Query 031788
Match_columns 153
No_of_seqs 105 out of 1107
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 08:11:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031788.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031788hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 100.0 8.9E-29 3E-33 162.8 7.8 99 29-142 2-102 (103)
2 1tq1_A AT5G66040, senescence-a 100.0 4.2E-28 1.4E-32 165.4 10.2 116 24-141 13-128 (129)
3 3gk5_A Uncharacterized rhodane 99.9 7.7E-28 2.6E-32 159.5 9.9 105 27-147 2-106 (108)
4 1gmx_A GLPE protein; transfera 99.9 2.6E-27 9E-32 156.7 9.9 104 26-144 2-106 (108)
5 3eme_A Rhodanese-like domain p 99.9 1.4E-27 4.8E-32 156.7 8.1 99 29-142 2-102 (103)
6 3foj_A Uncharacterized protein 99.9 1.4E-27 4.6E-32 156.1 7.9 97 29-140 2-100 (100)
7 1qxn_A SUD, sulfide dehydrogen 99.9 1.9E-26 6.6E-31 158.8 11.4 112 24-149 18-136 (137)
8 3d1p_A Putative thiosulfate su 99.9 1.1E-26 3.8E-31 160.0 9.9 117 24-142 18-138 (139)
9 3hix_A ALR3790 protein; rhodan 99.9 7.3E-27 2.5E-31 154.2 8.3 100 35-147 2-104 (106)
10 3ilm_A ALR3790 protein; rhodan 99.9 1.2E-26 4.1E-31 160.6 9.6 102 31-145 2-106 (141)
11 2hhg_A Hypothetical protein RP 99.9 2.5E-26 8.4E-31 158.1 10.7 110 25-147 18-138 (139)
12 2k0z_A Uncharacterized protein 99.9 4.4E-26 1.5E-30 151.4 5.4 102 27-145 3-105 (110)
13 3nhv_A BH2092 protein; alpha-b 99.9 2.6E-25 9.1E-30 154.3 7.8 105 29-147 16-125 (144)
14 1wv9_A Rhodanese homolog TT165 99.9 4.4E-26 1.5E-30 147.3 3.2 93 29-137 2-94 (94)
15 3flh_A Uncharacterized protein 99.9 5.6E-25 1.9E-29 148.9 8.7 101 29-144 15-121 (124)
16 2fsx_A RV0390, COG0607: rhodan 99.9 1.9E-24 6.4E-29 150.4 10.0 115 26-145 2-142 (148)
17 1vee_A Proline-rich protein fa 99.9 3.7E-24 1.3E-28 146.7 8.0 114 27-148 3-130 (134)
18 1t3k_A Arath CDC25, dual-speci 99.9 1.3E-24 4.5E-29 152.0 4.2 111 25-145 24-144 (152)
19 1e0c_A Rhodanese, sulfurtransf 99.9 7.9E-23 2.7E-27 154.6 12.3 117 28-146 8-133 (271)
20 3g5j_A Putative ATP/GTP bindin 99.9 2.8E-23 9.5E-28 141.4 8.2 104 27-136 3-130 (134)
21 2jtq_A Phage shock protein E; 99.9 2.3E-23 7.7E-28 132.0 6.2 77 44-134 2-79 (85)
22 1urh_A 3-mercaptopyruvate sulf 99.9 1.7E-22 5.9E-27 153.5 12.1 116 28-145 3-137 (280)
23 3hzu_A Thiosulfate sulfurtrans 99.9 1.4E-22 4.9E-27 156.9 11.4 116 28-145 39-162 (318)
24 3i2v_A Adenylyltransferase and 99.9 3.2E-23 1.1E-27 140.1 6.1 104 30-139 2-122 (127)
25 1e0c_A Rhodanese, sulfurtransf 99.9 1.7E-22 5.8E-27 152.8 9.8 112 29-142 147-271 (271)
26 1c25_A CDC25A; hydrolase, cell 99.9 2.4E-22 8.3E-27 141.4 8.8 108 24-144 18-149 (161)
27 3olh_A MST, 3-mercaptopyruvate 99.9 1.5E-21 5.1E-26 150.2 12.7 120 24-145 17-160 (302)
28 1urh_A 3-mercaptopyruvate sulf 99.9 4.3E-22 1.5E-26 151.3 9.5 112 30-143 153-279 (280)
29 1rhs_A Sulfur-substituted rhod 99.9 1.9E-21 6.6E-26 149.0 13.2 118 27-146 6-146 (296)
30 1rhs_A Sulfur-substituted rhod 99.9 1.2E-21 4.3E-26 150.0 12.0 115 29-145 160-291 (296)
31 1uar_A Rhodanese; sulfurtransf 99.9 1.1E-21 3.8E-26 149.3 11.6 113 30-144 147-284 (285)
32 3hzu_A Thiosulfate sulfurtrans 99.9 9.4E-22 3.2E-26 152.3 11.2 114 30-146 180-312 (318)
33 1qb0_A Protein (M-phase induce 99.9 1.1E-21 3.8E-26 144.0 10.4 107 25-144 40-171 (211)
34 3aay_A Putative thiosulfate su 99.9 7.7E-22 2.6E-26 149.6 9.8 116 28-145 5-128 (277)
35 1yt8_A Thiosulfate sulfurtrans 99.9 1.2E-21 4.2E-26 161.1 11.8 107 26-145 4-113 (539)
36 2j6p_A SB(V)-AS(V) reductase; 99.9 9.2E-22 3.2E-26 137.5 9.0 108 26-143 2-123 (152)
37 2vsw_A Dual specificity protei 99.9 4.6E-22 1.6E-26 138.8 7.4 116 28-145 3-136 (153)
38 2a2k_A M-phase inducer phospha 99.9 1.4E-21 4.7E-26 139.3 9.8 108 24-144 19-151 (175)
39 1uar_A Rhodanese; sulfurtransf 99.9 5.3E-22 1.8E-26 151.1 8.1 117 28-146 7-131 (285)
40 3op3_A M-phase inducer phospha 99.9 2.7E-21 9.2E-26 142.3 11.3 106 25-143 53-183 (216)
41 3aay_A Putative thiosulfate su 99.9 2.1E-21 7.3E-26 147.2 10.5 110 31-143 146-276 (277)
42 3olh_A MST, 3-mercaptopyruvate 99.9 1.8E-21 6.2E-26 149.7 10.2 110 29-140 175-299 (302)
43 4f67_A UPF0176 protein LPG2838 99.9 2.1E-21 7.3E-26 146.6 9.6 102 26-137 119-223 (265)
44 1okg_A Possible 3-mercaptopyru 99.8 3.1E-21 1.1E-25 152.4 10.4 114 28-145 13-146 (373)
45 2ouc_A Dual specificity protei 99.8 2.6E-21 8.8E-26 132.7 8.6 109 30-144 2-140 (142)
46 2wlr_A Putative thiosulfate su 99.8 1.1E-20 3.9E-25 151.2 11.4 117 30-148 273-412 (423)
47 2eg4_A Probable thiosulfate su 99.8 5.6E-21 1.9E-25 141.5 8.1 98 30-142 122-230 (230)
48 1yt8_A Thiosulfate sulfurtrans 99.8 1.4E-20 4.7E-25 154.9 11.1 107 27-147 375-482 (539)
49 3tp9_A Beta-lactamase and rhod 99.8 5.6E-21 1.9E-25 154.8 8.1 101 28-142 373-474 (474)
50 3f4a_A Uncharacterized protein 99.8 3.5E-21 1.2E-25 136.8 4.9 118 21-142 23-158 (169)
51 2wlr_A Putative thiosulfate su 99.8 2.9E-20 1E-24 148.8 9.2 116 28-145 123-253 (423)
52 1hzm_A Dual specificity protei 99.8 3.4E-20 1.2E-24 129.3 5.9 107 26-136 13-142 (154)
53 3tg1_B Dual specificity protei 99.8 2.2E-19 7.4E-24 126.1 9.8 113 23-141 5-147 (158)
54 3ics_A Coenzyme A-disulfide re 99.8 1.3E-19 4.5E-24 149.9 8.9 100 23-137 483-582 (588)
55 3ntd_A FAD-dependent pyridine 99.8 5.2E-20 1.8E-24 151.3 5.9 98 24-137 468-565 (565)
56 1okg_A Possible 3-mercaptopyru 99.8 7.7E-19 2.6E-23 138.7 6.8 100 42-143 173-295 (373)
57 1whb_A KIAA0055; deubiqutinati 99.8 9.6E-18 3.3E-22 117.6 11.0 121 25-150 11-154 (157)
58 3utn_X Thiosulfate sulfurtrans 99.7 2.2E-17 7.6E-22 128.1 12.6 119 24-145 23-163 (327)
59 2gwf_A Ubiquitin carboxyl-term 99.7 1.5E-17 5E-22 116.7 10.1 116 25-145 16-154 (157)
60 2eg4_A Probable thiosulfate su 99.7 8.1E-18 2.8E-22 124.5 9.1 94 43-145 6-106 (230)
61 3tp9_A Beta-lactamase and rhod 99.7 5E-18 1.7E-22 137.5 7.6 105 25-143 269-373 (474)
62 3r2u_A Metallo-beta-lactamase 99.7 1.1E-18 3.7E-23 141.3 0.0 86 36-135 379-465 (466)
63 3utn_X Thiosulfate sulfurtrans 99.7 2E-16 6.7E-21 122.8 10.9 106 30-137 185-317 (327)
64 3r2u_A Metallo-beta-lactamase 99.4 3E-13 1E-17 109.4 7.0 79 42-133 295-374 (466)
65 2f46_A Hypothetical protein; s 98.0 1E-05 3.4E-10 55.9 6.2 85 30-121 29-129 (156)
66 4erc_A Dual specificity protei 97.1 0.0012 4E-08 44.5 5.8 86 32-121 24-117 (150)
67 2img_A Dual specificity protei 96.4 0.007 2.4E-07 40.5 5.9 86 32-121 25-118 (151)
68 1xri_A AT1G05000; structural g 95.7 0.018 6E-07 38.8 5.0 90 32-121 22-120 (151)
69 3rgo_A Protein-tyrosine phosph 95.5 0.015 5.2E-07 39.2 4.3 88 34-121 18-118 (157)
70 1ywf_A Phosphotyrosine protein 95.4 0.11 3.6E-06 39.4 8.9 45 28-72 53-102 (296)
71 1zzw_A Dual specificity protei 95.3 0.03 1E-06 37.6 5.0 80 41-121 27-112 (149)
72 2r0b_A Serine/threonine/tyrosi 95.1 0.091 3.1E-06 35.3 7.1 86 35-121 25-119 (154)
73 1yz4_A DUSP15, dual specificit 95.1 0.052 1.8E-06 36.9 5.8 77 41-121 31-113 (160)
74 1wrm_A Dual specificity phosph 94.8 0.084 2.9E-06 36.1 6.3 76 41-120 30-111 (165)
75 2hcm_A Dual specificity protei 94.7 0.06 2.1E-06 36.7 5.3 78 41-121 35-118 (164)
76 2wgp_A Dual specificity protei 94.6 0.088 3E-06 37.0 6.2 77 41-120 49-131 (190)
77 2nt2_A Protein phosphatase sli 94.4 0.11 3.7E-06 34.6 6.1 78 39-120 25-109 (145)
78 1fpz_A Cyclin-dependent kinase 94.0 0.14 4.7E-06 36.5 6.3 86 32-121 60-163 (212)
79 3ezz_A Dual specificity protei 93.9 0.25 8.7E-06 32.6 7.1 78 41-120 27-109 (144)
80 2esb_A Dual specificity protei 93.9 0.19 6.6E-06 35.1 6.7 77 41-120 43-125 (188)
81 2oud_A Dual specificity protei 93.2 0.17 5.9E-06 35.0 5.4 79 41-121 31-116 (177)
82 2e0t_A Dual specificity phosph 93.1 0.12 4.2E-06 34.5 4.4 77 44-121 29-114 (151)
83 3rz2_A Protein tyrosine phosph 93.0 0.37 1.3E-05 33.5 7.0 91 31-121 48-145 (189)
84 3f81_A Dual specificity protei 92.9 0.14 4.7E-06 35.5 4.5 79 42-121 52-144 (183)
85 3s4o_A Protein tyrosine phosph 92.5 0.36 1.2E-05 32.4 6.1 86 31-121 34-138 (167)
86 3s4e_A Dual specificity protei 92.0 0.37 1.3E-05 31.9 5.6 78 41-121 27-110 (144)
87 2i6j_A Ssoptp, sulfolobus solf 91.4 0.25 8.4E-06 33.2 4.3 81 33-120 18-117 (161)
88 2g6z_A Dual specificity protei 91.2 0.53 1.8E-05 33.7 6.0 74 44-120 33-111 (211)
89 2hxp_A Dual specificity protei 90.7 0.18 6.1E-06 34.1 3.0 81 36-120 24-113 (155)
90 1rxd_A Protein tyrosine phosph 90.5 0.39 1.3E-05 32.0 4.6 90 28-121 24-124 (159)
91 1yn9_A BVP, polynucleotide 5'- 89.9 0.24 8.3E-06 33.8 3.2 86 31-121 44-142 (169)
92 2q05_A Late protein H1, dual s 88.5 0.98 3.3E-05 31.6 5.6 75 44-121 75-154 (195)
93 2pq5_A Dual specificity protei 88.1 2.4 8.1E-05 29.9 7.5 76 41-120 69-159 (205)
94 1v8c_A MOAD related protein; r 88.1 0.071 2.4E-06 37.1 -0.6 23 45-73 123-145 (168)
95 3emu_A Leucine rich repeat and 88.0 2.2 7.5E-05 28.8 7.0 73 41-121 33-116 (161)
96 2j16_A SDP-1, tyrosine-protein 87.8 0.61 2.1E-05 32.6 4.0 74 44-120 67-145 (182)
97 3cm3_A Late protein H1, dual s 86.9 1.2 4.2E-05 30.4 5.2 75 44-121 58-137 (176)
98 2y96_A Dual specificity phosph 86.7 3.3 0.00011 29.5 7.6 78 41-120 77-167 (219)
99 1ohe_A CDC14B, CDC14B2 phospha 86.2 5.6 0.00019 30.6 9.1 81 33-120 207-297 (348)
100 3nme_A Ptpkis1 protein, SEX4 g 86.2 2.5 8.4E-05 31.7 6.9 83 32-120 28-134 (294)
101 2jgn_A DBX, DDX3, ATP-dependen 84.9 1.6 5.5E-05 30.1 5.0 38 93-131 44-81 (185)
102 2hjv_A ATP-dependent RNA helic 82.3 2.1 7.2E-05 28.7 4.6 36 94-130 34-69 (163)
103 2c46_A MRNA capping enzyme; ph 81.6 8.3 0.00028 27.9 7.9 85 30-120 66-169 (241)
104 1t5i_A C_terminal domain of A 80.6 2.6 8.7E-05 28.6 4.6 36 94-130 30-65 (172)
105 2rb4_A ATP-dependent RNA helic 79.9 2.4 8E-05 28.7 4.3 36 94-130 33-68 (175)
106 1fuk_A Eukaryotic initiation f 79.4 3.3 0.00011 27.6 4.9 36 94-130 29-64 (165)
107 3d3k_A Enhancer of mRNA-decapp 75.4 3.4 0.00012 30.5 4.2 29 96-125 86-117 (259)
108 2p6n_A ATP-dependent RNA helic 74.5 4.4 0.00015 28.0 4.5 36 94-130 53-88 (191)
109 3gxh_A Putative phosphatase (D 74.3 16 0.00056 24.2 7.8 88 30-121 27-124 (157)
110 2o8n_A APOA-I binding protein; 74.0 3.9 0.00013 30.3 4.2 45 96-141 80-137 (265)
111 3d3j_A Enhancer of mRNA-decapp 73.1 4 0.00014 30.9 4.2 29 96-125 133-164 (306)
112 1jzt_A Hypothetical 27.5 kDa p 72.9 9.8 0.00033 27.7 6.1 45 96-141 59-117 (246)
113 4a29_A Engineered retro-aldol 71.0 21 0.00071 26.4 7.5 89 30-123 136-230 (258)
114 3eaq_A Heat resistant RNA depe 70.8 4.6 0.00016 28.3 3.9 37 93-130 29-65 (212)
115 4fak_A Ribosomal RNA large sub 70.1 8.8 0.0003 26.3 5.0 46 87-132 66-116 (163)
116 2v1x_A ATP-dependent DNA helic 70.0 5.4 0.00019 32.8 4.6 36 94-130 266-301 (591)
117 1oyw_A RECQ helicase, ATP-depe 68.1 6.7 0.00023 31.6 4.7 37 94-131 235-271 (523)
118 2d7d_A Uvrabc system protein B 67.0 6.6 0.00023 32.8 4.6 47 83-130 433-479 (661)
119 1c4o_A DNA nucleotide excision 66.5 6 0.00021 33.0 4.2 47 83-130 427-473 (664)
120 3v0d_A Voltage-sensor containi 65.8 12 0.0004 28.7 5.5 85 31-120 50-146 (339)
121 3to5_A CHEY homolog; alpha(5)b 65.8 10 0.00034 24.7 4.5 42 93-134 10-51 (134)
122 2i4i_A ATP-dependent RNA helic 65.2 9.5 0.00032 29.0 4.9 39 92-131 273-311 (417)
123 3hh1_A Tetrapyrrole methylase 63.1 25 0.00087 22.1 6.4 93 27-128 17-116 (117)
124 3rss_A Putative uncharacterize 62.6 20 0.00067 29.0 6.5 47 94-141 51-110 (502)
125 1to0_A Hypothetical UPF0247 pr 61.7 15 0.00051 25.2 4.9 47 86-132 61-112 (167)
126 3m3h_A OPRT, oprtase, orotate 60.7 15 0.00053 26.5 5.0 51 92-142 134-194 (234)
127 1hv8_A Putative ATP-dependent 60.7 14 0.00047 27.3 5.0 38 92-130 235-272 (367)
128 3ndc_A Precorrin-4 C(11)-methy 60.4 46 0.0016 24.2 8.1 107 26-141 14-128 (264)
129 1s4d_A Uroporphyrin-III C-meth 58.6 51 0.0017 24.1 8.6 112 26-141 25-144 (280)
130 1xti_A Probable ATP-dependent 58.2 15 0.0005 27.6 4.8 37 93-130 248-284 (391)
131 2yjt_D ATP-dependent RNA helic 62.7 2.1 7.2E-05 28.9 0.0 37 94-131 29-65 (170)
132 3nbm_A PTS system, lactose-spe 58.0 9.3 0.00032 24.2 3.1 29 93-121 4-36 (108)
133 3i32_A Heat resistant RNA depe 57.2 10 0.00035 28.3 3.7 36 94-130 27-62 (300)
134 1vdm_A Purine phosphoribosyltr 56.7 12 0.0004 24.6 3.6 31 94-124 82-115 (153)
135 3fwz_A Inner membrane protein 56.5 12 0.00039 24.2 3.5 45 99-144 10-57 (140)
136 2pfu_A Biopolymer transport EX 56.2 27 0.00092 21.0 5.1 45 83-127 43-92 (99)
137 2wns_A Orotate phosphoribosylt 55.1 25 0.00086 24.5 5.3 49 93-141 109-166 (205)
138 1wp9_A ATP-dependent RNA helic 54.8 18 0.00062 27.6 4.9 35 93-128 359-393 (494)
139 1jdq_A TM006 protein, hypothet 54.6 35 0.0012 21.0 6.7 31 92-122 50-80 (98)
140 3dez_A OPRT, oprtase, orotate 54.6 17 0.00056 26.5 4.3 51 92-142 146-206 (243)
141 2ybo_A Methyltransferase; SUMT 54.3 52 0.0018 24.3 7.2 111 27-141 36-154 (294)
142 4e16_A Precorrin-4 C(11)-methy 54.3 57 0.002 23.4 7.7 107 26-141 15-129 (253)
143 3fht_A ATP-dependent RNA helic 54.0 16 0.00054 27.6 4.4 36 94-130 265-300 (412)
144 3kwp_A Predicted methyltransfe 54.0 41 0.0014 25.1 6.5 106 26-140 26-140 (296)
145 3czc_A RMPB; alpha/beta sandwi 53.9 11 0.00037 23.7 2.9 27 95-121 18-49 (110)
146 1vch_A Phosphoribosyltransfera 53.2 16 0.00053 24.6 3.9 32 94-125 119-153 (175)
147 2l69_A Rossmann 2X3 fold prote 53.1 38 0.0013 21.0 8.0 84 33-127 15-108 (134)
148 3pey_A ATP-dependent RNA helic 52.8 18 0.00061 27.0 4.5 37 93-130 241-277 (395)
149 2j0s_A ATP-dependent RNA helic 52.3 18 0.00061 27.4 4.4 36 94-130 275-310 (410)
150 3mmj_A MYO-inositol hexaphosph 52.1 29 0.00098 26.4 5.4 43 62-109 181-228 (314)
151 3ohg_A Uncharacterized protein 51.6 22 0.00077 26.5 4.7 26 106-131 219-244 (285)
152 1xxa_A ARGR, arginine represso 51.6 18 0.0006 21.4 3.4 27 92-118 47-73 (78)
153 1zn8_A APRT, adenine phosphori 51.4 17 0.00059 24.6 3.9 32 93-124 118-152 (180)
154 3jux_A Protein translocase sub 51.2 15 0.00051 31.7 4.0 37 93-130 472-508 (822)
155 1ve2_A Uroporphyrin-III C-meth 50.6 63 0.0021 22.7 8.1 112 26-142 13-131 (235)
156 1id1_A Putative potassium chan 50.5 16 0.00055 23.8 3.5 29 99-128 6-34 (153)
157 1z5z_A Helicase of the SNF2/RA 50.1 15 0.00051 26.9 3.5 38 92-130 109-147 (271)
158 3ipz_A Monothiol glutaredoxin- 49.8 33 0.0011 21.1 4.8 38 83-121 6-49 (109)
159 1s2m_A Putative ATP-dependent 49.7 12 0.00039 28.4 3.0 37 93-130 256-292 (400)
160 1tvm_A PTS system, galactitol- 49.7 15 0.00051 23.2 3.1 28 94-121 20-52 (113)
161 2l2q_A PTS system, cellobiose- 49.4 9.1 0.00031 24.0 2.0 28 94-121 3-34 (109)
162 1i5e_A Uracil phosphoribosyltr 49.4 22 0.00074 25.1 4.2 33 94-126 123-158 (209)
163 2geb_A Hypoxanthine-guanine ph 48.6 20 0.00069 24.5 3.9 32 94-125 97-131 (185)
164 2zfz_A Arginine repressor; DNA 48.3 19 0.00064 21.3 3.2 26 92-117 52-77 (79)
165 3kkj_A Amine oxidase, flavin-c 48.3 19 0.00064 24.5 3.7 28 99-127 5-32 (336)
166 2dy0_A APRT, adenine phosphori 48.2 21 0.00072 24.5 3.9 49 93-141 124-182 (190)
167 3fpn_A Geobacillus stearotherm 48.0 40 0.0014 21.7 4.9 42 83-125 8-53 (119)
168 1y0b_A Xanthine phosphoribosyl 47.5 22 0.00074 24.5 3.9 49 93-141 118-176 (197)
169 1g2q_A Adenine phosphoribosylt 47.4 22 0.00075 24.3 3.9 32 93-124 120-154 (187)
170 3tsm_A IGPS, indole-3-glycerol 47.4 82 0.0028 23.2 8.3 88 31-123 153-246 (272)
171 1hgx_A HGXPRTASE, hypoxanthine 47.0 22 0.00074 24.2 3.8 33 94-126 94-129 (183)
172 4ea9_A Perosamine N-acetyltran 47.0 23 0.00077 24.7 4.0 49 94-143 11-59 (220)
173 1vkr_A Mannitol-specific PTS s 46.8 21 0.0007 23.1 3.4 27 94-120 12-43 (125)
174 1tf5_A Preprotein translocase 46.7 16 0.00053 31.7 3.5 38 93-131 430-467 (844)
175 1pjq_A CYSG, siroheme synthase 46.7 80 0.0027 24.9 7.5 111 27-141 227-345 (457)
176 3llv_A Exopolyphosphatase-rela 46.4 21 0.00071 22.7 3.5 43 99-142 9-54 (141)
177 1o6d_A Hypothetical UPF0247 pr 45.7 32 0.0011 23.4 4.4 49 85-134 55-108 (163)
178 3hz7_A Uncharacterized protein 45.6 47 0.0016 19.9 4.9 30 92-121 25-55 (87)
179 1e2b_A Enzyme IIB-cellobiose; 45.5 15 0.00051 23.0 2.6 26 96-121 4-33 (106)
180 1yfz_A Hypoxanthine-guanine ph 45.5 24 0.0008 24.6 3.9 32 94-125 117-151 (205)
181 3eiq_A Eukaryotic initiation f 45.3 18 0.00062 27.3 3.5 38 93-131 278-315 (414)
182 1dku_A Protein (phosphoribosyl 44.8 26 0.0009 26.4 4.3 34 94-127 216-252 (317)
183 3jx9_A Putative phosphoheptose 44.2 36 0.0012 23.3 4.5 31 92-122 75-107 (170)
184 1b4b_A Arginine repressor; cor 44.0 16 0.00055 21.1 2.3 26 92-117 44-69 (71)
185 1iuk_A Hypothetical protein TT 43.8 28 0.00095 22.7 3.8 35 94-129 12-49 (140)
186 3lvj_C Sulfurtransferase TUSA; 43.7 48 0.0016 19.4 6.5 31 92-122 34-64 (82)
187 1ufr_A TT1027, PYR mRNA-bindin 43.4 25 0.00084 23.9 3.6 32 94-125 95-130 (181)
188 2fsf_A Preprotein translocase 43.3 31 0.0011 29.9 4.8 38 93-131 439-476 (853)
189 1l1q_A Adenine phosphoribosylt 43.1 30 0.001 23.6 4.0 32 93-124 115-151 (186)
190 4dgk_A Phytoene dehydrogenase; 43.0 19 0.00064 28.2 3.3 31 96-128 2-32 (501)
191 2gk4_A Conserved hypothetical 42.4 29 0.001 25.0 4.0 25 104-129 28-52 (232)
192 1wd5_A Hypothetical protein TT 42.3 30 0.001 24.1 4.0 33 94-126 119-154 (208)
193 3k5w_A Carbohydrate kinase; 11 42.1 57 0.0019 26.1 6.0 49 92-142 43-104 (475)
194 2aee_A OPRT, oprtase, orotate 41.9 29 0.001 24.2 3.9 49 93-141 115-173 (211)
195 3i5x_A ATP-dependent RNA helic 41.8 32 0.0011 27.5 4.6 37 93-130 337-376 (563)
196 1je3_A EC005, hypothetical 8.6 41.6 45 0.0015 20.5 4.3 30 92-121 51-80 (97)
197 1pav_A Hypothetical protein TA 41.6 34 0.0012 19.7 3.6 30 92-121 30-59 (78)
198 1d5r_A Phosphoinositide phosph 41.3 49 0.0017 24.8 5.3 84 31-119 42-137 (324)
199 1a3c_A PYRR, pyrimidine operon 41.3 27 0.00093 23.6 3.6 32 94-125 97-132 (181)
200 1pzm_A HGPRT, hypoxanthine-gua 41.2 31 0.001 24.2 3.9 31 94-124 117-150 (211)
201 1u9y_A RPPK;, ribose-phosphate 40.8 31 0.001 25.6 4.0 31 94-124 204-237 (284)
202 1tc1_A Protein (hypoxanthine p 40.7 30 0.001 24.5 3.9 32 94-125 102-136 (220)
203 3o8b_A HCV NS3 protease/helica 40.7 20 0.00067 30.2 3.2 37 94-131 395-431 (666)
204 1o5o_A Uracil phosphoribosyltr 40.1 37 0.0013 24.3 4.2 33 94-126 135-170 (221)
205 2p1z_A Phosphoribosyltransfera 40.0 27 0.00093 23.8 3.4 50 93-142 112-170 (180)
206 3sqw_A ATP-dependent RNA helic 40.0 34 0.0012 27.6 4.5 37 93-130 286-325 (579)
207 2db3_A ATP-dependent RNA helic 39.5 33 0.0011 26.6 4.2 34 96-130 301-334 (434)
208 1npy_A Hypothetical shikimate 39.3 73 0.0025 23.2 5.9 47 83-130 106-153 (271)
209 1ao0_A Glutamine phosphoribosy 39.0 36 0.0012 27.0 4.4 34 94-127 337-373 (459)
210 1nkt_A Preprotein translocase 38.9 35 0.0012 29.8 4.5 38 93-131 458-495 (922)
211 3e05_A Precorrin-6Y C5,15-meth 38.9 54 0.0018 22.1 4.9 38 83-120 123-160 (204)
212 1cbf_A Cobalt-precorrin-4 tran 38.8 1.1E+02 0.0038 22.2 8.5 107 26-141 31-145 (285)
213 2cwd_A Low molecular weight ph 38.4 16 0.00056 24.5 2.0 40 94-133 3-48 (161)
214 1jbe_A Chemotaxis protein CHEY 38.1 56 0.0019 19.6 4.5 18 112-129 21-38 (128)
215 2g1u_A Hypothetical protein TM 38.0 44 0.0015 21.7 4.1 33 94-128 18-50 (155)
216 2p5m_A Arginine repressor; alp 37.9 20 0.00069 21.4 2.2 26 92-117 56-81 (83)
217 1wyz_A Putative S-adenosylmeth 37.5 80 0.0027 22.4 5.8 56 83-139 71-134 (242)
218 3e8x_A Putative NAD-dependent 37.1 35 0.0012 23.6 3.7 33 94-127 20-52 (236)
219 1ns5_A Hypothetical protein YB 36.9 47 0.0016 22.4 4.1 45 87-133 59-108 (155)
220 2ywu_A Hypoxanthine-guanine ph 36.8 40 0.0014 23.1 3.9 31 94-124 94-127 (181)
221 1wy5_A TILS, hypothetical UPF0 36.7 77 0.0026 23.5 5.7 39 83-121 10-54 (317)
222 4h3k_B RNA polymerase II subun 36.7 44 0.0015 23.8 4.0 30 96-126 26-56 (214)
223 2e55_A Uracil phosphoribosyltr 36.7 37 0.0013 24.0 3.7 31 94-124 120-153 (208)
224 2j48_A Two-component sensor ki 36.5 53 0.0018 19.0 4.1 10 111-120 37-46 (119)
225 1qb7_A APRT, adenine phosphori 36.5 39 0.0013 24.1 3.9 31 93-123 136-169 (236)
226 2d59_A Hypothetical protein PH 36.4 42 0.0014 21.9 3.8 36 93-129 20-58 (144)
227 2yzk_A OPRT, oprtase, orotate 36.4 40 0.0014 22.8 3.8 48 94-141 105-161 (178)
228 3rof_A Low molecular weight pr 36.4 19 0.00065 24.3 2.1 38 96-133 7-49 (158)
229 3ohp_A Hypoxanthine phosphorib 36.0 42 0.0014 22.9 3.9 32 94-125 90-124 (177)
230 1sby_A Alcohol dehydrogenase; 35.7 41 0.0014 23.7 3.9 32 95-126 5-36 (254)
231 3hvu_A Hypoxanthine phosphorib 35.1 48 0.0016 23.3 4.1 31 94-124 115-148 (204)
232 3qw4_B UMP synthase; N-termina 35.1 82 0.0028 25.0 5.9 51 92-142 362-421 (453)
233 1pdo_A Mannose permease; phosp 34.8 90 0.0031 20.0 5.7 45 83-128 43-91 (135)
234 2ps1_A Orotate phosphoribosylt 34.8 43 0.0015 23.7 3.9 30 94-123 124-156 (226)
235 3s5j_B Ribose-phosphate pyroph 34.7 44 0.0015 25.4 4.1 45 94-138 212-266 (326)
236 1yzh_A TRNA (guanine-N(7)-)-me 34.7 66 0.0023 21.9 4.8 45 82-126 136-180 (214)
237 1jl3_A Arsenate reductase; alp 34.6 35 0.0012 22.2 3.1 35 96-130 4-39 (139)
238 2lpm_A Two-component response 34.4 58 0.002 20.6 4.2 36 97-132 10-45 (123)
239 1yks_A Genome polyprotein [con 34.3 34 0.0012 26.7 3.6 34 94-128 176-209 (440)
240 3mwy_W Chromo domain-containin 34.2 40 0.0014 28.6 4.1 39 92-131 569-607 (800)
241 2jbh_A Phosphoribosyltransfera 34.1 43 0.0015 23.7 3.8 31 94-124 133-166 (225)
242 3o7m_A Hypoxanthine phosphorib 34.1 46 0.0016 22.9 3.9 31 94-124 93-126 (186)
243 2b4a_A BH3024; flavodoxin-like 34.1 66 0.0022 19.7 4.4 39 94-133 14-52 (138)
244 3fmp_B ATP-dependent RNA helic 34.0 8.6 0.00029 30.2 0.0 38 94-132 332-369 (479)
245 2b49_A Protein tyrosine phosph 34.0 43 0.0015 24.6 3.9 29 83-111 194-226 (287)
246 1ecf_A Glutamine phosphoribosy 33.9 47 0.0016 26.7 4.3 33 94-126 358-393 (504)
247 3l9w_A Glutathione-regulated p 33.6 81 0.0028 24.6 5.6 45 99-144 7-54 (413)
248 1u2p_A Ptpase, low molecular w 33.6 20 0.00067 24.2 1.8 39 95-133 4-48 (163)
249 3rh0_A Arsenate reductase; oxi 33.5 41 0.0014 22.3 3.4 34 96-129 21-55 (148)
250 3mm4_A Histidine kinase homolo 33.5 61 0.0021 22.0 4.5 41 94-134 60-100 (206)
251 1fsg_A HGPRTASE, hypoxanthine- 33.3 46 0.0016 23.7 3.9 31 94-124 141-174 (233)
252 3dah_A Ribose-phosphate pyroph 33.3 50 0.0017 25.0 4.2 33 94-126 215-250 (319)
253 3q87_B N6 adenine specific DNA 33.0 83 0.0028 20.6 5.0 43 83-126 105-147 (170)
254 3l4b_C TRKA K+ channel protien 32.8 31 0.0011 23.8 2.8 29 99-128 3-31 (218)
255 1w30_A PYRR bifunctional prote 32.6 45 0.0015 23.1 3.6 31 94-124 111-145 (201)
256 2ehj_A Uracil phosphoribosyltr 32.5 43 0.0015 23.7 3.5 31 94-124 122-155 (208)
257 3eod_A Protein HNR; response r 32.5 73 0.0025 19.2 4.4 11 110-120 22-32 (130)
258 3s5p_A Ribose 5-phosphate isom 32.4 1.2E+02 0.0041 20.7 5.6 58 35-114 38-98 (166)
259 3n0a_A Tyrosine-protein phosph 32.2 1.7E+02 0.0058 22.4 7.9 81 34-120 50-142 (361)
260 1v9s_A Uracil phosphoribosyltr 32.1 39 0.0013 23.9 3.2 31 94-124 122-155 (208)
261 3fho_A ATP-dependent RNA helic 32.1 23 0.00078 28.2 2.2 37 94-131 356-392 (508)
262 1o54_A SAM-dependent O-methylt 31.9 18 0.00062 26.1 1.5 52 83-134 194-245 (277)
263 1lss_A TRK system potassium up 31.9 45 0.0015 20.7 3.3 28 100-128 8-35 (140)
264 2duw_A Putative COA-binding pr 31.8 42 0.0014 21.9 3.2 34 95-129 13-49 (145)
265 3lrt_A Ribose-phosphate pyroph 31.1 57 0.0019 24.2 4.1 31 94-124 202-235 (286)
266 3mb5_A SAM-dependent methyltra 31.1 28 0.00095 24.5 2.4 51 83-133 175-227 (255)
267 4dfc_B Uvrabc system protein A 30.6 44 0.0015 21.7 3.0 42 83-125 10-55 (126)
268 1jf8_A Arsenate reductase; ptp 30.5 45 0.0015 21.4 3.1 35 96-130 4-39 (131)
269 3oiy_A Reverse gyrase helicase 30.3 41 0.0014 25.6 3.3 34 95-129 252-286 (414)
270 2yxb_A Coenzyme B12-dependent 30.1 1.1E+02 0.0036 20.4 5.1 22 108-129 86-107 (161)
271 2pk3_A GDP-6-deoxy-D-LYXO-4-he 30.0 46 0.0016 24.1 3.5 33 93-126 10-42 (321)
272 2ji4_A Phosphoribosyl pyrophos 29.8 57 0.0019 25.3 4.1 32 94-125 271-305 (379)
273 1p6q_A CHEY2; chemotaxis, sign 29.8 77 0.0026 19.0 4.1 6 113-118 45-50 (129)
274 3grc_A Sensor protein, kinase; 29.5 86 0.0029 19.1 4.4 12 110-121 21-32 (140)
275 1p8a_A Protein tyrosine phosph 29.4 8.1 0.00028 25.6 -0.7 38 96-133 5-43 (146)
276 3t4e_A Quinate/shikimate dehyd 29.4 1.1E+02 0.0038 22.9 5.5 46 83-129 134-181 (312)
277 3c85_A Putative glutathione-re 29.3 45 0.0015 22.2 3.1 42 99-141 42-87 (183)
278 2ojl_A Hypothetical protein; B 29.2 41 0.0014 21.3 2.6 20 95-114 9-28 (108)
279 4etn_A LMPTP, low molecular we 29.2 15 0.0005 25.6 0.5 38 95-133 34-76 (184)
280 2l17_A Synarsc, arsenate reduc 29.2 54 0.0019 21.1 3.4 34 97-130 6-40 (134)
281 3o8q_A Shikimate 5-dehydrogena 29.0 1.1E+02 0.0037 22.5 5.3 46 83-129 112-159 (281)
282 3lte_A Response regulator; str 28.9 81 0.0028 18.9 4.1 8 113-120 44-51 (132)
283 4id9_A Short-chain dehydrogena 28.7 48 0.0016 24.4 3.4 32 94-126 18-49 (347)
284 2pln_A HP1043, response regula 28.7 88 0.003 19.0 4.3 35 94-129 17-51 (137)
285 3dmp_A Uracil phosphoribosyltr 28.6 69 0.0023 22.8 4.0 31 95-125 129-164 (217)
286 1z7g_A HGPRT, HGPRTASE, hypoxa 28.5 47 0.0016 23.3 3.2 31 94-124 125-158 (217)
287 1o1x_A Ribose-5-phosphate isom 28.5 1.4E+02 0.0047 20.2 5.7 58 34-113 28-88 (155)
288 2hmt_A YUAA protein; RCK, KTN, 28.5 54 0.0018 20.3 3.2 32 96-129 7-38 (144)
289 1u7z_A Coenzyme A biosynthesis 28.5 74 0.0025 22.8 4.2 24 104-128 33-56 (226)
290 3hdv_A Response regulator; PSI 28.4 96 0.0033 18.7 4.5 32 97-129 9-40 (136)
291 3jyo_A Quinate/shikimate dehyd 28.2 1.3E+02 0.0044 22.0 5.7 46 83-129 113-160 (283)
292 1z63_A Helicase of the SNF2/RA 28.2 48 0.0016 25.9 3.5 42 88-130 334-376 (500)
293 3h5i_A Response regulator/sens 28.2 83 0.0028 19.3 4.1 8 113-120 23-30 (140)
294 1cyd_A Carbonyl reductase; sho 28.1 64 0.0022 22.3 3.8 33 94-127 6-38 (244)
295 3dex_A SAV_2001; alpha-beta pr 28.0 45 0.0015 21.1 2.6 18 97-114 15-32 (107)
296 2v6i_A RNA helicase; membrane, 28.0 49 0.0017 25.7 3.5 35 95-130 171-205 (431)
297 2pwy_A TRNA (adenine-N(1)-)-me 28.0 24 0.00083 24.7 1.6 51 83-133 179-229 (258)
298 3fbt_A Chorismate mutase and s 27.9 1.4E+02 0.0047 22.0 5.8 46 83-129 108-155 (282)
299 1fuu_A Yeast initiation factor 27.8 13 0.00043 27.9 0.0 37 94-131 258-294 (394)
300 3dfz_A SIRC, precorrin-2 dehyd 27.8 55 0.0019 23.3 3.4 59 55-136 12-74 (223)
301 3qek_A NMDA glutamate receptor 27.7 63 0.0022 24.1 4.0 47 83-129 203-252 (384)
302 3gl9_A Response regulator; bet 27.6 90 0.0031 18.7 4.2 10 111-120 38-47 (122)
303 3tum_A Shikimate dehydrogenase 27.3 1.4E+02 0.0049 21.7 5.7 47 83-130 111-159 (269)
304 3gx8_A Monothiol glutaredoxin- 27.3 82 0.0028 19.8 3.9 38 83-121 4-47 (121)
305 3tnl_A Shikimate dehydrogenase 27.2 1.2E+02 0.0043 22.6 5.5 45 83-128 140-186 (315)
306 3f6p_A Transcriptional regulat 27.1 94 0.0032 18.5 4.2 12 110-121 37-48 (120)
307 3lap_A Arginine repressor; arg 27.0 59 0.002 22.3 3.3 26 92-117 143-168 (170)
308 2z1m_A GDP-D-mannose dehydrata 27.0 64 0.0022 23.4 3.8 31 95-126 3-33 (345)
309 1ccw_A Protein (glutamate muta 26.9 77 0.0026 20.4 3.8 20 110-129 73-92 (137)
310 3h8q_A Thioredoxin reductase 3 26.8 1E+02 0.0034 18.9 4.2 38 83-121 5-43 (114)
311 3cg4_A Response regulator rece 26.8 99 0.0034 18.8 4.3 9 112-120 24-32 (142)
312 1va0_A Uroporphyrin-III C-meth 26.7 1.7E+02 0.0057 20.5 8.5 108 26-140 11-122 (239)
313 2xij_A Methylmalonyl-COA mutas 26.6 1.2E+02 0.0039 26.1 5.6 56 82-140 645-710 (762)
314 3p9y_A CG14216, LD40846P; phos 26.5 84 0.0029 22.1 4.0 31 95-126 9-40 (198)
315 3mjd_A Orotate phosphoribosylt 26.2 72 0.0025 22.9 3.8 29 94-122 135-166 (232)
316 3zyw_A Glutaredoxin-3; metal b 26.1 1E+02 0.0034 19.0 4.1 38 83-121 4-47 (111)
317 8abp_A L-arabinose-binding pro 26.1 51 0.0017 23.5 3.1 29 98-126 199-229 (306)
318 2lqo_A Putative glutaredoxin R 26.1 95 0.0033 18.5 3.9 34 96-129 4-39 (92)
319 1hdo_A Biliverdin IX beta redu 26.0 82 0.0028 20.8 4.0 30 96-126 4-33 (206)
320 3ruf_A WBGU; rossmann fold, UD 26.0 97 0.0033 22.6 4.7 32 94-126 24-55 (351)
321 3he8_A Ribose-5-phosphate isom 25.9 1.5E+02 0.0052 19.8 5.8 58 35-114 17-77 (149)
322 4em8_A Ribose 5-phosphate isom 25.7 1.5E+02 0.0052 19.8 5.2 59 35-114 24-83 (148)
323 2z83_A Helicase/nucleoside tri 25.6 58 0.002 25.5 3.5 34 94-128 189-222 (459)
324 3t6k_A Response regulator rece 25.6 1.1E+02 0.0039 18.6 4.4 11 111-121 40-50 (136)
325 1y81_A Conserved hypothetical 25.5 96 0.0033 20.0 4.1 36 93-129 12-50 (138)
326 3vps_A TUNA, NAD-dependent epi 25.5 77 0.0026 22.7 4.0 32 95-127 7-38 (321)
327 3ipr_A PTS system, IIA compone 25.4 1.4E+02 0.005 19.5 5.0 46 83-128 43-96 (150)
328 2p4h_X Vestitone reductase; NA 25.4 76 0.0026 22.8 4.0 29 96-125 2-30 (322)
329 3vyw_A MNMC2; tRNA wobble urid 25.4 46 0.0016 25.1 2.7 43 81-128 205-247 (308)
330 1wch_A Protein tyrosine phosph 25.4 70 0.0024 23.9 3.8 18 93-110 237-255 (315)
331 2vvr_A Ribose-5-phosphate isom 25.0 1.6E+02 0.0054 19.7 5.8 59 34-114 17-78 (149)
332 1rpn_A GDP-mannose 4,6-dehydra 25.0 63 0.0022 23.5 3.5 33 93-126 12-44 (335)
333 4f11_A Gamma-aminobutyric acid 24.9 57 0.0019 24.8 3.3 46 84-129 195-243 (433)
334 3gt7_A Sensor protein; structu 24.9 92 0.0032 19.6 4.0 23 98-120 10-32 (154)
335 3pwz_A Shikimate dehydrogenase 24.9 1.4E+02 0.005 21.6 5.4 36 94-130 119-154 (272)
336 2wsb_A Galactitol dehydrogenas 24.8 75 0.0025 22.1 3.7 31 95-126 11-41 (254)
337 3d3w_A L-xylulose reductase; u 24.8 84 0.0029 21.7 4.0 33 94-127 6-38 (244)
338 3tla_A MCCF; serine protease, 24.7 86 0.003 24.2 4.2 30 92-121 40-76 (371)
339 3q2o_A Phosphoribosylaminoimid 24.7 73 0.0025 24.1 3.9 33 93-127 12-44 (389)
340 3i42_A Response regulator rece 24.6 95 0.0033 18.5 3.9 13 109-121 37-49 (127)
341 3lfh_A Manxa, phosphotransfera 24.5 74 0.0025 20.9 3.4 44 83-128 45-93 (144)
342 1d1q_A Tyrosine phosphatase (E 24.5 23 0.00079 23.7 0.8 39 95-133 7-52 (161)
343 4b4o_A Epimerase family protei 24.4 66 0.0023 23.1 3.4 28 98-126 3-30 (298)
344 3awd_A GOX2181, putative polyo 24.3 77 0.0026 22.1 3.7 30 95-125 13-42 (260)
345 2p0g_A Selenoprotein W-related 24.2 58 0.002 20.5 2.6 18 97-114 6-23 (105)
346 3ph3_A Ribose-5-phosphate isom 24.2 1.7E+02 0.006 19.9 5.6 58 35-114 37-97 (169)
347 2wv9_A Flavivirin protease NS2 24.1 62 0.0021 27.1 3.5 36 93-129 408-443 (673)
348 2der_A TRNA-specific 2-thiouri 24.1 78 0.0027 24.4 3.9 28 94-121 16-43 (380)
349 2jlq_A Serine protease subunit 24.0 60 0.002 25.3 3.3 38 94-132 187-224 (451)
350 3b7o_A Tyrosine-protein phosph 23.9 88 0.003 23.4 4.1 18 93-110 237-255 (316)
351 3sr3_A Microcin immunity prote 23.9 72 0.0025 24.1 3.6 30 92-121 10-46 (336)
352 1bd3_D Uprtase, uracil phospho 23.7 65 0.0022 23.4 3.2 31 94-124 155-190 (243)
353 3r4v_A Putative uncharacterize 23.7 1.4E+02 0.0047 22.6 5.0 42 87-128 73-119 (315)
354 2fca_A TRNA (guanine-N(7)-)-me 23.7 1.2E+02 0.004 20.7 4.5 44 82-125 133-176 (213)
355 2yv1_A Succinyl-COA ligase [AD 23.7 85 0.0029 23.2 3.9 39 90-128 8-46 (294)
356 2ydy_A Methionine adenosyltran 23.4 76 0.0026 22.8 3.6 30 96-126 3-32 (315)
357 1k92_A Argininosuccinate synth 23.4 88 0.003 24.9 4.1 29 93-121 8-36 (455)
358 1y1p_A ARII, aldehyde reductas 23.4 89 0.003 22.6 4.0 32 94-126 10-41 (342)
359 2kok_A Arsenate reductase; bru 23.4 65 0.0022 20.2 2.9 25 97-121 6-31 (120)
360 3don_A Shikimate dehydrogenase 23.3 82 0.0028 23.1 3.7 44 83-127 103-148 (277)
361 1o5i_A 3-oxoacyl-(acyl carrier 23.3 86 0.003 22.0 3.8 32 94-126 18-49 (249)
362 4e4t_A Phosphoribosylaminoimid 23.3 96 0.0033 24.0 4.3 35 92-128 32-66 (419)
363 1rw1_A Conserved hypothetical 23.3 82 0.0028 19.5 3.3 24 98-121 2-26 (114)
364 1k66_A Phytochrome response re 23.3 1.3E+02 0.0045 18.3 4.4 23 98-120 9-31 (149)
365 3oz2_A Digeranylgeranylglycero 23.0 80 0.0027 23.2 3.7 28 99-127 7-34 (397)
366 2zay_A Response regulator rece 23.0 96 0.0033 19.1 3.7 23 98-120 11-33 (147)
367 3orq_A N5-carboxyaminoimidazol 23.0 92 0.0031 23.6 4.1 33 93-127 10-42 (377)
368 1mvo_A PHOP response regulator 22.9 1.2E+02 0.0042 18.2 4.2 10 112-121 40-49 (136)
369 1lh0_A OMP synthase; loop clos 22.8 1E+02 0.0035 21.4 4.1 29 94-123 117-148 (213)
370 1req_A Methylmalonyl-COA mutas 22.8 1.7E+02 0.0057 24.9 5.9 56 82-140 637-702 (727)
371 1tmy_A CHEY protein, TMY; chem 22.7 1.2E+02 0.0042 17.7 4.2 24 95-121 26-49 (120)
372 1xg5_A ARPG836; short chain de 22.7 94 0.0032 22.1 4.0 31 95-126 32-62 (279)
373 1o57_A PUR operon repressor; p 22.7 61 0.0021 24.0 2.9 31 93-123 194-227 (291)
374 1ci4_A Protein (barrier-TO-aut 22.7 20 0.00067 22.0 0.2 25 106-130 25-49 (89)
375 1oi7_A Succinyl-COA synthetase 22.7 87 0.003 23.0 3.8 37 92-128 4-40 (288)
376 2gi4_A Possible phosphotyrosin 22.6 21 0.00071 23.9 0.3 37 97-133 3-45 (156)
377 1t1v_A SH3BGRL3, SH3 domain-bi 22.5 1.2E+02 0.004 17.6 3.8 25 97-121 3-34 (93)
378 1p9o_A Phosphopantothenoylcyst 22.5 55 0.0019 24.7 2.7 24 105-129 65-88 (313)
379 4e5s_A MCCFLIKE protein (BA_56 22.5 1.1E+02 0.0038 23.1 4.4 30 92-121 9-45 (331)
380 2eyq_A TRCF, transcription-rep 22.4 1.3E+02 0.0043 27.0 5.3 46 85-131 802-849 (1151)
381 2vvp_A Ribose-5-phosphate isom 22.4 1.9E+02 0.0064 19.6 5.7 59 35-114 20-81 (162)
382 3ono_A Ribose/galactose isomer 22.4 2.1E+02 0.0073 20.3 5.6 60 34-114 23-86 (214)
383 3fg2_P Putative rubredoxin red 22.3 98 0.0034 23.4 4.2 32 96-128 2-34 (404)
384 3jvi_A Protein tyrosine phosph 22.2 31 0.0011 23.2 1.1 38 96-133 5-48 (161)
385 1mb3_A Cell division response 22.2 1.3E+02 0.0044 17.7 4.2 12 110-121 36-47 (124)
386 3gbv_A Putative LACI-family tr 22.2 1.4E+02 0.0048 21.0 4.8 30 96-126 200-229 (304)
387 4hb9_A Similarities with proba 22.2 78 0.0027 23.5 3.5 28 99-127 4-31 (412)
388 2gn4_A FLAA1 protein, UDP-GLCN 22.2 76 0.0026 23.6 3.5 36 94-129 20-56 (344)
389 2oyc_A PLP phosphatase, pyrido 22.2 2.2E+02 0.0075 20.4 7.1 76 25-121 3-80 (306)
390 1l3i_A Precorrin-6Y methyltran 22.2 63 0.0022 21.0 2.8 38 83-120 115-152 (192)
391 3qmx_A Glutaredoxin A, glutare 22.1 99 0.0034 18.5 3.4 27 95-121 15-42 (99)
392 2rjn_A Response regulator rece 22.1 1.2E+02 0.004 18.9 4.0 12 109-120 21-32 (154)
393 2gas_A Isoflavone reductase; N 22.1 98 0.0034 22.1 4.0 29 96-125 3-31 (307)
394 3n8i_A Low molecular weight ph 22.1 25 0.00085 23.6 0.6 39 95-133 5-49 (157)
395 2bgk_A Rhizome secoisolaricire 22.0 99 0.0034 21.7 4.0 32 94-126 15-46 (278)
396 4gl2_A Interferon-induced heli 21.9 56 0.0019 26.8 2.8 34 95-129 400-439 (699)
397 1qkk_A DCTD, C4-dicarboxylate 21.6 1.2E+02 0.0041 18.9 4.0 35 97-132 5-39 (155)
398 1yb1_A 17-beta-hydroxysteroid 21.6 92 0.0031 22.1 3.7 31 95-126 31-61 (272)
399 3ew7_A LMO0794 protein; Q8Y8U8 21.6 86 0.0029 21.0 3.4 29 97-126 2-30 (221)
400 3ozf_A Hypoxanthine-guanine-xa 21.6 86 0.003 22.8 3.5 31 94-124 155-188 (250)
401 3q58_A N-acetylmannosamine-6-p 21.5 2.2E+02 0.0075 20.1 5.7 88 32-125 117-209 (229)
402 3pkz_A Recombinase SIN; small 21.5 1.6E+02 0.0053 18.4 4.9 49 80-130 42-95 (124)
403 3f9i_A 3-oxoacyl-[acyl-carrier 21.5 70 0.0024 22.3 3.0 32 94-126 13-44 (249)
404 2r25_B Osmosensing histidine p 21.4 1.5E+02 0.005 18.0 4.5 13 98-110 29-41 (133)
405 4ffl_A PYLC; amino acid, biosy 21.3 88 0.003 23.3 3.7 28 97-126 3-30 (363)
406 3ai3_A NADPH-sorbose reductase 21.2 1E+02 0.0034 21.7 3.8 27 95-121 7-33 (263)
407 1qyd_A Pinoresinol-lariciresin 21.2 1.2E+02 0.004 21.7 4.2 30 96-126 5-34 (313)
