecceeCCCceeeccCCC
Q 031783 67 AAPKVRFL---TKIYHPNIDKLGRICLDILKD 95 (153)
Q Consensus 67 ~pP~v~f~---~~i~Hpnv~~~G~icl~~l~~ 95 (153)
.||.|.+. +.--|.+|..+|.+|++++.+
T Consensus 43 ~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 43 EPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 68988776 335688999999999999864
No 83
>3iys_A Major capsid protein VP1; avian, polyomavirus, APV, icosahedral virus, virus; 11.30A {Budgerigar fledgling disease polyomavi}
Probab=22.41 E-value=1.7e+02 Score=22.57 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=26.8
Q ss_pred CCCCCcEEEEEEEcCCCCCCCCCeeEEeccceecceeCCC--cee
Q 031783 47 SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG--RIC 89 (153)
Q Consensus 47 tpyegg~f~~~i~fp~~YP~~pP~v~f~~~i~Hpnv~~~G--~ic 89 (153)
+-=|...|..++.=.. ..||.+.|....-.+..|+|| -+|
T Consensus 204 skNENtRYFG~~tGG~---~TPPVlqftNt~TTvLLDENGVGpLC 245 (343)
T 3iys_A 204 AKNENTRYYGNLTGGP---ETPPVLAFTNTTTTILLDENGVGPLC 245 (343)
T ss_pred CcCcCceeeEEecCCC---CCCCeEEeccceeEEEEcCCCccccc
Confidence 3334444444444333 378999999999999999875 366
No 84
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=21.51 E-value=1.6e+02 Score=20.70 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=26.9
Q ss_pred CCcEEEEEEECCCCC-------------CCCCcEEEEEEEcCCCCCCCCC
Q 031783 33 NMRYFNVMILGPTQS-------------PYEGGVFKLELFLPEEYPMAAP 69 (153)
Q Consensus 33 ~~~~w~~~i~Gp~~t-------------pyegg~f~~~i~fp~~YP~~pP 69 (153)
+-.+|+++..|...+ |-.-|.++|.+.-..=.+.+-|
T Consensus 42 ~dleWkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP 91 (175)
T 2hue_A 42 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAELIP 91 (175)
T ss_dssp SCEEEEEEEESCTTCGGGEEEEEEEEECSCCSEEEEEEEEECCCCGGGSC
T ss_pred CCcEEEEEEEcCCCCccCCeEeeEEEECCccceeEEEEEEcCCCChhhCC
Confidence 447999999986655 7777999999887654444433
No 85
>2kru_A Light-independent protochlorophyllide reductase subunit B; NESG, PSI, BCHB, bacteriochlorophyll biosynthesis, chlorophyll biosynthesis; NMR {Chlorobaculum tepidum}
Probab=21.13 E-value=97 Score=17.99 Aligned_cols=28 Identities=14% Similarity=0.025 Sum_probs=21.4
Q ss_pred cHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 031783 124 SENIAKHWKTNEAEAVETAKEWTRLYAS 151 (153)
Q Consensus 124 n~ea~~~~~~~~~~f~~~a~~~~~~~a~ 151 (153)
.+||...+++=|-....+||.-+++||.
T Consensus 7 t~EAe~~LkkIP~FVR~kvrr~tE~~Ar 34 (63)
T 2kru_A 7 TAEAEKMLGKVPFFVRKKVRKNTDNYAR 34 (63)
T ss_dssp CHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4677777777776667888988888883
No 86
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=21.07 E-value=26 Score=18.40 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=11.7
Q ss_pred ChHHHHHHHHHHHhh
Q 031783 5 NLPRRIIKETQRLLS 19 (153)
Q Consensus 5 ~~~~Rl~~E~~~l~~ 19 (153)
+..+||..|++++++
T Consensus 28 ~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 28 SKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 346899999998763
No 87
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=20.39 E-value=1.5e+02 Score=20.95 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=25.2
Q ss_pred CCcEEEEEEECCCCC-------------CCCCcEEEEEEEcCCCCCCC
Q 031783 33 NMRYFNVMILGPTQS-------------PYEGGVFKLELFLPEEYPMA 67 (153)
Q Consensus 33 ~~~~w~~~i~Gp~~t-------------pyegg~f~~~i~fp~~YP~~ 67 (153)
+-.+|+++..|...+ |-.-|.++|.+.-+.=.|.+
T Consensus 38 ~dleWkliYVgSa~s~~~DQ~Ldsv~VGPi~~G~~kFv~~adpPd~~~ 85 (179)
T 2idc_A 38 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 85 (179)
T ss_dssp SCEEEEEEECSCTTCGGGCEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred CCcEEEEEEEcCCCcccCCeEeeEEEECCccceeEEEEEEcCCCCccc
Confidence 447999999986554 66679999998865544433
Done!