408 3vot_A L-amino acid ligase, BL 21.2 72 0.0024 24.5 3.2 29 93-122 3-31 (425)
409 1byk_A Protein (trehalose oper 21.2 90 0.0031 21.5 3.5 31 96-126 172-202 (255)
410 2qxy_A Response regulator; reg 21.1 1.1E+02 0.0038 18.6 3.7 11 111-121 40-50 (142)
411 2fa8_A Hypothetical protein AT 21.1 73 0.0025 20.0 2.6 19 95-113 8-26 (105)
412 4gxt_A A conserved functionall 21.1 58 0.002 25.1 2.6 27 108-135 226-252 (385)
413 1fpr_A Protein-tyrosine phosph 21.0 93 0.0032 22.7 3.7 18 93-110 202-220 (284)
414 2whx_A Serine protease/ntpase/ 21.0 77 0.0026 26.1 3.5 35 94-129 354-388 (618)
415 1qyc_A Phenylcoumaran benzylic 20.9 1.2E+02 0.0041 21.6 4.2 30 96-126 5-34 (308)
416 3dhn_A NAD-dependent epimerase 20.9 70 0.0024 21.7 2.8 31 96-127 5-35 (227)
417 2z5l_A Tylkr1, tylactone synth 20.8 1.1E+02 0.0036 24.6 4.2 34 93-126 257-290 (511)
418 3heb_A Response regulator rece 20.8 1.4E+02 0.0049 18.4 4.2 34 98-131 7-41 (152)
419 3vrd_B FCCB subunit, flavocyto 20.8 95 0.0032 23.3 3.8 32 95-127 2-34 (401)
420 3k7p_A Ribose 5-phosphate isom 20.6 2.2E+02 0.0074 19.7 5.3 59 34-114 38-101 (179)
421 1pqw_A Polyketide synthase; ro 20.6 72 0.0025 21.4 2.8 36 92-128 36-71 (198)
422 3hv2_A Response regulator/HD d 20.6 1.1E+02 0.0038 19.1 3.6 10 112-121 51-60 (153)
423 2o23_A HADH2 protein; HSD17B10 20.5 1.1E+02 0.0036 21.4 3.8 27 95-121 12-38 (265)
424 3a2k_A TRNA(Ile)-lysidine synt 20.5 1.6E+02 0.0056 23.1 5.2 39 83-121 4-48 (464)
425 2ae2_A Protein (tropinone redu 20.5 1.1E+02 0.0036 21.6 3.8 27 95-121 9-35 (260)
426 2e0n_A Precorrin-2 C20-methylt 20.4 2.4E+02 0.008 20.0 6.0 59 83-142 84-149 (259)
427 3s3e_A Tyrosine-protein phosph 20.3 99 0.0034 23.0 3.7 18 93-110 233-251 (307)
428 3t38_A Arsenate reductase; low 20.3 82 0.0028 22.3 3.1 37 94-130 80-117 (213)
429 2qy6_A UPF0209 protein YFCK; s 20.3 47 0.0016 24.1 1.8 43 81-128 192-234 (257)
430 2ooq_A Receptor-type tyrosine- 20.3 99 0.0034 22.6 3.7 17 94-110 211-228 (286)
431 2pd6_A Estradiol 17-beta-dehyd 20.3 1.1E+02 0.0037 21.3 3.8 31 95-126 7-37 (264)
432 2rkb_A Serine dehydratase-like 20.2 1.4E+02 0.0046 22.0 4.5 61 70-130 28-88 (318)
433 1w6u_A 2,4-dienoyl-COA reducta 20.2 1E+02 0.0034 22.1 3.7 31 95-126 26-56 (302)
434 1i4n_A Indole-3-glycerol phosp 20.2 1.7E+02 0.0059 21.1 4.9 86 31-121 134-225 (251)
435 3v4g_A Arginine repressor; vib 20.2 90 0.0031 21.6 3.2 26 92-117 149-174 (180)
436 3sm9_A Mglur3, metabotropic gl 20.2 1.7E+02 0.0058 22.8 5.3 48 83-130 230-278 (479)
437 1dhr_A Dihydropteridine reduct 20.1 99 0.0034 21.4 3.5 31 94-125 6-36 (241)
438 1rkx_A CDP-glucose-4,6-dehydra 20.1 99 0.0034 22.7 3.7 32 94-126 8-39 (357)
439 3ak4_A NADH-dependent quinucli 20.1 1E+02 0.0036 21.6 3.7 32 94-126 11-42 (263)
440 2dtx_A Glucose 1-dehydrogenase 20.1 1.1E+02 0.0037 21.7 3.8 32 94-126 7-38 (264)
441 2ppw_A Conserved domain protei 20.1 2.4E+02 0.0083 20.0 5.6 61 34-113 23-86 (216)
442 1z3i_X Similar to RAD54-like; 20.1 75 0.0026 26.2 3.2 37 93-130 414-450 (644)
443 2aef_A Calcium-gated potassium 20.0 44 0.0015 23.3 1.6 28 99-128 12-39 (234)
444 3ngx_A Bifunctional protein fo 20.0 2.2E+02 0.0074 21.1 5.4 33 94-127 149-181 (276)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.95 E-value=8.9e-29 Score=162.80 Aligned_cols=99 Identities=29% Similarity=0.408 Sum_probs=87.4
Q ss_pred eeecHHHHHHHHhC--CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCc
Q 031788 29 ITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 106 (153)
Q Consensus 29 ~~i~~~~~~~~~~~--~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~ 106 (153)
.+||++|+.+.+.+ +.+|||||++.||..|||||| +|||+. +|.+.+.+ ++++++||+||.+|.
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivv~C~~G~ 67 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNA--KLIPMD-----------TIPDNLNS-FNKNEIYYIVCAGGV 67 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTC--EECCGG-----------GGGGCGGG-CCTTSEEEEECSSSS
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCc--ccCccc-----------chhhhhhh-hcCCCeEEEECCCCH
Confidence 57999999998864 388999999999999999999 999996 44444444 489999999999999
Q ss_pred cHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 031788 107 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 142 (153)
Q Consensus 107 ~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~ 142 (153)
||..+++.|.+.||+++ .|.||+.+|.++|+|+++
T Consensus 68 rS~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 68 RSAKVVEYLEANGIDAV-NVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHHHTTTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHHHcCCCEE-EecChHHHHHHCCCccee
Confidence 99999999999999865 689999999999999975
No 2
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.95 E-value=4.2e-28 Score=165.45 Aligned_cols=116 Identities=48% Similarity=0.763 Sum_probs=101.5
Q ss_pred cCCcceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeC
Q 031788 24 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ 103 (153)
Q Consensus 24 ~~~~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~ 103 (153)
.......|+++++.++++++.+|||||++.||..|||||| +|||+..+...+.+..+++.+.+.+.++++++||+||+
T Consensus 13 ~~~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgA--inip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~ 90 (129)
T 1tq1_A 13 ESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGA--INVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQ 90 (129)
T ss_dssp CSCCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTB--EECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEES
T ss_pred hcCCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCc--EECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECC
Confidence 4556789999999999886789999999999999999999 99999665444555555777776665789999999999
Q ss_pred CCccHHHHHHHHHHCCccceeeccccHHHHHhCCCcee
Q 031788 104 SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 141 (153)
Q Consensus 104 ~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~ 141 (153)
+|.||..+++.|.+.||+||+.|.||+.+|.++|+|++
T Consensus 91 ~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 91 SGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp SCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred CCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999985
No 3
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.95 E-value=7.7e-28 Score=159.46 Aligned_cols=105 Identities=24% Similarity=0.408 Sum_probs=92.6
Q ss_pred cceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCc
Q 031788 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 106 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~ 106 (153)
.+..|+++++.+++++ .+|||||++.||..|||||| +|+|+. ++.+.+..+ +++++||+||++|.
T Consensus 2 ~~~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~l-~~~~~ivvyC~~G~ 66 (108)
T 3gk5_A 2 YYRSINAADLYENIKA-YTVLDVREPFELIFGSIANS--INIPIS-----------ELREKWKIL-ERDKKYAVICAHGN 66 (108)
T ss_dssp -CCEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTC--EECCHH-----------HHHHHGGGS-CTTSCEEEECSSSH
T ss_pred cccEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCC--EEcCHH-----------HHHHHHHhC-CCCCeEEEEcCCCc
Confidence 3578999999999887 99999999999999999999 999996 676666554 88999999999999
Q ss_pred cHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCCC
Q 031788 107 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPA 147 (153)
Q Consensus 107 ~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~~ 147 (153)
||..+++.|.+.|| +|++|.||+.+|.++|.|+++..+.+
T Consensus 67 rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~~~ 106 (108)
T 3gk5_A 67 RSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHHHH 106 (108)
T ss_dssp HHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC----
T ss_pred HHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCCCc
Confidence 99999999999999 99999999999999999998877643
No 4
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.94 E-value=2.6e-27 Score=156.68 Aligned_cols=104 Identities=23% Similarity=0.356 Sum_probs=94.0
Q ss_pred CcceeecHHHHHHHHhC-CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 26 AEVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
..+..|+++++.+++++ +.+|||||++.||..|||||| +|+|+. ++.+.+.+ ++++++||+||++
T Consensus 2 ~~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivvyc~~ 67 (108)
T 1gmx_A 2 DQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQA--FHLTND-----------TLGAFMRD-NDFDTPVMVMCYH 67 (108)
T ss_dssp CSCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTC--EECCHH-----------HHHHHHHH-SCTTSCEEEECSS
T ss_pred CcccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccC--EeCCHH-----------HHHHHHHh-cCCCCCEEEEcCC
Confidence 45788999999999876 489999999999999999999 999996 66666666 4899999999999
Q ss_pred CccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 031788 105 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 144 (153)
Q Consensus 105 g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~ 144 (153)
|.+|..+++.|...||+||++|.||+.+|.+. +|++.+.
T Consensus 68 g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~~ 106 (108)
T 1gmx_A 68 GNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY 106 (108)
T ss_dssp SSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred CchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccccc
Confidence 99999999999999999999999999999999 9987654
No 5
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.94 E-value=1.4e-27 Score=156.74 Aligned_cols=99 Identities=28% Similarity=0.395 Sum_probs=88.0
Q ss_pred eeecHHHHHHHHh--CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCc
Q 031788 29 ITVDVRAAKNLLE--SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 106 (153)
Q Consensus 29 ~~i~~~~~~~~~~--~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~ 106 (153)
..|+++++.++++ ++.+|||||++.||..|||||| +|+|+. ++.+.+.. ++++++||+||++|.
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~iv~yC~~g~ 67 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNA--KLIPMD-----------TIPDNLNS-FNKNEIYYIVCAGGV 67 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTC--EECCGG-----------GGGGCGGG-CCTTSEEEEECSSSS
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCC--EEcCHH-----------HHHHHHHh-CCCCCeEEEECCCCh
Confidence 5799999999884 3489999999999999999999 999996 44444444 488999999999999
Q ss_pred cHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 031788 107 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 142 (153)
Q Consensus 107 ~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~ 142 (153)
+|..+++.|...|| +|++|.||+.+|.++|+|+++
T Consensus 68 rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 68 RSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 99999999999999 899999999999999999875
No 6
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.94 E-value=1.4e-27 Score=156.08 Aligned_cols=97 Identities=23% Similarity=0.335 Sum_probs=86.2
Q ss_pred eeecHHHHHHHHh--CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCc
Q 031788 29 ITVDVRAAKNLLE--SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 106 (153)
Q Consensus 29 ~~i~~~~~~~~~~--~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~ 106 (153)
..|+++++.++++ ++.+|||||++.||..|||||| +|+|+. ++.+.+.+ ++++++||+||++|.
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivvyC~~g~ 67 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGA--ETIPMN-----------SIPDNLNY-FNDNETYYIICKAGG 67 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTC--EECCGG-----------GGGGCGGG-SCTTSEEEEECSSSH
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHHh-CCCCCcEEEEcCCCc
Confidence 5799999999884 3489999999999999999999 999996 44344444 478999999999999
Q ss_pred cHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 031788 107 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 140 (153)
Q Consensus 107 ~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~ 140 (153)
+|..+++.|.+.|| +|++|.||+.+|.++|+|+
T Consensus 68 rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 68 RSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred hHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 99999999999999 9999999999999999985
No 7
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.94 E-value=1.9e-26 Score=158.80 Aligned_cols=112 Identities=27% Similarity=0.410 Sum_probs=96.9
Q ss_pred cCCcceeecHHHHHHHHh-C-CCeEEecCChhhhhc-CC--CCCcceeCccccccCCCCCCCChHHHH--HHHhhccCCC
Q 031788 24 SGAEVITVDVRAAKNLLE-S-GYGYLDVRTAEEFKE-GH--VDAAKIFNIPYMFNTPEGRVKNPDFLK--KVRSLCKEED 96 (153)
Q Consensus 24 ~~~~~~~i~~~~~~~~~~-~-~~~iIDvR~~~e~~~-gh--i~ga~~i~ip~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 96 (153)
.......|+++++.++++ + +.+|||||++.||.. || |||| +|||+. ++.. .+.. +++++
T Consensus 18 ~~~~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgA--inip~~-----------~l~~~~~~~~-l~~~~ 83 (137)
T 1qxn_A 18 AKADMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNY--KHMSRG-----------KLEPLLAKSG-LDPEK 83 (137)
T ss_dssp HHHSSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSE--EECCTT-----------TSHHHHHHHC-CCTTS
T ss_pred hhccCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCC--EEcchH-----------HhhhHHhhcc-CCCCC
Confidence 345678999999999997 5 489999999999999 99 9999 999995 2222 3333 58899
Q ss_pred eEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCCCCC
Q 031788 97 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPADH 149 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~~~~ 149 (153)
+||+||++|.||..+++.|.+.||+||++|.||+.+|.++|+|++++.++-.|
T Consensus 84 ~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~ 136 (137)
T 1qxn_A 84 PVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSHHHHH 136 (137)
T ss_dssp CEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCCCCCC
T ss_pred eEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccccccccC
Confidence 99999999999999999999999999999999999999999999987765443
No 8
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.1e-26 Score=160.03 Aligned_cols=117 Identities=21% Similarity=0.319 Sum_probs=96.0
Q ss_pred cCCcceeecHHHHHHHHh---CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh-ccCCCeEE
Q 031788 24 SGAEVITVDVRAAKNLLE---SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLV 99 (153)
Q Consensus 24 ~~~~~~~i~~~~~~~~~~---~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv 99 (153)
.......|+++++.++++ .+.+|||||++.||..|||||| +|+|+..+.........+|.+.+... ++++++||
T Consensus 18 ~~~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--inip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~iv 95 (139)
T 3d1p_A 18 NVSNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPAS--INVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELI 95 (139)
T ss_dssp --CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTC--EECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEE
T ss_pred CCCCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCc--EEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEE
Confidence 345678999999999986 3478999999999999999999 99999765322222223455555433 67899999
Q ss_pred EEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 031788 100 VGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 142 (153)
Q Consensus 100 i~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~ 142 (153)
+||.+|.||..+++.|.+.||+||++|.||+.+|.+.|+|+..
T Consensus 96 vyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 96 FYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp EECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred EECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999999999753
No 9
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.94 E-value=7.3e-27 Score=154.21 Aligned_cols=100 Identities=27% Similarity=0.434 Sum_probs=83.4
Q ss_pred HHHHHHh---CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCccHHHH
Q 031788 35 AAKNLLE---SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHA 111 (153)
Q Consensus 35 ~~~~~~~---~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~ 111 (153)
++.++++ .+.+|||||++.||..|||||| +|+|+. ++.+.+.+.++++++||+||.+|.+|..+
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a 68 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGA--MAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQA 68 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTC--EECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCC--EeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHH
Confidence 4566665 2389999999999999999999 999996 67666655568999999999999999999
Q ss_pred HHHHHHCCccceeeccccHHHHHhCCCceecCCCCC
Q 031788 112 TADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPA 147 (153)
Q Consensus 112 ~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~~ 147 (153)
++.|...||+||++|.||+.+|.++|+|+++..+.+
T Consensus 69 ~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~~~ 104 (106)
T 3hix_A 69 VNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHHHH 104 (106)
T ss_dssp HHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCEEE
T ss_pred HHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCCCC
Confidence 999999999999999999999999999998876543
No 10
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.94 E-value=1.2e-26 Score=160.61 Aligned_cols=102 Identities=27% Similarity=0.423 Sum_probs=92.5
Q ss_pred ecHHHHHHHHhC---CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCcc
Q 031788 31 VDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGAR 107 (153)
Q Consensus 31 i~~~~~~~~~~~---~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~~ 107 (153)
|+++++.+++++ +.+|||||++.||..|||||| +|+|+. ++.+.+...++++++||+||++|.+
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~r 68 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGA--MAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQ 68 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTC--EECCGG-----------GHHHHHHTTSCTTSEEEEECSSHHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCC--EEcCHH-----------HHHHHHHhcCCCCCeEEEEECCChH
Confidence 789999999973 378999999999999999999 999996 6777665557899999999999999
Q ss_pred HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 108 SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 108 a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
|..+++.|...||+||++|.||+.+|.++|+|+++..+
T Consensus 69 s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 106 (141)
T 3ilm_A 69 TSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIE 106 (141)
T ss_dssp HHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred HHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence 99999999999999999999999999999999998764
No 11
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.94 E-value=2.5e-26 Score=158.13 Aligned_cols=110 Identities=22% Similarity=0.343 Sum_probs=91.1
Q ss_pred CCcceeecHHHHHHHHh--C-CCeEEecCChhhhhc-CCCCCcceeCccccccCCCCCCCChHHHHHHH-------hhcc
Q 031788 25 GAEVITVDVRAAKNLLE--S-GYGYLDVRTAEEFKE-GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR-------SLCK 93 (153)
Q Consensus 25 ~~~~~~i~~~~~~~~~~--~-~~~iIDvR~~~e~~~-ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~-------~~~~ 93 (153)
......|+++++.++++ + +.+|||||++.||.. |||||| +|+|+. ++...+. ..++
T Consensus 18 ~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA--~~ip~~-----------~l~~~~~~~~~~~~~~~~ 84 (139)
T 2hhg_A 18 NSSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGS--FSCTRG-----------MLEFWIDPQSPYAKPIFQ 84 (139)
T ss_dssp HTTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTC--EECCGG-----------GHHHHHCTTSTTCCGGGG
T ss_pred HHhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCe--EECChH-----------HHHHhcCccchhhhccCC
Confidence 45678999999999997 4 478999999999999 999999 999996 3333222 1247
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCCC
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPA 147 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~~ 147 (153)
++++||+||++|.+|..+++.|+..||+||++|.||+.+|.++|+|++++.+++
T Consensus 85 ~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~ 138 (139)
T 2hhg_A 85 EDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAPKK 138 (139)
T ss_dssp SSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC------
T ss_pred CCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCCCC
Confidence 899999999999999999999999999999999999999999999999876543
No 12
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.92 E-value=4.4e-26 Score=151.38 Aligned_cols=102 Identities=20% Similarity=0.327 Sum_probs=87.8
Q ss_pred cceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh-ccCCCeEEEEeCCC
Q 031788 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSG 105 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ivi~c~~g 105 (153)
....|+++++ .+++.+|||||++.||..|||||| +|+|+. ++.+.+... ++++++||+||++|
T Consensus 3 ~~~~is~~el---~~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~~~~~~~~ivvyC~~G 66 (110)
T 2k0z_A 3 EDYAISLEEV---NFNDFIVVDVRELDEYEELHLPNA--TLISVN-----------DQEKLADFLSQHKDKKVLLHCRAG 66 (110)
T ss_dssp TTTEEETTTC---CGGGSEEEEEECHHHHHHSBCTTE--EEEETT-----------CHHHHHHHHHSCSSSCEEEECSSS
T ss_pred ceeeeCHHHh---ccCCeEEEECCCHHHHhcCcCCCC--EEcCHH-----------HHHHHHHhcccCCCCEEEEEeCCC
Confidence 3456777776 234589999999999999999999 999996 555555543 68999999999999
Q ss_pred ccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 106 ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 106 ~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
.||..+++.|...||++ ++|.||+.+|.++|+|++++..
T Consensus 67 ~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~~ 105 (110)
T 2k0z_A 67 RRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDDT 105 (110)
T ss_dssp HHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCCS
T ss_pred chHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCCC
Confidence 99999999999999999 9999999999999999987664
No 13
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.92 E-value=2.6e-25 Score=154.30 Aligned_cols=105 Identities=23% Similarity=0.311 Sum_probs=89.5
Q ss_pred eeecHHHHHHHHhCC---CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCC
Q 031788 29 ITVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 105 (153)
Q Consensus 29 ~~i~~~~~~~~~~~~---~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g 105 (153)
..|+++++.++++++ .+|||||++.||..|||||| +|+|+..+.. +.+. .++++++||+||.+|
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgA--inip~~~l~~----------~~~~-~l~~~~~ivvyC~~g 82 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTA--ISIPGNKINE----------DTTK-RLSKEKVIITYCWGP 82 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTC--EECCGGGCST----------TTTT-TCCTTSEEEEECSCT
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCC--EECCHHHHhH----------HHHh-hCCCCCeEEEEECCC
Confidence 568999999999753 78999999999999999999 9999964321 0111 257899999999988
Q ss_pred --ccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCCC
Q 031788 106 --ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPA 147 (153)
Q Consensus 106 --~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~~ 147 (153)
.+|..+++.|+..|| +|++|.||+.+|.++|+|++++.+..
T Consensus 83 ~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~~~ 125 (144)
T 3nhv_A 83 ACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLGAK 125 (144)
T ss_dssp TCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSGGG
T ss_pred CccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCCCC
Confidence 699999999999999 59999999999999999999876533
No 14
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.92 E-value=4.4e-26 Score=147.28 Aligned_cols=93 Identities=26% Similarity=0.247 Sum_probs=77.0
Q ss_pred eeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCccH
Q 031788 29 ITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARS 108 (153)
Q Consensus 29 ~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~~a 108 (153)
..|+++++.++++++.+|||||++.||..|||||| +|+|+. ++.+.+.+ +++ ++||+||++|.+|
T Consensus 2 ~~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gA--i~ip~~-----------~l~~~~~~-l~~-~~ivvyC~~g~rs 66 (94)
T 1wv9_A 2 RKVRPEELPALLEEGVLVVDVRPADRRSTPLPFAA--EWVPLE-----------KIQKGEHG-LPR-RPLLLVCEKGLLS 66 (94)
T ss_dssp CEECGGGHHHHHHTTCEEEECCCC--CCSCCSSCC--EECCHH-----------HHTTTCCC-CCS-SCEEEECSSSHHH
T ss_pred CcCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCC--EECCHH-----------HHHHHHHh-CCC-CCEEEEcCCCChH
Confidence 57899999999887889999999999999999999 999996 33333333 467 9999999999999
Q ss_pred HHHHHHHHHCCccceeeccccHHHHHhCC
Q 031788 109 LHATADLLGAGFKHVSNFGGGHMAWVQNG 137 (153)
Q Consensus 109 ~~~~~~L~~~G~~~v~~l~gG~~~w~~~g 137 (153)
..+++.|...||+ |++|.||+.+|.++|
T Consensus 67 ~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 67 QVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred HHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 9999999999999 999999999998765
No 15
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.92 E-value=5.6e-25 Score=148.93 Aligned_cols=101 Identities=23% Similarity=0.339 Sum_probs=89.1
Q ss_pred eeecHHHHHHHHhCC---CeEEecCChhhh-hcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 29 ITVDVRAAKNLLESG---YGYLDVRTAEEF-KEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 29 ~~i~~~~~~~~~~~~---~~iIDvR~~~e~-~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
..|+++++.++++++ .+|||||++.|| ..|||||| +|||+. ++.+.+.. ++++++||+||++
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA--~nip~~-----------~l~~~~~~-l~~~~~ivvyC~~ 80 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGA--IAMPAK-----------DLATRIGE-LDPAKTYVVYDWT 80 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTC--EECCHH-----------HHHHHGGG-SCTTSEEEEECSS
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCC--EECCHH-----------HHHHHHhc-CCCCCeEEEEeCC
Confidence 579999999998742 789999999998 99999999 999996 66666655 4889999999999
Q ss_pred Ccc--HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 031788 105 GAR--SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 144 (153)
Q Consensus 105 g~~--a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~ 144 (153)
|.+ |..+++.|...||+ |++|.||+.+|..+|.|..+..
T Consensus 81 g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~~ 121 (124)
T 3flh_A 81 GGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHHH 121 (124)
T ss_dssp SSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred CCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence 998 89999999999997 9999999999999999987653
No 16
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.91 E-value=1.9e-24 Score=150.45 Aligned_cols=115 Identities=23% Similarity=0.317 Sum_probs=91.4
Q ss_pred CcceeecHHHHHHHHhC--CCeEEecCChhhhhc-CCC------CCcceeCccccccCCCCCCCChHHHHHHHhh-----
Q 031788 26 AEVITVDVRAAKNLLES--GYGYLDVRTAEEFKE-GHV------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL----- 91 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~--~~~iIDvR~~~e~~~-ghi------~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~----- 91 (153)
+....|+++++.+++++ +.+|||||++.||.. ||| ||| +|+|+.. ..... .++|.+.+.+.
T Consensus 2 ~~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgA--v~ip~~~--~~~~~-~~~~~~~l~~~l~~~~ 76 (148)
T 2fsx_A 2 SYAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREV--VYVEWAT--SDGTH-NDNFLAELRDRIPADA 76 (148)
T ss_dssp CCSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCC--EECCSBC--TTSCB-CTTHHHHHHHHCC---
T ss_pred CccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCc--EEeeeec--ccccc-CHHHHHHHHHHHhhcc
Confidence 35678999999999873 589999999999997 999 999 9999975 11111 23455555543
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH------------HHHHhCCCceecCCC
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH------------MAWVQNGLKVKAREK 145 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~------------~~w~~~g~~~~~~~~ 145 (153)
++++++||+||++|.||..+++.|...||+||++|.||+ .+|+++|+|++....
T Consensus 77 ~~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~~ 142 (148)
T 2fsx_A 77 DQHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGRS 142 (148)
T ss_dssp ----CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC--
T ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCcccc
Confidence 378999999999999999999999999999999999999 689999999987654
No 17
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.90 E-value=3.7e-24 Score=146.69 Aligned_cols=114 Identities=21% Similarity=0.265 Sum_probs=94.0
Q ss_pred cceeecHHHHHHHHh-C-CCeEEecCChhhhhc-CCC------CCcceeCccccccCCCCCCCChHHHHHHHhhc--cCC
Q 031788 27 EVITVDVRAAKNLLE-S-GYGYLDVRTAEEFKE-GHV------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEE 95 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~-~-~~~iIDvR~~~e~~~-ghi------~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~--~~~ 95 (153)
....|+++++.++++ + +.+|||||++.||.. +|+ ||| +|||+... ..++|.+.+.+.. +++
T Consensus 3 ~~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga--~~ip~~~~------~~~~~~~~l~~~~~~~~~ 74 (134)
T 1vee_A 3 SGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKA--VSTVYNGE------DKPGFLKKLSLKFKDPEN 74 (134)
T ss_dssp CSCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCC--EECCCCGG------GHHHHHHHHHTTCSCGGG
T ss_pred CCCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCce--EEeecccc------cChhHHHHHHHHhCCCCC
Confidence 456799999999887 3 478999999999986 444 799 99998532 1235666665543 789
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeeccccH---HHHHhCCCceecCCCCCC
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH---MAWVQNGLKVKAREKPAD 148 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~---~~w~~~g~~~~~~~~~~~ 148 (153)
++||+||++|.||..+++.|.++||+||+.|.||+ .+|+++|+|++.+....+
T Consensus 75 ~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~~~~ 130 (134)
T 1vee_A 75 TTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTSG 130 (134)
T ss_dssp CEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCCCCC
T ss_pred CEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999 789999999998775444
No 18
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.90 E-value=1.3e-24 Score=152.04 Aligned_cols=111 Identities=18% Similarity=0.259 Sum_probs=91.0
Q ss_pred CCcceeecHHHHHHHHhC-CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeC
Q 031788 25 GAEVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ 103 (153)
Q Consensus 25 ~~~~~~i~~~~~~~~~~~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~ 103 (153)
...+..|+++++.+++++ +.+|||||++.||..|||||| +|||+..+. . .+ +.+...++++++||+||+
T Consensus 24 ~~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgA--inip~~~l~------~-~~-~~l~~~~~~~~~iVvyC~ 93 (152)
T 1t3k_A 24 ARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGS--LHYASGSFD------D-KI-SHLVQNVKDKDTLVFHSA 93 (152)
T ss_dssp CSSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSS--EEECCSSSS------T-TH-HHHHHTCCSCCEEEESSS
T ss_pred cCCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCC--EECCHHHHH------H-HH-HHHHHhcCCCCEEEEEcC
Confidence 445788999999888864 478999999999999999999 999996332 1 22 222222478899999999
Q ss_pred -CCccHHHHHHHHH--------HCCccceeeccccHHHHHhCCCceecCCC
Q 031788 104 -SGARSLHATADLL--------GAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 104 -~g~~a~~~~~~L~--------~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
+|.++..+++.|. ..||+||++|.||+.+|.++|+|+++..+
T Consensus 94 ~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 144 (152)
T 1t3k_A 94 LSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE 144 (152)
T ss_dssp CCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred CCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence 9999998888875 38999999999999999999999987664
No 19
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.89 E-value=7.9e-23 Score=154.64 Aligned_cols=117 Identities=16% Similarity=0.151 Sum_probs=99.4
Q ss_pred ceeecHHHHHHHHhC-CCeEEecCChhhhhcCCCCCcceeCccccccCCC-----CCCC-ChHHHHHHHhh-ccCCCeEE
Q 031788 28 VITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE-----GRVK-NPDFLKKVRSL-CKEEDRLV 99 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~-----~~~~-~~~~~~~~~~~-~~~~~~iv 99 (153)
...|+++++.+++++ +.+|||||++.||..|||||| +|+|+..+... ..++ ...|.+.+.++ ++++++||
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA--~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vv 85 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGA--RFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYV 85 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTC--EECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEE
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCC--EECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 458999999999864 578999999999999999999 99999765321 1222 23677777776 78999999
Q ss_pred EEeCCCc-cHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 031788 100 VGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP 146 (153)
Q Consensus 100 i~c~~g~-~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~ 146 (153)
+||++|. ++.++++.|+..||++|++|.||+.+|+++|+|+++..+.
T Consensus 86 vyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~~ 133 (271)
T 1e0c_A 86 VYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPA 133 (271)
T ss_dssp EECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCCC
T ss_pred EEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCCC
Confidence 9999887 9999999999999999999999999999999999877654
No 20
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.89 E-value=2.8e-23 Score=141.40 Aligned_cols=104 Identities=25% Similarity=0.350 Sum_probs=79.6
Q ss_pred cceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCC----------------------CCCChHH
Q 031788 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEG----------------------RVKNPDF 84 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~----------------------~~~~~~~ 84 (153)
.+..|+++++.+ .++.+|||||++.||..|||||| +|+|+..+.... .-..+++
T Consensus 3 ~~~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA--~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (134)
T 3g5j_A 3 AMSVIKIEKALK--LDKVIFVDVRTEGEYEEDHILNA--INMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDI 78 (134)
T ss_dssp --CEECHHHHTT--CTTEEEEECSCHHHHHHCCCTTC--EECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHH
T ss_pred CccccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCC--EEcCccchhhhhcccceeeecChhHHHhcccccccccHHHH
Confidence 356899998876 45689999999999999999999 999995221000 0000134
Q ss_pred HHHHHhhccCC-CeEEEEe-CCCccHHHHHHHHHHCCccceeeccccHHHHHhC
Q 031788 85 LKKVRSLCKEE-DRLVVGC-QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 136 (153)
Q Consensus 85 ~~~~~~~~~~~-~~ivi~c-~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~ 136 (153)
.+.+.. ++++ ++||+|| .+|.+|..+++.|+.+|| +|++|.||+.+|++.
T Consensus 79 ~~~~~~-~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 79 YLQAAE-LALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHHH-HHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred HHHHHH-hccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence 444444 3677 9999999 589999999999999999 999999999999874
No 21
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.88 E-value=2.3e-23 Score=132.04 Aligned_cols=77 Identities=30% Similarity=0.509 Sum_probs=70.1
Q ss_pred CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh-ccCCCeEEEEeCCCccHHHHHHHHHHCCccc
Q 031788 44 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKH 122 (153)
Q Consensus 44 ~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~ 122 (153)
.+|||||++.||..|||||| +|+|+. ++.+.+.++ .+++++||+||++|.+|..+++.|.+.||++
T Consensus 2 ~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~ 68 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGA--INIPLK-----------EVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTH 68 (85)
T ss_dssp EEEEECSCHHHHTTEEETTC--EECCHH-----------HHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSS
T ss_pred CEEEECCCHHHHHhCCCCCC--EEcCHH-----------HHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCC
Confidence 57899999999999999999 999996 677777666 6889999999999999999999999999999
Q ss_pred eeeccccHHHHH
Q 031788 123 VSNFGGGHMAWV 134 (153)
Q Consensus 123 v~~l~gG~~~w~ 134 (153)
|+++ ||+.+|.
T Consensus 69 v~~l-GG~~~w~ 79 (85)
T 2jtq_A 69 VENA-GGLKDIA 79 (85)
T ss_dssp EEEE-EETTTCC
T ss_pred EEec-cCHHHHh
Confidence 9999 9988884
No 22
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.88 E-value=1.7e-22 Score=153.50 Aligned_cols=116 Identities=20% Similarity=0.251 Sum_probs=98.6
Q ss_pred ceeecHHHHHHHHhC-CCeEEecC----------ChhhhhcCCCCCcceeCccccccCCC-----CCCC-ChHHHHHHHh
Q 031788 28 VITVDVRAAKNLLES-GYGYLDVR----------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GRVK-NPDFLKKVRS 90 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~-~~~iIDvR----------~~~e~~~ghi~ga~~i~ip~~~~~~~-----~~~~-~~~~~~~~~~ 90 (153)
...|+++++.+++++ +.+||||| ++.||..|||||| +|+|+..+... ..++ ..+|.+.+.+
T Consensus 3 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgA--i~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 1urh_A 3 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGA--VFFDIEALSDHTSPLPHMLPRPETFAVAMRE 80 (280)
T ss_dssp CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTC--EECCGGGGSCSSSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCC--EECCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 357999999999875 58899999 7899999999999 99999765221 1222 2467777877
Q ss_pred h-ccCCCeEEEEeCCCcc-HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 91 L-CKEEDRLVVGCQSGAR-SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 91 ~-~~~~~~ivi~c~~g~~-a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
+ ++++++||+||++|.+ |.++++.|+.+||++|++|+||+.+|.++|+|++++.+
T Consensus 81 ~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 137 (280)
T 1urh_A 81 LGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV 137 (280)
T ss_dssp TTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred cCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC
Confidence 7 7899999999999988 99999999999999999999999999999999998765
No 23
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.88 E-value=1.4e-22 Score=156.92 Aligned_cols=116 Identities=14% Similarity=0.150 Sum_probs=97.3
Q ss_pred ceeecHHHHHHHHhC-CCeEEecCChhh-hhcCCCCCcceeCcccccc---CCCCCCCC-hHHHHHHHhh-ccCCCeEEE
Q 031788 28 VITVDVRAAKNLLES-GYGYLDVRTAEE-FKEGHVDAAKIFNIPYMFN---TPEGRVKN-PDFLKKVRSL-CKEEDRLVV 100 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~-~~~iIDvR~~~e-~~~ghi~ga~~i~ip~~~~---~~~~~~~~-~~~~~~~~~~-~~~~~~ivi 100 (153)
...|+++++.+++++ +.+|||||++.| |..|||||| +|+|+... .....+++ ++|.+.+.++ ++++++||+
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGA--i~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVv 116 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGA--VKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVI 116 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTE--EECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCC--eEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 457999999999865 488999999886 999999999 99997421 11222333 3777788777 899999999
Q ss_pred EeCCCc-cHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 101 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 101 ~c~~g~-~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
||++|. +|.++++.|+.+||+||++|+||+.+|+++|+|++++.+
T Consensus 117 yc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 162 (318)
T 3hzu_A 117 YGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVP 162 (318)
T ss_dssp ECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCC
Confidence 999887 899999999999999999999999999999999988654
No 24
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.88 E-value=3.2e-23 Score=140.07 Aligned_cols=104 Identities=28% Similarity=0.282 Sum_probs=81.6
Q ss_pred eecHHHHHHHHhCC--CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHh----h-----ccCCCeE
Q 031788 30 TVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRS----L-----CKEEDRL 98 (153)
Q Consensus 30 ~i~~~~~~~~~~~~--~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~i 98 (153)
+|+++++.++++++ .+|||||++.||..|||||| +|+|+..+... ..++...+.+ . ++++++|
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~i 75 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHA--LHIPLKHLERR----DAESLKLLKEAIWEEKQGTQEGAAVPI 75 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTS--EECCHHHHHTT----CHHHHHHHHHHHHHHHTTC---CCEEE
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCc--eeCChHHHhhh----hhhhHHHHHHHHhhhcccccCCCCCeE
Confidence 68999999998743 89999999999999999999 99999754221 1122222211 1 2345599
Q ss_pred EEEeCCCccHHHHHHHHHHC------CccceeeccccHHHHHhCCCc
Q 031788 99 VVGCQSGARSLHATADLLGA------GFKHVSNFGGGHMAWVQNGLK 139 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~------G~~~v~~l~gG~~~w~~~g~~ 139 (153)
|+||++|.+|..+++.|.+. ||.+|++|.||+.+|.++..|
T Consensus 76 vv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 76 YVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp EEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred EEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 99999999999999999998 689999999999999986544
No 25
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.88 E-value=1.7e-22 Score=152.83 Aligned_cols=112 Identities=20% Similarity=0.314 Sum_probs=94.0
Q ss_pred eeecHHHHHHHHhCC-CeEEecCChhhhh--------cCCCCCcceeCccccccC-CC-CCCCChHHHHHHHhh-ccCCC
Q 031788 29 ITVDVRAAKNLLESG-YGYLDVRTAEEFK--------EGHVDAAKIFNIPYMFNT-PE-GRVKNPDFLKKVRSL-CKEED 96 (153)
Q Consensus 29 ~~i~~~~~~~~~~~~-~~iIDvR~~~e~~--------~ghi~ga~~i~ip~~~~~-~~-~~~~~~~~~~~~~~~-~~~~~ 96 (153)
..++++++.+.++++ .+|||||++.||. .|||||| +|+|+..+. +. .....++|.+.+.+. +++++
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGA--VNFEWTAAMDPSRALRIRTDIAGRLEELGITPDK 224 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTC--EECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTS
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCc--eeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 357999999988764 8899999999999 8999999 999997652 11 112224676667654 78999
Q ss_pred eEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhC-CCceec
Q 031788 97 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVKA 142 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~-g~~~~~ 142 (153)
+||+||++|.||..++..|..+||+||++|.||+.+|.+. |+|+++
T Consensus 225 ~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 225 EIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp EEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred CEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 9999999999999999999999999999999999999998 998863
No 26
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.87 E-value=2.4e-22 Score=141.37 Aligned_cols=108 Identities=14% Similarity=0.236 Sum_probs=90.4
Q ss_pred cCCcceeecHHHHHHHHhC-------CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHH-Hh---hc
Q 031788 24 SGAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV-RS---LC 92 (153)
Q Consensus 24 ~~~~~~~i~~~~~~~~~~~-------~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~-~~---~~ 92 (153)
.......|+++++.+++++ +.+|||||++.||..|||||| +|+|+. ++.+.. .. +.
T Consensus 18 ~~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgA--inip~~-----------~~~~~~~~~~~~~~ 84 (161)
T 1c25_A 18 KHQDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGA--VNLHME-----------EEVEDFLLKKPIVP 84 (161)
T ss_dssp SCTTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHTTTSCCCC
T ss_pred CCCCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCc--EeCChh-----------HHHHHHHhhhhhcc
Confidence 4556789999999999975 478999999999999999999 999995 444433 21 13
Q ss_pred cCCCeE--EEEeC-CCccHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 031788 93 KEEDRL--VVGCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE 144 (153)
Q Consensus 93 ~~~~~i--vi~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~gG~~~w~~~g~~~~~~~ 144 (153)
++++++ |+||+ +|.|+..+++.|.+ .||++|++|.||+.+|.+++.|+..+.
T Consensus 85 ~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~ 149 (161)
T 1c25_A 85 TDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP 149 (161)
T ss_dssp CTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS
T ss_pred CCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC
Confidence 578886 57899 99999999999986 499999999999999999999998764
No 27
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.87 E-value=1.5e-21 Score=150.22 Aligned_cols=120 Identities=17% Similarity=0.141 Sum_probs=96.2
Q ss_pred cCCcceeecHHHHHHHHhC-----CCeEEecC---------ChhhhhcCCCCCcceeCccccccC-C----CCCCCC-hH
Q 031788 24 SGAEVITVDVRAAKNLLES-----GYGYLDVR---------TAEEFKEGHVDAAKIFNIPYMFNT-P----EGRVKN-PD 83 (153)
Q Consensus 24 ~~~~~~~i~~~~~~~~~~~-----~~~iIDvR---------~~~e~~~ghi~ga~~i~ip~~~~~-~----~~~~~~-~~ 83 (153)
.......|+++++.+++++ +.+||||| ++.||..|||||| +|||+..+. + ...++. ..
T Consensus 17 ~~~~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGA--i~i~~~~~~~~~~~~~~~lp~~~~ 94 (302)
T 3olh_A 17 NLYFQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGA--AFFDIDQCSDRTSPYDHMLPGAEH 94 (302)
T ss_dssp ---CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTC--EECCTTTSSCSSCSSSSCCCCHHH
T ss_pred ccCCCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCC--eEeCHHHhcCcCCCCCCCCCCHHH
Confidence 4445578999999999975 57899999 7899999999999 999986541 1 111222 36
Q ss_pred HHHHHHhh-ccCCCeEEEEeCC---CccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 84 FLKKVRSL-CKEEDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 84 ~~~~~~~~-~~~~~~ivi~c~~---g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
|.+.+.++ ++++++||+||++ +.+|.++++.|+.+||++|++|+||+.+|+++|+|+++..+
T Consensus 95 ~~~~~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 160 (302)
T 3olh_A 95 FAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGKS 160 (302)
T ss_dssp HHHHHHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSCC
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCCC
Confidence 77788887 7899999999963 34699999999999999999999999999999999988753
No 28
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.87 E-value=4.3e-22 Score=151.30 Aligned_cols=112 Identities=21% Similarity=0.333 Sum_probs=85.2
Q ss_pred eecHHHHHHHHhC-CCeEEecCChhhh-----------hcCCCCCcceeCccccccCCCCCCCCh-HHHHHHHhh-ccCC
Q 031788 30 TVDVRAAKNLLES-GYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFNTPEGRVKNP-DFLKKVRSL-CKEE 95 (153)
Q Consensus 30 ~i~~~~~~~~~~~-~~~iIDvR~~~e~-----------~~ghi~ga~~i~ip~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 95 (153)
.++++++.+++++ +.+|||||++.|| ..|||||| +|||+..+...+.+... ++.+.+... ++++
T Consensus 153 ~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA--~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (280)
T 1urh_A 153 VVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGA--LNVPWTELVREGELKTTDELDAIFFGRGVSYD 230 (280)
T ss_dssp BCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTC--EECCGGGGBSSSSBCCHHHHHHHHHTTTCCSS
T ss_pred EEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCc--eEeeHHHhhcCCccCCHHHHHHHHHHcCCCCC
Confidence 4999999998874 5899999999999 68999999 99999877544444443 343444443 6899
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecC
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAR 143 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~-~g~~~~~~ 143 (153)
++||+||++|.||..++..|..+||+||+.|.||+.+|.+ .++|+++.
T Consensus 231 ~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~ 279 (280)
T 1urh_A 231 KPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPV 279 (280)
T ss_dssp SCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC------------
T ss_pred CCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCceec
Confidence 9999999999999999999999999999999999999987 49998753
No 29
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.87 E-value=1.9e-21 Score=148.99 Aligned_cols=118 Identities=20% Similarity=0.207 Sum_probs=97.8
Q ss_pred cceeecHHHHHHHHhC-----CCeEEecC--------ChhhhhcCCCCCcceeCccccccCCC-----CCCCC-hHHHHH
Q 031788 27 EVITVDVRAAKNLLES-----GYGYLDVR--------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GRVKN-PDFLKK 87 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~~-----~~~iIDvR--------~~~e~~~ghi~ga~~i~ip~~~~~~~-----~~~~~-~~~~~~ 87 (153)
....|+++++.+++++ +.+||||| ++.+|..|||||| +|+|+..+... ..++. .+|.+.
T Consensus 6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGA--i~ip~~~l~~~~~~~~~~lp~~~~~~~~ 83 (296)
T 1rhs_A 6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGA--SFFDIEECRDKASPYEVMLPSEAGFADY 83 (296)
T ss_dssp CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTC--EECCTTTSSCTTSSSSSCCCCHHHHHHH
T ss_pred cCceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCC--EEeCHHHhcCCCCCCCCCCCCHHHHHHH
Confidence 3568999999999975 47899999 6899999999999 99998755221 12232 366667
Q ss_pred HHhh-ccCCCeEEEEeCC--Ccc-HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 031788 88 VRSL-CKEEDRLVVGCQS--GAR-SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP 146 (153)
Q Consensus 88 ~~~~-~~~~~~ivi~c~~--g~~-a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~ 146 (153)
+.++ ++++++||+||++ |.+ +.++++.|+.+||++|++|.||+.+|+++|+|+++..+.
T Consensus 84 l~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~ 146 (296)
T 1rhs_A 84 VGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSR 146 (296)
T ss_dssp HHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCCC
T ss_pred HHHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCCCC
Confidence 7766 7899999999998 776 789999999999999999999999999999999887543
No 30
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.87 E-value=1.2e-21 Score=150.04 Aligned_cols=115 Identities=18% Similarity=0.353 Sum_probs=96.6
Q ss_pred eeecHHHHHHHHhC-CCeEEecCChhhh------------hcCCCCCcceeCccccccC-CCCCCCCh-HHHHHHHhh-c
Q 031788 29 ITVDVRAAKNLLES-GYGYLDVRTAEEF------------KEGHVDAAKIFNIPYMFNT-PEGRVKNP-DFLKKVRSL-C 92 (153)
Q Consensus 29 ~~i~~~~~~~~~~~-~~~iIDvR~~~e~------------~~ghi~ga~~i~ip~~~~~-~~~~~~~~-~~~~~~~~~-~ 92 (153)
..++++++.+++++ +.+|||||++.|| ..|||||| +|||+..+. +.+.+... ++.+.+... +
T Consensus 160 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA--~nip~~~l~~~~~~~~~~~~l~~~~~~~~~ 237 (296)
T 1rhs_A 160 LLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGS--VNMPFMNFLTEDGFEKSPEELRAMFEAKKV 237 (296)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTC--EECCGGGGBCTTSCBCCHHHHHHHHHHTTC
T ss_pred eEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCC--EeecHHHhcCCCCcCCCHHHHHHHHHHcCC
Confidence 57899999998864 5899999999999 78999999 999998763 23334433 444445543 6
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecCCC
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAREK 145 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~-~g~~~~~~~~ 145 (153)
+++++||+||++|.||..++..|..+||+||+.|.||+.+|.+ .++|++++..
T Consensus 238 ~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~~ 291 (296)
T 1rhs_A 238 DLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQG 291 (296)
T ss_dssp CTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBTT
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCCC
Confidence 8999999999999999999999999999999999999999998 7999988764
No 31
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.87 E-value=1.1e-21 Score=149.31 Aligned_cols=113 Identities=26% Similarity=0.433 Sum_probs=94.7
Q ss_pred eecHHHHHHHHh----CCCeEEecCChhhhh----------------cCCCCCcceeCccccccC-CCCCCCCh-HHHHH
Q 031788 30 TVDVRAAKNLLE----SGYGYLDVRTAEEFK----------------EGHVDAAKIFNIPYMFNT-PEGRVKNP-DFLKK 87 (153)
Q Consensus 30 ~i~~~~~~~~~~----~~~~iIDvR~~~e~~----------------~ghi~ga~~i~ip~~~~~-~~~~~~~~-~~~~~ 87 (153)
.++++++.+.++ .+..|||||++.||. .|||||| +|+|+..+. +.+.+.++ +|.+.
T Consensus 147 ~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~ 224 (285)
T 1uar_A 147 RAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGA--KNIPWAKAVNPDGTFKSAEELRAL 224 (285)
T ss_dssp EECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHH
T ss_pred EEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCc--cccCHHHhcCCCCcCCCHHHHHHH
Confidence 499999999884 446799999999997 7999999 999987663 33444444 44455
Q ss_pred HHhh-ccCCCeEEEEeCCCccHHHHHHHHH-HCCccceeeccccHHHHH-hCCCceecCC
Q 031788 88 VRSL-CKEEDRLVVGCQSGARSLHATADLL-GAGFKHVSNFGGGHMAWV-QNGLKVKARE 144 (153)
Q Consensus 88 ~~~~-~~~~~~ivi~c~~g~~a~~~~~~L~-~~G~~~v~~l~gG~~~w~-~~g~~~~~~~ 144 (153)
+.+. ++++++||+||++|.+|..+++.|. .+||++|++|+||+.+|. ..|+|++++.
T Consensus 225 ~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g~ 284 (285)
T 1uar_A 225 YEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE 284 (285)
T ss_dssp HGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred HHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccCC
Confidence 5554 6899999999999999999999999 999999999999999998 7899998753
No 32
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.87 E-value=9.4e-22 Score=152.34 Aligned_cols=114 Identities=27% Similarity=0.443 Sum_probs=95.5
Q ss_pred eecHHHHHHHHhCCCeEEecCChhhhhc----------------CCCCCcceeCcccccc-CCCCCCCChHHHHHHHhhc
Q 031788 30 TVDVRAAKNLLESGYGYLDVRTAEEFKE----------------GHVDAAKIFNIPYMFN-TPEGRVKNPDFLKKVRSLC 92 (153)
Q Consensus 30 ~i~~~~~~~~~~~~~~iIDvR~~~e~~~----------------ghi~ga~~i~ip~~~~-~~~~~~~~~~~~~~~~~~~ 92 (153)
.++++++.+.++++ +|||||++.||.. |||||| +|+|+..+ .+++.+..++..+.....+
T Consensus 180 ~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA--~niP~~~~~~~~g~~~~~~~l~~~~~~l 256 (318)
T 3hzu_A 180 RAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTA--VHIPWGKAADESGRFRSREELERLYDFI 256 (318)
T ss_dssp BCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHHTTTC
T ss_pred cccHHHHHHhhcCC-eEEecCCHHHhcccccCccccccccCCcCcCCCCe--eecCHHHhcCCCCcCCCHHHHHHHhcCC
Confidence 47899999988776 8999999999998 999999 99999765 4455555543333333336
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHH-CCccceeeccccHHHHHh-CCCceecCCCC
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGHMAWVQ-NGLKVKAREKP 146 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~-~G~~~v~~l~gG~~~w~~-~g~~~~~~~~~ 146 (153)
+++++||+||++|.||..++..|.+ +||++|+.|.||+.+|.+ .|+|++++..+
T Consensus 257 ~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~~~ 312 (318)
T 3hzu_A 257 NPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEP 312 (318)
T ss_dssp CTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSSSC
T ss_pred CCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCCCC
Confidence 8999999999999999999999997 999999999999999995 69999988643
No 33
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.86 E-value=1.1e-21 Score=143.95 Aligned_cols=107 Identities=15% Similarity=0.254 Sum_probs=89.8
Q ss_pred CCcceeecHHHHHHHHhC-------CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHH-HHh--hc--
Q 031788 25 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK-VRS--LC-- 92 (153)
Q Consensus 25 ~~~~~~i~~~~~~~~~~~-------~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~-~~~--~~-- 92 (153)
......|+++++.+++++ +.+|||||++.||..|||||| +|||+. ++.+. +.. .+
T Consensus 40 ~~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGA--inip~~-----------~l~~~~~~~~~~l~~ 106 (211)
T 1qb0_A 40 HQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTA--VNLPLE-----------RDAESFLLKSPIAPC 106 (211)
T ss_dssp STTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHHHTTTCCCS
T ss_pred cCCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCC--EECCch-----------HHHHHhhhhhhhccc
Confidence 456789999999999875 478999999999999999999 999995 44432 332 22
Q ss_pred cCCCeE--EEEeC-CCccHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 031788 93 KEEDRL--VVGCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE 144 (153)
Q Consensus 93 ~~~~~i--vi~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~gG~~~w~~~g~~~~~~~ 144 (153)
+++++| |+||+ +|.++..+++.|.+ +||++|++|.||+.+|.++|.|+..+.
T Consensus 107 ~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~~ 171 (211)
T 1qb0_A 107 SLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 171 (211)
T ss_dssp STTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred cCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCCC
Confidence 378887 78899 99999999999986 699999999999999999999987654
No 34
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.86 E-value=7.7e-22 Score=149.65 Aligned_cols=116 Identities=15% Similarity=0.213 Sum_probs=95.6
Q ss_pred ceeecHHHHHHHHhC-CCeEEecCC-hhhhhcCCCCCcceeCccccccCC---CCCCCC-hHHHHHHHhh-ccCCCeEEE
Q 031788 28 VITVDVRAAKNLLES-GYGYLDVRT-AEEFKEGHVDAAKIFNIPYMFNTP---EGRVKN-PDFLKKVRSL-CKEEDRLVV 100 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~-~~~iIDvR~-~~e~~~ghi~ga~~i~ip~~~~~~---~~~~~~-~~~~~~~~~~-~~~~~~ivi 100 (153)
...|+++++.+++++ +.+|||||+ +.||..|||||| +|+|+..... ...+.. .+|.+.+.++ ++++++||+
T Consensus 5 ~~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvv 82 (277)
T 3aay_A 5 DVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGA--IKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVIL 82 (277)
T ss_dssp HHEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTC--EEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEE
T ss_pred CceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCc--EEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 357999999998875 478999998 899999999999 9999864211 112222 3577777776 789999999
Q ss_pred EeCCCc-cHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 101 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 101 ~c~~g~-~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
||++|. ++.++++.|+.+||++|++|.||+.+|.++|+|+++..+
T Consensus 83 yc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 128 (277)
T 3aay_A 83 YGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV 128 (277)
T ss_dssp ECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC
Confidence 999875 689999999999999999999999999999999987754
No 35
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.86 E-value=1.2e-21 Score=161.08 Aligned_cols=107 Identities=18% Similarity=0.262 Sum_probs=95.6
Q ss_pred CcceeecHHHHHHHHhC--CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh-ccCCCeEEEEe
Q 031788 26 AEVITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGC 102 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~--~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ivi~c 102 (153)
.....|+++++.+++++ +.+|||||++.||..|||||| +|||+. +|...+.++ .+++++||+||
T Consensus 4 ~~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgA--v~ip~~-----------~~~~~~~~l~~~~~~~iVvyc 70 (539)
T 1yt8_A 4 SQIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFA--ANLPLS-----------RLELEIHARVPRRDTPITVYD 70 (539)
T ss_dssp --CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTC--EECCGG-----------GHHHHHHHHSCCTTSCEEEEC
T ss_pred CcCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHHhhCCCCCCeEEEEE
Confidence 45788999999999874 489999999999999999999 999996 777777776 46799999999
Q ss_pred CCCccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 103 QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 103 ~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
++|.+|.++++.|+..||+||++|.||+.+|+++|+|++++.+
T Consensus 71 ~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 113 (539)
T 1yt8_A 71 DGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVN 113 (539)
T ss_dssp SSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSSS
T ss_pred CCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCCc
Confidence 9999999999999999999999999999999999999987653
No 36
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.86 E-value=9.2e-22 Score=137.48 Aligned_cols=108 Identities=19% Similarity=0.253 Sum_probs=82.7
Q ss_pred CcceeecHHHHHHHHhC-----CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh-ccCCC-eE
Q 031788 26 AEVITVDVRAAKNLLES-----GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEED-RL 98 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~-----~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~i 98 (153)
..+..|+++++.+++++ +.+|||||++ ||..|||||| +|||+..+ .. .....+... .++++ .|
T Consensus 2 ~~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGA--inip~~~l------~~-~~~~~l~~~l~~~~~~~v 71 (152)
T 2j6p_A 2 TNYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNS--INMPTISC------TE-EMYEKLAKTLFEEKKELA 71 (152)
T ss_dssp -CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTC--EECCTTTC------CH-HHHHHHHHHHHHTTCCEE
T ss_pred CCcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCc--EECChhHh------hH-HHHHHHHHHhcccCCCEE
Confidence 45788999999999875 5789999999 9999999999 99999532 11 122222222 22344 57
Q ss_pred EEEe-CCCccHHHHH----HHHHHCCc--cceeeccccHHHHHhCCCceecC
Q 031788 99 VVGC-QSGARSLHAT----ADLLGAGF--KHVSNFGGGHMAWVQNGLKVKAR 143 (153)
Q Consensus 99 vi~c-~~g~~a~~~~----~~L~~~G~--~~v~~l~gG~~~w~~~g~~~~~~ 143 (153)
|+|| .+|.|+..++ +.|.+.|| .+|++|.||+.+|.++|.++..+
T Consensus 72 V~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~~ 123 (152)
T 2j6p_A 72 VFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRPD 123 (152)
T ss_dssp EEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCGG
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCCC
Confidence 7779 6999988887 77888997 58999999999999998877653
No 37
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.86 E-value=4.6e-22 Score=138.82 Aligned_cols=116 Identities=19% Similarity=0.153 Sum_probs=83.0
Q ss_pred ceeecHHHHHHHHhC---CCeEEecCChhhhhcCCCCCcceeCccccccC-C---CCCCCChHHH-HHH-Hhh-ccCCCe
Q 031788 28 VITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT-P---EGRVKNPDFL-KKV-RSL-CKEEDR 97 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~---~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~-~---~~~~~~~~~~-~~~-~~~-~~~~~~ 97 (153)
.+.|+++++.+++++ +.+|||||++.||..|||||| +|||+..+. . .+.+...++. ... .++ ++++++
T Consensus 3 ~~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgA--inip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (153)
T 2vsw_A 3 GTQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEA--ININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQK 80 (153)
T ss_dssp CEEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTC--EECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSE
T ss_pred CccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCC--eeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCe
Confidence 468999999999973 478999999999999999999 999996320 0 0000000110 000 011 478899
Q ss_pred EEEEeCCCccHHHH------HHHHH--HCCccceeeccccHHHHHhCCCceecCCC
Q 031788 98 LVVGCQSGARSLHA------TADLL--GAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 98 ivi~c~~g~~a~~~------~~~L~--~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
||+||++|.++..+ ++.|. ..||++|++|.||+.+|.+.+.++..+.+
T Consensus 81 iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~~ 136 (153)
T 2vsw_A 81 VVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGKS 136 (153)
T ss_dssp EEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC--
T ss_pred EEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCCC
Confidence 99999999887655 46666 34999999999999999998777776553
No 38
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.86 E-value=1.4e-21 Score=139.31 Aligned_cols=108 Identities=14% Similarity=0.222 Sum_probs=86.9
Q ss_pred cCCcceeecHHHHHHHHhC-------CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHH-HHh--hc-
Q 031788 24 SGAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK-VRS--LC- 92 (153)
Q Consensus 24 ~~~~~~~i~~~~~~~~~~~-------~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~-~~~--~~- 92 (153)
.......|+++++.+++++ +.+|||||++.||..|||||| +|+|+. ++.+. +.. ++
T Consensus 19 ~~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgA--inip~~-----------~l~~~~~~~~~~~~ 85 (175)
T 2a2k_A 19 KHQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTA--VNLPLE-----------RDAESFLLKSPIAP 85 (175)
T ss_dssp SSTTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHHHSSCCCC
T ss_pred cCCCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCc--EECChh-----------HHHHHhhhhhhhcc
Confidence 3456789999999999874 478999999999999999999 999995 44333 222 22
Q ss_pred -cCCCeEEE--EeC-CCccHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 031788 93 -KEEDRLVV--GCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE 144 (153)
Q Consensus 93 -~~~~~ivi--~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~gG~~~w~~~g~~~~~~~ 144 (153)
+++++||+ ||+ +|.||..+++.|++ +||++|++|.||+.+|.+++.|+..+.
T Consensus 86 ~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~~ 151 (175)
T 2a2k_A 86 CSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 151 (175)
T ss_dssp ----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred ccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCCC
Confidence 37888855 599 89999999999985 599999999999999999999987654
No 39
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.86 E-value=5.3e-22 Score=151.07 Aligned_cols=117 Identities=20% Similarity=0.250 Sum_probs=96.9
Q ss_pred ceeecHHHHHHHHhC-CCeEEecC-ChhhhhcCCCCCcceeCcccccc-C-C-CCCCCC-hHHHHHHHhh-ccCCCeEEE
Q 031788 28 VITVDVRAAKNLLES-GYGYLDVR-TAEEFKEGHVDAAKIFNIPYMFN-T-P-EGRVKN-PDFLKKVRSL-CKEEDRLVV 100 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~-~~~iIDvR-~~~e~~~ghi~ga~~i~ip~~~~-~-~-~~~~~~-~~~~~~~~~~-~~~~~~ivi 100 (153)
...|+++++.+++++ +.+||||| ++.+|..|||||| +|+|+... . + ...+.. .+|.+.+.++ ++++++||+
T Consensus 7 ~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivv 84 (285)
T 1uar_A 7 EVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGA--QKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVL 84 (285)
T ss_dssp GGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTC--EEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCC--EECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 467999999998876 47899999 7899999999999 99998632 1 1 112222 2577777776 789999999
Q ss_pred EeCCCc-cHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 031788 101 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP 146 (153)
Q Consensus 101 ~c~~g~-~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~ 146 (153)
||++|. +|.++++.|+.+||++|++|.||+.+|.++|+|++++.+.
T Consensus 85 yc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 131 (285)
T 1uar_A 85 YGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPS 131 (285)
T ss_dssp ECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCC
T ss_pred ECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCCc
Confidence 999887 7999999999999999999999999999999999876543
No 40
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.86 E-value=2.7e-21 Score=142.30 Aligned_cols=106 Identities=17% Similarity=0.262 Sum_probs=85.1
Q ss_pred CCcceeecHHHHHHHHhCC-------CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChH-HHHHHHhh----c
Q 031788 25 GAEVITVDVRAAKNLLESG-------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPD-FLKKVRSL----C 92 (153)
Q Consensus 25 ~~~~~~i~~~~~~~~~~~~-------~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~-~~~~~~~~----~ 92 (153)
...+..|+++++.++++++ ++|||||++.||..|||||| +|||.. + +.+.+... .
T Consensus 53 ~~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGA--inIP~~-----------~~l~~~l~~~~~~~~ 119 (216)
T 3op3_A 53 HQDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGA--LNLYSQ-----------EELFNFFLKKPIVPL 119 (216)
T ss_dssp CSSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTC--EECCSH-----------HHHHHHHTSSCCCCS
T ss_pred CCCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCC--EECChH-----------HHHHHHHhhcccccc
Confidence 4457899999999999753 68999999999999999999 999995 3 33343221 2
Q ss_pred cCCCe--EEEEeC-CCccHHHHHHHHHHC----------CccceeeccccHHHHHhCCCceecC
Q 031788 93 KEEDR--LVVGCQ-SGARSLHATADLLGA----------GFKHVSNFGGGHMAWVQNGLKVKAR 143 (153)
Q Consensus 93 ~~~~~--ivi~c~-~g~~a~~~~~~L~~~----------G~~~v~~l~gG~~~w~~~g~~~~~~ 143 (153)
+++++ ||+||. +|.|+..+++.|+.. ||++|++|.||+.+|.++..++..+
T Consensus 120 ~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lcep 183 (216)
T 3op3_A 120 DTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCEP 183 (216)
T ss_dssp STTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred ccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcccccC
Confidence 33454 999999 999999999999876 8999999999999999986666554
No 41
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.86 E-value=2.1e-21 Score=147.20 Aligned_cols=110 Identities=22% Similarity=0.364 Sum_probs=92.1
Q ss_pred ecHHHHHHHHhCCCeEEecCChhhhhc----------------CCCCCcceeCcccccc-CCCCCCCCh-HHHHHHHhh-
Q 031788 31 VDVRAAKNLLESGYGYLDVRTAEEFKE----------------GHVDAAKIFNIPYMFN-TPEGRVKNP-DFLKKVRSL- 91 (153)
Q Consensus 31 i~~~~~~~~~~~~~~iIDvR~~~e~~~----------------ghi~ga~~i~ip~~~~-~~~~~~~~~-~~~~~~~~~- 91 (153)
++++++.+.++++. |||||++.||.. |||||| +|+|+..+ ...+.+..+ ++.+.+.+.
T Consensus 146 ~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~~~~~~ 222 (277)
T 3aay_A 146 AFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGA--INVPWSRAANEDGTFKSDEELAKLYADAG 222 (277)
T ss_dssp ECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHHHHHHT
T ss_pred cCHHHHHHhcCCCC-EEEeCChHHeeeeecccccccccccccCCcCCCc--eecCHHHhcCCCCcCCCHHHHHHHHHHcC
Confidence 77899988887655 999999999985 999999 99998755 333444443 455556554
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHH-CCccceeeccccHHHHHh-CCCceecC
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGHMAWVQ-NGLKVKAR 143 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~-~G~~~v~~l~gG~~~w~~-~g~~~~~~ 143 (153)
++++++||+||++|.+|..++..|.+ +||+||++|+||+.+|.+ .|+|++++
T Consensus 223 ~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 223 LDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp CCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred CCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 78999999999999999999999996 999999999999999998 89999864
No 42
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.86 E-value=1.8e-21 Score=149.72 Aligned_cols=110 Identities=24% Similarity=0.378 Sum_probs=92.6
Q ss_pred eeecHHHHHHHHhC-CCeEEecCChhhh-----------hcCCCCCcceeCcccccc-CCCCCCCCh-HHHHHHHhh-cc
Q 031788 29 ITVDVRAAKNLLES-GYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFN-TPEGRVKNP-DFLKKVRSL-CK 93 (153)
Q Consensus 29 ~~i~~~~~~~~~~~-~~~iIDvR~~~e~-----------~~ghi~ga~~i~ip~~~~-~~~~~~~~~-~~~~~~~~~-~~ 93 (153)
..++++++.+.+++ +.+|||||++.|| ..|||||| +|+|+..+ ...+.+..+ ++.+.+.+. ++
T Consensus 175 ~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGA--iniP~~~l~~~~~~~~~~~~l~~~~~~~~~~ 252 (302)
T 3olh_A 175 FIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGT--VNIPFTDFLSQEGLEKSPEEIRHLFQEKKVD 252 (302)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTC--EECCGGGGBCSSSCBCCHHHHHHHHHHTTCC
T ss_pred ceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCc--eecCHHHhcCCCCccCCHHHHHHHHHhcCCC
Confidence 35889999888864 5899999999999 78999999 99999876 333444443 555555554 78
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 140 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~ 140 (153)
++++||+||++|.||..++..|..+||++|++|+||+.+|.+++.|.
T Consensus 253 ~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 253 LSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp TTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred CCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 89999999999999999999999999999999999999999988764
No 43
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.85 E-value=2.1e-21 Score=146.63 Aligned_cols=102 Identities=20% Similarity=0.269 Sum_probs=87.4
Q ss_pred CcceeecHHHHHHHHhCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEe
Q 031788 26 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGC 102 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c 102 (153)
.....|+++++.++++++ .+|||||++.||..|||||| +|+|+..+. ++.+++.+. .+++++||+||
T Consensus 119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGA--iniP~~~~~--------~~~~~l~~~l~~~kdk~IVvyC 188 (265)
T 4f67_A 119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNA--INPDIENFR--------EFPDYVQRNLIDKKDKKIAMFC 188 (265)
T ss_dssp CTTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTC--BCCCCSSGG--------GHHHHHHHHTGGGTTSCEEEEC
T ss_pred CCCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCC--EeCCHHHHH--------hhHHHHHHhhhhCCCCeEEEEe
Confidence 346789999999999764 89999999999999999999 999985331 444444432 47899999999
Q ss_pred CCCccHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 031788 103 QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 137 (153)
Q Consensus 103 ~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g 137 (153)
.+|.||..+++.|.+.||+||+.|.||+.+|.++.
T Consensus 189 ~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~ 223 (265)
T 4f67_A 189 TGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESI 223 (265)
T ss_dssp SSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred CCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence 99999999999999999999999999999999763
No 44
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.85 E-value=3.1e-21 Score=152.35 Aligned_cols=114 Identities=18% Similarity=0.167 Sum_probs=95.8
Q ss_pred ceeecHHHHHHHHhCCCeEEecCC--------hhhhhcCCCCCcceeCccccc-cCC-------CCCCCC-hHHHHHHHh
Q 031788 28 VITVDVRAAKNLLESGYGYLDVRT--------AEEFKEGHVDAAKIFNIPYMF-NTP-------EGRVKN-PDFLKKVRS 90 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~~~~iIDvR~--------~~e~~~ghi~ga~~i~ip~~~-~~~-------~~~~~~-~~~~~~~~~ 90 (153)
...|+++++.+++++ .+|||||+ +.||..|||||| +|+|+.. +.. ...++. .+|.+.+.+
T Consensus 13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGA--i~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~ 89 (373)
T 1okg_A 13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSA--IRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA 89 (373)
T ss_dssp CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTC--EECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCC--EEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence 578999999998877 89999998 699999999999 9999875 421 122232 367777776
Q ss_pred h-ccCCCeEEEEe-CCCccHH-HHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 91 L-CKEEDRLVVGC-QSGARSL-HATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 91 ~-~~~~~~ivi~c-~~g~~a~-~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
. ++++++||+|| .+|.++. ++++.|+.+|| +|++|+||+.+|+++|+|++++.+
T Consensus 90 ~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~~ 146 (373)
T 1okg_A 90 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEP 146 (373)
T ss_dssp TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCC
T ss_pred cCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCCC
Confidence 6 78999999999 6787876 99999999999 999999999999999999987754
No 45
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.85 E-value=2.6e-21 Score=132.73 Aligned_cols=109 Identities=17% Similarity=0.171 Sum_probs=78.8
Q ss_pred eecHHHHHH--------HHhC-CCeEEecCChhhhhcCCCCCcceeCccccccCC-----CCCCCChHHHHHHHhh--c-
Q 031788 30 TVDVRAAKN--------LLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTP-----EGRVKNPDFLKKVRSL--C- 92 (153)
Q Consensus 30 ~i~~~~~~~--------~~~~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~-----~~~~~~~~~~~~~~~~--~- 92 (153)
.|+++++.+ .+++ +.+|||||++.||..|||||| +|+|+..+.. .+.. .+...+... .
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA--~~ip~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 76 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGA--VHINCADKISRRRLQQGKI---TVLDLISCREGKD 76 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTC--EECCCSSHHHHHHHHTTSS---CHHHHHHTTSCTT
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCc--cccCccHHHHHHHhhcCCc---chhhhCCChhhhH
Confidence 588999988 5544 489999999999999999999 9999863210 0000 011111000 0
Q ss_pred ----cCCCeEEEEeCCCccH---------HHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 031788 93 ----KEEDRLVVGCQSGARS---------LHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 144 (153)
Q Consensus 93 ----~~~~~ivi~c~~g~~a---------~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~ 144 (153)
.++++||+||++|.++ ..++..|...|| +|++|.||+.+|.++|.++.++.
T Consensus 77 ~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~ 140 (142)
T 2ouc_A 77 SFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNS 140 (142)
T ss_dssp HHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred HHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence 0278999999999875 457888999999 99999999999999999998765
No 46
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.84 E-value=1.1e-20 Score=151.24 Aligned_cols=117 Identities=23% Similarity=0.348 Sum_probs=95.7
Q ss_pred eecHHHHHHHHhC-CCeEEecCChhhh-----------hcCCCCCcceeCcccc-------cc-CCCCCCCCh-HHHHHH
Q 031788 30 TVDVRAAKNLLES-GYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYM-------FN-TPEGRVKNP-DFLKKV 88 (153)
Q Consensus 30 ~i~~~~~~~~~~~-~~~iIDvR~~~e~-----------~~ghi~ga~~i~ip~~-------~~-~~~~~~~~~-~~~~~~ 88 (153)
.++++++.+++++ +.+|||||++.|| ..|||||| +|+|+. .+ ++++.+..+ ++.+.+
T Consensus 273 ~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 350 (423)
T 2wlr_A 273 MLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGA--RWGHAGSDSTHMEDFHNPDGTMRSADDITAMW 350 (423)
T ss_dssp EECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTC--EECCCCSSTTCCGGGBCTTSSBCCHHHHHHHH
T ss_pred eecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCc--cccccccccccHHHHcCCCCcCCCHHHHHHHH
Confidence 4889999888875 4789999999999 78999999 988875 11 333444443 454555
Q ss_pred Hhh-ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecCCCCCC
Q 031788 89 RSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAREKPAD 148 (153)
Q Consensus 89 ~~~-~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~-~g~~~~~~~~~~~ 148 (153)
... ++++++||+||++|.||..++..|..+||+||+.|.||+.+|.+ .++|++++.+++.
T Consensus 351 ~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~~~ 412 (423)
T 2wlr_A 351 KAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPD 412 (423)
T ss_dssp HTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSCCC-
T ss_pred HHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCCCCC
Confidence 433 68999999999999999999999999999999999999999998 8999998876554
No 47
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.83 E-value=5.6e-21 Score=141.50 Aligned_cols=98 Identities=29% Similarity=0.380 Sum_probs=82.3
Q ss_pred eecHHHHHHHHhCCCeEEecCChhhhhc----------CCCCCcceeCccccccCCCCCCCChHHHHHHHhh-ccCCCeE
Q 031788 30 TVDVRAAKNLLESGYGYLDVRTAEEFKE----------GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRL 98 (153)
Q Consensus 30 ~i~~~~~~~~~~~~~~iIDvR~~~e~~~----------ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i 98 (153)
.++++++.+ +.+|||||++.||.. |||||| +|+|+..+.... + .+.+. ++++++|
T Consensus 122 ~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~-----e---~~~~~~~~~~~~i 187 (230)
T 2eg4_A 122 LLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGS--KNAPLELFLSPE-----G---LLERLGLQPGQEV 187 (230)
T ss_dssp BCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTC--EECCGGGGGCCT-----T---HHHHHTCCTTCEE
T ss_pred eeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCCCc--EEcCHHHhCChH-----H---HHHhcCCCCCCCE
Confidence 477777765 678999999999999 999999 999997552211 1 22222 5889999
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 142 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~ 142 (153)
|+||++|.+|..++..|+++| .+|++|.||+.+|.++|+|+++
T Consensus 188 v~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 188 GVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp EEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred EEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 999999999999999999999 9999999999999999999863
No 48
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.83 E-value=1.4e-20 Score=154.87 Aligned_cols=107 Identities=23% Similarity=0.321 Sum_probs=96.4
Q ss_pred cceeecHHHHHHHHhC-CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCC
Q 031788 27 EVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 105 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g 105 (153)
....++++++.+++++ +.+|||||++.||..|||||| +|+|.. ++.+.+.++ +++++||+||++|
T Consensus 375 ~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~l~~l-~~~~~ivv~C~sG 440 (539)
T 1yt8_A 375 RADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGA--AWVLRS-----------QLKQALERL-GTAERYVLTCGSS 440 (539)
T ss_dssp CCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTC--EECCGG-----------GHHHHHHHH-CCCSEEEEECSSS
T ss_pred cCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCc--hhCCHH-----------HHHHHHHhC-CCCCeEEEEeCCC
Confidence 4578999999999876 478999999999999999999 999985 676766654 8899999999999
Q ss_pred ccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCCC
Q 031788 106 ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPA 147 (153)
Q Consensus 106 ~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~~~ 147 (153)
.+|..++..|+.+||.+|++|.||+.+|.++|+|++++.++.
T Consensus 441 ~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~~~~~~ 482 (539)
T 1yt8_A 441 LLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGESLL 482 (539)
T ss_dssp HHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSCCB
T ss_pred hHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCcccCCCCC
Confidence 999999999999999999999999999999999999876554
No 49
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.83 E-value=5.6e-21 Score=154.76 Aligned_cols=101 Identities=30% Similarity=0.490 Sum_probs=90.0
Q ss_pred ceeecHHHHHHHHhC-CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCc
Q 031788 28 VITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 106 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~ 106 (153)
...++++++.+.+++ +.+|||||++.||..|||||| +|+|+. ++.+.+.. ++++++||+||++|.
T Consensus 373 ~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~vvv~C~~G~ 438 (474)
T 3tp9_A 373 YANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQA--HHIPLS-----------KLAAHIHD-VPRDGSVCVYCRTGG 438 (474)
T ss_dssp CEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTC--EECCHH-----------HHTTTGGG-SCSSSCEEEECSSSH
T ss_pred ccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHhc-CCCCCEEEEECCCCH
Confidence 467999999998875 589999999999999999999 999996 44444443 588999999999999
Q ss_pred cHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 031788 107 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 142 (153)
Q Consensus 107 ~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~ 142 (153)
+|..++..|+.+||++|+.|.||+.+|.++|+|+++
T Consensus 439 ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 439 RSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp HHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999864
No 50
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.83 E-value=3.5e-21 Score=136.81 Aligned_cols=118 Identities=15% Similarity=0.193 Sum_probs=82.6
Q ss_pred hhhcCCcceeecHHHHHHHHhC--------CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh-
Q 031788 21 CRSSGAEVITVDVRAAKNLLES--------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL- 91 (153)
Q Consensus 21 ~~~~~~~~~~i~~~~~~~~~~~--------~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~- 91 (153)
+......+..|+++++.+++++ +.+|||||+ .||..|||||| +|||+..+..... ..+++.+.+...
T Consensus 23 ~~~~~~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGA--iniP~~~l~~~~~-~l~~l~~~~~~~~ 98 (169)
T 3f4a_A 23 DSYSITNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDG--WHYAYSRLKQDPE-YLRELKHRLLEKQ 98 (169)
T ss_dssp ---CCCSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTC--EECCHHHHHHCHH-HHHHHHHHHHHHH
T ss_pred hhcccCCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCC--EECCHHHhhcccc-cHHHHHHHHHhhc
Confidence 3445667889999999999974 278999999 99999999999 9999963311000 000111111111
Q ss_pred c--cCCCeEEEEeCCC-ccHHHHHHHHHH----CC--ccceeeccccHHHHHhCCCceec
Q 031788 92 C--KEEDRLVVGCQSG-ARSLHATADLLG----AG--FKHVSNFGGGHMAWVQNGLKVKA 142 (153)
Q Consensus 92 ~--~~~~~ivi~c~~g-~~a~~~~~~L~~----~G--~~~v~~l~gG~~~w~~~g~~~~~ 142 (153)
+ ..+++||+||.+| .|+..++..|.+ .| +.+|++|.||+.+|.+++.|.+.
T Consensus 99 ~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 99 ADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp HTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred ccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 1 1247999999987 788888877654 36 57899999999999998776554
No 51
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.82 E-value=2.9e-20 Score=148.84 Aligned_cols=116 Identities=15% Similarity=0.156 Sum_probs=97.1
Q ss_pred ceeecHHHHHHHHhC---------CCeEEecC--ChhhhhcCCCCCcceeCccccccC--CCCCCCCh-HHHHHHHhh-c
Q 031788 28 VITVDVRAAKNLLES---------GYGYLDVR--TAEEFKEGHVDAAKIFNIPYMFNT--PEGRVKNP-DFLKKVRSL-C 92 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~---------~~~iIDvR--~~~e~~~ghi~ga~~i~ip~~~~~--~~~~~~~~-~~~~~~~~~-~ 92 (153)
...++++++.++++. +.+||||| ++.+|..|||||| +|+|+..+. +.+.+..+ +|.+.+.+. +
T Consensus 123 ~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA--~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi 200 (423)
T 2wlr_A 123 EQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGA--DYIDTNEVESEPLWNKVSDEQLKAMLAKHGI 200 (423)
T ss_dssp GGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTC--EEEEGGGTEETTTTEECCHHHHHHHHHHTTC
T ss_pred CcccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCc--EEcCHHHhccCCCCCCCCHHHHHHHHHHcCC
Confidence 357899999888862 47899999 9999999999999 999997662 23334333 555566555 7
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
+++++||+||++|.+|..+++.|..+||++|++|+||+.+|.+.|+|++++.+
T Consensus 201 ~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~~ 253 (423)
T 2wlr_A 201 RHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTP 253 (423)
T ss_dssp CTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSSC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCCC
Confidence 89999999999999999999999999999999999999999999999988653
No 52
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.80 E-value=3.4e-20 Score=129.26 Aligned_cols=107 Identities=17% Similarity=0.142 Sum_probs=79.6
Q ss_pred CcceeecHHHHHHHHhC---CCeEEecCChhhhhcCCCCCcceeCccccccC---------C-CCCCCChHHHHHHHhhc
Q 031788 26 AEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT---------P-EGRVKNPDFLKKVRSLC 92 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~---~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~---------~-~~~~~~~~~~~~~~~~~ 92 (153)
.....|+++++.+++++ +.+|||||++.||..|||||| +|+|+..+. + ...++.++..+.+.. +
T Consensus 13 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgA--inip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~ 89 (154)
T 1hzm_A 13 EMAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESA--INVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTR-R 89 (154)
T ss_dssp CCSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSC--CCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHH-S
T ss_pred ccccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCc--eEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhc-c
Confidence 34678999999998864 589999999999999999999 999986421 0 012222223334433 4
Q ss_pred cCCCeEEEEeCCCccH-------HHHHHHHHH---CCccceeeccccHHHHHhC
Q 031788 93 KEEDRLVVGCQSGARS-------LHATADLLG---AGFKHVSNFGGGHMAWVQN 136 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a-------~~~~~~L~~---~G~~~v~~l~gG~~~w~~~ 136 (153)
+++++||+||++|.++ ..+++.|+. .||+ |++|.||+.+|.+.
T Consensus 90 ~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 90 CGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp TTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred CCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 6889999999988764 444556665 4999 99999999999875
No 53
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.80 E-value=2.2e-19 Score=126.06 Aligned_cols=113 Identities=17% Similarity=0.168 Sum_probs=79.4
Q ss_pred hcCCcceeecHHHHHHHHh--------C-CCeEEecCChhhhhcCCCCCcceeCccccccC-----CCCCCCChHHHHHH
Q 031788 23 SSGAEVITVDVRAAKNLLE--------S-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT-----PEGRVKNPDFLKKV 88 (153)
Q Consensus 23 ~~~~~~~~i~~~~~~~~~~--------~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~-----~~~~~~~~~~~~~~ 88 (153)
.....+..|+++++.++++ + +.+|||||++.||..|||||| +|+|+..+. ..+.+. +...+
T Consensus 5 ~~~~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga--~~i~~~~l~~~~~~~~~~~~---~~~~~ 79 (158)
T 3tg1_B 5 KQLASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGA--VHINCADKISRRRLQQGKIT---VLDLI 79 (158)
T ss_dssp ------CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTC--EECCCSSHHHHHHHTTSSCC---HHHHT
T ss_pred CCCCCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCc--eeechhHHHHHhhhhcCccc---HHhhc
Confidence 4556788999999999987 2 389999999999999999999 999996321 000010 00000
Q ss_pred H------hh-ccCCCeEEEEeCCCc---------cHHHHHHHHHHCCccceeeccccHHHHHhCCCcee
Q 031788 89 R------SL-CKEEDRLVVGCQSGA---------RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 141 (153)
Q Consensus 89 ~------~~-~~~~~~ivi~c~~g~---------~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~ 141 (153)
. .. ..++++||+||++|. ++..+++.|...|| +|++|.||+.+|.+..-...
T Consensus 80 ~~~~~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~p~~~ 147 (158)
T 3tg1_B 80 SCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLC 147 (158)
T ss_dssp CCCCSSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSCGGGB
T ss_pred CCHHHHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHhhhhc
Confidence 0 00 124789999999884 58899999999999 69999999999987654443
No 54
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.79 E-value=1.3e-19 Score=149.90 Aligned_cols=100 Identities=26% Similarity=0.409 Sum_probs=88.6
Q ss_pred hcCCcceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEe
Q 031788 23 SSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGC 102 (153)
Q Consensus 23 ~~~~~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c 102 (153)
.....+..|+++++.++++++.+|||||++.||..|||||| +|+|+. ++.+.+.. ++++++||+||
T Consensus 483 ~~~~~~~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga--~~ip~~-----------~l~~~~~~-l~~~~~iv~~C 548 (588)
T 3ics_A 483 IVDGFVDTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGS--INIPLD-----------ELRDRLEE-VPVDKDIYITC 548 (588)
T ss_dssp HHTTSCCEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTE--EECCHH-----------HHTTCGGG-SCSSSCEEEEC
T ss_pred ccccccceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCC--EECCHH-----------HHHHHHhh-CCCCCeEEEEC
Confidence 45677889999999999988899999999999999999999 999995 44444444 48899999999
Q ss_pred CCCccHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 031788 103 QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 137 (153)
Q Consensus 103 ~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g 137 (153)
++|.||..+++.|++.||+ |+.|.||+.+|++..
T Consensus 549 ~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 549 QLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp SSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred CCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence 9999999999999999999 999999999998753
No 55
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.79 E-value=5.2e-20 Score=151.33 Aligned_cols=98 Identities=21% Similarity=0.361 Sum_probs=84.6
Q ss_pred cCCcceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeC
Q 031788 24 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ 103 (153)
Q Consensus 24 ~~~~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~ 103 (153)
.......|+++++.++ +++.+|||||++.||..+||||| +|+|+. ++.+.+.+ ++++++||+||+
T Consensus 468 ~~~~~~~i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga--~~ip~~-----------~l~~~~~~-~~~~~~iv~~c~ 532 (565)
T 3ntd_A 468 IKGDATPIHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGA--VNIPVD-----------ELRDRMHE-LPKDKEIIIFSQ 532 (565)
T ss_dssp HHTSCCEECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTC--EECCGG-----------GTTTSGGG-SCTTSEEEEECS
T ss_pred cccccceeeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCc--EECCHH-----------HHHHHHhh-cCCcCeEEEEeC
Confidence 4456778999988777 55689999999999999999999 999996 33333333 488999999999
Q ss_pred CCccHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 031788 104 SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 137 (153)
Q Consensus 104 ~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g 137 (153)
+|.||..+++.|++.|| +|++|.||+.+|+++|
T Consensus 533 ~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 533 VGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp SSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred CchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 99999999999999999 9999999999999875
No 56
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.76 E-value=7.7e-19 Score=138.69 Aligned_cols=100 Identities=19% Similarity=0.336 Sum_probs=78.9
Q ss_pred CCCeEEecCChhhhh-----------cCCCCCcceeCccccccC---CCCC-CCCh-HHHHHHHhh---ccC---CCeEE
Q 031788 42 SGYGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFNT---PEGR-VKNP-DFLKKVRSL---CKE---EDRLV 99 (153)
Q Consensus 42 ~~~~iIDvR~~~e~~-----------~ghi~ga~~i~ip~~~~~---~~~~-~~~~-~~~~~~~~~---~~~---~~~iv 99 (153)
.+.+|||||++.||. .|||||| +|||+..+. +++. +..+ ++.+.+.+. +++ +++||
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGA--iniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~iv 250 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGA--RNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFV 250 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTC--EECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSE
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCc--EEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEE
Confidence 457899999999999 9999999 999997653 2222 3333 344444432 367 89999
Q ss_pred EEeCCCccHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecC
Q 031788 100 VGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAR 143 (153)
Q Consensus 100 i~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~-~g~~~~~~ 143 (153)
+||++|.||..++..|..+||+||++|.||+.+|.. .++|++++
T Consensus 251 vyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 251 FSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp EECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred EECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 999999999999999999999999999999999997 68887544
No 57
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.75 E-value=9.6e-18 Score=117.55 Aligned_cols=121 Identities=9% Similarity=0.095 Sum_probs=82.4
Q ss_pred CCcceeecHHHHHHHHhC---CCeEEecCChhhhhcCCCCCcceeCccccccCCCC-------CCCChHHHHHHHhhccC
Q 031788 25 GAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEG-------RVKNPDFLKKVRSLCKE 94 (153)
Q Consensus 25 ~~~~~~i~~~~~~~~~~~---~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~-------~~~~~~~~~~~~~~~~~ 94 (153)
......|+++++.+++++ +.+|||||++.||..|||||| +|||...+.+.. .++. ...+.+.+. .+
T Consensus 11 ~~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~ga--inip~~~~~~~~~~~~l~~~lp~-~~~~~~~~~-~~ 86 (157)
T 1whb_A 11 TKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS--LSVPEEAISPGVTASWIEAHLPD-DSKDTWKKR-GN 86 (157)
T ss_dssp CCCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTC--EEECSSSCCTTCCHHHHHHSCCT-THHHHHHGG-GT
T ss_pred cccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCC--cccCHHHccCCCcHHHHHHHCCh-HHHHHHHhc-CC
Confidence 355778999999999874 478999999999999999999 999986442211 0111 111111111 23
Q ss_pred CCeEEEEeCCCcc----HHHHHHHHHH----C----Cccc-eeeccccHHHHHhCCCceecCCCCCCCC
Q 031788 95 EDRLVVGCQSGAR----SLHATADLLG----A----GFKH-VSNFGGGHMAWVQNGLKVKAREKPADHR 150 (153)
Q Consensus 95 ~~~ivi~c~~g~~----a~~~~~~L~~----~----G~~~-v~~l~gG~~~w~~~g~~~~~~~~~~~~~ 150 (153)
.+.||+||.++.+ +..+++.|.+ . ||.+ |++|.||+.+|.+. +|.....+....+
T Consensus 87 ~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~~~~~p 154 (157)
T 1whb_A 87 VEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNAKVSGP 154 (157)
T ss_dssp SSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCCCCCCC
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCCCCCCC
Confidence 4569999986643 3556667662 2 4543 99999999999985 8877666544443
No 58
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.74 E-value=2.2e-17 Score=128.14 Aligned_cols=119 Identities=14% Similarity=0.050 Sum_probs=92.9
Q ss_pred cCCcceeecHHHHHHHHhCC----CeEEecC---------Chhhh-hcCCCCCcceeCcccccc-CCC----CCCCC-hH
Q 031788 24 SGAEVITVDVRAAKNLLESG----YGYLDVR---------TAEEF-KEGHVDAAKIFNIPYMFN-TPE----GRVKN-PD 83 (153)
Q Consensus 24 ~~~~~~~i~~~~~~~~~~~~----~~iIDvR---------~~~e~-~~ghi~ga~~i~ip~~~~-~~~----~~~~~-~~ 83 (153)
.++.+..||++++.++++++ +++||++ ...|| +++||||| +++++..+ .+. ..++. ..
T Consensus 23 sm~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGA--v~~Dld~~~d~~~~~ph~LP~~~~ 100 (327)
T 3utn_X 23 SMPLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNS--IFFDIDAISDKKSPYPHMFPTKKV 100 (327)
T ss_dssp -CCSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTC--EECCTTTSSCTTSSSTTCCCCHHH
T ss_pred cCccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCC--eeeChHHhcCCCCCCCCCCcCHHH
Confidence 45556789999999999743 6789985 24566 67999999 66665444 111 22333 37
Q ss_pred HHHHHHhh-ccCCCeEEEEeCCC-ccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 84 FLKKVRSL-CKEEDRLVVGCQSG-ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 84 ~~~~~~~~-~~~~~~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
|.+.+.++ |+++++||+|++.+ ..|.+++|.|+.+|+++|++|+|| .+|+++|+|++++..
T Consensus 101 f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~~ 163 (327)
T 3utn_X 101 FDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSKV 163 (327)
T ss_dssp HHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCCC
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCCc
Confidence 88888888 99999999999865 468999999999999999999877 899999999987653
No 59
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.74 E-value=1.5e-17 Score=116.70 Aligned_cols=116 Identities=9% Similarity=0.074 Sum_probs=77.0
Q ss_pred CCcceeecHHHHHHHHhC---CCeEEecCChhhhhcCCCCCcceeCccccccCCCCC-------CCChHHHHHHHhhccC
Q 031788 25 GAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGR-------VKNPDFLKKVRSLCKE 94 (153)
Q Consensus 25 ~~~~~~i~~~~~~~~~~~---~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~-------~~~~~~~~~~~~~~~~ 94 (153)
......|+++++.+++++ +.+|||||++.||..|||||| +|||...+.+... ++ +....+.....+
T Consensus 16 ~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gA--inip~~~l~~~~~~~~l~~~lp--~~~~~l~~~~~~ 91 (157)
T 2gwf_A 16 PRGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS--LSVPEEAISPGVTASWIEAHLP--DDSKDTWKKRGN 91 (157)
T ss_dssp ---CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTC--EECCGGGCCTTCCHHHHHHTSC--HHHHHHHHTTTT
T ss_pred cCCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCC--cccCHHHcCCCCcHHHHHHHcC--HHHHHHHHhcCC
Confidence 445678999999999874 478999999999999999999 9999875532210 11 111111111124
Q ss_pred CCeEEEEeCCCcc----HHHHHHHHH----HC----Cccc-eeeccccHHHHHhCCCceecCCC
Q 031788 95 EDRLVVGCQSGAR----SLHATADLL----GA----GFKH-VSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 95 ~~~ivi~c~~g~~----a~~~~~~L~----~~----G~~~-v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
.+.||+||.++.+ +..+++.|. +. |+.+ |++|.||+.+|.+. +|.....+
T Consensus 92 ~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~ 154 (157)
T 2gwf_A 92 VEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNA 154 (157)
T ss_dssp SSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBSCC
T ss_pred CCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcCCC
Confidence 4568999986643 344555554 32 4543 99999999999984 77655443
No 60
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.73 E-value=8.1e-18 Score=124.47 Aligned_cols=94 Identities=15% Similarity=0.117 Sum_probs=73.3
Q ss_pred CCeEEecCChhhhhcCCCCCcceeCcccc--ccCCCC---CCC-ChHHHHHHHhhccCCCeEEEEeCCCc-cHHHHHHHH
Q 031788 43 GYGYLDVRTAEEFKEGHVDAAKIFNIPYM--FNTPEG---RVK-NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHATADL 115 (153)
Q Consensus 43 ~~~iIDvR~~~e~~~ghi~ga~~i~ip~~--~~~~~~---~~~-~~~~~~~~~~~~~~~~~ivi~c~~g~-~a~~~~~~L 115 (153)
+.+|||||++.+|..|||||| +|+|+. .+.... .++ ..+|.+.+.++ ..+++||+||++|. +|.++++.|
T Consensus 6 ~~~iiDvR~~~ey~~ghIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivvyc~~g~~~s~~a~~~L 82 (230)
T 2eg4_A 6 DAVLVDTRPRPAYEAGHLPGA--RHLDLSAPKLRLREEAELKALEGGLTELFQTL-GLRSPVVLYDEGLTSRLCRTAFFL 82 (230)
T ss_dssp TCEEEECSCHHHHHHCBCTTC--EECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT-TCCSSEEEECSSSCHHHHHHHHHH
T ss_pred CEEEEECCChhhHhhCcCCCC--EECCccchhcccCCCCCcCCCHHHHHHHHHhc-CCCCEEEEEcCCCCccHHHHHHHH
Confidence 478999999999999999999 999986 332100 000 02455555555 45899999999988 899999999
Q ss_pred HHCCccceeeccccHHHHHhCCCceecCCC
Q 031788 116 LGAGFKHVSNFGGGHMAWVQNGLKVKAREK 145 (153)
Q Consensus 116 ~~~G~~~v~~l~gG~~~w~~~g~~~~~~~~ 145 (153)
+ +||+||++|+|| |.+ +|++++.+
T Consensus 83 ~-~G~~~v~~l~GG---W~~--~p~~~~~~ 106 (230)
T 2eg4_A 83 G-LGGLEVQLWTEG---WEP--YATEKEEP 106 (230)
T ss_dssp H-HTTCCEEEECSS---CGG--GCCBCSCC
T ss_pred H-cCCceEEEeCCC---Ccc--CcccCCCC
Confidence 9 999999999999 987 78766543
No 61
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.73 E-value=5e-18 Score=137.46 Aligned_cols=105 Identities=18% Similarity=0.231 Sum_probs=91.7
Q ss_pred CCcceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 25 GAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 25 ~~~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
......++++++.+.++++ +|||||++.+|..|||||| +|+|+. ..|.+++.++.+++++||+||..
T Consensus 269 ~~~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA--~~i~~~----------~~~~~~~~~l~~~~~~vvvy~~~ 335 (474)
T 3tp9_A 269 APERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGS--LNIPWN----------KSFVTWAGWLLPADRPIHLLAAD 335 (474)
T ss_dssp CCEECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTC--EECCSS----------TTHHHHHHHHCCSSSCEEEECCT
T ss_pred cCCCceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCe--EEECcc----------hHHHHHHHhcCCCCCeEEEEECC
Confidence 4456789999999999887 9999999999999999999 999984 25888888877889999999997
Q ss_pred CccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecC
Q 031788 105 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAR 143 (153)
Q Consensus 105 g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~ 143 (153)
+. +.++++.|+.+||++|+.+.+|+.+|..++.++...
T Consensus 336 ~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~ 373 (474)
T 3tp9_A 336 AI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASY 373 (474)
T ss_dssp TT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECC
T ss_pred Cc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccccc
Confidence 76 677999999999999998777999999998877643
No 62
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.70 E-value=1.1e-18 Score=141.35 Aligned_cols=86 Identities=27% Similarity=0.370 Sum_probs=0.0
Q ss_pred HHHHHhC-CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCccHHHHHHH
Q 031788 36 AKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATAD 114 (153)
Q Consensus 36 ~~~~~~~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~ 114 (153)
+.+.+++ +.+|||||++.||..|||||| +|+|+. ++.+.+.+ ++++++||+||++|.||..++..
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~iv~~C~~G~rs~~a~~~ 444 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQA--VHVPHG-----------KLLETDLP-FNKNDVIYVHCQSGIRSSIAIGI 444 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCC--EECCHH-----------HHHHHHhh-CCCCCeEEEECCCChHHHHHHHH
Confidence 3444443 478999999999999999999 999996 44444444 47899999999999999999999
Q ss_pred HHHCCccceeeccccHHHHHh
Q 031788 115 LLGAGFKHVSNFGGGHMAWVQ 135 (153)
Q Consensus 115 L~~~G~~~v~~l~gG~~~w~~ 135 (153)
|+.+||++|++|.||+.+|++
T Consensus 445 L~~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 445 LEHKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp ---------------------
T ss_pred HHHcCCCCEEEecChHHHHhh
Confidence 999999999999999999975
No 63
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.68 E-value=2e-16 Score=122.83 Aligned_cols=106 Identities=23% Similarity=0.438 Sum_probs=82.9
Q ss_pred eecHHHHHHHHhCC-----CeEEecCChhhhh-----------cCCCCCcceeCcccccc-CCCCCCC-C-hH-----HH
Q 031788 30 TVDVRAAKNLLESG-----YGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFN-TPEGRVK-N-PD-----FL 85 (153)
Q Consensus 30 ~i~~~~~~~~~~~~-----~~iIDvR~~~e~~-----------~ghi~ga~~i~ip~~~~-~~~~~~~-~-~~-----~~ 85 (153)
.++.+++.+.++++ .+|||+|++.+|. .|||||| +|+|+..+ ++++... . .+ +.
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA--~nlP~~~~ld~~~~~~~~~~e~l~~~l~ 262 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGT--QPLPYGSLLDPETKTYPEAGEAIHATLE 262 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTE--EECCGGGGSCTTTCCCCCTTHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCC--cccChhhccCCCCCCCCCcHHHHHHHHH
Confidence 46778888887653 6899999999995 4999999 99999877 3333322 1 12 22
Q ss_pred HHHHhh---ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 031788 86 KKVRSL---CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 137 (153)
Q Consensus 86 ~~~~~~---~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g 137 (153)
+.+... ++++++||+||++|.+|..++..|..+||++|.+|+|++..|....
T Consensus 263 ~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~ 317 (327)
T 3utn_X 263 KALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKS 317 (327)
T ss_dssp HHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhcccc
Confidence 222222 6789999999999999999999999999999999999999998753
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.41 E-value=3e-13 Score=109.43 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=65.6
Q ss_pred CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 42 SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 42 ~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
.+.+|||+|++.+|..|||||| +|+|.. ..|..++.+.++++++||+||. +.++.++++.|..+||+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGA--v~ip~~----------~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~ 361 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGT--INIPYD----------KNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYD 361 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTC--EECCSS----------TTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCC
T ss_pred CCeEEEECCCHHHHhhCCCCCc--EECCcc----------HHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhcc
Confidence 4578999999999999999999 999984 2577888877889999999998 55789999999999999
Q ss_pred ceee-ccccHHHH
Q 031788 122 HVSN-FGGGHMAW 133 (153)
Q Consensus 122 ~v~~-l~gG~~~w 133 (153)
+|+. +.|+...|
T Consensus 362 ~v~~~l~g~~~~~ 374 (466)
T 3r2u_A 362 DIAGYQLPQSKIQ 374 (466)
T ss_dssp CEEEEECCC----
T ss_pred cccccccCccccc
Confidence 9987 66655444
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.04 E-value=1e-05 Score=55.91 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=52.5
Q ss_pred eecHHHHHHHHhCC-CeEEecCChhh------------hhcC-CCCCcceeCccccccCCCCCCCChHHHHHHHhh-ccC
Q 031788 30 TVDVRAAKNLLESG-YGYLDVRTAEE------------FKEG-HVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKE 94 (153)
Q Consensus 30 ~i~~~~~~~~~~~~-~~iIDvR~~~e------------~~~g-hi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~-~~~ 94 (153)
.++++++..+.+.+ ..|||+|++.| +..+ +|.|. +++|.... .+. ++....+.+. -+.
T Consensus 29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~--~~iPv~~~----~~~-~~~~~~~~~~l~~~ 101 (156)
T 2f46_A 29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGF--HHQPVTAR----DIQ-KHDVETFRQLIGQA 101 (156)
T ss_dssp CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEE--EECCCCTT----TCC-HHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhh--eECccCCC----CCC-HHHHHHHHHHHHhC
Confidence 46777887776656 68999998766 2233 47666 99998532 112 2233323332 235
Q ss_pred CCeEEEEeCCCccHHHHHH-HHHHCCcc
Q 031788 95 EDRLVVGCQSGARSLHATA-DLLGAGFK 121 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~-~L~~~G~~ 121 (153)
+++|++||.+|.|+..++. .|...|.+
T Consensus 102 ~~pVlvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 102 EYPVLAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp CSSEEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 8899999999998764433 23445654
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=97.06 E-value=0.0012 Score=44.50 Aligned_cols=86 Identities=14% Similarity=0.120 Sum_probs=52.0
Q ss_pred cHHHHHHHHhCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCCh----HHHHHHHhhccCCCeEEEEeCCCc
Q 031788 32 DVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSLCKEEDRLVVGCQSGA 106 (153)
Q Consensus 32 ~~~~~~~~~~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ivi~c~~g~ 106 (153)
+.+++..+.+.+ ..|||+|++.+......+|..++++|..... .+.. ++.+.+......+.+|+++|..|.
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~ 99 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFC----PPAPDQIDRFVQIVDEANARGEAVGVHCALGF 99 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTS----CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCCC----CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 356665555556 6899999987765555566667777774331 1122 223333333456789999999886
Q ss_pred -cHH-HHHHHHHH-CCcc
Q 031788 107 -RSL-HATADLLG-AGFK 121 (153)
Q Consensus 107 -~a~-~~~~~L~~-~G~~ 121 (153)
|+. .++.+|.. .|.+
T Consensus 100 ~Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 100 GRTGTMLACYLVKERGLA 117 (150)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 765 44444443 5653
No 67
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=96.44 E-value=0.007 Score=40.52 Aligned_cols=86 Identities=14% Similarity=0.127 Sum_probs=49.0
Q ss_pred cHHHHHHHHhCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCCh-H---HHHHHHhhccCCCeEEEEeCCCc
Q 031788 32 DVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP-D---FLKKVRSLCKEEDRLVVGCQSGA 106 (153)
Q Consensus 32 ~~~~~~~~~~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~ivi~c~~g~ 106 (153)
+.+++..+.+.+ ..|||+|+..++....+++..+.++|..+.. .+.. . +.+.+.+....+.+|+++|..|.
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~----~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~ 100 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFC----PPAPDQIDRFVQIVDEANARGEAVGVHCALGF 100 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTC----CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCC----CCCHHHHHHHHHHHHHHHhCCCcEEEECCCCC
Confidence 445554444455 6899999986655444555455777764321 1112 2 23333332456889999999775
Q ss_pred -cHH-HHHHHHHHC-Ccc
Q 031788 107 -RSL-HATADLLGA-GFK 121 (153)
Q Consensus 107 -~a~-~~~~~L~~~-G~~ 121 (153)
|+. .++.+|... |.+
T Consensus 101 ~Rsg~~~~~~l~~~~~~~ 118 (151)
T 2img_A 101 GRTGTMLACYLVKERGLA 118 (151)
T ss_dssp SHHHHHHHHHHHHHHCCC
T ss_pred ChHHHHHHHHHHHHhCcC
Confidence 654 444455444 653
No 68
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=95.68 E-value=0.018 Score=38.79 Aligned_cols=90 Identities=11% Similarity=0.102 Sum_probs=48.6
Q ss_pred cHHHHHHHHhCC-CeEEecCChhhhhcC----CCCCcceeCcccccc-CCCCCCCChHHHHHHHhhc-cCCCeEEEEeCC
Q 031788 32 DVRAAKNLLESG-YGYLDVRTAEEFKEG----HVDAAKIFNIPYMFN-TPEGRVKNPDFLKKVRSLC-KEEDRLVVGCQS 104 (153)
Q Consensus 32 ~~~~~~~~~~~~-~~iIDvR~~~e~~~g----hi~ga~~i~ip~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ivi~c~~ 104 (153)
+..++..+-+-+ ..|||+|+..+.... .-.|..++++|.... .+...+..+.+.+.+..+. ..+.+|+++|..
T Consensus 22 ~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~a 101 (151)
T 1xri_A 22 DSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKR 101 (151)
T ss_dssp CHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSS
T ss_pred CccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECCC
Confidence 445554444445 689999987653210 012345677777432 1111222223434333332 357899999998
Q ss_pred Cc-cHHHH-HHHHHHCCcc
Q 031788 105 GA-RSLHA-TADLLGAGFK 121 (153)
Q Consensus 105 g~-~a~~~-~~~L~~~G~~ 121 (153)
|. |+..+ +-.|...|.+
T Consensus 102 G~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 102 GKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp SSSHHHHHHHHHHHHTTBC
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 85 76544 4445556754
No 69
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=95.53 E-value=0.015 Score=39.18 Aligned_cols=88 Identities=13% Similarity=0.077 Sum_probs=47.2
Q ss_pred HHHHHHHh-CC-CeEEecCChhhhhcC-------CCCCcceeCccccccCCCCCCC-ChHHHHHHHhhccCCCeEEEEeC
Q 031788 34 RAAKNLLE-SG-YGYLDVRTAEEFKEG-------HVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKEEDRLVVGCQ 103 (153)
Q Consensus 34 ~~~~~~~~-~~-~~iIDvR~~~e~~~g-------hi~ga~~i~ip~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivi~c~ 103 (153)
.+..++++ .+ ..|||+|++.+.... .-.|-.++++|........... -.++.+.+......+.+|+++|.
T Consensus 18 ~~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~ 97 (157)
T 3rgo_A 18 NMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCK 97 (157)
T ss_dssp GGHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHHHHHHHHHHTTCEEEEESS
T ss_pred cchHHHHHHcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 44555544 45 579999987664321 1124456777775331111000 01222333333456789999999
Q ss_pred CCc-cHHHH-HHHHH-HCCcc
Q 031788 104 SGA-RSLHA-TADLL-GAGFK 121 (153)
Q Consensus 104 ~g~-~a~~~-~~~L~-~~G~~ 121 (153)
.|. |+..+ +.+|. ..|.+
T Consensus 98 ~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 98 AGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp SSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCChHHHHHHHHHHHHcCCC
Confidence 886 76644 44444 35653
No 70
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=95.37 E-value=0.11 Score=39.38 Aligned_cols=45 Identities=18% Similarity=0.239 Sum_probs=32.1
Q ss_pred ceeecHHHHHHHHhCC-CeEEecCChhhhhcC----CCCCcceeCccccc
Q 031788 28 VITVDVRAAKNLLESG-YGYLDVRTAEEFKEG----HVDAAKIFNIPYMF 72 (153)
Q Consensus 28 ~~~i~~~~~~~~~~~~-~~iIDvR~~~e~~~g----hi~ga~~i~ip~~~ 72 (153)
...++++++..+.+-+ ..|||.|++.|.... ..+|..++++|...
T Consensus 53 l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~~ 102 (296)
T 1ywf_A 53 LSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFPD 102 (296)
T ss_dssp CTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCCC
T ss_pred cccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCcc
Confidence 4457788887665546 689999998885432 35677788888754
No 71
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=95.26 E-value=0.03 Score=37.59 Aligned_cols=80 Identities=14% Similarity=0.137 Sum_probs=41.2
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHHH-HHHH
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLHA-TADL 115 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~~-~~~L 115 (153)
+.+ ..|||+|++.......-.|..++++|..+... .++.. ++..+.+......+.+|+++|..| .|+..+ +.+|
T Consensus 27 ~~gi~~Vi~l~~e~p~~~~~~~~~~~~~ipi~D~~~-~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl 105 (149)
T 1zzw_A 27 RLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK-QNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYL 105 (149)
T ss_dssp HTTEEEEEECCSSSCCTTGGGTCSEEEECCCCCSSS-CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCCCcccCCCCeEEEEEECCCCCc-ccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCCHHHHHHHHHH
Confidence 345 57899997422111112344567777753311 11110 112223333245688999999988 576653 4444
Q ss_pred H-HCCcc
Q 031788 116 L-GAGFK 121 (153)
Q Consensus 116 ~-~~G~~ 121 (153)
. ..|.+
T Consensus 106 ~~~~~~~ 112 (149)
T 1zzw_A 106 MKHTRMT 112 (149)
T ss_dssp HHHSCCC
T ss_pred HHHcCCC
Confidence 4 46653
No 72
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=95.11 E-value=0.091 Score=35.27 Aligned_cols=86 Identities=15% Similarity=0.120 Sum_probs=46.1
Q ss_pred HHHHHHhCC-CeEEecCChhhhhc--CC-CCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-cc
Q 031788 35 AAKNLLESG-YGYLDVRTAEEFKE--GH-VDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-AR 107 (153)
Q Consensus 35 ~~~~~~~~~-~~iIDvR~~~e~~~--gh-i~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~ 107 (153)
++..+-+.+ ..|||+|++.|... .. ..|..++++|..... ..++.. ++..+.+......+.+|+++|..| .|
T Consensus 25 d~~~L~~~gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~-~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~R 103 (154)
T 2r0b_A 25 KLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNP-VENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISR 103 (154)
T ss_dssp GHHHHHHTTCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSST-TSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSH
T ss_pred cHHHHHHcCCeEEEEeCCccccccCCCCCcCceeEEEEECCCCC-cccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCh
Confidence 333333445 68899998776421 12 234456777765332 122211 112223333245689999999988 57
Q ss_pred HHH-HHHHHH-HCCcc
Q 031788 108 SLH-ATADLL-GAGFK 121 (153)
Q Consensus 108 a~~-~~~~L~-~~G~~ 121 (153)
+.. ++.+|. ..|.+
T Consensus 104 S~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 104 SAAFVIAYIMETFGMK 119 (154)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCC
Confidence 764 444444 45653
No 73
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=95.06 E-value=0.052 Score=36.86 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=42.8
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHH-HHHHH
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLH-ATADL 115 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~-~~~~L 115 (153)
+.+ ..|||+|+..+. ...|..++++|..+... ..+.. .+..+.+......+.+|+++|..| .|+.. ++.+|
T Consensus 31 ~~gI~~Vi~l~~~~~~---~~~~i~~~~ipi~D~~~-~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayl 106 (160)
T 1yz4_A 31 RNKITHIISIHESPQP---LLQDITYLRIPVADTPE-VPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYV 106 (160)
T ss_dssp HTTCCEEEEECSSCCC---CCTTCEEEEECCCSCTT-SCGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHHHHHH
T ss_pred HCCCeEEEEccCCCCC---ccCCCeEEEEECCCCCC-ccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHHHHH
Confidence 345 689999986432 23455667777753321 11111 122333333345688999999988 57763 34444
Q ss_pred -HHCCcc
Q 031788 116 -LGAGFK 121 (153)
Q Consensus 116 -~~~G~~ 121 (153)
...|.+
T Consensus 107 m~~~~~~ 113 (160)
T 1yz4_A 107 MTVTGLG 113 (160)
T ss_dssp HHHHCCC
T ss_pred HHHcCCC
Confidence 445653
No 74
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=94.81 E-value=0.084 Score=36.08 Aligned_cols=76 Identities=17% Similarity=0.247 Sum_probs=42.7
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHHH-HHHH
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLHA-TADL 115 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~~-~~~L 115 (153)
+.+ ..|||+|+..+. ...|..++++|..... ..++.. .+..+.+......+.+|+++|..| .|+..+ +.+|
T Consensus 30 ~~gI~~Vi~l~~~~~~---~~~~i~~~~ip~~D~~-~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayL 105 (165)
T 1wrm_A 30 KNKVTHILSVHDSARP---MLEGVKYLCIPAADSP-SQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYI 105 (165)
T ss_dssp HTTEEEEEECSTTCCC---CSTTCEEEECCCCSST-TSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCCC---CCCCCeEEEEECCCCC-CccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHHHHHH
Confidence 345 578999986542 2345566778875432 122211 122233333245788999999988 577653 4455
Q ss_pred H-HCCc
Q 031788 116 L-GAGF 120 (153)
Q Consensus 116 ~-~~G~ 120 (153)
. ..|.
T Consensus 106 m~~~~~ 111 (165)
T 1wrm_A 106 MTVTDF 111 (165)
T ss_dssp HHTSSC
T ss_pred HHHcCC
Confidence 4 3454
No 75
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=94.68 E-value=0.06 Score=36.71 Aligned_cols=78 Identities=14% Similarity=0.194 Sum_probs=42.6
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHHH-HHH-
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLHA-TAD- 114 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~~-~~~- 114 (153)
+.+ ..|||+|++.+. ....|..++++|...... .++.. .+..+.+......+.+|+++|..| .|+..+ +.+
T Consensus 35 ~~gI~~Vi~l~~~~~~--~~~~~~~~~~ip~~D~~~-~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayL 111 (164)
T 2hcm_A 35 RAGITLCVNVSRQQPG--PRAPGVAELRVPVFDDPA-EDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYL 111 (164)
T ss_dssp HTTEEEEEECSSSCCC--CCCTTCEEEECCCCSCTT-SCCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHHHHHHH
T ss_pred HCCCeEEEEcCCCCCC--CCCCCCEEEEEeCcCCCC-chHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHH
Confidence 345 578999986542 223455667778753311 11110 122222333245689999999988 576633 334
Q ss_pred HHHCCcc
Q 031788 115 LLGAGFK 121 (153)
Q Consensus 115 L~~~G~~ 121 (153)
+...|++
T Consensus 112 m~~~~~~ 118 (164)
T 2hcm_A 112 MRHRGHS 118 (164)
T ss_dssp HHHSCCC
T ss_pred HHHhCCC
Confidence 4456653
No 76
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=94.64 E-value=0.088 Score=37.02 Aligned_cols=77 Identities=13% Similarity=0.138 Sum_probs=42.5
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHH-HHHH-
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLH-ATAD- 114 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~-~~~~- 114 (153)
+.+ ..|||+|.+.+ ....+|..++++|..+... .++.. .+..+.+......+.+|+++|..| .|+.. ++.+
T Consensus 49 ~~gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~-~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayL 125 (190)
T 2wgp_A 49 ARGITCIVNATIEIP--NFNWPQFEYVKVPLADMPH-APIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYL 125 (190)
T ss_dssp HTTCCEEEECCSSSC--CCCCTTSEEEECCCCSSTT-SCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCC--CCCCCCCEEEEEEcccCCC-CCHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHH
Confidence 345 68999997543 2234566677788753321 11111 122233333345688999999988 57653 3333
Q ss_pred HHHCCc
Q 031788 115 LLGAGF 120 (153)
Q Consensus 115 L~~~G~ 120 (153)
+...|+
T Consensus 126 m~~~~~ 131 (190)
T 2wgp_A 126 MKFHNV 131 (190)
T ss_dssp HHHHCC
T ss_pred HHHcCC
Confidence 444564
No 77
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=94.44 E-value=0.11 Score=34.58 Aligned_cols=78 Identities=19% Similarity=0.138 Sum_probs=41.6
Q ss_pred HHhCC-CeEEecCChhhhhcCCCC-CcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHH-HH
Q 031788 39 LLESG-YGYLDVRTAEEFKEGHVD-AAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLH-AT 112 (153)
Q Consensus 39 ~~~~~-~~iIDvR~~~e~~~ghi~-ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~-~~ 112 (153)
+-+.+ ..|||+|++.+- ..+ +-.+.++|..+.. ..++.. ++..+.+.+....+.+|+++|..| .||.. ++
T Consensus 25 L~~~gi~~Vi~l~~~~~~---~~~~~~~~~~ipi~D~~-~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~v~ 100 (145)
T 2nt2_A 25 LQNRGVRYILNVTREIDN---FFPGVFEYHNIRVYDEE-ATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVI 100 (145)
T ss_dssp HHHTTEEEEEECCSSSCC---SCBTTBEEEECCCCSST-TCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHH
T ss_pred HHHCCCCEEEEeCCCCcc---CCCCCcEEEEEEEeCCC-CCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHH
Confidence 33445 578999975431 122 3345677775432 122211 122223333245688999999988 57754 34
Q ss_pred HHH-HHCCc
Q 031788 113 ADL-LGAGF 120 (153)
Q Consensus 113 ~~L-~~~G~ 120 (153)
.+| ...|+
T Consensus 101 ayLm~~~~~ 109 (145)
T 2nt2_A 101 AYAMKEYGW 109 (145)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhCC
Confidence 444 44564
No 78
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=94.04 E-value=0.14 Score=36.46 Aligned_cols=86 Identities=15% Similarity=0.129 Sum_probs=47.0
Q ss_pred cHHHHHHHHhCC-CeEEecCChhhhhcCCC---------CCcceeCccccccCCCCCCCC-h---HHHHHHHhhccCCCe
Q 031788 32 DVRAAKNLLESG-YGYLDVRTAEEFKEGHV---------DAAKIFNIPYMFNTPEGRVKN-P---DFLKKVRSLCKEEDR 97 (153)
Q Consensus 32 ~~~~~~~~~~~~-~~iIDvR~~~e~~~ghi---------~ga~~i~ip~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~ 97 (153)
..+++..+.+.+ ..|||+|+..|.....+ .|..++++|.... ..+. . ++.+.+...+..+.+
T Consensus 60 ~~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~----~~p~~~~~~~~~~~i~~~~~~~~~ 135 (212)
T 1fpz_A 60 VQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG----GTPDIASCCEIMEELTTCLKNYRK 135 (212)
T ss_dssp HHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT----CCCCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCC----CCCCHHHHHHHHHHHHHHHhCCCC
Confidence 344554444445 68999999866433211 2334566776422 1111 1 233333332457889
Q ss_pred EEEEeCCCc-cHH-HHHHHHHHC--Ccc
Q 031788 98 LVVGCQSGA-RSL-HATADLLGA--GFK 121 (153)
Q Consensus 98 ivi~c~~g~-~a~-~~~~~L~~~--G~~ 121 (153)
|+++|..|. |+. .++.+|... |.+
T Consensus 136 VlVHC~aG~gRTg~~~a~~L~~~~~g~~ 163 (212)
T 1fpz_A 136 TLIHSYGGLGRSCLVAACLLLYLSDTIS 163 (212)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHCSSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHhccCCC
Confidence 999999775 654 445555553 653
No 79
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=93.93 E-value=0.25 Score=32.65 Aligned_cols=78 Identities=18% Similarity=0.114 Sum_probs=42.6
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCC-ChHHHHHHHhhccCCCeEEEEeCCCc-cHH-HHHHHHH
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKEEDRLVVGCQSGA-RSL-HATADLL 116 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivi~c~~g~-~a~-~~~~~L~ 116 (153)
+.+ ..|||++++.. ...-.+-.+.++|..+........ -++..+.+.+....+.+|+++|..|. |+. .++.+|.
T Consensus 27 ~~gI~~Vi~l~~~~~--~~~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm 104 (144)
T 3ezz_A 27 ALGITALLNVSSDCP--NHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLM 104 (144)
T ss_dssp HTTCCEEEECSSSCC--CTTTTTSEEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHH
T ss_pred HCCCeEEEEccCCCC--ccCCCCceEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHHHHH
Confidence 345 68999997432 111123356777876543211111 12333344333456889999999885 665 4455554
Q ss_pred H-CCc
Q 031788 117 G-AGF 120 (153)
Q Consensus 117 ~-~G~ 120 (153)
. .|+
T Consensus 105 ~~~~~ 109 (144)
T 3ezz_A 105 MKKRV 109 (144)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 3 565
No 80
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=93.89 E-value=0.19 Score=35.12 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=42.9
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHH-HHHHH
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLH-ATADL 115 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~-~~~~L 115 (153)
+.+ ..|||+|.+.+ ....+|-.++++|..+... .++.. ++..+.+.+....+.+|+++|..| .||.. ++.+|
T Consensus 43 ~~gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~-~~~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayL 119 (188)
T 2esb_A 43 SNQITMVINVSVEVV--NTLYEDIQYMQVPVADSPN-SRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYL 119 (188)
T ss_dssp HTTCCEEEECCSSCC--CCCCTTCEEEECCCCSCTT-SCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCC-ccHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHH
Confidence 345 67999997542 2233555677788753321 11111 122223333245789999999988 57764 44555
Q ss_pred -HHCCc
Q 031788 116 -LGAGF 120 (153)
Q Consensus 116 -~~~G~ 120 (153)
...|+
T Consensus 120 m~~~~~ 125 (188)
T 2esb_A 120 MKYHAM 125 (188)
T ss_dssp HHHSCC
T ss_pred HHHcCC
Confidence 44665
No 81
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=93.23 E-value=0.17 Score=34.97 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=41.2
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHH---HHHHHhhccCCCeEEEEeCCC-ccHHHH-HHH
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDF---LKKVRSLCKEEDRLVVGCQSG-ARSLHA-TAD 114 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ivi~c~~g-~~a~~~-~~~ 114 (153)
+.+ ..|||+|++.......-.|..++++|..+... .++. +.| .+.+......+.+|+++|..| .|+..+ +.+
T Consensus 31 ~~gI~~Vi~l~~e~p~~~~~~~~i~~~~ipi~D~~~-~~l~-~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~ay 108 (177)
T 2oud_A 31 RLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK-QNLR-QYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAY 108 (177)
T ss_dssp HTTEEEEEECCSSSCCTTTTTTCSEEEECCCCCCSS-CCCH-HHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHH
T ss_pred HCCCcEEEEecCCCCcccccCCCceEEEEECCCCCc-ccHH-HHHHHHHHHHHHHHhcCCcEEEEcCCCCCchHHHHHHH
Confidence 345 57899997422111112344567777753211 1111 122 222332245688999999988 576653 445
Q ss_pred HH-HCCcc
Q 031788 115 LL-GAGFK 121 (153)
Q Consensus 115 L~-~~G~~ 121 (153)
|. ..|.+
T Consensus 109 Lm~~~~~~ 116 (177)
T 2oud_A 109 LMKHTRMT 116 (177)
T ss_dssp HHHTSCCC
T ss_pred HHHHcCCC
Confidence 54 46653
No 82
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=93.11 E-value=0.12 Score=34.51 Aligned_cols=77 Identities=13% Similarity=0.058 Sum_probs=40.2
Q ss_pred CeEEecCChhhhhcCC---CCCcceeCccccccCCCCCCCC--hHHHHHHHhhcc-CCCeEEEEeCCC-ccHH-HHHHHH
Q 031788 44 YGYLDVRTAEEFKEGH---VDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCK-EEDRLVVGCQSG-ARSL-HATADL 115 (153)
Q Consensus 44 ~~iIDvR~~~e~~~gh---i~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~ivi~c~~g-~~a~-~~~~~L 115 (153)
..|||+|++.+..... -.|..++++|.... +..++.. .+..+.+..... .+.+|+++|..| .|+. .++.+|
T Consensus 29 ~~Vi~l~~~~~~~~~~~~~~~~i~~~~ip~~d~-~~~~l~~~~~~~~~~i~~~~~~~~~~vlVHC~aG~~RSg~~~~ayl 107 (151)
T 2e0t_A 29 THVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS-PAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYL 107 (151)
T ss_dssp CEEEETTCCTTCCSCTTHHHHTCEEEECCCCSS-TTSCTHHHHHHHHHHHHHHHHSTTCCEEEECSSSSHHHHHHHHHHH
T ss_pred CEEEEccCCcccCCccccCCCCeEEEEEecccC-CCccHHHHHHHHHHHHHHHHhcCCCcEEEECCCCCChHHHHHHHHH
Confidence 6899999865411111 12345667776532 1111110 122222323233 689999999988 5766 444444
Q ss_pred -HHCCcc
Q 031788 116 -LGAGFK 121 (153)
Q Consensus 116 -~~~G~~ 121 (153)
...|.+
T Consensus 108 ~~~~~~~ 114 (151)
T 2e0t_A 108 MLYHHLT 114 (151)
T ss_dssp HHHSCCC
T ss_pred HHHcCCC
Confidence 456653
No 83
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=93.00 E-value=0.37 Score=33.55 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=46.9
Q ss_pred ecHHHHHHHHhC-C-CeEEecCChhhhhc-CCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCC
Q 031788 31 VDVRAAKNLLES-G-YGYLDVRTAEEFKE-GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSG 105 (153)
Q Consensus 31 i~~~~~~~~~~~-~-~~iIDvR~~~e~~~-ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g 105 (153)
-+.++..+.+.+ + ..|||++.+.+... -...|-.+.++|.....+...-.-.++.+.+.+. .+++.+|+|+|..|
T Consensus 48 ~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i~~~~~pi~d~~~~~~~~~~~~~~~i~~~~~~~~~~~VlVHC~aG 127 (189)
T 3rz2_A 48 ATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAG 127 (189)
T ss_dssp TTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSCEEEECCCCSSSCCCSHHHHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCcEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEECCCC
Confidence 456666676664 4 57899997532110 0111224456664322111000001333333322 25788999999977
Q ss_pred c-cHH-HHHHHHHHCCcc
Q 031788 106 A-RSL-HATADLLGAGFK 121 (153)
Q Consensus 106 ~-~a~-~~~~~L~~~G~~ 121 (153)
. |+. .++.+|...|++
T Consensus 128 ~gRSg~~va~~L~~~g~~ 145 (189)
T 3rz2_A 128 LGRAPVLVALALIEGGMK 145 (189)
T ss_dssp STTHHHHHHHHHHTTTCC
T ss_pred CCHHHHHHHHHHHHcCCC
Confidence 4 654 455666666653
No 84
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=92.88 E-value=0.14 Score=35.47 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=42.6
Q ss_pred CC-CeEEecCChhhhhc-------CCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccC-CCeEEEEeCCCc-cHH
Q 031788 42 SG-YGYLDVRTAEEFKE-------GHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKE-EDRLVVGCQSGA-RSL 109 (153)
Q Consensus 42 ~~-~~iIDvR~~~e~~~-------ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~ivi~c~~g~-~a~ 109 (153)
.+ ..|||+|++.++.. ..-.|-.++++|..+.... ++.. ++..+.+...... +.+|+++|..|. |+.
T Consensus 52 ~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~~~~-~~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~RSg 130 (183)
T 3f81_A 52 LGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEF-NLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSP 130 (183)
T ss_dssp HTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCSTTS-CGGGGHHHHHHHHHHHHHSTTCCEEEECSSSSSHHH
T ss_pred CCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCCCcc-cHHHHHHHHHHHHHHHHHcCCCeEEEECCCCcchHH
Confidence 35 68999998665321 0112335677777544211 1111 1233333333334 789999999885 766
Q ss_pred H-HHHHHH-HCCcc
Q 031788 110 H-ATADLL-GAGFK 121 (153)
Q Consensus 110 ~-~~~~L~-~~G~~ 121 (153)
. ++.+|. ..|++
T Consensus 131 ~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 131 TLVIAYLMMRQKMD 144 (183)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhCCC
Confidence 5 555554 45653
No 85
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=92.50 E-value=0.36 Score=32.45 Aligned_cols=86 Identities=13% Similarity=0.156 Sum_probs=45.7
Q ss_pred ecHHHHHHHHhC-C-CeEEecCChhhhhc--CCCCCcceeCccccccCCCCCCCCh----HHHHHHHhhc--------cC
Q 031788 31 VDVRAAKNLLES-G-YGYLDVRTAEEFKE--GHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSLC--------KE 94 (153)
Q Consensus 31 i~~~~~~~~~~~-~-~~iIDvR~~~e~~~--ghi~ga~~i~ip~~~~~~~~~~~~~----~~~~~~~~~~--------~~ 94 (153)
-+.++..+.+.+ + ..|||++.+. |.. ....|-.+.++|.... ..+.. .|.+.+.+.. ++
T Consensus 34 ~t~~~~~~~l~~~gi~~Iv~l~~~~-~~~~~~~~~~i~~~~~p~~d~----~~p~~~~~~~~~~~i~~~~~~~~~~~~~~ 108 (167)
T 3s4o_A 34 SNLPTYIKELQHRGVRHLVRVCGPT-YDATLVKSRGIDVHSWPFDDG----APPTRAVLDSWLKLLDTELARQQEDPSVP 108 (167)
T ss_dssp GGHHHHHHHHHTTTEEEEEECSCCC-SCTHHHHTTTCEEEECCCCTT----CCCCHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred hhHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHCCCeEEEeccCCC----CCCCHHHHHHHHHHHHHHHHHHhhccccC
Confidence 455555566654 4 5789999862 211 1112334566776422 11222 2333333321 34
Q ss_pred CCeEEEEeCCCc-cHH-HHHHHHHHC-Ccc
Q 031788 95 EDRLVVGCQSGA-RSL-HATADLLGA-GFK 121 (153)
Q Consensus 95 ~~~ivi~c~~g~-~a~-~~~~~L~~~-G~~ 121 (153)
+.+|+++|..|. |+. .++.+|... |.+
T Consensus 109 ~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 109 PPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 889999999774 654 445566555 654
No 86
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=92.00 E-value=0.37 Score=31.88 Aligned_cols=78 Identities=12% Similarity=0.147 Sum_probs=41.7
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCCc-cHH-HHHHHH
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSL-HATADL 115 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g~-~a~-~~~~~L 115 (153)
+.+ ..||+++...+ ...-.+-.+.++|..+... .++.. ++..+.+.+....+.+|+|+|..|. ||. .++.+|
T Consensus 27 ~~gI~~Vl~l~~~~~--~~~~~~~~~~~ipi~D~~~-~~~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayL 103 (144)
T 3s4e_A 27 KNKVTHILNVAYGVE--NAFLSDFTYKSISILDLPE-TNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFL 103 (144)
T ss_dssp HTTCCEEEECSSSCC--CCCTTTSEEEECCCCCCTT-SCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred HcCCCEEEEccCCCC--CCCCCCCEEEEEeccCCCC-CchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 345 67999987432 2222344567777754321 11111 1222333333457889999999875 654 444555
Q ss_pred H-HCCcc
Q 031788 116 L-GAGFK 121 (153)
Q Consensus 116 ~-~~G~~ 121 (153)
. ..|++
T Consensus 104 m~~~~~~ 110 (144)
T 3s4e_A 104 MNSEQTS 110 (144)
T ss_dssp HHHHCCC
T ss_pred HHHcCCC
Confidence 4 35653
No 87
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=91.42 E-value=0.25 Score=33.15 Aligned_cols=81 Identities=21% Similarity=0.217 Sum_probs=41.4
Q ss_pred HHHHHHHHhCC-CeEEecCChhhhhc-----------CCCCCcceeCccccccCCCCCCCC-hHH---HHHHHhhccCCC
Q 031788 33 VRAAKNLLESG-YGYLDVRTAEEFKE-----------GHVDAAKIFNIPYMFNTPEGRVKN-PDF---LKKVRSLCKEED 96 (153)
Q Consensus 33 ~~~~~~~~~~~-~~iIDvR~~~e~~~-----------ghi~ga~~i~ip~~~~~~~~~~~~-~~~---~~~~~~~~~~~~ 96 (153)
.+++..+-+.+ ..|||+|++.|... ..-.|..++++|.... ..+. +.+ .+.+.+.. ..
T Consensus 18 ~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~----~~p~~~~~~~~~~~i~~~~--~~ 91 (161)
T 2i6j_A 18 ENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDG----GVPSDSQFLTIMKWLLSEK--EG 91 (161)
T ss_dssp HHHHHHHHHHTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTT----CCCCHHHHHHHHHHHHHCC--TT
T ss_pred HHHHHHHHHCCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCC----CCCChHHHHHHHHHHHHhC--CC
Confidence 34554444445 68999999866532 1123445677775322 1122 223 33333322 22
Q ss_pred eEEEEeCCC-ccHHH-HHHHHHHC-Cc
Q 031788 97 RLVVGCQSG-ARSLH-ATADLLGA-GF 120 (153)
Q Consensus 97 ~ivi~c~~g-~~a~~-~~~~L~~~-G~ 120 (153)
. +++|..| .|+.. ++-.|... |.
T Consensus 92 ~-lVHC~aG~~Rtg~~~~~~l~~~~~~ 117 (161)
T 2i6j_A 92 N-LVHCVGGIGRTGTILASYLILTEGL 117 (161)
T ss_dssp E-EEECSSSSHHHHHHHHHHHHHHHCC
T ss_pred C-EEECCCCCCHHHHHHHHHHHHHcCC
Confidence 3 9999988 46543 34444433 54
No 88
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=91.17 E-value=0.53 Score=33.75 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=39.6
Q ss_pred CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHH-HHHHH-HHC
Q 031788 44 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLH-ATADL-LGA 118 (153)
Q Consensus 44 ~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~-~~~~L-~~~ 118 (153)
..|||+|.+.. ...-.|-.++++|..+... .++.. ++..+.+.+....+.+|+++|..| .|+.. ++.+| ...
T Consensus 33 t~VInl~~e~~--~~~~~gi~y~~ipi~D~~~-~~l~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~~~ 109 (211)
T 2g6z_A 33 TALLNVSRRTS--EACMTHLHYKWIPVEDSHT-ADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTK 109 (211)
T ss_dssp CEEEECSSCCC--CTTCTTSEEEECCCCSSTT-SCCGGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCc--cccccCCEEEEeeCCCCCC-CCHHHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHHHHHHHHHHc
Confidence 67899997532 1111344567777753321 11111 122333333345789999999988 57653 34444 345
Q ss_pred Cc
Q 031788 119 GF 120 (153)
Q Consensus 119 G~ 120 (153)
|+
T Consensus 110 g~ 111 (211)
T 2g6z_A 110 QF 111 (211)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 89
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=90.69 E-value=0.18 Score=34.05 Aligned_cols=81 Identities=19% Similarity=0.255 Sum_probs=40.3
Q ss_pred HHHHHhCC-CeEEecCChhh--hhc-CCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccH
Q 031788 36 AKNLLESG-YGYLDVRTAEE--FKE-GHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARS 108 (153)
Q Consensus 36 ~~~~~~~~-~~iIDvR~~~e--~~~-ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a 108 (153)
+..+.+.+ ..|||+|++.. |.. |. -.+.++|..+.... ++.. ++..+.+.+....+.+|+++|..| .|+
T Consensus 24 ~~~L~~~gI~~Vi~l~~~~~~~~~~~~~---i~~~~ipi~D~~~~-~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS 99 (155)
T 2hxp_A 24 LESLAKLGIRYILNVTPNLPNFFEKNGD---FHYKQIPISDHWSQ-NLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRS 99 (155)
T ss_dssp HHHHHHTTEEEEEECSSSCCCTTTTCTT---CEEEECCCCGGGGG-GHHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHH
T ss_pred HHHHHHCCCCEEEEeCCCCcccccCCCC---eEEEEEECccCCCC-CHHHHHHHHHHHHHHHHHcCCcEEEECCCCCchh
Confidence 33333445 57899997421 111 11 34567776432110 0000 011222222245688999999988 576
Q ss_pred HH-HHHHHH-HCCc
Q 031788 109 LH-ATADLL-GAGF 120 (153)
Q Consensus 109 ~~-~~~~L~-~~G~ 120 (153)
.. ++.+|. ..|+
T Consensus 100 ~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 100 VTVTVAYLMQKLHL 113 (155)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCC
Confidence 63 344453 3454
No 90
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=90.50 E-value=0.39 Score=31.96 Aligned_cols=90 Identities=17% Similarity=0.186 Sum_probs=46.5
Q ss_pred ceeecHHHHHHHHh-CC-CeEEecCChhhhhc-CCCCCcceeCccccccCCCCCCCCh----HHHHHHHhh--ccCCCeE
Q 031788 28 VITVDVRAAKNLLE-SG-YGYLDVRTAEEFKE-GHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSL--CKEEDRL 98 (153)
Q Consensus 28 ~~~i~~~~~~~~~~-~~-~~iIDvR~~~e~~~-ghi~ga~~i~ip~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~i 98 (153)
....|.+++.+.+. .+ ..||++++...... -+..+-.+.++|.... ..+.. ++.+.+.+. .+++.+|
T Consensus 24 p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~~~~~~~p~~d~----~~~~~~~~~~~~~~i~~~~~~~~~~~v 99 (159)
T 1rxd_A 24 PTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDG----APPSNQIVDDWLSLVKIKFREEPGCCI 99 (159)
T ss_dssp CCGGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTCEEEECCC--C----CCCCHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred CccccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHHcCCEEEeCCCcCC----CCCCHHHHHHHHHHHHHHHHhCCCCeE
Confidence 34567778666665 45 57889886432110 0112334566664322 11112 233333332 1457899
Q ss_pred EEEeCCC-ccHH-HHHHHHHHCCcc
Q 031788 99 VVGCQSG-ARSL-HATADLLGAGFK 121 (153)
Q Consensus 99 vi~c~~g-~~a~-~~~~~L~~~G~~ 121 (153)
+++|..| .|+. .++..|...|.+
T Consensus 100 lVHC~aG~~Rtg~~~a~~l~~~~~~ 124 (159)
T 1rxd_A 100 AVHCVAGLGRAPVLVALALIEGGMK 124 (159)
T ss_dssp EEECSSSSTTHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCHHHHHHHHHHHHhCCC
Confidence 9999977 4654 445556556653
No 91
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=89.91 E-value=0.24 Score=33.76 Aligned_cols=86 Identities=13% Similarity=0.147 Sum_probs=44.6
Q ss_pred ecHHHHHHHHhCC-CeEEecCChhh-hhcCCC--CCcceeCccccccCCCCCCCCh----HHHHHHHhhc--cCCCeEEE
Q 031788 31 VDVRAAKNLLESG-YGYLDVRTAEE-FKEGHV--DAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSLC--KEEDRLVV 100 (153)
Q Consensus 31 i~~~~~~~~~~~~-~~iIDvR~~~e-~~~ghi--~ga~~i~ip~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~ivi 100 (153)
-+++++.+. +.+ ..|||++.... |....+ .|..++++|.... ..+.. .|.+.+.+.+ +++.+|++
T Consensus 44 ~~~~~ll~~-~~gi~~Vi~l~~~~~~~~~~~~~~~gi~~~~~~~~d~----~~p~~~~~~~~~~~~~~~~~~~~~~~vlV 118 (169)
T 1yn9_A 44 WTAEQIVKQ-NPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQ----TLPPESIVQEFIDTVKEFTEKCPGMLVGV 118 (169)
T ss_dssp CCHHHHHHH-CTTEEEEEECCSCSCSCCTHHHHHTTCEEEECCCCSS----SCCCHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred CCHHHHHhh-CCCcCEEEEcCCCCCCCCHHHHHhcCCEEEEEeCCCC----CCCCHHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345555543 344 68999986532 221111 1334566665322 11211 2333333222 36789999
Q ss_pred EeCCCc-cHH-HHHHHHHH-CCcc
Q 031788 101 GCQSGA-RSL-HATADLLG-AGFK 121 (153)
Q Consensus 101 ~c~~g~-~a~-~~~~~L~~-~G~~ 121 (153)
+|..|. |+. .++.+|.. .|++
T Consensus 119 HC~aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 119 HCTHGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp ECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred ECCCCCChHHHHHHHHHHHHhCCC
Confidence 999774 654 44555654 6753
No 92
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=88.50 E-value=0.98 Score=31.65 Aligned_cols=75 Identities=17% Similarity=0.160 Sum_probs=40.9
Q ss_pred CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHHH-HHHHH-HC
Q 031788 44 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLHA-TADLL-GA 118 (153)
Q Consensus 44 ~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~~-~~~L~-~~ 118 (153)
..|||+|++.+. ....+-.++++|...... ..+.. .++.+.+......+.+|+++|..| .|+..+ +.+|. ..
T Consensus 75 ~~Vi~l~~~~~~--~~~~~~~~~~~p~~d~~~-~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~yL~~~~ 151 (195)
T 2q05_A 75 KYVLNLTMDKYT--LPNSNINIIHIPLVDDTT-TDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKN 151 (195)
T ss_dssp SEEEECSSSCCC--CTTCCCEEEECCCCCSSS-CCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCC--cccCCcEEEEEEcCCCCc-ccHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChHHHHHHHHHHHHh
Confidence 468999986532 222344567777653321 11111 133334433345678999999988 575533 44443 45
Q ss_pred Ccc
Q 031788 119 GFK 121 (153)
Q Consensus 119 G~~ 121 (153)
|.+
T Consensus 152 ~~~ 154 (195)
T 2q05_A 152 KES 154 (195)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 93
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=88.11 E-value=2.4 Score=29.86 Aligned_cols=76 Identities=22% Similarity=0.266 Sum_probs=39.6
Q ss_pred hCC-CeEEecCChhh-------hhcCCCCCcceeCccccccCCCCCCCChHHHH---HHHhhcc-CCCeEEEEeCCC-cc
Q 031788 41 ESG-YGYLDVRTAEE-------FKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK---KVRSLCK-EEDRLVVGCQSG-AR 107 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e-------~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~ivi~c~~g-~~ 107 (153)
+.+ ..|||++.+.+ +..+ .+..+.++|..+. +..++.. .|.+ .+.+.+. .+.+|+|+|..| .|
T Consensus 69 ~~gIt~Vinl~~~~~~~~~~~~~~~~--~~i~y~~ipi~D~-p~~dl~~-~f~~~~~fI~~~l~~~~~~VLVHC~aG~sR 144 (205)
T 2pq5_A 69 QLGITHVVNAAAGKFQVDTGAKFYRG--MSLEYYGIEADDN-PFFDLSV-YFLPVARYIRAALSVPQGRVLVHCAMGVSR 144 (205)
T ss_dssp HHTCCEEEETBCSTTSCCCHHHHTTT--SSCEEEECBCCCC-TTSCGGG-GHHHHHHHHHHHHTSTTCCEEEECSSSSSH
T ss_pred HcCCeEEEEeCCCcccCCcchhhhcc--CCceEEeeecCCC-CcchHHH-HHHHHHHHHHHHHhcCCCeEEEECCCCCcH
Confidence 335 68999997532 1111 1234567776432 2222221 2322 2222233 678999999988 57
Q ss_pred HH-HHHHHH-HHCCc
Q 031788 108 SL-HATADL-LGAGF 120 (153)
Q Consensus 108 a~-~~~~~L-~~~G~ 120 (153)
|. .++.+| ...|.
T Consensus 145 S~tvv~aYLm~~~~~ 159 (205)
T 2pq5_A 145 SATLVLAFLMIYENM 159 (205)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHcCC
Confidence 66 344444 44564
No 94
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=88.10 E-value=0.071 Score=37.11 Aligned_cols=23 Identities=22% Similarity=0.333 Sum_probs=20.7
Q ss_pred eEEecCChhhhhcCCCCCcceeCcccccc
Q 031788 45 GYLDVRTAEEFKEGHVDAAKIFNIPYMFN 73 (153)
Q Consensus 45 ~iIDvR~~~e~~~ghi~ga~~i~ip~~~~ 73 (153)
++||||.+.||. ||| +|||...+
T Consensus 123 ~liDvRe~~E~~----pgA--~~iprg~l 145 (168)
T 1v8c_A 123 AVVRFREVEPLK----VGS--LSIPQLRV 145 (168)
T ss_dssp EEEEEEEEEEEE----ETT--EEEEEEEE
T ss_pred EEEECCChhhcC----CCC--EEcChhHH
Confidence 899999999998 999 99998654
No 95
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=87.98 E-value=2.2 Score=28.77 Aligned_cols=73 Identities=10% Similarity=0.089 Sum_probs=37.1
Q ss_pred hCC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHH-------HHHhhccCCCeEEEEeCCCc-cHH-H
Q 031788 41 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK-------KVRSLCKEEDRLVVGCQSGA-RSL-H 110 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ivi~c~~g~-~a~-~ 110 (153)
+.+ ..||+++.... .....+-.+.++|..+. ...++.+ .+.+....+.+|+|+|..|. ||. .
T Consensus 33 ~~gIt~Vlnl~~~~~--~~~~~~~~~~~ipi~D~------~~~~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~v 104 (161)
T 3emu_A 33 NNNISSILLVGIEVP--SLFKDQCDILRLDIVSE------EGHQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAI 104 (161)
T ss_dssp HTTEEEEEEEC---------CTTSEEEEECCCCS------STTHHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHHH
T ss_pred HCCCCEEEEeCCCCc--cccCCCCEEEEEeCcCC------CCCcHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHH
Confidence 345 57899997432 11122345667777432 1112222 22222356789999999885 654 4
Q ss_pred HHHHHH-HCCcc
Q 031788 111 ATADLL-GAGFK 121 (153)
Q Consensus 111 ~~~~L~-~~G~~ 121 (153)
++.+|. ..|++
T Consensus 105 v~ayLm~~~~~s 116 (161)
T 3emu_A 105 VIAFLMYYQRLS 116 (161)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHhCCC
Confidence 445554 45643
No 96
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=87.75 E-value=0.61 Score=32.59 Aligned_cols=74 Identities=12% Similarity=0.202 Sum_probs=37.6
Q ss_pred CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHH-HHHHHHH-HC
Q 031788 44 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSL-HATADLL-GA 118 (153)
Q Consensus 44 ~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~-~~~~~L~-~~ 118 (153)
..||+++.+.......+++-.++++|..... .+.. ++..+.+.+....+.+|+|+|..| .||. .++.+|. ..
T Consensus 67 t~Vlnv~~e~~~~~~~~~~i~y~~ip~~d~~---~i~~~~~~~~~fI~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~~ 143 (182)
T 2j16_A 67 DVVINVAEEANDLRMQVPAVEYHHYRWEHDS---QIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYH 143 (182)
T ss_dssp SEEEECCSCC--------CCEEEECCCSSGG---GGGGGHHHHHHHHHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHHT
T ss_pred CEEEEecCCCCCchhccCCceEEEEecCCCc---hHHHHHHHHHHHHHHHHhcCCeEEEECCCCCChHHHHHHHHHHHHc
Confidence 4689998754433223445566777764221 1111 122333333345789999999987 4665 4455554 45
Q ss_pred Cc
Q 031788 119 GF 120 (153)
Q Consensus 119 G~ 120 (153)
|.
T Consensus 144 ~~ 145 (182)
T 2j16_A 144 NL 145 (182)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 97
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=86.89 E-value=1.2 Score=30.42 Aligned_cols=75 Identities=16% Similarity=0.122 Sum_probs=39.4
Q ss_pred CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCC--hHHHHHHHhhccCCCeEEEEeCCC-ccHHH-HHHHHH-HC
Q 031788 44 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSG-ARSLH-ATADLL-GA 118 (153)
Q Consensus 44 ~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ivi~c~~g-~~a~~-~~~~L~-~~ 118 (153)
..||+++.+.+... -.+-.+.++|...... ..+.. .+..+.+......+.+|+++|..| .|+.. ++.+|. ..
T Consensus 58 ~~Ii~l~~~~~~~~--~~~~~~~~~p~~d~~~-~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~~~ 134 (176)
T 3cm3_A 58 KYVLNLTMDKYTLP--NSNINIIHIPLVDDTT-TDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKN 134 (176)
T ss_dssp SEEEECSSSCCCCT--TSCCEEEECCCCCSSS-CCCGGGHHHHHHHHHHHHHHTCCEEEECSSSSSHHHHHHHHHHHHHC
T ss_pred CEEEEecCCCCCcC--CCCCEEEEEECCCCCc-ccHHHHHHHHHHHHHHHHHCCCcEEEECCcCCCHHHHHHHHHHHHHh
Confidence 46899997544221 1233556677643321 11111 123333333334578999999987 56553 344443 45
Q ss_pred Ccc
Q 031788 119 GFK 121 (153)
Q Consensus 119 G~~ 121 (153)
|.+
T Consensus 135 ~~~ 137 (176)
T 3cm3_A 135 KES 137 (176)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 98
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=86.65 E-value=3.3 Score=29.53 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=39.9
Q ss_pred hCC-CeEEecCChhh-hhc--C--CCCCcceeCccccccCCCCCCCChHH---HHHHHhhc-cCCCeEEEEeCCC-ccHH
Q 031788 41 ESG-YGYLDVRTAEE-FKE--G--HVDAAKIFNIPYMFNTPEGRVKNPDF---LKKVRSLC-KEEDRLVVGCQSG-ARSL 109 (153)
Q Consensus 41 ~~~-~~iIDvR~~~e-~~~--g--hi~ga~~i~ip~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~ivi~c~~g-~~a~ 109 (153)
+.+ ..|||++.... ... . .-.|-.++++|..... ..++. ..| .+.+.+.+ ..+.+|+|+|..| .|+.
T Consensus 77 ~~gIt~VInl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~~-~~~l~-~~~~~~~~fI~~~l~~~~~~VLVHC~aG~sRS~ 154 (219)
T 2y96_A 77 KAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLP-TFDLS-VFFYPAAAFIDRALSDDHSKILVHCVMGRSRSA 154 (219)
T ss_dssp HTTCCEEEETTBSTTSBCCHHHHTTTSCCEEEECCCCSST-TSCGG-GGHHHHHHHHHHHHTSTTCCEEEECSSSSSHHH
T ss_pred HCCCeEEEECCCCccccccchhhhcccCcEEEEEECCCCC-chhHH-HHHHHHHHHHHHHHHccCCeEEEECCCCCCHHH
Confidence 345 67999996431 000 0 0123345667764331 11211 123 22333333 5688999999988 5765
Q ss_pred H-HHHHH-HHCCc
Q 031788 110 H-ATADL-LGAGF 120 (153)
Q Consensus 110 ~-~~~~L-~~~G~ 120 (153)
. ++.+| ...|+
T Consensus 155 tvv~aYLm~~~~~ 167 (219)
T 2y96_A 155 TLVLAYLMIHKDM 167 (219)
T ss_dssp HHHHHHHHHHSCC
T ss_pred HHHHHHHHHHcCC
Confidence 4 44444 44564
No 99
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=86.20 E-value=5.6 Score=30.56 Aligned_cols=81 Identities=7% Similarity=0.118 Sum_probs=43.5
Q ss_pred HHHHHHHHh-CC-CeEEecCChh----hhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh-ccCCCeEEEEeCCC
Q 031788 33 VRAAKNLLE-SG-YGYLDVRTAE----EFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSG 105 (153)
Q Consensus 33 ~~~~~~~~~-~~-~~iIDvR~~~----e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ivi~c~~g 105 (153)
+++..+.++ .+ ..|||+|.+. .+.. .|..++++|.... ..+..+....+.+. .+++.+|+|+|..|
T Consensus 207 ~~~~~~~L~~~GI~~VInL~~~~y~~~~~~~---~gi~~~~ipi~D~----~~P~~~~~~~fi~~~~~~~~~VLVHC~aG 279 (348)
T 1ohe_A 207 PETYIQYFKNHNVTTIIRLNKRMYDAKRFTD---AGFDHHDLFFADG----STPTDAIVKEFLDICENAEGAIAVHSKAG 279 (348)
T ss_dssp THHHHHHHHHTTEEEEEECSCCSSCTHHHHT---TTCEEEECCCCTT----CCCCHHHHHHHHHHHHSCSSEEEEECSSS
T ss_pred HHHHHHHHHHcCCCEEEECCCCcCChhhhhc---CCcEEEEecCCCC----CCCCHHHHHHHHHHHHhCCCcEEEECCCC
Confidence 444445554 35 5799999642 2222 2335566776421 12222333322222 45788999999988
Q ss_pred -ccHH-HHHHHHHH-CCc
Q 031788 106 -ARSL-HATADLLG-AGF 120 (153)
Q Consensus 106 -~~a~-~~~~~L~~-~G~ 120 (153)
.|+. .++.+|.. .|+
T Consensus 280 ~gRTGtvvaayLm~~~g~ 297 (348)
T 1ohe_A 280 LGRTGTLIACYIMKHYRM 297 (348)
T ss_dssp SHHHHHHHHHHHHHHHCC
T ss_pred CChHHHHHHHHHHHHcCC
Confidence 4654 44555554 565
No 100
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=86.17 E-value=2.5 Score=31.72 Aligned_cols=83 Identities=10% Similarity=0.058 Sum_probs=46.1
Q ss_pred cHHHHHHHHhCC-CeEEecCChhhhhcC------------CCCCcceeCccccccCCCCCCCChHH-------HHHHHhh
Q 031788 32 DVRAAKNLLESG-YGYLDVRTAEEFKEG------------HVDAAKIFNIPYMFNTPEGRVKNPDF-------LKKVRSL 91 (153)
Q Consensus 32 ~~~~~~~~~~~~-~~iIDvR~~~e~~~g------------hi~ga~~i~ip~~~~~~~~~~~~~~~-------~~~~~~~ 91 (153)
++.++..+-+.+ ..||+++...+.... ...|-.++++|..+. ..+++ .+.+.+.
T Consensus 28 ~~~d~~~L~~~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~------~~~~l~~~~~~~~~~I~~~ 101 (294)
T 3nme_A 28 TPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDF------DAFDLRMRLPAVVGTLYKA 101 (294)
T ss_dssp STHHHHHHHHTTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTT------CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCC------CCCCHHHHHHHHHHHHHHH
Confidence 445665554556 678999987764321 112346677887422 11122 2222222
Q ss_pred c-cCCCeEEEEeCCCc-cHH-HHHHHHHH-CCc
Q 031788 92 C-KEEDRLVVGCQSGA-RSL-HATADLLG-AGF 120 (153)
Q Consensus 92 ~-~~~~~ivi~c~~g~-~a~-~~~~~L~~-~G~ 120 (153)
+ ..+.+|+|+|..|. ||. .++.+|.. .|.
T Consensus 102 l~~~g~~VLVHC~aG~sRS~tvv~ayLm~~~g~ 134 (294)
T 3nme_A 102 VKRNGGVTYVHSTAGMGRAPAVALTYMFWVQGY 134 (294)
T ss_dssp HHHHCSEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred HHhCCCEEEEECCCCCchhHHHHHHHHHHHhCC
Confidence 3 34789999999885 654 45566654 354
No 101
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=84.87 E-value=1.6 Score=30.08 Aligned_cols=38 Identities=11% Similarity=0.117 Sum_probs=29.4
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
.++.+++|+|++-..+..++..|...|+. +..+.|++.
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~ 81 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 81 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTCC-EEEEC----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCC
Confidence 46788999999988889999999999986 888888864
No 102
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=82.31 E-value=2.1 Score=28.66 Aligned_cols=36 Identities=19% Similarity=0.391 Sum_probs=31.4
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
++.+++++|++...+..++..|...|+. +..+.|++
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~ 69 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGM 69 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 5678999999988899999999999987 78888885
No 103
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=81.62 E-value=8.3 Score=27.93 Aligned_cols=85 Identities=15% Similarity=0.231 Sum_probs=45.2
Q ss_pred eecHHHHHHHHhC---C-CeEEecCChh------hhhcCCCCCcceeCccccccCCCCCCCChH----HHHHHHhhcc--
Q 031788 30 TVDVRAAKNLLES---G-YGYLDVRTAE------EFKEGHVDAAKIFNIPYMFNTPEGRVKNPD----FLKKVRSLCK-- 93 (153)
Q Consensus 30 ~i~~~~~~~~~~~---~-~~iIDvR~~~------e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~----~~~~~~~~~~-- 93 (153)
+.++.++.+.++. + ..|||++.+. .+...+| .++++|.... +..+..+ |.+.+.+.+.
T Consensus 66 r~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi---~y~~~p~~D~---~~~P~~~~l~~~~~~i~~~~~~~ 139 (241)
T 2c46_A 66 RFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGI---KYIKLQCKGH---GECPTTENTETFIRLCERFNERN 139 (241)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTC---EEEECCCCCT---TCCCCHHHHHHHHHHHTTC----
T ss_pred cCCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCC---EEEEEecCCC---CCCCChHHHHHHHHHHHHHHHhC
Confidence 4567877776642 3 6899999653 2222222 4566776321 1122222 3333333222
Q ss_pred CCCeEEEEeCCCc-cHH-HHHHHHHH-CCc
Q 031788 94 EEDRLVVGCQSGA-RSL-HATADLLG-AGF 120 (153)
Q Consensus 94 ~~~~ivi~c~~g~-~a~-~~~~~L~~-~G~ 120 (153)
++.+|+|+|..|. |+. .++.+|.. .|+
T Consensus 140 ~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~ 169 (241)
T 2c46_A 140 PPELIGVHCTHGFNRTGFLICAFLVEKMDW 169 (241)
T ss_dssp -CEEEEEECSSSSHHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 3578999999774 654 44555554 564
No 104
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=80.56 E-value=2.6 Score=28.61 Aligned_cols=36 Identities=19% Similarity=0.207 Sum_probs=31.4
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
+.++++++|++-..+..++..|...|+. +..+.|++
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~ 65 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGM 65 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCCC-EEEEECCC
Confidence 5678999999988899999999999987 77888885
No 105
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=79.92 E-value=2.4 Score=28.72 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=31.4
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
+..+++++|++-..+..++..|...|+. +..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGHQ-VSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTCC-EEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 5678999999988889999999999986 88888885
No 106
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=79.35 E-value=3.3 Score=27.63 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=31.2
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
++.+++++|++...+..++..|...|+. +..+.|++
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 64 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDL 64 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCC-EEEEECCC
Confidence 5678999999988889999999999986 78888885
No 107
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=75.41 E-value=3.4 Score=30.47 Aligned_cols=29 Identities=10% Similarity=0.181 Sum_probs=23.5
Q ss_pred CeEEEEeCCCcc---HHHHHHHHHHCCccceee
Q 031788 96 DRLVVGCQSGAR---SLHATADLLGAGFKHVSN 125 (153)
Q Consensus 96 ~~ivi~c~~g~~---a~~~~~~L~~~G~~~v~~ 125 (153)
++|+++|+.|.. +.-++++|...||+ |.+
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v 117 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VIL 117 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEE
Confidence 589999997754 67889999999998 443
No 108
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=74.51 E-value=4.4 Score=28.00 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=30.5
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.+.+++++|++-..+..++..|...|+. +..+.|++
T Consensus 53 ~~~~~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~ 88 (191)
T 2p6n_A 53 TPPPVLIFAEKKADVDAIHEYLLLKGVE-AVAIHGGK 88 (191)
T ss_dssp SCSCEEEECSCHHHHHHHHHHHHHHTCC-EEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 3567999999988889999999999987 77788875
No 109
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=74.30 E-value=16 Score=24.21 Aligned_cols=88 Identities=16% Similarity=0.151 Sum_probs=45.3
Q ss_pred eecHHHHHHHHhCC-CeEEecCChhhhhc-----CCC--CCcceeCccccccCCCCCCCChHHHHHHHhhc-cCCCeEEE
Q 031788 30 TVDVRAAKNLLESG-YGYLDVRTAEEFKE-----GHV--DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC-KEEDRLVV 100 (153)
Q Consensus 30 ~i~~~~~~~~~~~~-~~iIDvR~~~e~~~-----ghi--~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ivi 100 (153)
.++.+.+..+.+.+ .++|+.|+..+-.. ..+ .|...+.+|.....+ ...+..+.+.... .-++.|++
T Consensus 27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~----~~~~v~~~~~~i~~~~G~dVLV 102 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNP----KVEDVEAFFAAMDQHKGKDVLV 102 (157)
T ss_dssp CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSC----CHHHHHHHHHHHHHTTTSCEEE
T ss_pred CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCC----CHHHHHHHHHHHHhcCCCCEEE
Confidence 46677777766667 57788887554221 001 233346666631111 0112222222221 13449999
Q ss_pred EeCCCccHH-HHHHHHHHCCcc
Q 031788 101 GCQSGARSL-HATADLLGAGFK 121 (153)
Q Consensus 101 ~c~~g~~a~-~~~~~L~~~G~~ 121 (153)
+|.++.+.. ..+.++...|.+
T Consensus 103 nnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 103 HCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp ECSBSHHHHHHHHHHHHHTTCC
T ss_pred ECCCCCCHHHHHHHHHHHcCCC
Confidence 999887644 334445556754
No 110
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=73.99 E-value=3.9 Score=30.34 Aligned_cols=45 Identities=13% Similarity=0.150 Sum_probs=31.4
Q ss_pred CeEEEEeCCCcc---HHHHHHHHHHCCccceeec-cc---------cHHHHHhCCCcee
Q 031788 96 DRLVVGCQSGAR---SLHATADLLGAGFKHVSNF-GG---------GHMAWVQNGLKVK 141 (153)
Q Consensus 96 ~~ivi~c~~g~~---a~~~~~~L~~~G~~~v~~l-~g---------G~~~w~~~g~~~~ 141 (153)
++|+++|..|.. +.-+++.|...||+ |.++ .+ .+..|.+.|.++.
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~~~~~~~~~~~~~~~~~~~~~g~~~~ 137 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIYYPKRPNKPLFTGLVTQCQKMDIPFL 137 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEECCSCCSSHHHHHHHHHHHHTTCCBC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEEEeCCCCCHHHHHHHHHHHHcCCcEE
Confidence 589999997754 67889999999997 5433 32 1244666676653
No 111
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=73.10 E-value=4 Score=30.85 Aligned_cols=29 Identities=10% Similarity=0.181 Sum_probs=23.5
Q ss_pred CeEEEEeCCCcc---HHHHHHHHHHCCccceee
Q 031788 96 DRLVVGCQSGAR---SLHATADLLGAGFKHVSN 125 (153)
Q Consensus 96 ~~ivi~c~~g~~---a~~~~~~L~~~G~~~v~~ 125 (153)
.+|+++|+.|.. +..+|++|...||+ |.+
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V 164 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VIL 164 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEE
Confidence 589999997754 67889999999997 443
No 112
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=72.89 E-value=9.8 Score=27.73 Aligned_cols=45 Identities=16% Similarity=0.054 Sum_probs=32.1
Q ss_pred CeEEEEeCCCcc---HHHHHHHHHHCCccceeec-ccc----------HHHHHhCCCcee
Q 031788 96 DRLVVGCQSGAR---SLHATADLLGAGFKHVSNF-GGG----------HMAWVQNGLKVK 141 (153)
Q Consensus 96 ~~ivi~c~~g~~---a~~~~~~L~~~G~~~v~~l-~gG----------~~~w~~~g~~~~ 141 (153)
++|+++|..|.. +..++++|...||+ |.++ .+. +..|...|.++.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 689999997754 67889999999997 5433 322 345666776664
No 113
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=71.03 E-value=21 Score=26.36 Aligned_cols=89 Identities=17% Similarity=0.148 Sum_probs=51.8
Q ss_pred eecHHHHHHHHh---C-C-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCC-ChHHHHHHHhhccCCCeEEEEeC
Q 031788 30 TVDVRAAKNLLE---S-G-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKEEDRLVVGCQ 103 (153)
Q Consensus 30 ~i~~~~~~~~~~---~-~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivi~c~ 103 (153)
.++.+++.++.+ + + -++|.|.++.|.+...-.|+..+-|-.-.+ ..+. +-+-...+...++++ +++++.
T Consensus 136 ~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL---~tf~vdl~~t~~L~~~ip~~--~~~VsE 210 (258)
T 4a29_A 136 ILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDF---ETGEINKENQRKLISMIPSN--VVKVAK 210 (258)
T ss_dssp GSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCT---TTCCBCHHHHHHHHTTSCTT--SEEEEE
T ss_pred hcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCc---cccccCHHHHHHHHhhCCCC--CEEEEc
Confidence 345566666554 2 3 478999999998753333332222111000 1111 113334455545544 466788
Q ss_pred CCccHHHHHHHHHHCCccce
Q 031788 104 SGARSLHATADLLGAGFKHV 123 (153)
Q Consensus 104 ~g~~a~~~~~~L~~~G~~~v 123 (153)
+|..+..-+..+...|++.+
T Consensus 211 SGI~t~~dv~~l~~~G~~a~ 230 (258)
T 4a29_A 211 LGISERNEIEELRKLGVNAF 230 (258)
T ss_dssp ESSCCHHHHHHHHHTTCCEE
T ss_pred CCCCCHHHHHHHHHCCCCEE
Confidence 99999988999999999854
No 114
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=70.78 E-value=4.6 Score=28.33 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=31.7
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.++.+++++|++-..+..++..|...|+. +..+.|++
T Consensus 29 ~~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~lhg~~ 65 (212)
T 3eaq_A 29 ASPDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDL 65 (212)
T ss_dssp HCCSCEEEECSSHHHHHHHHHHHHHHTCC-EEEECSSS
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHcCCC-EEEEECCC
Confidence 46789999999888888999999999987 77888885
No 115
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=70.05 E-value=8.8 Score=26.30 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=34.4
Q ss_pred HHHhhccCCCeEEEEeCCCc--cHHHHHHHHHH---CCccceeeccccHHH
Q 031788 87 KVRSLCKEEDRLVVGCQSGA--RSLHATADLLG---AGFKHVSNFGGGHMA 132 (153)
Q Consensus 87 ~~~~~~~~~~~ivi~c~~g~--~a~~~~~~L~~---~G~~~v~~l~gG~~~ 132 (153)
.+.+.++++..+|+.|..|. .|..++..|.. .|..++.++.||-.+
T Consensus 66 ~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~G 116 (163)
T 4fak_A 66 RILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNG 116 (163)
T ss_dssp HHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTB
T ss_pred HHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCc
Confidence 33444677888888888775 57888888875 688889999998644
No 116
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=70.05 E-value=5.4 Score=32.82 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=32.4
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
++.+++|||++-..+..++..|...|+. +..+.||+
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~~-~~~~h~~l 301 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGIH-AGAYHANL 301 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCCC-EEEecCCC
Confidence 6788999999988899999999999986 88899986
No 117
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=68.13 E-value=6.7 Score=31.64 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=32.6
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
++++++|||++-..+...+..|...|+. +..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~~-~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGIS-AAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 6788999999988899999999999986 888899863
No 118
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=67.04 E-value=6.6 Score=32.76 Aligned_cols=47 Identities=19% Similarity=0.243 Sum_probs=36.5
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.+...+......+.+++++|++..++...+..|.+.|+. +..+.|++
T Consensus 433 ~Ll~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~-~~~lh~~~ 479 (661)
T 2d7d_A 433 DLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIK-VNYLHSEI 479 (661)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred HHHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHhcCCC-eEEEeCCC
Confidence 344444444457789999999988999999999999986 77788874
No 119
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=66.51 E-value=6 Score=33.05 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=36.6
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.+...+......+.+++|+|++..++..++..|.+.|+. +..+.|++
T Consensus 427 ~Ll~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~-~~~lh~~~ 473 (664)
T 1c4o_A 427 DLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIR-ARYLHHEL 473 (664)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred HHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCC-ceeecCCC
Confidence 344444443457889999999988999999999999986 77788875
No 120
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=65.85 E-value=12 Score=28.73 Aligned_cols=85 Identities=11% Similarity=0.239 Sum_probs=47.7
Q ss_pred ecHHHHHHHHh----CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCCh----HHHHHHHhh--ccCCCeEEE
Q 031788 31 VDVRAAKNLLE----SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSL--CKEEDRLVV 100 (153)
Q Consensus 31 i~~~~~~~~~~----~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~ivi 100 (153)
-..+++...++ +.+.|++.+++..|....+.+. ..++|+... ..+.. ++.+.+... .+++..+++
T Consensus 50 n~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~-v~~~p~pD~----~~P~~~~l~~~~~~v~~~l~~~~~~~v~v 124 (339)
T 3v0d_A 50 NPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNH-VYRVMIDDH----NVPTLVDLLKFIDDAKVWMTSDPDHVIAI 124 (339)
T ss_dssp EEHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTC-EEEEEECTT----SCCCHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred CCHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCe-EEEeccCCC----CCCCHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 45667777765 2378999987766665444332 245565322 22222 223333322 245678999
Q ss_pred EeCCCc-cHH-HHHHHHHHCCc
Q 031788 101 GCQSGA-RSL-HATADLLGAGF 120 (153)
Q Consensus 101 ~c~~g~-~a~-~~~~~L~~~G~ 120 (153)
+|..|. |+. .++.+|...|.
T Consensus 125 HC~~G~gRtg~~ia~~Li~~~~ 146 (339)
T 3v0d_A 125 HSKGGKGRTGTLVSSWLLEDGK 146 (339)
T ss_dssp ECSSSSHHHHHHHHHHHHHTTS
T ss_pred EeCCCCcchHHHHHHHHHHhcC
Confidence 999664 543 45556666553
No 121
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=65.84 E-value=10 Score=24.74 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=30.1
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWV 134 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~ 134 (153)
+++-+|.++.++..........|...||..|..-..|..++.
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 456678888766555566777888899987776677777654
No 122
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=65.17 E-value=9.5 Score=28.99 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=32.9
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
..++.+++++|++-..+..++..|.+.|+. +..+.|++.
T Consensus 273 ~~~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (417)
T 2i4i_A 273 TGKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 311 (417)
T ss_dssp CCTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred cCCCCeEEEEECCHHHHHHHHHHHHHCCCC-eeEecCCCC
Confidence 356788999999888889999999999986 888888753
No 123
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=63.07 E-value=25 Score=22.07 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=49.4
Q ss_pred cceeecHHHHHHHHhCCCeEE-ecCChhhhhc-CCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeC-
Q 031788 27 EVITVDVRAAKNLLESGYGYL-DVRTAEEFKE-GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ- 103 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~~~~~iI-DvR~~~e~~~-ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~- 103 (153)
....+|..-...+-+.+.++. |.+...++.. -.+++...+.++.. ...+..+.+.+....++.+++.+.
T Consensus 17 d~~~lT~~a~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~i~~~~~~G~~V~~l~d~ 88 (117)
T 3hh1_A 17 NLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYHSF--------NEERAVRQVIELLEEGSDVALVTDA 88 (117)
T ss_dssp CGGGSCHHHHHHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEECCST--------THHHHHHHHHHHHHTTCCEEEEEET
T ss_pred CHHHhhHHHHHHHHhCCEEEEecCchHHHHHHHhCCCCCEEeccCCc--------cHHHHHHHHHHHHHCCCeEEEEecC
Confidence 455677777655545566665 4444334332 23444422322211 111333444444456888888883
Q ss_pred CC----ccHHHHHHHHHHCCccceeeccc
Q 031788 104 SG----ARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 104 ~g----~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
+. .......+.+.+.|++ +.++.|
T Consensus 89 GdP~i~~~~~~l~~~~~~~gi~-v~viPG 116 (117)
T 3hh1_A 89 GTPAISDPGYTMASAAHAAGLP-VVPVPG 116 (117)
T ss_dssp TSCGGGSTTHHHHHHHHHTTCC-EEEEC-
T ss_pred CcCeEeccHHHHHHHHHHCCCc-EEEeCC
Confidence 32 1346667778888987 777665
No 124
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=62.61 E-value=20 Score=29.02 Aligned_cols=47 Identities=28% Similarity=0.318 Sum_probs=34.0
Q ss_pred CCCeEEEEeCCCcc---HHHHHHHHHHCCcccee-ecccc---------HHHHHhCCCcee
Q 031788 94 EEDRLVVGCQSGAR---SLHATADLLGAGFKHVS-NFGGG---------HMAWVQNGLKVK 141 (153)
Q Consensus 94 ~~~~ivi~c~~g~~---a~~~~~~L~~~G~~~v~-~l~gG---------~~~w~~~g~~~~ 141 (153)
+.++|+++|..|.. +..++++|...||+ |. ++.+. +..|++.|.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 46889999997764 56889999999997 43 22221 356777787775
No 125
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=61.68 E-value=15 Score=25.22 Aligned_cols=47 Identities=15% Similarity=0.167 Sum_probs=32.8
Q ss_pred HHHHhhccCCCeEEEEeCCCc--cHHHHHHHHHH---CCccceeeccccHHH
Q 031788 86 KKVRSLCKEEDRLVVGCQSGA--RSLHATADLLG---AGFKHVSNFGGGHMA 132 (153)
Q Consensus 86 ~~~~~~~~~~~~ivi~c~~g~--~a~~~~~~L~~---~G~~~v~~l~gG~~~ 132 (153)
+.+.+.++++.-+|+.|..|. .|..++..|.. .|..++.++.||-.+
T Consensus 61 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~G 112 (167)
T 1to0_A 61 DRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLG 112 (167)
T ss_dssp HHHHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSSC
T ss_pred HHHHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCCC
Confidence 344443555555777777775 58888888876 687889999998644
No 126
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=60.69 E-value=15 Score=26.50 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=37.2
Q ss_pred ccCCCeEEEEeC---CCccHHHHHHHHHHCCccceee---c----cccHHHHHhCCCceec
Q 031788 92 CKEEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN---F----GGGHMAWVQNGLKVKA 142 (153)
Q Consensus 92 ~~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~---l----~gG~~~w~~~g~~~~~ 142 (153)
+.++++|+++.+ +|.....+++.|++.|...+.+ + .+|.+...+.|.|+..
T Consensus 134 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~s 194 (234)
T 3m3h_A 134 AEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYS 194 (234)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred cCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEE
Confidence 357899999976 7888889999999999765431 2 2345666677887754
No 127
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=60.66 E-value=14 Score=27.33 Aligned_cols=38 Identities=21% Similarity=0.216 Sum_probs=32.1
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
...+.+++++|++-..+..+++.|.+.|+. +..+.|++
T Consensus 235 ~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 272 (367)
T 1hv8_A 235 KNKEFYGLVFCKTKRDTKELASMLRDIGFK-AGAIHGDL 272 (367)
T ss_dssp CSTTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred hcCCCcEEEEECCHHHHHHHHHHHHhcCCC-eEEeeCCC
Confidence 456778999999988899999999999986 77888875
No 128
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=60.45 E-value=46 Score=24.18 Aligned_cols=107 Identities=7% Similarity=-0.049 Sum_probs=59.2
Q ss_pred CcceeecHHHHHHHHhCCCeEE-ecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 26 AEVITVDVRAAKNLLESGYGYL-DVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~~~~iI-DvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
.....+|..-...+-+.+.++. |.+-..+.....-+++ .-++.. ....++..+.+.+....++.|++.+.+
T Consensus 14 G~~~lLT~~A~~~L~~AdvV~~~~~~~~~~ll~~~~~~~--~~~~~~------~~~~~~~~~~i~~~~~~G~~Va~L~~G 85 (264)
T 3ndc_A 14 GAADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGA--KIVNTA------PMSLDAIIDTIAEAHAAGQDVARLHSG 85 (264)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEECSTTSCGGGGGGSCTTC--EEEECT------TSCHHHHHHHHHHHHHHTCCEEEEESB
T ss_pred CChHHHHHHHHHHHHcCCEEEEECCCCCHHHHhhcCCCC--EEEecC------CCCHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3456678777655555666666 7665444332222344 222221 112224445554444467888888753
Q ss_pred C----ccHHHHHHHHHHCCccceeecccc--HH-HHHhCCCcee
Q 031788 105 G----ARSLHATADLLGAGFKHVSNFGGG--HM-AWVQNGLKVK 141 (153)
Q Consensus 105 g----~~a~~~~~~L~~~G~~~v~~l~gG--~~-~w~~~g~~~~ 141 (153)
. .......+.|.+.|++ +.++.|= +. +....|.|+.
T Consensus 86 DP~iyg~~~~l~~~l~~~gi~-veviPGiSs~~aaaA~lG~plt 128 (264)
T 3ndc_A 86 DLSIWSAMGEQLRRLRALNIP-YDVTPGVPSFAAAAATLGAELT 128 (264)
T ss_dssp CTTSSCSHHHHHHHHHHTTCC-EEEECCCCHHHHHHHHHTCCSC
T ss_pred CCccccHHHHHHHHHHhCCCC-EEEeCCHHHHHHHHHHhCCCcc
Confidence 2 2456778888888987 7788763 22 2334577763
No 129
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=58.56 E-value=51 Score=24.10 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=61.4
Q ss_pred CcceeecHHHHHHHHhCCCeEEecCChhhhhcCCCC-CcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 26 AEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVD-AAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~-ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
.....+|..-+..+-+.+.++.|.+...+... +++ ++ .-++.............+..+.+.+....++.|++.+.+
T Consensus 25 Gd~~lLTl~A~~~L~~ADvV~~d~~~~~~ll~-~~~~~~--~~~~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~G 101 (280)
T 1s4d_A 25 GDPGLLTLHAANALRQADVIVHDALVNEDCLK-LARPGA--VLEFAGKRGGKPSPKQRDISLRLVELARAGNRVLRLKGG 101 (280)
T ss_dssp SCTTSSBHHHHHHHHHCSEEEECSCSCTTGGG-GSSTTC--CEEECSCCC--CCCCHHHHHHHHHHHHHTTCCEEEEESB
T ss_pred CCHHHHHHHHHHHHHhCCEEEEcCCCCHHHHH-hccCCC--EEEeccccccccccCHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 34556787766555566788888876554433 332 22 112211000001111224444454444567788888763
Q ss_pred C----ccHHHHHHHHHHCCccceeecccc---HHHHHhCCCcee
Q 031788 105 G----ARSLHATADLLGAGFKHVSNFGGG---HMAWVQNGLKVK 141 (153)
Q Consensus 105 g----~~a~~~~~~L~~~G~~~v~~l~gG---~~~w~~~g~~~~ 141 (153)
. .+.....+.|.+.|++ +.++.|= ..+....|.|+.
T Consensus 102 DP~i~g~g~~l~~~l~~~gi~-veviPGiSs~~aa~a~~Gipl~ 144 (280)
T 1s4d_A 102 DPFVFGRGGEEALTLVEHQVP-FRIVPGITAGIGGLAYAGIPVT 144 (280)
T ss_dssp CTTSSSSHHHHHHHHHTTTCC-EEEECCCCTTTHHHHHTTCCSC
T ss_pred CCccccCHHHHHHHHHHCCCC-EEEEcCccHHHHHHHHcCCCcc
Confidence 3 2456777888888976 7777762 234555677764
No 130
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=58.18 E-value=15 Score=27.59 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=31.6
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.+.++++++|++-..+..+++.|.+.|+. +..+.|++
T Consensus 248 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 284 (391)
T 1xti_A 248 LEFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGM 284 (391)
T ss_dssp SCCSEEEEECSCHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred cCCCcEEEEeCcHHHHHHHHHHHHhCCCc-EEEEeCCC
Confidence 36788999999988889999999999987 77788875
No 131
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=62.72 E-value=2.1 Score=28.87 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=30.7
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
++.+++++|++-..+..++..|...|+. +..+.|++.
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~ 65 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGIN-NCYLEGEMV 65 (170)
Confidence 4578999999888888999999998876 777888764
No 132
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=58.01 E-value=9.3 Score=24.18 Aligned_cols=29 Identities=14% Similarity=0.204 Sum_probs=21.0
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHH----HCCcc
Q 031788 93 KEEDRLVVGCQSGARSLHATADLL----GAGFK 121 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~----~~G~~ 121 (153)
.+..+|++.|..|..+...+..++ +.|++
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~ 36 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVR 36 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCc
Confidence 456679999999988776776654 45765
No 133
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=57.24 E-value=10 Score=28.32 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=31.1
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.+.+++++|++-..+..++..|...|+. +..+.|++
T Consensus 27 ~~~~~LVF~~t~~~~~~l~~~L~~~g~~-~~~lhg~l 62 (300)
T 3i32_A 27 SPDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDM 62 (300)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHTTTCC-EEEECSCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 5788999999888888999999999987 77888884
No 134
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=56.74 E-value=12 Score=24.61 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=25.9
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++|+++++ +|.....+++.|++.|-..|.
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~ 115 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIK 115 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEE
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCCCEEE
Confidence 6788999977 777788899999999987764
No 135
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=56.46 E-value=12 Score=24.22 Aligned_cols=45 Identities=9% Similarity=0.068 Sum_probs=29.1
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeeccccHH---HHHhCCCceecCC
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFGGGHM---AWVQNGLKVKARE 144 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~---~w~~~g~~~~~~~ 144 (153)
|++|+.|..+..+++.|.+.|++ |.+++-.-. ...+.|.++..++
T Consensus 10 viIiG~G~~G~~la~~L~~~g~~-v~vid~~~~~~~~~~~~g~~~i~gd 57 (140)
T 3fwz_A 10 ALLVGYGRVGSLLGEKLLASDIP-LVVIETSRTRVDELRERGVRAVLGN 57 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTTCEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHcCCCEEECC
Confidence 55667777788888888888876 666655432 3344566555443
No 136
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=56.23 E-value=27 Score=20.96 Aligned_cols=45 Identities=13% Similarity=0.296 Sum_probs=32.0
Q ss_pred HHHHHHHhh--ccCCCeEEEEeCCCcc---HHHHHHHHHHCCccceeecc
Q 031788 83 DFLKKVRSL--CKEEDRLVVGCQSGAR---SLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 83 ~~~~~~~~~--~~~~~~ivi~c~~g~~---a~~~~~~L~~~G~~~v~~l~ 127 (153)
++...+.+. -+++.+|++.++.... -..+...|+..|+.++.+..
T Consensus 43 ~L~~~l~~~~~~~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l~t 92 (99)
T 2pfu_A 43 TMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVG 92 (99)
T ss_dssp SHHHHHHHHSSSCCSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEECTT
T ss_pred HHHHHHHHHHhcCCCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 666666665 3466789998886654 34666778899999987654
No 137
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=55.11 E-value=25 Score=24.51 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=35.1
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCccceee-----c-cccHHHHHhCCCcee
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN-----F-GGGHMAWVQNGLKVK 141 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~-----l-~gG~~~w~~~g~~~~ 141 (153)
.++++|+++++ +|.....+++.|++.|-..+.+ . .+|.+...+.|.|+.
T Consensus 109 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v~ 166 (205)
T 2wns_A 109 NPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLH 166 (205)
T ss_dssp CTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEEE
T ss_pred CCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeEE
Confidence 46889999977 7777888899999999775432 1 245566666677664
No 138
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=54.84 E-value=18 Score=27.56 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=30.4
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
.++.+++|+|++-..+..++..|...|+. +..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGIK-AKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCC-EEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCCC-cEEEec
Confidence 57889999999877888999999999987 777877
No 139
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=54.59 E-value=35 Score=21.00 Aligned_cols=31 Identities=13% Similarity=-0.014 Sum_probs=25.3
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccc
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKH 122 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~ 122 (153)
+.++..+.+..........+..+++..||+=
T Consensus 50 l~~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v 80 (98)
T 1jdq_A 50 MKPGEILEVWIDYPMSKERIPETVKKLGHEV 80 (98)
T ss_dssp CCTTCEEEEEESSCTHHHHHHHHHHHSSCCE
T ss_pred CCCCCEEEEEECCccHHHHHHHHHHHCCCEE
Confidence 4788888888877776788889999999973
No 140
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=54.58 E-value=17 Score=26.51 Aligned_cols=51 Identities=16% Similarity=0.231 Sum_probs=36.2
Q ss_pred ccCCCeEEEEeC---CCccHHHHHHHHHHCCccceee---cc----ccHHHHHhCCCceec
Q 031788 92 CKEEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN---FG----GGHMAWVQNGLKVKA 142 (153)
Q Consensus 92 ~~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~---l~----gG~~~w~~~g~~~~~ 142 (153)
+.++++|+++.+ +|.....+++.|++.|...+.+ ++ +|.+...+.|.++..
T Consensus 146 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~s 206 (243)
T 3dez_A 146 VTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVT 206 (243)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred cCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEE
Confidence 357899999977 7888889999999999875432 22 345556566776643
No 141
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=54.32 E-value=52 Score=24.30 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=57.4
Q ss_pred cceeecHHHHHHHHhCCCeEEecCChhhhhcCCCC-CcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCC
Q 031788 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVD-AAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 105 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~-ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g 105 (153)
....+|..-...+-+.+.++.|.|...+... +++ ++ ..++.............+..+.+.+....++.|++.+.+.
T Consensus 36 dp~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~--~~i~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GD 112 (294)
T 2ybo_A 36 DPGLLTLRAWALLQQAEVVVYDRLVARELIA-LLPESC--QRIYVGKRCGHHSLPQEEINELLVRLARQQRRVVRLKGGD 112 (294)
T ss_dssp CGGGSCHHHHHHHTTCSEEEECTTSCHHHHH-HSCTTS--EEEECC--------CHHHHHHHHHHHHHTTCCEEEEEEBC
T ss_pred CHHHHHHHHHHHHHcCCEEEEcCCCCHHHHH-hcccCC--eEEecccccccccCCHHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3456776666444445677788876554433 222 22 1111110000001111234444444444677777775533
Q ss_pred ----ccHHHHHHHHHHCCccceeecccc--H-HHHHhCCCcee
Q 031788 106 ----ARSLHATADLLGAGFKHVSNFGGG--H-MAWVQNGLKVK 141 (153)
Q Consensus 106 ----~~a~~~~~~L~~~G~~~v~~l~gG--~-~~w~~~g~~~~ 141 (153)
.+.....+.|.+.|++ +.++.|= + .+....|.|+.
T Consensus 113 P~i~g~g~~l~~~l~~~gi~-vevIPGiSS~~aa~a~~Giplt 154 (294)
T 2ybo_A 113 PFIFGRGAEELERLLEAGVD-CQVVPGVTAASGCSTYAGIPLT 154 (294)
T ss_dssp TTSSSSHHHHHHHHHHTTCC-EEEECCCCHHHHHHHHTTCCSC
T ss_pred CCccCCHHHHHHHHHHCCCC-EEEECCHHHHHHHHHHcCCCcc
Confidence 2456777888888977 7888763 2 33455677764
No 142
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=54.31 E-value=57 Score=23.40 Aligned_cols=107 Identities=10% Similarity=-0.012 Sum_probs=58.4
Q ss_pred CcceeecHHHHHHHHhCCCeEE-ecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 26 AEVITVDVRAAKNLLESGYGYL-DVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~~~~iI-DvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
.....+|......+-+.+.++. |.+...+.....-+++ .-+... ....++..+.+.+....++.|++.+.+
T Consensus 15 G~~~~lT~~A~~~L~~advv~~~~~~~~~~~l~~~~~~~--~~~~~~------~~~~~~~~~~i~~~~~~g~~V~~l~~G 86 (253)
T 4e16_A 15 GDKELITLKGYKLLSNADVVIYAGSLVNPELLEYCKEDC--QIHNSA------HMDLQEIIDVMREGIENNKSVVRLQTG 86 (253)
T ss_dssp SCGGGSCHHHHHHHHHCSEEEECTTTSCGGGGGGSCTTC--EEEEGG------GCCHHHHHHHHHHHHHTTCCEEEEESB
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHhhcCCCC--EEEecC------CCCHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3456688777755555666666 6655444332211233 111110 011124444544444577888888753
Q ss_pred C----ccHHHHHHHHHHCCccceeecccc--H-HHHHhCCCcee
Q 031788 105 G----ARSLHATADLLGAGFKHVSNFGGG--H-MAWVQNGLKVK 141 (153)
Q Consensus 105 g----~~a~~~~~~L~~~G~~~v~~l~gG--~-~~w~~~g~~~~ 141 (153)
. .+.....+.|.+.|++ +.++.|= + .+....|.|+.
T Consensus 87 DP~i~~~~~~l~~~l~~~gi~-veviPGiSS~~aa~a~~G~plt 129 (253)
T 4e16_A 87 DFSIYGSIREQVEDLNKLNID-YDCTPGVSSFLGAASSLGVEYT 129 (253)
T ss_dssp CTTTTCCHHHHHHHHHHHTCC-EEEECCCCHHHHHHHHHTCCSC
T ss_pred CCccccCHHHHHHHHHHCCCC-EEEECCHHHHHHHHHHhCCCcc
Confidence 3 2456677888888987 7888763 2 33444577763
No 143
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=54.02 E-value=16 Score=27.55 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=31.5
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
+..+++++|++-..+..++..|...|+. +..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGHQ-VALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCCe-EEEecCCC
Confidence 5678999999988899999999999986 78888884
No 144
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=53.98 E-value=41 Score=25.09 Aligned_cols=106 Identities=14% Similarity=0.152 Sum_probs=59.3
Q ss_pred CcceeecHHHHHHHHhCCCeEE-ecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 26 AEVITVDVRAAKNLLESGYGYL-DVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~~~~iI-DvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
.....+|..-+..+-+.+.++. |.|...+.-...-++. .-+++. .....+..+.+.+....++.|++.+..
T Consensus 26 G~~~~lT~rA~~~L~~aDvI~~edtr~~~~lL~~~~~~~--~~i~~~------~~~~~~~~~~li~~l~~G~~Va~lsda 97 (296)
T 3kwp_A 26 GNLDDMTFRAVKTLTAVDLIAAEDTRNTQKLLNHFEITT--KQISFH------EHNTQERIPQLIAKLKQGMQIAQVSDA 97 (296)
T ss_dssp SCGGGCCHHHHHHHHHSSEEEESCHHHHHHHHHHTTCCC--EEEECS------TTTHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCccchhhHHHHHHhHhhhhhhhccccHHHHhhheeeee--eeeehh------hcchhhHhHHHHHHHhcCceEEEeccC
Confidence 3456788777766656677888 7775544332111122 112221 111123344444434578889998743
Q ss_pred C-----ccHHHHHHHHHHCCccceeecccc---HHHHHhCCCce
Q 031788 105 G-----ARSLHATADLLGAGFKHVSNFGGG---HMAWVQNGLKV 140 (153)
Q Consensus 105 g-----~~a~~~~~~L~~~G~~~v~~l~gG---~~~w~~~g~~~ 140 (153)
| .......+.+.+.|++ |.++.|- ..+....|.|.
T Consensus 98 GdP~i~~~g~~lv~~~~~~gi~-v~viPGiSA~~aA~a~~Glp~ 140 (296)
T 3kwp_A 98 GMPSISDPGHELVNACIDAHIP-VVPLPGANAGLTALIASGLAP 140 (296)
T ss_dssp BCTTSSHHHHHHHHHHHHTTCC-EEECCCCCHHHHHHHHHSSCC
T ss_pred CCCCCCCCchHHHHHHHHcCCC-eeeCCCcccchHHHHhccCCC
Confidence 3 2355677788888987 7888773 23444456665
No 145
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=53.95 E-value=11 Score=23.68 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=18.7
Q ss_pred CCeEEEEeCCCccHH-HHH----HHHHHCCcc
Q 031788 95 EDRLVVGCQSGARSL-HAT----ADLLGAGFK 121 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~-~~~----~~L~~~G~~ 121 (153)
-++|+++|++|..+. .+. +.+.+.|++
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 467999999997544 333 345677886
No 146
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=53.24 E-value=16 Score=24.63 Aligned_cols=32 Identities=25% Similarity=0.214 Sum_probs=26.7
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
++++|+++++ +|.....+++.|++.|-..|+.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEE
Confidence 6889999987 7777788899999999877653
No 147
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=53.11 E-value=38 Score=21.01 Aligned_cols=84 Identities=18% Similarity=0.317 Sum_probs=51.0
Q ss_pred HHHHHHHHhC-CCeEEecCChhhhhcC------CCCCcceeCccccccCCCCCCCChHHHHHHHhh---ccCCCeEEEEe
Q 031788 33 VRAAKNLLES-GYGYLDVRTAEEFKEG------HVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL---CKEEDRLVVGC 102 (153)
Q Consensus 33 ~~~~~~~~~~-~~~iIDvR~~~e~~~g------hi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ivi~c 102 (153)
...+.+.+++ +..+=-||+++|.... ..... .+-+-. .+.++.+..-+. +...--|++|.
T Consensus 15 lrkfkdiikkngfkvrtvrspqelkdsieelvkkynat-ivvvvv---------ddkewaekairfvkslgaqvliiiyd 84 (134)
T 2l69_A 15 LRKFKDIIKKNGFKVRTVRSPQELKDSIEELVKKYNAT-IVVVVV---------DDKEWAEKAIRFVKSLGAQVLIIIYD 84 (134)
T ss_dssp HHHHHHHHHHTTCEEEEECSHHHHHHHHHHHTTCCCCE-EEEEEC---------SSHHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred HHHHHHHHHhcCceEEEecCHHHHHHHHHHHHHHhCCe-EEEEEE---------ccHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 3445666654 5788889999887531 11111 011111 122444433322 35667789998
Q ss_pred CCCccHHHHHHHHHHCCccceeecc
Q 031788 103 QSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 103 ~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
++..|-....+..+..||+ |..+.
T Consensus 85 qdqnrleefsrevrrrgfe-vrtvt 108 (134)
T 2l69_A 85 QDQNRLEEFSREVRRRGFE-VRTVT 108 (134)
T ss_dssp SCHHHHHHHHHHHHHTTCC-EEEES
T ss_pred CchhHHHHHHHHHHhcCce-EEEec
Confidence 8888889999999999998 65554
No 148
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=52.77 E-value=18 Score=27.01 Aligned_cols=37 Identities=14% Similarity=0.060 Sum_probs=31.8
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.++.+++++|++-..+..++..|...|+. +..+.|++
T Consensus 241 ~~~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~~~~~ 277 (395)
T 3pey_A 241 MTIGSSIIFVATKKTANVLYGKLKSEGHE-VSILHGDL 277 (395)
T ss_dssp TTSSEEEEECSCHHHHHHHHHHHHHTTCC-CEEECTTS
T ss_pred ccCCCEEEEeCCHHHHHHHHHHHHhcCCc-EEEeCCCC
Confidence 45678999999888889999999999986 78888875
No 149
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=52.28 E-value=18 Score=27.44 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=31.0
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
...+++++|++-..+..++..|.+.|+. +..+.|++
T Consensus 275 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~ 310 (410)
T 2j0s_A 275 TITQAVIFCNTKRKVDWLTEKMREANFT-VSSMHGDM 310 (410)
T ss_dssp TSSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTS
T ss_pred CCCcEEEEEcCHHHHHHHHHHHHhCCCc-eEEeeCCC
Confidence 4568999999888889999999999986 78888885
No 150
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=52.13 E-value=29 Score=26.38 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=24.3
Q ss_pred CcceeCccccccCCCCCCCChH----HHHHHHhhccCCCeEEEEeCCCc-cHH
Q 031788 62 AAKIFNIPYMFNTPEGRVKNPD----FLKKVRSLCKEEDRLVVGCQSGA-RSL 109 (153)
Q Consensus 62 ga~~i~ip~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ivi~c~~g~-~a~ 109 (153)
|..++.+|..+ ...+.++ |.+.+.. ++++..|+++|..|. |+.
T Consensus 181 Gl~Y~rlPi~D----~~aP~~e~id~fl~~v~~-l~~~~~i~vHC~aG~GRTg 228 (314)
T 3mmj_A 181 GMRYFRIAATD----HVWPTPENIDRFLAFYRT-LPQDAWLHFHSEAGVGRTT 228 (314)
T ss_dssp TCEEEEEEECT----TSCCCHHHHHHHHHHHHT-CCTTCEEEEECSSSSHHHH
T ss_pred CCEEEEeCcCC----CCCCCHHHHHHHHHHHHH-cCCCCCEEEECCCCCchHH
Confidence 44455666642 2233333 3333333 467789999999775 543
No 151
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=51.57 E-value=22 Score=26.50 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=22.5
Q ss_pred ccHHHHHHHHHHCCccceeeccccHH
Q 031788 106 ARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 106 ~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
..-..+++.|+++|..+...|+||-.
T Consensus 219 ~tl~ela~~~~~lG~~~AlnLDGGgS 244 (285)
T 3ohg_A 219 LTLPHLATMMKAVGCYNAINLDGGGS 244 (285)
T ss_dssp BCHHHHHHHHHHHTCSEEEECCCGGG
T ss_pred CCHHHHHHHHHHcCCCeEEECCCCcc
Confidence 44678899999999999999999854
No 152
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=51.56 E-value=18 Score=21.43 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=23.3
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHC
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGA 118 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~ 118 (153)
+..+++|.++|+++..+....+.+.+.
T Consensus 47 IAGDDTIlvi~r~~~~a~~l~~~i~~l 73 (78)
T 1xxa_A 47 IAGDDTIFTTPANGFTVKDLYEAILEL 73 (78)
T ss_dssp EECSSEEEEEECTTCCHHHHHHHHHTT
T ss_pred EecCCEEEEEECCHHHHHHHHHHHHHH
Confidence 457899999999999999999988764
No 153
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=51.40 E-value=17 Score=24.60 Aligned_cols=32 Identities=19% Similarity=0.053 Sum_probs=26.5
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
.++++|+++++ +|.....+++.|++.|-..|.
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 152 (180)
T 1zn8_A 118 EPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLE 152 (180)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEE
Confidence 36889999977 777888899999999987654
No 154
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=51.18 E-value=15 Score=31.65 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=32.5
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.++++++|+|++-..+...+..|.+.|+. ...+.|+.
T Consensus 472 ~~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~-~~vLhgkq 508 (822)
T 3jux_A 472 KKGQPVLVGTTSIEKSELLSSMLKKKGIP-HQVLNAKY 508 (822)
T ss_dssp HHTCCEEEEESSHHHHHHHHHHHHTTTCC-CEEECSCH
T ss_pred hCCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCc
Confidence 46889999999999999999999999998 57788874
No 155
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=50.61 E-value=63 Score=22.75 Aligned_cols=112 Identities=13% Similarity=0.018 Sum_probs=60.1
Q ss_pred CcceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCC
Q 031788 26 AEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 105 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g 105 (153)
.....+|......+-+.+.++.|.+...+.... + ++ .-++.............+..+.+.+....++.|++.+.+.
T Consensus 13 G~~~~LT~~A~~~L~~advv~~~~~~~~~~l~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~V~~l~~GD 88 (235)
T 1ve2_A 13 GGPEHLTLKALRVLEVAEVVLHDRLVHPGVLAL-A-KG--ELVPVGKEGYGGKTPQEAITARLIALAREGRVVARLKGGD 88 (235)
T ss_dssp SSGGGSBHHHHHHHHHCSEEEECTTSCHHHHTT-C-CS--EEEEC-------CCCHHHHHHHHHHHHHTTCEEEEEESBC
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCCCCHHHHHh-h-Cc--EEEEecccCcccccCHHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 345567877665555567777887765554432 2 33 2222210000001111234444444445678888876633
Q ss_pred ----ccHHHHHHHHHHCCccceeecccc---HHHHHhCCCceec
Q 031788 106 ----ARSLHATADLLGAGFKHVSNFGGG---HMAWVQNGLKVKA 142 (153)
Q Consensus 106 ----~~a~~~~~~L~~~G~~~v~~l~gG---~~~w~~~g~~~~~ 142 (153)
.......+.+.+.|++ +.++.|= ..+....|.|+..
T Consensus 89 P~i~~~~~~l~~~l~~~gi~-v~viPGiSs~~aa~a~~g~pl~~ 131 (235)
T 1ve2_A 89 PMVFGRGGEEALALRRAGIP-FEVVPGVTSAVGALSALGLPLTH 131 (235)
T ss_dssp TTSSTTHHHHHHHHHHHTCC-EEEECCCCTTHHHHHHTTCCSCB
T ss_pred CCcccCHHHHHHHHHHCCCC-EEEECCHhHHHHHHHHcCCCccc
Confidence 2355667778888876 7788763 2345567877643
No 156
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=50.50 E-value=16 Score=23.78 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=21.7
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
+++|+.|..+...++.|.+.|++ |.+++-
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~-V~vid~ 34 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQN-VTVISN 34 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 44556777888889999999976 666654
No 157
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=50.07 E-value=15 Score=26.91 Aligned_cols=38 Identities=13% Similarity=-0.043 Sum_probs=30.2
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHH-CCccceeeccccH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGH 130 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~-~G~~~v~~l~gG~ 130 (153)
...+++++|+|+...........|.. .|+. +..+.|+.
T Consensus 109 ~~~~~kvlIFs~~~~~~~~l~~~L~~~~g~~-~~~l~G~~ 147 (271)
T 1z5z_A 109 LDEGDKIAIFTQFVDMGKIIRNIIEKELNTE-VPFLYGEL 147 (271)
T ss_dssp HHTTCCEEEEESCHHHHHHHHHHHHHHHCSC-CCEECTTS
T ss_pred HhCCCeEEEEeccHHHHHHHHHHHHHhcCCc-EEEEECCC
Confidence 45788999999987777788888887 4877 77788875
No 158
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=49.82 E-value=33 Score=21.09 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=28.6
Q ss_pred HHHHHHHhhccCCCeEEEEeC------CCccHHHHHHHHHHCCcc
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQ------SGARSLHATADLLGAGFK 121 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~------~g~~a~~~~~~L~~~G~~ 121 (153)
+..+.+.+++ ...+|++|.. .|..+.++.+.|.+.|++
T Consensus 6 ~~~~~v~~~i-~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~ 49 (109)
T 3ipz_A 6 QLKDTLEKLV-NSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVP 49 (109)
T ss_dssp HHHHHHHHHH-TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHH-ccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCC
Confidence 5556666654 4567888876 478889999999999976
No 159
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=49.73 E-value=12 Score=28.36 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=31.5
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.+..+++++|++-..+..++..|.+.|+. +..+.|++
T Consensus 256 ~~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 292 (400)
T 1s2m_A 256 LQINQAIIFCNSTNRVELLAKKITDLGYS-CYYSHARM 292 (400)
T ss_dssp SCCSEEEEECSSHHHHHHHHHHHHHHTCC-EEEECTTS
T ss_pred cCCCcEEEEEecHHHHHHHHHHHHhcCCC-eEEecCCC
Confidence 35678999999888889999999999987 77888876
No 160
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=49.68 E-value=15 Score=23.22 Aligned_cols=28 Identities=11% Similarity=0.318 Sum_probs=19.1
Q ss_pred CCCeEEEEeCCCccHHH-HHHH----HHHCCcc
Q 031788 94 EEDRLVVGCQSGARSLH-ATAD----LLGAGFK 121 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~-~~~~----L~~~G~~ 121 (153)
+-++|+++|++|..+.. ++.. +.+.|++
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 34579999999976443 4444 4567876
No 161
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=49.43 E-value=9.1 Score=24.00 Aligned_cols=28 Identities=7% Similarity=0.197 Sum_probs=18.5
Q ss_pred CCCeEEEEeCCCccHHHHHHHH----HHCCcc
Q 031788 94 EEDRLVVGCQSGARSLHATADL----LGAGFK 121 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L----~~~G~~ 121 (153)
+.-+|++.|++|..+..++..+ .+.|++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 3456999999887543555544 456775
No 162
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=49.37 E-value=22 Score=25.09 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=26.9
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+++.++++++ +|.....+++.|++.|-.+++.+
T Consensus 123 ~~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~ 158 (209)
T 1i5e_A 123 EERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFM 158 (209)
T ss_dssp TTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 4678888877 78888899999999998877543
No 163
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=48.59 E-value=20 Score=24.50 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=26.4
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
++++|+++++ +|.....+++.|++.|-..|+.
T Consensus 97 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 131 (185)
T 2geb_A 97 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 131 (185)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 5788999977 7778888899999999877653
No 164
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=48.32 E-value=19 Score=21.31 Aligned_cols=26 Identities=8% Similarity=0.098 Sum_probs=22.7
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLG 117 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~ 117 (153)
+..+++|+++|.+...+..+.+.+.+
T Consensus 52 IAGDDTIlvi~r~~~~a~~l~~~l~~ 77 (79)
T 2zfz_A 52 IAGDDTILVVAREPTTGAQLAGMFEN 77 (79)
T ss_dssp EECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred EecCCEEEEEECCHHHHHHHHHHHHh
Confidence 67889999999999999988888765
No 165
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=48.31 E-value=19 Score=24.45 Aligned_cols=28 Identities=29% Similarity=0.369 Sum_probs=22.8
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
|++...|.....+|..|.+.|++ |.+++
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~-V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQ-VHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCC-EEEEE
Confidence 34447888889999999999997 88887
No 166
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=48.21 E-value=21 Score=24.49 Aligned_cols=49 Identities=16% Similarity=0.180 Sum_probs=35.4
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCcccee---ecc----ccHHHHHhCCCcee
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS---NFG----GGHMAWVQNGLKVK 141 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~---~l~----gG~~~w~~~g~~~~ 141 (153)
.++++|+++++ +|.....+++.|++.|-..|. .+. +|.....+.|.|+.
T Consensus 124 ~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~~v~ 182 (190)
T 2dy0_A 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSY 182 (190)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTCEEE
T ss_pred CCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCCcEE
Confidence 47889999987 777788899999999987653 221 35555555577664
No 167
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=47.98 E-value=40 Score=21.66 Aligned_cols=42 Identities=12% Similarity=0.228 Sum_probs=30.7
Q ss_pred HHHHHHHhhccCCCeEEEEeC----CCccHHHHHHHHHHCCccceee
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQ----SGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~----~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
+..+.+.++ +.++++.+.++ ....-......|++.||..+++
T Consensus 8 qivd~il~~-~egtri~iLAPvv~~rKg~~~~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 8 QMVDRLLSY-PERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVRI 53 (119)
T ss_dssp HHHHHHHTS-CTTCEEEEEEEEEEEECSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhC-CCCCEEEEEEEEeeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 566666665 78889988877 1223467788999999987765
No 168
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=47.50 E-value=22 Score=24.48 Aligned_cols=49 Identities=16% Similarity=0.201 Sum_probs=33.8
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCccceee---cc----ccHHHHHhCCCcee
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN---FG----GGHMAWVQNGLKVK 141 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~---l~----gG~~~w~~~g~~~~ 141 (153)
.++++|+++++ +|.....+++.|++.|-..|+. +. +|.....+.|.++.
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~~~~~~ 176 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVE 176 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTCCEE
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchhhhHHhcCCcEE
Confidence 37889999987 7777888899999999876532 11 34444444555543
No 169
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=47.42 E-value=22 Score=24.31 Aligned_cols=32 Identities=6% Similarity=0.015 Sum_probs=26.7
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
.++++|+++++ +|.....+++.|++.|-..|.
T Consensus 120 ~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 154 (187)
T 1g2q_A 120 PAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLE 154 (187)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEE
Confidence 36889999977 788888899999999987664
No 170
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=47.37 E-value=82 Score=23.19 Aligned_cols=88 Identities=15% Similarity=0.167 Sum_probs=49.8
Q ss_pred ecHHHHHHHHh----CC-CeEEecCChhhhhcCCCCCcceeCccccccCCCCCCC-ChHHHHHHHhhccCCCeEEEEeCC
Q 031788 31 VDVRAAKNLLE----SG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 31 i~~~~~~~~~~----~~-~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
++.+++.++++ -+ .++++|.+..|.....-.|+..+-+-.-.+ ..+. +-+....+...+++ .++++|.+
T Consensus 153 L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l---~t~~~dl~~~~~L~~~ip~--~~~vIaes 227 (272)
T 3tsm_A 153 VDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNL---RSFEVNLAVSERLAKMAPS--DRLLVGES 227 (272)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCT---TTCCBCTHHHHHHHHHSCT--TSEEEEES
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCC---ccCCCChHHHHHHHHhCCC--CCcEEEEC
Confidence 34556555543 24 478999998887653333332221111000 1111 11344444444444 35677889
Q ss_pred CccHHHHHHHHHHCCccce
Q 031788 105 GARSLHATADLLGAGFKHV 123 (153)
Q Consensus 105 g~~a~~~~~~L~~~G~~~v 123 (153)
|..+..-+..+.+.|++-|
T Consensus 228 GI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 228 GIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp SCCSHHHHHHHHTTTCCEE
T ss_pred CCCCHHHHHHHHHcCCCEE
Confidence 9988888999999998854
No 171
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=46.97 E-value=22 Score=24.22 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=26.7
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++++++++++ +|.....+++.|++.|-..|...
T Consensus 94 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~ 129 (183)
T 1hgx_A 94 EGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVC 129 (183)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 6788999977 77778888999999998776543
No 172
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=46.96 E-value=23 Score=24.73 Aligned_cols=49 Identities=12% Similarity=0.053 Sum_probs=32.9
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHHhCCCceecC
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAR 143 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~~~~ 143 (153)
..+++++|. .|..+..+++.|.+.||+-+-+++.....+.-.|+|+-..
T Consensus 11 ~~k~v~IiG-AGg~g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~Vlg~ 59 (220)
T 4ea9_A 11 AIGGVVIIG-GGGHAKVVIESLRACGETVAAIVDADPTRRAVLGVPVVGD 59 (220)
T ss_dssp CSSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSCC---CBTTBCEEES
T ss_pred CCCCEEEEc-CCHHHHHHHHHHHhCCCEEEEEEeCCcccCcCCCeeEECC
Confidence 446789995 4555678888888899987778887655443456776543
No 173
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=46.75 E-value=21 Score=23.09 Aligned_cols=27 Identities=22% Similarity=0.514 Sum_probs=18.5
Q ss_pred CCCeEEEEeCCCccHHHH-HH----HHHHCCc
Q 031788 94 EEDRLVVGCQSGARSLHA-TA----DLLGAGF 120 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~-~~----~L~~~G~ 120 (153)
+-++|+++|++|..+... +. .+.+.|+
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 346799999999765444 33 4556787
No 174
>1tf5_A Preprotein translocase SECA subunit; ATPase, helicase, translocation, secretion, protein transport; 2.18A {Bacillus subtilis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1tf2_A 3iqy_A 1m6n_A 1m74_A* 3iqm_A 3jv2_A* 2ibm_A* 3dl8_A 1sx0_A 1sx1_A 1tm6_A
Probab=46.73 E-value=16 Score=31.69 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=33.0
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
.++++++|+|++-..+...+..|...|+. +..|.|...
T Consensus 430 ~~~~pvLVft~s~~~se~Ls~~L~~~gi~-~~vLhg~~~ 467 (844)
T 1tf5_A 430 MTGQPVLVGTVAVETSELISKLLKNKGIP-HQVLNAKNH 467 (844)
T ss_dssp HHTCCEEEEESCHHHHHHHHHHHHTTTCC-CEEECSSCH
T ss_pred hcCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCcc
Confidence 46789999999999999999999999998 677888753
No 175
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=46.67 E-value=80 Score=24.90 Aligned_cols=111 Identities=12% Similarity=0.038 Sum_probs=60.1
Q ss_pred cceeecHHHHHHHHhCCCeEEecCChhhhhcCCCC-CcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCC
Q 031788 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVD-AAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 105 (153)
Q Consensus 27 ~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~-ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g 105 (153)
....+|...+..+-+.+.++.|.+...+... +++ ++ ..++.............+..+.+.+....++.|++.+.+.
T Consensus 227 d~~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~--~~~~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GD 303 (457)
T 1pjq_A 227 DAGLLTLKGLQQIQQADIVVYDRLVSDDIMN-LVRRDA--DRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLKGGD 303 (457)
T ss_dssp CGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TSCTTS--EEEECSCC---CCCTTHHHHHHHHHHHHTTCEEEEEESBC
T ss_pred ChHHccHHHHHHHHhCCEEEEeCCCCHHHHh-hcccCC--EEEeccccccccCCCHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3456787776555566788888876555443 332 23 2222211000111223355555554445678888776533
Q ss_pred ----ccHHHHHHHHHHCCccceeecccc--H-HHHHhCCCcee
Q 031788 106 ----ARSLHATADLLGAGFKHVSNFGGG--H-MAWVQNGLKVK 141 (153)
Q Consensus 106 ----~~a~~~~~~L~~~G~~~v~~l~gG--~-~~w~~~g~~~~ 141 (153)
.+.....+.|.+.|++ +.++.|= + .+....|.|+.
T Consensus 304 P~i~g~g~~l~~~l~~~gi~-v~vvPGiSs~~aa~a~~Giplt 345 (457)
T 1pjq_A 304 PFIFGRGGEELETLCHAGIP-FSVVPGITAASGCSAYSGIPLT 345 (457)
T ss_dssp TTTSSSHHHHHTTTTTTTCC-EEEECCCCHHHHHHHHTTCCSC
T ss_pred CCccCCHHHHHHHHHHCCCC-EEEeCCHhHHHHHHHHcCCCcc
Confidence 2345556677777876 7777763 2 23444677764
No 176
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=46.43 E-value=21 Score=22.72 Aligned_cols=43 Identities=19% Similarity=0.137 Sum_probs=26.4
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeeccccH---HHHHhCCCceec
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFGGGH---MAWVQNGLKVKA 142 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~---~~w~~~g~~~~~ 142 (153)
+++|+.|..+..+++.|.+.|++ |..++-.- ....+.+..+..
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~-V~~id~~~~~~~~~~~~~~~~~~ 54 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKK-VLAVDKSKEKIELLEDEGFDAVI 54 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTTCEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHCCCcEEE
Confidence 44556677778888888888875 66655432 234445554443
No 177
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=45.73 E-value=32 Score=23.45 Aligned_cols=49 Identities=16% Similarity=0.106 Sum_probs=33.2
Q ss_pred HHHHHhhccCCCeEEEEeCCCc--cHHHHHHHHHH---CCccceeeccccHHHHH
Q 031788 85 LKKVRSLCKEEDRLVVGCQSGA--RSLHATADLLG---AGFKHVSNFGGGHMAWV 134 (153)
Q Consensus 85 ~~~~~~~~~~~~~ivi~c~~g~--~a~~~~~~L~~---~G~~~v~~l~gG~~~w~ 134 (153)
.+.+.+.++++.-+|+.|..|. .|..+++.|.. .| .++.++.||-.++.
T Consensus 55 ~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~i~FvIGGa~Gl~ 108 (163)
T 1o6d_A 55 TEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KDITILIGGPYGLN 108 (163)
T ss_dssp HHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CCEEEEECCTTCCC
T ss_pred HHHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCCC
Confidence 3344444555555777777775 57888887764 48 78999999976543
No 178
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=45.64 E-value=47 Score=19.86 Aligned_cols=30 Identities=10% Similarity=0.072 Sum_probs=24.2
Q ss_pred cc-CCCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 92 CK-EEDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 92 ~~-~~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
.+ ++..+.+..++......+..++...||.
T Consensus 25 l~~~G~~L~V~~dd~~a~~dI~~~~~~~G~~ 55 (87)
T 3hz7_A 25 LGEAGGVVTVLVDNDISRQNLQKMAEGMGYQ 55 (87)
T ss_dssp TGGGCCEEEEEESSHHHHHHHHHHHHHHTCE
T ss_pred ccCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 45 7888888887766667888899999997
No 179
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=45.54 E-value=15 Score=22.97 Aligned_cols=26 Identities=4% Similarity=-0.051 Sum_probs=18.9
Q ss_pred CeEEEEeCCCccHHHHHHH----HHHCCcc
Q 031788 96 DRLVVGCQSGARSLHATAD----LLGAGFK 121 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~----L~~~G~~ 121 (153)
++|++.|++|..+..++.. +.+.|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 4699999999865555544 5577876
No 180
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=45.48 E-value=24 Score=24.59 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=26.3
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
++++|+++++ +|.....+++.|++.|-..|+.
T Consensus 117 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 151 (205)
T 1yfz_A 117 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 151 (205)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 5788999977 7777888899999999877653
No 181
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=45.29 E-value=18 Score=27.30 Aligned_cols=38 Identities=16% Similarity=0.097 Sum_probs=29.3
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
.+..+++++|++-..+..++..|...|+. +..+.|++.
T Consensus 278 ~~~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~h~~~~ 315 (414)
T 3eiq_A 278 LTITQAVIFINTRRKVDWLTEKMHARDFT-VSAMHGDMD 315 (414)
T ss_dssp SCCSSCEEECSCHHHHHHHHHHHHTTTCC-CEEC---CH
T ss_pred CCCCcEEEEeCCHHHHHHHHHHHHhcCCe-EEEecCCCC
Confidence 35568999999888889999999999987 788888864
No 182
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=44.80 E-value=26 Score=26.41 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=28.3
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeecc
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
++++++++++ +|.....+++.|++.|-..|+.+.
T Consensus 216 ~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 5788999877 788888999999999998886554
No 183
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=44.16 E-value=36 Score=23.32 Aligned_cols=31 Identities=19% Similarity=0.059 Sum_probs=26.1
Q ss_pred ccCCCeEEEEeCCCccH--HHHHHHHHHCCccc
Q 031788 92 CKEEDRLVVGCQSGARS--LHATADLLGAGFKH 122 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a--~~~~~~L~~~G~~~ 122 (153)
+++++.+++++++|... ...+..+++.|.+=
T Consensus 75 i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~v 107 (170)
T 3jx9_A 75 LHAVDRVLIFTPDTERSDLLASLARYDAWHTPY 107 (170)
T ss_dssp CCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCE
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcE
Confidence 68999999999988764 57789999999873
No 184
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=44.04 E-value=16 Score=21.14 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=22.1
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLG 117 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~ 117 (153)
+-.+++|.++|+++..+....+++.+
T Consensus 44 IAGDDTIlvi~r~~~~a~~l~~~i~~ 69 (71)
T 1b4b_A 44 ICGDDTCLIICRTPKDAKKVSNQLLS 69 (71)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHT
T ss_pred EeeCCEEEEEECCHHHHHHHHHHHHH
Confidence 56889999999998888888888765
No 185
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=43.82 E-value=28 Score=22.72 Aligned_cols=35 Identities=11% Similarity=0.076 Sum_probs=26.1
Q ss_pred CCCeEEEEeCC---CccHHHHHHHHHHCCccceeecccc
Q 031788 94 EEDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 94 ~~~~ivi~c~~---g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
..+.|.++..+ +..+...++.|.+.||+ |+.+.-.
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~-v~~vnp~ 49 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVNPR 49 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCE-EEEECGG
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCE-EEEeCCC
Confidence 46678888665 44577888999999996 8877654
No 186
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=43.72 E-value=48 Score=19.44 Aligned_cols=31 Identities=6% Similarity=-0.068 Sum_probs=24.5
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccc
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKH 122 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~ 122 (153)
..++..+.+..........+..+++..||.-
T Consensus 34 l~~G~~l~V~~dd~~a~~di~~~~~~~G~~~ 64 (82)
T 3lvj_C 34 MQPGETLLIIADDPATTRDIPGFCTFMEHEL 64 (82)
T ss_dssp SCTTCEEEEEECCTTHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEEECCccHHHHHHHHHHHCCCEE
Confidence 4678888888777666678888899999973
No 187
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=43.36 E-value=25 Score=23.85 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=26.1
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCC-ccceee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAG-FKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G-~~~v~~ 125 (153)
++++|+++++ +|.....+++.|++.| ...|+.
T Consensus 95 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~ 130 (181)
T 1ufr_A 95 TGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYL 130 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 6788999977 7778888899999999 776653
No 188
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=43.32 E-value=31 Score=29.92 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=33.0
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
.++++++|.|.+-..+...+..|...|+. ...|.|...
T Consensus 439 ~~gqpvLVft~sie~se~Ls~~L~~~gi~-~~vLnak~~ 476 (853)
T 2fsf_A 439 AKGQPVLVGTISIEKSELVSNELTKAGIK-HNVLNAKFH 476 (853)
T ss_dssp TTTCCEEEEESSHHHHHHHHHHHHHTTCC-CEECCTTCH
T ss_pred cCCCCEEEEECcHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 57889999999988999999999999998 577887753
No 189
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=43.07 E-value=30 Score=23.63 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=26.4
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCcc--cee
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFK--HVS 124 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~--~v~ 124 (153)
.++++|+++++ +|.....+++.|++.|-. .|.
T Consensus 115 ~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~ 151 (186)
T 1l1q_A 115 GPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIY 151 (186)
T ss_dssp CTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEE
Confidence 36889999987 777778889999999988 653
No 190
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=43.01 E-value=19 Score=28.25 Aligned_cols=31 Identities=23% Similarity=0.145 Sum_probs=24.0
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
++|||+ ..|...-.+|.+|.+.|++ |.+|+-
T Consensus 2 k~VvVI-GaG~~GL~aA~~La~~G~~-V~VlEa 32 (501)
T 4dgk_A 2 KPTTVI-GAGFGGLALAIRLQAAGIP-VLLLEQ 32 (501)
T ss_dssp CCEEEE-CCHHHHHHHHHHHHHTTCC-EEEECC
T ss_pred CCEEEE-CCcHHHHHHHHHHHHCCCc-EEEEcc
Confidence 457777 5777778889999999987 777663
No 191
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=42.43 E-value=29 Score=25.05 Aligned_cols=25 Identities=28% Similarity=0.332 Sum_probs=20.4
Q ss_pred CCccHHHHHHHHHHCCccceeecccc
Q 031788 104 SGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 104 ~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
+|..+...++.|...|++ |..+.|.
T Consensus 28 SG~mG~aiA~~~~~~Ga~-V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYE-VCLITTK 52 (232)
T ss_dssp CCHHHHHHHHHHHHTTCE-EEEEECT
T ss_pred CCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 677889999999999987 7766553
No 192
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=42.34 E-value=30 Score=24.07 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=26.6
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++++|+++++ +|.....+++.|++.|-..|++.
T Consensus 119 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~ 154 (208)
T 1wd5_A 119 KGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVA 154 (208)
T ss_dssp TTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEE
Confidence 6788999977 67777888999999998877543
No 193
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=42.10 E-value=57 Score=26.13 Aligned_cols=49 Identities=20% Similarity=0.341 Sum_probs=33.1
Q ss_pred ccCCCeEEEEeCCCcc---HHHHHHHHHHCCccceeec-cc---------cHHHHHhCCCceec
Q 031788 92 CKEEDRLVVGCQSGAR---SLHATADLLGAGFKHVSNF-GG---------GHMAWVQNGLKVKA 142 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~---a~~~~~~L~~~G~~~v~~l-~g---------G~~~w~~~g~~~~~ 142 (153)
.++.++|+++|..|.. +.-++++|... |+ |.++ .+ -+..|++.|.++..
T Consensus 43 ~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~-~~-V~v~~~~~~~~~~a~~~~~~~~~~g~~~~~ 104 (475)
T 3k5w_A 43 ASLGAKVIILCGSGDNGGDGYALARRLVGR-FR-VLVFEMKLTKSPMCQLQKERAKKAGVVIKT 104 (475)
T ss_dssp SCTTCEEEEEECSSHHHHHHHHHHHHHBTT-BE-EEEEESSCCCSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCeEEEEECCCCCHHHHHHHHHHHHcC-Cc-eEEEEeCCCCCHHHHHHHHHHHHCCCcEec
Confidence 4567899999998764 56778888866 65 4432 22 13557777877654
No 194
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=41.94 E-value=29 Score=24.20 Aligned_cols=49 Identities=18% Similarity=0.256 Sum_probs=33.7
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCccce--e-ecc----ccHHHHHhCCCcee
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHV--S-NFG----GGHMAWVQNGLKVK 141 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v--~-~l~----gG~~~w~~~g~~~~ 141 (153)
-++++++++++ +|.....+++.|++.|-..+ . .+. +|.+...+.|.|+.
T Consensus 115 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~ 173 (211)
T 2aee_A 115 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLI 173 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred CCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEE
Confidence 46889999977 77788889999999998764 2 222 24444444566554
No 195
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=41.82 E-value=32 Score=27.47 Aligned_cols=37 Identities=8% Similarity=0.054 Sum_probs=31.1
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHC---CccceeeccccH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGA---GFKHVSNFGGGH 130 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~---G~~~v~~l~gG~ 130 (153)
.++.+++|||++...+..++..|... |+. +..+.|++
T Consensus 337 ~~~~~~iVF~~s~~~~~~l~~~L~~~~~~~~~-v~~~h~~~ 376 (563)
T 3i5x_A 337 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLP-ILEFHGKI 376 (563)
T ss_dssp TTCCEEEEECSCHHHHHHHHHHHHHHHTTTSC-EEEESTTS
T ss_pred CCCCcEEEEcCcHHHHHHHHHHHHHhccCCce-EEEecCCC
Confidence 56789999999988888999999876 766 77888885
No 196
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=41.60 E-value=45 Score=20.50 Aligned_cols=30 Identities=17% Similarity=0.123 Sum_probs=23.3
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
++++..+.+..........+..+++..||+
T Consensus 51 l~~Ge~L~Vl~dd~~a~~dIp~~~~~~G~~ 80 (97)
T 1je3_A 51 LKKGEILEVVSDCPQSINNIPLDARNHGYT 80 (97)
T ss_dssp CCSSCEEEEEEBCSSSSCHHHHHHHHHTCS
T ss_pred CCCCCEEEEEECCcchHHHHHHHHHHCCCE
Confidence 477888888877666556778889999987
No 197
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=41.59 E-value=34 Score=19.75 Aligned_cols=30 Identities=17% Similarity=0.100 Sum_probs=23.7
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
+.++..+.+...+......+..+++..||.
T Consensus 30 l~~G~~L~V~~dd~~a~~di~~~~~~~G~~ 59 (78)
T 1pav_A 30 AKVGEVISVYSTDAGTKKDAPAWIQKSGQE 59 (78)
T ss_dssp SCTTCCEECCBSSSCHHHHHHHHHHHHTEE
T ss_pred CCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 467788888877666667888889999987
No 198
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=41.35 E-value=49 Score=24.82 Aligned_cols=84 Identities=14% Similarity=0.308 Sum_probs=42.8
Q ss_pred ecHHHHHHHHhC----CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCCh----HHHHHHHhhc--cCCCeEEE
Q 031788 31 VDVRAAKNLLES----GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSLC--KEEDRLVV 100 (153)
Q Consensus 31 i~~~~~~~~~~~----~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~ivi 100 (153)
-...++..++++ ...+++..++..|....+.. ..+++|+... ..+.. ++.+.+.+.+ +++.+|++
T Consensus 42 ~~i~~Vv~~l~~~~~~~~~v~nl~~e~~y~~~~~~~-~~~~~~~~D~----~~P~~~~l~~~~~~i~~~l~~~~~~~VlV 116 (324)
T 1d5r_A 42 NNIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNC-RVAQYPFEDH----NPPQLELIKPFCEDLDQWLSEDDNHVAAI 116 (324)
T ss_dssp CBHHHHHHHHHHHSSSCEEEEEEESSCCCCTTSCSS-CEEEEEECTT----SCCCHHHHHHHHHHHHHHHTTTSCSEEEE
T ss_pred cCHHHHHHHHHhcCCCcEEEEEcCCCCCCChHHhCC-eEEEEeecCC----CCCcHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 445566665542 26788886554444333321 2355665322 22221 2333333222 35689999
Q ss_pred EeCCCc-cHH-HHHHHHHHCC
Q 031788 101 GCQSGA-RSL-HATADLLGAG 119 (153)
Q Consensus 101 ~c~~g~-~a~-~~~~~L~~~G 119 (153)
+|..|. |+. .++.+|...|
T Consensus 117 HC~aG~gRTGt~ia~yL~~~~ 137 (324)
T 1d5r_A 117 HCKAGKGRTGVMICAYLLHRG 137 (324)
T ss_dssp ECSSSSHHHHHHHHHHHHHHT
T ss_pred ECCCCCChhHHHHHHHHHHhc
Confidence 999774 654 4455555444
No 199
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=41.29 E-value=27 Score=23.57 Aligned_cols=32 Identities=9% Similarity=0.199 Sum_probs=26.1
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCC-ccceee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAG-FKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G-~~~v~~ 125 (153)
++++|+++++ +|.....+++.|++.| -..|+.
T Consensus 97 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~ 132 (181)
T 1a3c_A 97 TDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQL 132 (181)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 6788999977 7778888899999997 776653
No 200
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=41.18 E-value=31 Score=24.24 Aligned_cols=31 Identities=10% Similarity=-0.021 Sum_probs=26.2
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++|+++++ +|.....+++.|++.|-..|+
T Consensus 117 ~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~ 150 (211)
T 1pzm_A 117 ENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLK 150 (211)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHhcCCCEEE
Confidence 6789999977 788888899999999987664
No 201
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=40.79 E-value=31 Score=25.57 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=26.2
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++++++++ +|.....+++.|++.|-..|+
T Consensus 204 ~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~ 237 (284)
T 1u9y_A 204 KDRDVFIVDDIISTGGTMATAVKLLKEQGAKKII 237 (284)
T ss_dssp TTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHCCCcEEE
Confidence 5688999977 777788999999999988775
No 202
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=40.75 E-value=30 Score=24.53 Aligned_cols=32 Identities=3% Similarity=-0.114 Sum_probs=26.6
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
++++|+++++ +|.....+++.|++.|-..|++
T Consensus 102 ~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v 136 (220)
T 1tc1_A 102 EGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKT 136 (220)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 6789999977 7888888999999999877653
No 203
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=40.70 E-value=20 Score=30.18 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=32.3
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
++..++++|++...+..+++.|.+.|+. +..+.|++.
T Consensus 395 ~~~~vLVFv~Tr~~ae~la~~L~~~g~~-v~~lHG~l~ 431 (666)
T 3o8b_A 395 RGGRHLIFCHSKKKCDELAAKLSGLGIN-AVAYYRGLD 431 (666)
T ss_dssp SSSEEEEECSCHHHHHHHHHHHHTTTCC-EEEECTTSC
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHhCCCc-EEEecCCCC
Confidence 5678999999988899999999999986 888888864
No 204
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=40.08 E-value=37 Score=24.29 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=26.5
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
.++.++++++ +|.....+.+.|++.|-.++++.
T Consensus 135 ~gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~~ 170 (221)
T 1o5o_A 135 DDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLV 170 (221)
T ss_dssp TTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEE
Confidence 4677888866 78888899999999998877644
No 205
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=40.04 E-value=27 Score=23.76 Aligned_cols=50 Identities=22% Similarity=0.219 Sum_probs=35.1
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCccceeec------cccHHHHHhCCCceec
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF------GGGHMAWVQNGLKVKA 142 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l------~gG~~~w~~~g~~~~~ 142 (153)
.++++|+++++ +|.....+++.|++.|-..|... .+|.+...+.|.|+..
T Consensus 112 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~~s 170 (180)
T 2p1z_A 112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYRY 170 (180)
T ss_dssp CTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEEE
T ss_pred CCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeEEE
Confidence 47889999977 77777888999999997765321 2345555456777653
No 206
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=40.03 E-value=34 Score=27.60 Aligned_cols=37 Identities=8% Similarity=0.054 Sum_probs=31.1
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHC---CccceeeccccH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGA---GFKHVSNFGGGH 130 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~---G~~~v~~l~gG~ 130 (153)
.++..++|+|++...+..++..|... |+. +..+.|++
T Consensus 286 ~~~~~~iVF~~t~~~~~~l~~~L~~~~~~~~~-v~~~hg~~ 325 (579)
T 3sqw_A 286 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLP-ILEFHGKI 325 (579)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHHTTTSC-EEEESTTS
T ss_pred CCCCcEEEECCcHHHHHHHHHHHHHhhcCCCc-EEEecCCC
Confidence 56789999999988888999999876 766 78888885
No 207
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=39.47 E-value=33 Score=26.59 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=29.4
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
..++++|++-..+..++..|.+.|+. +..+.|++
T Consensus 301 ~~~lVF~~t~~~a~~l~~~L~~~~~~-~~~lhg~~ 334 (434)
T 2db3_A 301 DGTIVFVETKRGADFLASFLSEKEFP-TTSIHGDR 334 (434)
T ss_dssp TTEEEECSSHHHHHHHHHHHHHTTCC-EEEESTTS
T ss_pred CCEEEEEeCcHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 34999999988899999999999987 78888885
No 208
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=39.32 E-value=73 Score=23.25 Aligned_cols=47 Identities=15% Similarity=0.312 Sum_probs=31.9
Q ss_pred HHHHHHHhh-ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 83 DFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 83 ~~~~~~~~~-~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.|...+.+. ...+++++++ +.|..+..++..|.+.|+.+++++.=..
T Consensus 106 G~~~~l~~~~~~~~~~vlvl-GaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 106 AIVKLIEKYHLNKNAKVIVH-GSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp HHHHHHHHTTCCTTSCEEEE-CSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred HHHHHHHHhCCCCCCEEEEE-CCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 445555443 3355677766 5666777788889999998888776543
No 209
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=39.01 E-value=36 Score=26.96 Aligned_cols=34 Identities=26% Similarity=0.147 Sum_probs=28.4
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeecc
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
++++|+++++ +|.....+++.|++.|-..|+.+.
T Consensus 337 ~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~ 373 (459)
T 1ao0_A 337 EGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKI 373 (459)
T ss_dssp TTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 6889999988 777788899999999988876543
No 210
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=38.94 E-value=35 Score=29.85 Aligned_cols=38 Identities=11% Similarity=0.069 Sum_probs=33.0
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
.++++++|.|.+-..+...+..|...|+. ..+|.|...
T Consensus 458 ~~gqpvLVft~Sie~sE~Ls~~L~~~Gi~-~~vLnak~~ 495 (922)
T 1nkt_A 458 AKGQPVLIGTTSVERSEYLSRQFTKRRIP-HNVLNAKYH 495 (922)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHTTCC-CEEECSSCH
T ss_pred hcCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 57889999999999999999999999998 577887753
No 211
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=38.87 E-value=54 Score=22.05 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=30.0
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCc
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGF 120 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~ 120 (153)
++.+.+.+.+.++..+++.+..........+.+.+.||
T Consensus 123 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 123 EIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp HHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 66677777678899888887665566778888999998
No 212
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=38.84 E-value=1.1e+02 Score=22.24 Aligned_cols=107 Identities=10% Similarity=0.044 Sum_probs=58.5
Q ss_pred CcceeecHHHHHHHHhCCCeEE-ecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 26 AEVITVDVRAAKNLLESGYGYL-DVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~~~~iI-DvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
.....+|......+-+.+.++. |.+-..+.....-+++ .-+.. ......+..+.+.+....++.|++.+.+
T Consensus 31 Gd~~~LT~~A~~~L~~AdvV~~~~~~~~~~ll~~~~~~~--~~~~~------~~~~~~~~~~~i~~~~~~g~~Vv~L~~G 102 (285)
T 1cbf_A 31 GDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGA--EVLKT------AGMHLEEMVGTMLDRMREGKMVVRVHTG 102 (285)
T ss_dssp SCGGGSCHHHHHHHHHCSEEEECTTTSCHHHHTTSCTTC--EEEEC------TTCCHHHHHHHHHHHHTTTCCEEEEESB
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHhcCCCC--EEEec------CCCCHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3455677766655545566665 6554444332222344 21211 1111224455555544567888888763
Q ss_pred C----ccHHHHHHHHHHCCccceeecccc--H-HHHHhCCCcee
Q 031788 105 G----ARSLHATADLLGAGFKHVSNFGGG--H-MAWVQNGLKVK 141 (153)
Q Consensus 105 g----~~a~~~~~~L~~~G~~~v~~l~gG--~-~~w~~~g~~~~ 141 (153)
. .+.....+.|.+.|++ +.++.|= + .+....|.|+.
T Consensus 103 DP~i~g~~~~l~~~l~~~gi~-veviPGiSS~~aa~a~~G~pl~ 145 (285)
T 1cbf_A 103 DPAMYGAIMEQMVLLKREGVD-IEIVPGVTSVFAAAAAAEAELT 145 (285)
T ss_dssp CTTTTCCCHHHHHHHHHTTCE-EEEECCCCHHHHHHHHTTCCSC
T ss_pred CccccccHHHHHHHHHHCCCc-EEEECCchHHHHHHHHcCCCcc
Confidence 3 2356667888888876 7788763 2 23445677753
No 213
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=38.43 E-value=16 Score=24.55 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=26.1
Q ss_pred CCCeEEEEeCCC-ccHHHHHHHHHHC----Cc-cceeeccccHHHH
Q 031788 94 EEDRLVVGCQSG-ARSLHATADLLGA----GF-KHVSNFGGGHMAW 133 (153)
Q Consensus 94 ~~~~ivi~c~~g-~~a~~~~~~L~~~----G~-~~v~~l~gG~~~w 133 (153)
+..+|+++|.+. -||+.|...|+.+ |. +++.+...|...|
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAW 48 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCC
Confidence 445799999744 3777776666543 55 3566777676665
No 214
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=38.14 E-value=56 Score=19.63 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=7.0
Q ss_pred HHHHHHCCccceeecccc
Q 031788 112 TADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 112 ~~~L~~~G~~~v~~l~gG 129 (153)
...|...||..+.....+
T Consensus 21 ~~~l~~~~~~~v~~~~~~ 38 (128)
T 1jbe_A 21 RNLLKELGFNNVEEAEDG 38 (128)
T ss_dssp HHHHHHTTCCCEEEESSH
T ss_pred HHHHHHcCCcEEEeeCCH
Confidence 333444444333333333
No 215
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=37.99 E-value=44 Score=21.66 Aligned_cols=33 Identities=12% Similarity=0.002 Sum_probs=23.8
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
++.+|+ +++.|..+..+++.|...|++ |.+++-
T Consensus 18 ~~~~v~-IiG~G~iG~~la~~L~~~g~~-V~vid~ 50 (155)
T 2g1u_A 18 KSKYIV-IFGCGRLGSLIANLASSSGHS-VVVVDK 50 (155)
T ss_dssp CCCEEE-EECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCcEE-EECCCHHHHHHHHHHHhCCCe-EEEEEC
Confidence 344454 446788889999999999984 776654
No 216
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=37.91 E-value=20 Score=21.37 Aligned_cols=26 Identities=15% Similarity=0.289 Sum_probs=21.9
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLG 117 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~ 117 (153)
+..+++|.++|.++..+....+.+.+
T Consensus 56 IAGDDTIlvi~r~~~~a~~l~~~l~~ 81 (83)
T 2p5m_A 56 ICGDDTILIICRTPEDTEGVKNRLLE 81 (83)
T ss_dssp EECSSEEEEECSSHHHHHHHHHHHHT
T ss_pred EecCCEEEEEECCHHHHHHHHHHHHH
Confidence 56789999999998888888888765
No 217
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=37.47 E-value=80 Score=22.42 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=34.2
Q ss_pred HHHHHHHhhccCCCeEEEEeCCC-----ccHHHHHHHHHHCCccceeecccc---HHHHHhCCCc
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSG-----ARSLHATADLLGAGFKHVSNFGGG---HMAWVQNGLK 139 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g-----~~a~~~~~~L~~~G~~~v~~l~gG---~~~w~~~g~~ 139 (153)
+..+.+.+....++.|++.|..| .+.....+.+.+.|++ +.++.|= ..+....|.|
T Consensus 71 ~~~~~i~~~~~~G~~Va~ls~~GdP~i~~~g~~l~~~l~~~gi~-vevIPGiSs~~aa~a~~G~p 134 (242)
T 1wyz_A 71 EDISGYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLK-VIPLVGPSSIILSVMASGFN 134 (242)
T ss_dssp HHHHHHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCC-EEECCCCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHcCCEEEEEecCCCCcccCcHHHHHHHHHHCCCC-EEEeCcHHHHHHHHHHcCCC
Confidence 44444444445688899987422 2345567778888987 7788763 2344455666
No 218
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=37.08 E-value=35 Score=23.61 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=26.2
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
.+++|+|...+|.-...+++.|.+.|++ |..+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~-V~~~~ 52 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHE-PVAMV 52 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCe-EEEEE
Confidence 4677888877888899999999999985 66553
No 219
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=36.89 E-value=47 Score=22.40 Aligned_cols=45 Identities=22% Similarity=0.257 Sum_probs=30.7
Q ss_pred HHHhhccCCCeEEEEeCCCc--cHHHHHHHHHH---CCccceeeccccHHHH
Q 031788 87 KVRSLCKEEDRLVVGCQSGA--RSLHATADLLG---AGFKHVSNFGGGHMAW 133 (153)
Q Consensus 87 ~~~~~~~~~~~ivi~c~~g~--~a~~~~~~L~~---~G~~~v~~l~gG~~~w 133 (153)
.+.+.++++ .+|+.|..|. .|..+++.|.. .| .++.++.||-.++
T Consensus 59 ~il~~i~~~-~vi~Ld~~Gk~~sS~~fA~~l~~~~~~g-~~i~FvIGG~~Gl 108 (155)
T 1ns5_A 59 QMLAAAGKN-RIVTLDIPGKPWDTPQLAAELERWKLDG-RDVSLLIGGPEGL 108 (155)
T ss_dssp HHHHHHTTS-EEEEEEEEEECCCHHHHHHHHHHHHHHC-SCEEEEECBTTBC
T ss_pred HHHHhcCCC-cEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCC
Confidence 333335555 5777777664 57888887764 48 7899999986543
No 220
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=36.82 E-value=40 Score=23.07 Aligned_cols=31 Identities=13% Similarity=-0.047 Sum_probs=25.7
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++++++++ +|.....+++.|++.|-..++
T Consensus 94 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 127 (181)
T 2ywu_A 94 HGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVR 127 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEE
Confidence 6788999876 788888899999999977654
No 221
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=36.74 E-value=77 Score=23.52 Aligned_cols=39 Identities=23% Similarity=0.257 Sum_probs=26.7
Q ss_pred HHHHHHHhh--ccCCCeEEEEeCCCccHHHHHHHHHHC----Ccc
Q 031788 83 DFLKKVRSL--CKEEDRLVVGCQSGARSLHATADLLGA----GFK 121 (153)
Q Consensus 83 ~~~~~~~~~--~~~~~~ivi~c~~g~~a~~~~~~L~~~----G~~ 121 (153)
.+.+.+.+. +.+++++++-+.+|..|..++..|.+. |++
T Consensus 10 ~~~~~i~~~~l~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~ 54 (317)
T 1wy5_A 10 KVLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLK 54 (317)
T ss_dssp HHHHHHHHHCSCSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCS
T ss_pred HHHHHHHHcCCCCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCC
Confidence 344444443 567788888888888887777777764 666
No 222
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=36.70 E-value=44 Score=23.84 Aligned_cols=30 Identities=37% Similarity=0.428 Sum_probs=24.2
Q ss_pred CeEEEEeCCC-ccHHHHHHHHHHCCccceeec
Q 031788 96 DRLVVGCQSG-ARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 96 ~~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l 126 (153)
=++.++|.+- .||..+=..|.+.||+ |.-+
T Consensus 26 Lr~avVCaSN~NRSMEAH~~L~k~Gf~-V~Sf 56 (214)
T 4h3k_B 26 LRVAVVSSSNQNRSMEAHNILSKRGFS-VRSF 56 (214)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEECCCCcchhHHHHHHHHHCCCc-eEee
Confidence 4589999966 5899999999999996 6544
No 223
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=36.67 E-value=37 Score=24.02 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=25.4
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
.++.++++++ +|.....+.+.|++.|-.+++
T Consensus 120 ~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~ 153 (208)
T 2e55_A 120 KGKIVVILDPMLATGGTLEVALREILKHSPLKVK 153 (208)
T ss_dssp BTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHHcCCCEEE
Confidence 4677888876 788888999999999988765
No 224
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=36.54 E-value=53 Score=19.05 Aligned_cols=10 Identities=20% Similarity=-0.286 Sum_probs=4.1
Q ss_pred HHHHHHHCCc
Q 031788 111 ATADLLGAGF 120 (153)
Q Consensus 111 ~~~~L~~~G~ 120 (153)
+...+....+
T Consensus 37 ~~~~l~~~~~ 46 (119)
T 2j48_A 37 ALDQLDLLQP 46 (119)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHhcCC
Confidence 3344444443
No 225
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=36.52 E-value=39 Score=24.15 Aligned_cols=31 Identities=16% Similarity=0.122 Sum_probs=26.2
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCccce
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHV 123 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v 123 (153)
.++++|+++++ +|.....+++.|++.|-..|
T Consensus 136 ~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v 169 (236)
T 1qb7_A 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVV 169 (236)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCeEE
Confidence 47899999977 78888889999999998765
No 226
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=36.42 E-value=42 Score=21.87 Aligned_cols=36 Identities=14% Similarity=0.094 Sum_probs=26.0
Q ss_pred cCCCeEEEEeCC---CccHHHHHHHHHHCCccceeecccc
Q 031788 93 KEEDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 93 ~~~~~ivi~c~~---g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
+..+.|.++..+ |.-+...++.|.+.||+ ++.+.-.
T Consensus 20 ~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~-v~~Vnp~ 58 (144)
T 2d59_A 20 TRYKKIALVGASPKPERDANIVMKYLLEHGYD-VYPVNPK 58 (144)
T ss_dssp HHCCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEECTT
T ss_pred cCCCEEEEEccCCCCCchHHHHHHHHHHCCCE-EEEECCC
Confidence 336778888665 44567888899999995 8776544
No 227
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=36.39 E-value=40 Score=22.80 Aligned_cols=48 Identities=17% Similarity=0.222 Sum_probs=34.3
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee---ecc---ccHHHHHhCCCcee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS---NFG---GGHMAWVQNGLKVK 141 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~---~l~---gG~~~w~~~g~~~~ 141 (153)
++++|+++++ +|.....+++.|++.|-..+. .++ +|.+...+.|.|+.
T Consensus 105 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~~ 161 (178)
T 2yzk_A 105 PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRLV 161 (178)
T ss_dssp CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEE
T ss_pred CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcEE
Confidence 7899999977 777788899999999976542 332 34555555676654
No 228
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=36.36 E-value=19 Score=24.30 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=24.4
Q ss_pred CeEEEEeCCC-ccHHHHHHHHHH----CCccceeeccccHHHH
Q 031788 96 DRLVVGCQSG-ARSLHATADLLG----AGFKHVSNFGGGHMAW 133 (153)
Q Consensus 96 ~~ivi~c~~g-~~a~~~~~~L~~----~G~~~v~~l~gG~~~w 133 (153)
.+|+++|.+. -||+.|...++. .|..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 4689999744 377776665543 4665566666666554
No 229
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=36.00 E-value=42 Score=22.86 Aligned_cols=32 Identities=9% Similarity=-0.035 Sum_probs=26.2
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
++++++++++ +|.....+.+.|++.|-..++.
T Consensus 90 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~ 124 (177)
T 3ohp_A 90 KGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRI 124 (177)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEE
Confidence 6789999876 7778888899999999876653
No 230
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=35.70 E-value=41 Score=23.66 Aligned_cols=32 Identities=13% Similarity=0.257 Sum_probs=20.4
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++.++|...++.-...+++.|.+.|+++|..+
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~ 36 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVIL 36 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEE
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEEEE
Confidence 45566665566666777777777777645443
No 231
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=35.12 E-value=48 Score=23.27 Aligned_cols=31 Identities=16% Similarity=-0.015 Sum_probs=25.7
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++++++++ +|.....+++.|++.|-..+.
T Consensus 115 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 148 (204)
T 3hvu_A 115 EGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVK 148 (204)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEE
Confidence 6788999876 788888899999999977654
No 232
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=35.06 E-value=82 Score=25.02 Aligned_cols=51 Identities=27% Similarity=0.323 Sum_probs=36.5
Q ss_pred ccCCCeEEEEeC---CCccHHHHHHHHHHCCcccee---ec---cccHHHHHhCCCceec
Q 031788 92 CKEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS---NF---GGGHMAWVQNGLKVKA 142 (153)
Q Consensus 92 ~~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~---~l---~gG~~~w~~~g~~~~~ 142 (153)
+.++++++++.+ +|.....+.+.|++.|..-+. ++ .||-+...+.|.|+..
T Consensus 362 ~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~~g~~~l~~~g~~v~s 421 (453)
T 3qw4_B 362 YKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDMGAKAFLNKLGYDFEA 421 (453)
T ss_dssp CCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSSSHHHHHHHTTCCEEE
T ss_pred cCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCcchHHHHHhcCCCEEE
Confidence 457899999977 788888999999999976432 11 3556666677887753
No 233
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=34.79 E-value=90 Score=20.00 Aligned_cols=45 Identities=11% Similarity=0.240 Sum_probs=26.8
Q ss_pred HHHHHHHhh---ccCCCeEEEEeCC-CccHHHHHHHHHHCCccceeeccc
Q 031788 83 DFLKKVRSL---CKEEDRLVVGCQS-GARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 83 ~~~~~~~~~---~~~~~~ivi~c~~-g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
++.+++.+. .+.++.+++.++- |..-..++..+... ..++.++.|
T Consensus 43 ~~~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~~~~-~~~v~vi~G 91 (135)
T 1pdo_A 43 TLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVD-KEHYEVIAG 91 (135)
T ss_dssp HHHHHHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHHHTT-CTTEEEEES
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHhc-cCCEEEEeC
Confidence 555555554 4556778888883 55434444444433 347888866
No 234
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=34.77 E-value=43 Score=23.69 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=25.1
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccce
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHV 123 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v 123 (153)
++++|+++++ +|.....+++.|++.|...+
T Consensus 124 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v 156 (226)
T 2ps1_A 124 ENKRILIIDDVMTAGTAINEAFEIISNAKGQVV 156 (226)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEE
T ss_pred CcCEEEEEEecccChHHHHHHHHHHHHcCCeEE
Confidence 7889999977 77778888999999997654
No 235
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=34.70 E-value=44 Score=25.43 Aligned_cols=45 Identities=18% Similarity=0.138 Sum_probs=32.7
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeecc------c-cHHHHHhCCC
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNFG------G-GHMAWVQNGL 138 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l~------g-G~~~w~~~g~ 138 (153)
+++.++++++ +|.....+++.|++.|-..|+.+. + +.+...+.+.
T Consensus 212 ~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i 266 (326)
T 3s5j_B 212 KDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACF 266 (326)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCC
T ss_pred CCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCC
Confidence 5678888866 888888999999999998876432 3 3555555543
No 236
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=34.69 E-value=66 Score=21.85 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=33.1
Q ss_pred hHHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 82 PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 82 ~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
..+.+.+.+.+.++..+++.|........+.+.+.+.||..+...
T Consensus 136 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 136 KTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp HHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeecc
Confidence 468888877778899888888654455666778888898765443
No 237
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=34.58 E-value=35 Score=22.15 Aligned_cols=35 Identities=14% Similarity=0.006 Sum_probs=22.1
Q ss_pred CeEEEEeCCC-ccHHHHHHHHHHCCccceeeccccH
Q 031788 96 DRLVVGCQSG-ARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 96 ~~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
++|+++|.+. -||+.|...|+...-.++.+...|.
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt 39 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGI 39 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEES
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcC
Confidence 3688888744 3788877777765434455555554
No 238
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=34.38 E-value=58 Score=20.64 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=19.2
Q ss_pred eEEEEeCCCccHHHHHHHHHHCCccceeeccccHHH
Q 031788 97 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMA 132 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~ 132 (153)
+|+++.+...........|.+.||+-+..-..|-++
T Consensus 10 rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eA 45 (123)
T 2lpm_A 10 RVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEA 45 (123)
T ss_dssp CEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 456665554445555666666676633333444444
No 239
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=34.29 E-value=34 Score=26.71 Aligned_cols=34 Identities=18% Similarity=-0.041 Sum_probs=29.4
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
.+.+++++|++-..+..++..|.+.|+. +..+.|
T Consensus 176 ~~~~~lVF~~s~~~a~~l~~~L~~~~~~-v~~lhg 209 (440)
T 1yks_A 176 DKRPTAWFLPSIRAANVMAASLRKAGKS-VVVLNR 209 (440)
T ss_dssp CCSCEEEECSCHHHHHHHHHHHHHTTCC-EEECCS
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHHcCCC-EEEecc
Confidence 4678999999988899999999999976 778877
No 240
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=34.23 E-value=40 Score=28.64 Aligned_cols=39 Identities=15% Similarity=0.004 Sum_probs=31.8
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
...+.+++|+|+.-.........|...|+. +..++|+..
T Consensus 569 ~~~g~kvLIFsq~~~~ld~L~~~L~~~g~~-~~~i~G~~~ 607 (800)
T 3mwy_W 569 KKDGHRVLIFSQMVRMLDILGDYLSIKGIN-FQRLDGTVP 607 (800)
T ss_dssp TTTTCCEEEEESCHHHHHHHHHHHHHHTCC-CEEESTTSC
T ss_pred hhCCCeEEEEechHHHHHHHHHHHHhCCCC-EEEEeCCCC
Confidence 567889999998776777888899999987 678888863
No 241
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=34.15 E-value=43 Score=23.66 Aligned_cols=31 Identities=3% Similarity=-0.002 Sum_probs=25.9
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++|+++++ +|.....+.+.|++.|-..|.
T Consensus 133 ~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~ 166 (225)
T 2jbh_A 133 AGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIK 166 (225)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 6789999977 777788889999999987664
No 242
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=34.10 E-value=46 Score=22.89 Aligned_cols=31 Identities=13% Similarity=0.048 Sum_probs=25.7
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++++++++ +|.....+.+.|++.|-..+.
T Consensus 93 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 126 (186)
T 3o7m_A 93 TGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALK 126 (186)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEE
Confidence 6788999876 888888899999999977654
No 243
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=34.05 E-value=66 Score=19.69 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=21.2
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 133 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w 133 (153)
+..+|+++.++..........|...||. +.....+-.++
T Consensus 14 ~~~~ilivdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~al 52 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLIQYHLNQLGAE-VTVHPSGSAFF 52 (138)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTCE-EEEESSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHcCCE-EEEeCCHHHHH
Confidence 3444555544444455556666667764 55555555444
No 244
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=34.04 E-value=8.6 Score=30.19 Aligned_cols=38 Identities=18% Similarity=0.296 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMA 132 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~ 132 (153)
...+++++|++...+..++..|...|+. +..+.|++..
T Consensus 332 ~~~~~lvF~~s~~~~~~l~~~L~~~~~~-v~~lh~~~~~ 369 (479)
T 3fmp_B 332 TIAQAMIFCHTRKTASWLAAELSKEGHQ-VALLSGEMMV 369 (479)
T ss_dssp ---------------------------------------
T ss_pred cCCceEEEeCcHHHHHHHHHHHHhCCcc-EEEecCCCCH
Confidence 4567999999998999999999999876 7888888643
No 245
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=33.96 E-value=43 Score=24.64 Aligned_cols=29 Identities=28% Similarity=0.485 Sum_probs=17.8
Q ss_pred HHHHHHHhh---ccCCCeEEEEeCCC-ccHHHH
Q 031788 83 DFLKKVRSL---CKEEDRLVVGCQSG-ARSLHA 111 (153)
Q Consensus 83 ~~~~~~~~~---~~~~~~ivi~c~~g-~~a~~~ 111 (153)
.+.+.+... ...+.+|+++|..| +|+..+
T Consensus 194 ~~l~~i~~v~~~~~~~~PivVHCsaGvGRTGtf 226 (287)
T 2b49_A 194 DFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVL 226 (287)
T ss_dssp HHHHHHHHHHHHCCTTCCEEEECSSSSHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcEEEEcCCCCcHHHHH
Confidence 444444333 34578999999966 465543
No 246
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=33.90 E-value=47 Score=26.68 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=27.7
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++++|+++++ +|.....+++.|++.|-..|++.
T Consensus 358 ~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~ 393 (504)
T 1ecf_A 358 RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLA 393 (504)
T ss_dssp TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEE
Confidence 6889999988 67778889999999998877643
No 247
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=33.63 E-value=81 Score=24.56 Aligned_cols=45 Identities=20% Similarity=0.128 Sum_probs=31.1
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeeccccH---HHHHhCCCceecCC
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFGGGH---MAWVQNGLKVKARE 144 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~---~~w~~~g~~~~~~~ 144 (153)
|++|+.|..+..+++.|.+.|++ |.+++-.- ....+.|.++..++
T Consensus 7 viIiG~Gr~G~~va~~L~~~g~~-vvvId~d~~~v~~~~~~g~~vi~GD 54 (413)
T 3l9w_A 7 VIIAGFGRFGQITGRLLLSSGVK-MVVLDHDPDHIETLRKFGMKVFYGD 54 (413)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEECCHHHHHHHHHTTCCCEESC
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHhCCCeEEEcC
Confidence 56667777888889999999876 66666543 33445677666554
No 248
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=33.57 E-value=20 Score=24.16 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=23.9
Q ss_pred CCeEEEEeCCC-ccHHHHHHHHHHC----Ccc-ceeeccccHHHH
Q 031788 95 EDRLVVGCQSG-ARSLHATADLLGA----GFK-HVSNFGGGHMAW 133 (153)
Q Consensus 95 ~~~ivi~c~~g-~~a~~~~~~L~~~----G~~-~v~~l~gG~~~w 133 (153)
..+|+++|.+. -||+.|...|+.. |.. ++.+...|..+|
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 4 PLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred CCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 35689999744 3777766655543 543 466666666554
No 249
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=33.55 E-value=41 Score=22.33 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=21.5
Q ss_pred CeEEEEeCCC-ccHHHHHHHHHHCCccceeecccc
Q 031788 96 DRLVVGCQSG-ARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 96 ~~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
++|+++|.+. -||+.|...|+.+.-+++.+...|
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAG 55 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAG 55 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEE
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecc
Confidence 4688888744 378887777777543444444444
No 250
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=33.46 E-value=61 Score=21.96 Aligned_cols=41 Identities=22% Similarity=0.154 Sum_probs=28.7
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWV 134 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~ 134 (153)
...+|+++.++..........|...||..|.....|-+++.
T Consensus 60 ~~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~~~eal~ 100 (206)
T 3mm4_A 60 RGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALR 100 (206)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESSHHHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCCHHHHHH
Confidence 34567777666556667788888899866777777766543
No 251
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=33.29 E-value=46 Score=23.70 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=26.0
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++|+++++ +|.....+.+.|++.|-..|.
T Consensus 141 ~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~ 174 (233)
T 1fsg_A 141 RDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMR 174 (233)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 6889999977 788888899999999987654
No 252
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=33.27 E-value=50 Score=25.00 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=27.1
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+++.++++++ +|.....+++.|++.|-..|+..
T Consensus 215 ~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~ 250 (319)
T 3dah_A 215 EGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAY 250 (319)
T ss_dssp CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEE
Confidence 5788999866 78888899999999999887643
No 253
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=33.04 E-value=83 Score=20.61 Aligned_cols=43 Identities=12% Similarity=0.047 Sum_probs=31.0
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++.+.+.+.. ++..+++.+..........+.|.+.||..+.+.
T Consensus 105 ~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 105 EVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp HHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEE
Confidence 4555555545 788888888766677888889999999865443
No 254
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=32.84 E-value=31 Score=23.85 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=16.3
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
|++|+.|..+..+++.|.+.|++ |.+++-
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~-v~vid~ 31 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYG-VVIINK 31 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCC-EEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCCe-EEEEEC
Confidence 34455555566666666666654 554443
No 255
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=32.62 E-value=45 Score=23.14 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=25.6
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCC-cccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAG-FKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G-~~~v~ 124 (153)
++++|+++++ +|.....+++.|++.| -..|+
T Consensus 111 ~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~ 145 (201)
T 1w30_A 111 DDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQ 145 (201)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEE
Confidence 5788999977 7777888899999999 77664
No 256
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=32.52 E-value=43 Score=23.68 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=25.2
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
.++.++++++ +|.....+.+.|++.|-.++.
T Consensus 122 ~~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~ 155 (208)
T 2ehj_A 122 DERMALIVDPMLATGGSVIATIDLLKKAGCSSIK 155 (208)
T ss_dssp GGCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHHcCCCEEE
Confidence 3567888866 788888999999999987765
No 257
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=32.50 E-value=73 Score=19.16 Aligned_cols=11 Identities=9% Similarity=-0.112 Sum_probs=4.5
Q ss_pred HHHHHHHHCCc
Q 031788 110 HATADLLGAGF 120 (153)
Q Consensus 110 ~~~~~L~~~G~ 120 (153)
.....|...||
T Consensus 22 ~l~~~L~~~g~ 32 (130)
T 3eod_A 22 LLDSWFSSLGA 32 (130)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhCCc
Confidence 33334444444
No 258
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=32.42 E-value=1.2e+02 Score=20.71 Aligned_cols=58 Identities=22% Similarity=0.319 Sum_probs=32.4
Q ss_pred HHHHHHh-CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccHHHH
Q 031788 35 AAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARSLHA 111 (153)
Q Consensus 35 ~~~~~~~-~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a~~~ 111 (153)
.+.++++ .+..++|+-+..+ .+ ...| ++...+.+. -.+.+.-|++|.+|.-...+
T Consensus 38 ~i~~~L~~~G~eV~D~G~~~~-------~~--~dYP-------------d~a~~va~~V~~g~~d~GIliCGTGiG~sIa 95 (166)
T 3s5p_A 38 FLQQRASAHGYEVMDLGTESD-------AS--VDYP-------------DFAKIGCEAVTSGRADCCILVCGTGIGISIA 95 (166)
T ss_dssp HHHHHHHHTTCEEEEEEC-----------------C-------------HHHHHHHHHHHTTSCSEEEEEESSSHHHHHH
T ss_pred HHHHHHHHCCCEEEEcCCCCC-------CC--CCHH-------------HHHHHHHHHHHcCCCcEEEEEcCCcHHHHHH
Confidence 3455554 4688999976442 12 3222 455555544 24557799999999665555
Q ss_pred HHH
Q 031788 112 TAD 114 (153)
Q Consensus 112 ~~~ 114 (153)
+..
T Consensus 96 ANK 98 (166)
T 3s5p_A 96 ANK 98 (166)
T ss_dssp HHT
T ss_pred hhc
Confidence 554
No 259
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=32.22 E-value=1.7e+02 Score=22.44 Aligned_cols=81 Identities=10% Similarity=0.217 Sum_probs=44.4
Q ss_pred HHHHHHHh----CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCCh----HHHHHHHhh--ccCCCeEEEEeC
Q 031788 34 RAAKNLLE----SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSL--CKEEDRLVVGCQ 103 (153)
Q Consensus 34 ~~~~~~~~----~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~ivi~c~ 103 (153)
+++...++ +.+.|++.+. ..|....+.+. ..++|+.. ...+.. ++.+.+... .+++..++++|.
T Consensus 50 ~~v~~~L~~~H~~~y~V~NLse-~~Yd~~~f~~~-V~~~~~pD----~~~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~ 123 (361)
T 3n0a_A 50 DDIRSFLDSRHLDHYTVYNLSP-KSYRTAKFHSR-VSECSWPI----RQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCL 123 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEECSS-SCCGGGSCGGG-EEECCCCS----SSCCCHHHHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred HHHHHHHHHhCCCeEEEEECCC-CCCChhhcCCc-EEEeecCC----CCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 55666654 3478999964 56766555433 34555532 222222 222333222 246678999999
Q ss_pred CCc-cHH-HHHHHHHHCCc
Q 031788 104 SGA-RSL-HATADLLGAGF 120 (153)
Q Consensus 104 ~g~-~a~-~~~~~L~~~G~ 120 (153)
.|. |+. .++-+|...|.
T Consensus 124 aG~GRtg~~ia~~Li~~~~ 142 (361)
T 3n0a_A 124 DGRAASSILVGAMFIFCNL 142 (361)
T ss_dssp SCTHHHHHHHHHHHHHTTS
T ss_pred CCCccHHHHHHHHHHHhcC
Confidence 664 554 55666666654
No 260
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=32.12 E-value=39 Score=23.88 Aligned_cols=31 Identities=23% Similarity=0.127 Sum_probs=25.4
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
.++.++++++ +|.....+.+.|++.|-.+++
T Consensus 122 ~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~ 155 (208)
T 1v9s_A 122 AERRAFLLDPMLATGGSASLALSLLKERGATGVK 155 (208)
T ss_dssp GGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHHcCCCEEE
Confidence 4567888876 788888999999999988765
No 261
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=32.06 E-value=23 Score=28.21 Aligned_cols=37 Identities=11% Similarity=0.198 Sum_probs=28.1
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
+..+++++|++-..+..++..|.+.|+. +..+.|++.
T Consensus 356 ~~~~~LVF~~s~~~a~~l~~~L~~~~~~-v~~~hg~~~ 392 (508)
T 3fho_A 356 TIGQSIIFCKKKDTAEEIARRMTADGHT-VACLTGNLE 392 (508)
T ss_dssp -CCCEEEBCSSTTTTTHHHHHHTTTTCC-CCEEC----
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhCCCc-EEEEeCCCC
Confidence 5678999999988899999999998876 778888764
No 262
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=31.92 E-value=18 Score=26.07 Aligned_cols=52 Identities=12% Similarity=0.195 Sum_probs=37.5
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHHH
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWV 134 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w~ 134 (153)
++.+.+.+.+.++..+++++........+...|.+.||..+..+.--...|.
T Consensus 194 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~~~~~ 245 (277)
T 1o54_A 194 NYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWESLFRPYK 245 (277)
T ss_dssp GTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECCCCCCEE
T ss_pred HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEEeeeeeE
Confidence 6667676667788889999876556677788888999987766654433343
No 263
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=31.90 E-value=45 Score=20.66 Aligned_cols=28 Identities=11% Similarity=0.042 Sum_probs=18.4
Q ss_pred EEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 100 VGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 100 i~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
++|+.|..+...++.|.+.|++ |..++-
T Consensus 8 ~IiG~G~iG~~~a~~L~~~g~~-v~~~d~ 35 (140)
T 1lss_A 8 IIAGIGRVGYTLAKSLSEKGHD-IVLIDI 35 (140)
T ss_dssp EEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred EEECCCHHHHHHHHHHHhCCCe-EEEEEC
Confidence 3445676777778888877765 665543
No 264
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=31.79 E-value=42 Score=21.91 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=25.2
Q ss_pred CCeEEEEeCC---CccHHHHHHHHHHCCccceeecccc
Q 031788 95 EDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 95 ~~~ivi~c~~---g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
.+.|.++..+ |..+...++.|.+.||+ |+.+.-.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~-v~~vnp~ 49 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYH-VIPVSPK 49 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCC-EEEECSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCE-EEEeCCc
Confidence 5667777554 45577888999999996 8877654
No 265
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=31.14 E-value=57 Score=24.24 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=25.8
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++++++++ +|.....+++.|++.|-..++
T Consensus 202 ~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~ 235 (286)
T 3lrt_A 202 NGKKLLIVDDIISTGGTIAKSSGLLREKGASKIY 235 (286)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEE
T ss_pred CcCEEEEEeccccccHHHHHHHHHHHhCCCCEEE
Confidence 5788888866 777888999999999988764
No 266
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=31.07 E-value=28 Score=24.49 Aligned_cols=51 Identities=8% Similarity=-0.026 Sum_probs=38.1
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCC--ccceeeccccHHHH
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAG--FKHVSNFGGGHMAW 133 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G--~~~v~~l~gG~~~w 133 (153)
++.+.+.+.+.++..+++++............|.+.| |.++..+.--...|
T Consensus 175 ~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~~r~~ 227 (255)
T 3mb5_A 175 RVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVLVFDQ 227 (255)
T ss_dssp GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCCCCCE
T ss_pred HHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEeeeee
Confidence 5677777767888999999877666778888999999 98877665433333
No 267
>4dfc_B Uvrabc system protein A; alpha/beta domains, DNA repair, ATP binding, DNA binding, NU excision repair, hydrolase-DNA binding protein complex; 2.80A {Escherichia coli}
Probab=30.55 E-value=44 Score=21.68 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=29.7
Q ss_pred HHHHHHHhhccCCCeEEEEeC--CC--ccHHHHHHHHHHCCccceee
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQ--SG--ARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~--~g--~~a~~~~~~L~~~G~~~v~~ 125 (153)
+..+.+.++ +.++++.+.++ .+ +.-......|++.||..+++
T Consensus 10 qivd~il~~-~egtki~iLAPvv~~rKg~~~~ll~~l~~~Gf~Rvrv 55 (126)
T 4dfc_B 10 QMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 55 (126)
T ss_dssp HHHHHTTSS-CTTCCEEEEEEEEEEEESCCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhC-CCCCEEEEEeEEEeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 555666554 77888988877 22 22367788999999987665
No 268
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=30.48 E-value=45 Score=21.43 Aligned_cols=35 Identities=14% Similarity=-0.082 Sum_probs=21.6
Q ss_pred CeEEEEeCCC-ccHHHHHHHHHHCCccceeeccccH
Q 031788 96 DRLVVGCQSG-ARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 96 ~~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
++|+++|.+. -||+.|...|+...-.++.+...|.
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt 39 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGI 39 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEES
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcC
Confidence 3588888744 3777777777765324455555554
No 269
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=30.26 E-value=41 Score=25.57 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=28.4
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCcccee-ecccc
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVS-NFGGG 129 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~-~l~gG 129 (153)
+.+++++|++-..+..++..|...|+. +. .+.|.
T Consensus 252 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~h~~ 286 (414)
T 3oiy_A 252 RDGILIFAQTEEEGKELYEYLKRFKFN-VGETWSEF 286 (414)
T ss_dssp CSSEEEEESSHHHHHHHHHHHHHTTCC-EEESSSCH
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-eehhhcCc
Confidence 578999999988889999999999987 44 66664
No 270
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=30.09 E-value=1.1e+02 Score=20.39 Aligned_cols=22 Identities=23% Similarity=0.205 Sum_probs=13.7
Q ss_pred HHHHHHHHHHCCccceeecccc
Q 031788 108 SLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 108 a~~~~~~L~~~G~~~v~~l~gG 129 (153)
.....+.|++.|.+++.++-||
T Consensus 86 ~~~~i~~L~~~g~~~i~v~vGG 107 (161)
T 2yxb_A 86 MKRLMAKLRELGADDIPVVLGG 107 (161)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeC
Confidence 3455566666666556666666
No 271
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=29.98 E-value=46 Score=24.09 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=23.1
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
.+.++|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~-V~~~ 42 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVE-VFGT 42 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCE-EEEE
Confidence 45667777777888888888888888875 5544
No 272
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=29.79 E-value=57 Score=25.27 Aligned_cols=32 Identities=13% Similarity=-0.033 Sum_probs=26.8
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccceee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
+++.++++++ +|.....+++.|++.|-..|+.
T Consensus 271 ~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 305 (379)
T 2ji4_A 271 GGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV 305 (379)
T ss_dssp TTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEE
Confidence 6788999866 7888889999999999987753
No 273
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=29.79 E-value=77 Score=18.96 Aligned_cols=6 Identities=0% Similarity=-0.213 Sum_probs=2.3
Q ss_pred HHHHHC
Q 031788 113 ADLLGA 118 (153)
Q Consensus 113 ~~L~~~ 118 (153)
..+...
T Consensus 45 ~~~~~~ 50 (129)
T 1p6q_A 45 KIMAQN 50 (129)
T ss_dssp HHHHTS
T ss_pred HHHHcC
Confidence 333333
No 274
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=29.51 E-value=86 Score=19.12 Aligned_cols=12 Identities=25% Similarity=0.221 Sum_probs=5.0
Q ss_pred HHHHHHHHCCcc
Q 031788 110 HATADLLGAGFK 121 (153)
Q Consensus 110 ~~~~~L~~~G~~ 121 (153)
.....|...||.
T Consensus 21 ~l~~~l~~~g~~ 32 (140)
T 3grc_A 21 LLNLMLEKGGFD 32 (140)
T ss_dssp HHHHHHHHTTCE
T ss_pred HHHHHHHHCCCe
Confidence 333444444443
No 275
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=29.40 E-value=8.1 Score=25.60 Aligned_cols=38 Identities=8% Similarity=-0.022 Sum_probs=21.1
Q ss_pred CeEEEEeCCC-ccHHHHHHHHHHCCccceeeccccHHHH
Q 031788 96 DRLVVGCQSG-ARSLHATADLLGAGFKHVSNFGGGHMAW 133 (153)
Q Consensus 96 ~~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l~gG~~~w 133 (153)
.+|+++|.+. -||+.+...|+...-+.+.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 4688888733 3677666666654323344444444443
No 276
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=29.38 E-value=1.1e+02 Score=22.88 Aligned_cols=46 Identities=13% Similarity=0.212 Sum_probs=30.3
Q ss_pred HHHHHHHhh-cc-CCCeEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 83 DFLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 83 ~~~~~~~~~-~~-~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
-|...+.+. ++ .++++++. +.|..+..++..|.+.|..++++..=.
T Consensus 134 Gf~~~L~~~~~~l~gk~~lVl-GAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 134 GHIRAIKESGFDMRGKTMVLL-GAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred HHHHHHHhcCCCcCCCEEEEE-CcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 344545443 22 45666666 457777888999999999888766433
No 277
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=29.30 E-value=45 Score=22.20 Aligned_cols=42 Identities=17% Similarity=0.002 Sum_probs=27.8
Q ss_pred EEEeCCCccHHHHHHHHHHC-CccceeeccccH---HHHHhCCCcee
Q 031788 99 VVGCQSGARSLHATADLLGA-GFKHVSNFGGGH---MAWVQNGLKVK 141 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~-G~~~v~~l~gG~---~~w~~~g~~~~ 141 (153)
|++|+.|..+..+++.|.+. |++ |.+++-.- ....+.|..+.
T Consensus 42 v~IiG~G~~G~~~a~~L~~~~g~~-V~vid~~~~~~~~~~~~g~~~~ 87 (183)
T 3c85_A 42 VLILGMGRIGTGAYDELRARYGKI-SLGIEIREEAAQQHRSEGRNVI 87 (183)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCSC-EEEEESCHHHHHHHHHTTCCEE
T ss_pred EEEECCCHHHHHHHHHHHhccCCe-EEEEECCHHHHHHHHHCCCCEE
Confidence 44556788888999999998 986 76665443 23444565543
No 278
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=29.24 E-value=41 Score=21.32 Aligned_cols=20 Identities=15% Similarity=0.003 Sum_probs=12.8
Q ss_pred CCeEEEEeCCCccHHHHHHH
Q 031788 95 EDRLVVGCQSGARSLHATAD 114 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~ 114 (153)
-+-.|.||..|....++++.
T Consensus 9 ~~V~I~YC~~C~w~lRa~~l 28 (108)
T 2ojl_A 9 PRIAIQYCTQCQWLLRAAWM 28 (108)
T ss_dssp CEEEEEEETTTTCHHHHHHH
T ss_pred CEEEEEECCCCCChHHHHHH
Confidence 34578999988654444443
No 279
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=29.21 E-value=15 Score=25.58 Aligned_cols=38 Identities=24% Similarity=0.277 Sum_probs=24.7
Q ss_pred CCeEEEEeCCC-ccHHHHHHHHHHC----CccceeeccccHHHH
Q 031788 95 EDRLVVGCQSG-ARSLHATADLLGA----GFKHVSNFGGGHMAW 133 (153)
Q Consensus 95 ~~~ivi~c~~g-~~a~~~~~~L~~~----G~~~v~~l~gG~~~w 133 (153)
..+|+++|.+. -||+.|...|+.+ |. ++.+...|..+|
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~ 76 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFAS 76 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCC
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCc
Confidence 45799999844 3787776666543 32 466666666555
No 280
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=29.17 E-value=54 Score=21.13 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=20.8
Q ss_pred eEEEEeCCC-ccHHHHHHHHHHCCccceeeccccH
Q 031788 97 RLVVGCQSG-ARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 97 ~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
+|+++|.+. -||+.|...|+.+.-+++.+...|.
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt 40 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGL 40 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECC
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccC
Confidence 578888643 3777777777765434455554443
No 281
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=28.96 E-value=1.1e+02 Score=22.48 Aligned_cols=46 Identities=7% Similarity=0.057 Sum_probs=30.3
Q ss_pred HHHHHHHhh-cc-CCCeEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 83 DFLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 83 ~~~~~~~~~-~~-~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
-|...+... .+ +++++++. +.|..+..++..|.+.|+.+|+++.-.
T Consensus 112 G~~~~L~~~~~~l~~k~vlvl-GaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 112 GLVQDLLAQQVLLKGATILLI-GAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp HHHHHHHHTTCCCTTCEEEEE-CCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred HHHHHHHHhCCCccCCEEEEE-CchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 344545443 22 45666666 456777788899999999878776543
No 282
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=28.91 E-value=81 Score=18.95 Aligned_cols=8 Identities=13% Similarity=-0.263 Sum_probs=3.0
Q ss_pred HHHHHCCc
Q 031788 113 ADLLGAGF 120 (153)
Q Consensus 113 ~~L~~~G~ 120 (153)
..+....+
T Consensus 44 ~~l~~~~~ 51 (132)
T 3lte_A 44 IKLSTFEP 51 (132)
T ss_dssp HHHHHTCC
T ss_pred HHHHhcCC
Confidence 33333333
No 283
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=28.72 E-value=48 Score=24.35 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=24.1
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+.++|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~ 49 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRT-VRGF 49 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCC-EEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCE-EEEE
Confidence 5667888877898999999999999986 6544
No 284
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=28.69 E-value=88 Score=19.01 Aligned_cols=35 Identities=11% Similarity=-0.037 Sum_probs=17.7
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
+..+|++++++..........|...||. |.....+
T Consensus 17 ~~~~ilivdd~~~~~~~l~~~L~~~g~~-v~~~~~~ 51 (137)
T 2pln_A 17 GSMRVLLIEKNSVLGGEIEKGLNVKGFM-ADVTESL 51 (137)
T ss_dssp TCSEEEEECSCHHHHHHHHHHHHHTTCE-EEEESCH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCcE-EEEeCCH
Confidence 3444555554444445555566666664 4444433
No 285
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=28.61 E-value=69 Score=22.78 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=24.7
Q ss_pred CCeEEEEeC---CCccHHHHHHHHHHCCc--cceee
Q 031788 95 EDRLVVGCQ---SGARSLHATADLLGAGF--KHVSN 125 (153)
Q Consensus 95 ~~~ivi~c~---~g~~a~~~~~~L~~~G~--~~v~~ 125 (153)
++.++++++ +|.....+.+.|++.|. .++.+
T Consensus 129 ~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~ 164 (217)
T 3dmp_A 129 DRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMF 164 (217)
T ss_dssp TCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEE
T ss_pred CCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEE
Confidence 567888766 88888899999999998 66653
No 286
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=28.52 E-value=47 Score=23.34 Aligned_cols=31 Identities=10% Similarity=-0.015 Sum_probs=25.0
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++++++++ +|.....+.+.|++.|-..+.
T Consensus 125 ~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~ 158 (217)
T 1z7g_A 125 TGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVK 158 (217)
T ss_dssp TTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEE
Confidence 6788999977 666777888999999987664
No 287
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=28.48 E-value=1.4e+02 Score=20.16 Aligned_cols=58 Identities=29% Similarity=0.322 Sum_probs=34.7
Q ss_pred HHHHHHHh-CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccHHH
Q 031788 34 RAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARSLH 110 (153)
Q Consensus 34 ~~~~~~~~-~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a~~ 110 (153)
+++.++++ .+..++|+-+..+ .+ ...| ++.....+. -.+.+.-|++|.+|.-...
T Consensus 28 ~~i~~~L~~~G~eV~D~G~~~~-------~~--~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG~si 85 (155)
T 1o1x_A 28 EKVKNYLLGKGIEVEDHGTYSE-------ES--VDYP-------------DYAKKVVQSILSNEADFGILLCGTGLGMSI 85 (155)
T ss_dssp HHHHHHHHHTTCEEEECCCCSS-------SC--CCHH-------------HHHHHHHHHHHTTSCSEEEEEESSSHHHHH
T ss_pred HHHHHHHHHCCCEEEEeCCCCC-------CC--CChH-------------HHHHHHHHHHHcCCCceEEEEcCCcHHHHH
Confidence 34555555 4689999976432 22 3222 455555554 2455789999999865554
Q ss_pred HHH
Q 031788 111 ATA 113 (153)
Q Consensus 111 ~~~ 113 (153)
++.
T Consensus 86 aAN 88 (155)
T 1o1x_A 86 AAN 88 (155)
T ss_dssp HHT
T ss_pred Hhh
Confidence 444
No 288
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=28.47 E-value=54 Score=20.35 Aligned_cols=32 Identities=16% Similarity=0.057 Sum_probs=22.4
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
++++++ +.|..+..+++.|...|++ |..++-.
T Consensus 7 ~~v~I~-G~G~iG~~~a~~l~~~g~~-v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVI-GLGRFGGSIVKELHRMGHE-VLAVDIN 38 (144)
T ss_dssp CSEEEE-CCSHHHHHHHHHHHHTTCC-CEEEESC
T ss_pred CcEEEE-CCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 445554 4577788889999999975 6666543
No 289
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=28.46 E-value=74 Score=22.75 Aligned_cols=24 Identities=25% Similarity=0.284 Sum_probs=18.3
Q ss_pred CCccHHHHHHHHHHCCccceeeccc
Q 031788 104 SGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 104 ~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
+|......++.|...|++ |..+.+
T Consensus 33 Sg~iG~aiA~~~~~~Ga~-V~l~~~ 56 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGAN-VTLVSG 56 (226)
T ss_dssp CSHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred ccHHHHHHHHHHHHCCCE-EEEEEC
Confidence 477888889999999987 655543
No 290
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=28.45 E-value=96 Score=18.75 Aligned_cols=32 Identities=13% Similarity=0.061 Sum_probs=14.2
Q ss_pred eEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 97 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
+|+++.++..........|...||+ +.....+
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~~-v~~~~~~ 40 (136)
T 3hdv_A 9 LVLVVDDNAVNREALILYLKSRGID-AVGADGA 40 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCC-EEEESSH
T ss_pred eEEEECCCHHHHHHHHHHHHHcCce-EEEeCCH
Confidence 3444443333344445555555554 3333333
No 291
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=28.25 E-value=1.3e+02 Score=22.02 Aligned_cols=46 Identities=13% Similarity=0.061 Sum_probs=30.3
Q ss_pred HHHHHHHhh-cc-CCCeEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 83 DFLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 83 ~~~~~~~~~-~~-~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
-|...+.+. .+ +++++++.. .|..+..++..|.+.|..++.++.-.
T Consensus 113 G~~~~l~~~~~~l~~k~vlVlG-aGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 113 GFGRGMEEGLPNAKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp HHHHHHHHHCTTCCCSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred HHHHHHHHhCcCcCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 344444433 22 456666664 57777888999999999888876544
No 292
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=28.24 E-value=48 Score=25.93 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=31.5
Q ss_pred HHhhccCCCeEEEEeCCCccHHHHHHHHHHC-CccceeeccccH
Q 031788 88 VRSLCKEEDRLVVGCQSGARSLHATADLLGA-GFKHVSNFGGGH 130 (153)
Q Consensus 88 ~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~-G~~~v~~l~gG~ 130 (153)
+.+...++++++++|+....+......|... |+. +..+.|++
T Consensus 334 l~~~~~~~~k~lvF~~~~~~~~~l~~~l~~~~~~~-~~~~~g~~ 376 (500)
T 1z63_A 334 IEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTE-VPFLYGEL 376 (500)
T ss_dssp HHHHHTTTCCEEEECSCHHHHHHHHHHHHHHHTCC-CCEEETTS
T ss_pred HHHHHccCCcEEEEEehHHHHHHHHHHHHHhhCCC-eEEEECCC
Confidence 3333567889999999877777888888874 876 77788875
No 293
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=28.17 E-value=83 Score=19.32 Aligned_cols=8 Identities=25% Similarity=0.223 Sum_probs=3.0
Q ss_pred HHHHHCCc
Q 031788 113 ADLLGAGF 120 (153)
Q Consensus 113 ~~L~~~G~ 120 (153)
..|...||
T Consensus 23 ~~L~~~g~ 30 (140)
T 3h5i_A 23 NILNKYGY 30 (140)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 33333333
No 294
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=28.09 E-value=64 Score=22.28 Aligned_cols=33 Identities=18% Similarity=0.093 Sum_probs=23.0
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
+++.++|...+|.-...+++.|.+.|++ |..+.
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~-V~~~~ 38 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAK-VVAVT 38 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEe
Confidence 3556667666777778888888888875 65543
No 295
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=28.04 E-value=45 Score=21.12 Aligned_cols=18 Identities=11% Similarity=-0.132 Sum_probs=11.6
Q ss_pred eEEEEeCCCccHHHHHHH
Q 031788 97 RLVVGCQSGARSLHATAD 114 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~ 114 (153)
-.|.||..|....++++.
T Consensus 15 V~I~YC~~C~w~lRa~~l 32 (107)
T 3dex_A 15 VQIEYCTQCRWLPRAAWL 32 (107)
T ss_dssp EEEEEETTTTCHHHHHHH
T ss_pred EEEEECCCCCChHHHHHH
Confidence 367899988654444443
No 296
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=28.01 E-value=49 Score=25.70 Aligned_cols=35 Identities=23% Similarity=0.069 Sum_probs=29.6
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
..+++++|++-..+..++..|.+.|+. +..+.|+.
T Consensus 171 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-v~~lhg~~ 205 (431)
T 2v6i_A 171 DGRTVWFVHSIKQGAEIGTCLQKAGKK-VLYLNRKT 205 (431)
T ss_dssp SSCEEEECSSHHHHHHHHHHHHHTTCC-EEEESTTT
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCCe-EEEeCCcc
Confidence 557899999988899999999999876 88888874
No 297
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=27.98 E-value=24 Score=24.74 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=36.8
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHHH
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 133 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~w 133 (153)
++.+.+.+.+.++..+++++............|.+.||..+..+.-....|
T Consensus 179 ~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~~~~ 229 (258)
T 2pwy_A 179 KVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEVGWREW 229 (258)
T ss_dssp GGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEEeeeeEe
Confidence 666777776778888999987665666778888889998776655333334
No 298
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=27.94 E-value=1.4e+02 Score=21.98 Aligned_cols=46 Identities=17% Similarity=0.060 Sum_probs=31.0
Q ss_pred HHHHHHHhh-cc-CCCeEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 83 DFLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 83 ~~~~~~~~~-~~-~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
-|...+.+. ++ .+++++++. .|..+..++..|.+.|..+++++.-.
T Consensus 108 G~~~~L~~~~~~~~~k~vlvlG-aGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 108 GFGKMLSKFRVEIKNNICVVLG-SGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHTTCCCTTSEEEEEC-SSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred HHHHHHHHcCCCccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 455555443 32 466777774 56677888899999999888776543
No 299
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=27.84 E-value=13 Score=27.94 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 131 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~ 131 (153)
+..+++++|++-..+..++..|.+.|+. +..+.|++.
T Consensus 258 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 294 (394)
T 1fuu_A 258 SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 294 (394)
T ss_dssp --------------------------------------
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCe-EEEeeCCCC
Confidence 4567999999888888999999998876 777888764
No 300
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=27.77 E-value=55 Score=23.34 Aligned_cols=59 Identities=14% Similarity=0.248 Sum_probs=32.1
Q ss_pred hhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeecccc----H
Q 031788 55 FKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG----H 130 (153)
Q Consensus 55 ~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG----~ 130 (153)
...|||.+. -.+|... . -.+++++++ +.|..+.+.++.|.+.|.+ |.++..- +
T Consensus 12 ~~~~~~~~~--~~~Pifl-----------------~--L~gk~VLVV-GgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l 68 (223)
T 3dfz_A 12 HSSGHIEGR--HMYTVML-----------------D--LKGRSVLVV-GGGTIATRRIKGFLQEGAA-ITVVAPTVSAEI 68 (223)
T ss_dssp ------------CCEEEE-----------------C--CTTCCEEEE-CCSHHHHHHHHHHGGGCCC-EEEECSSCCHHH
T ss_pred cccCccccc--CccccEE-----------------E--cCCCEEEEE-CCCHHHHHHHHHHHHCCCE-EEEECCCCCHHH
Confidence 346899877 7777740 0 146777777 5677788888999999975 7766543 4
Q ss_pred HHHHhC
Q 031788 131 MAWVQN 136 (153)
Q Consensus 131 ~~w~~~ 136 (153)
..|.+.
T Consensus 69 ~~l~~~ 74 (223)
T 3dfz_A 69 NEWEAK 74 (223)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 455554
No 301
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=27.66 E-value=63 Score=24.10 Aligned_cols=47 Identities=11% Similarity=-0.007 Sum_probs=30.5
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCcc---ceeecccc
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFK---HVSNFGGG 129 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~---~v~~l~gG 129 (153)
++...+.++...+..+|++|..+..+..+.+.+++.|+. .+++..++
T Consensus 203 d~~~~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~ 252 (384)
T 3qek_A 203 NLTALLLEAKELEARVIILSASEDDATAVYKSAAMLDMTGAGYVWLVGER 252 (384)
T ss_dssp CCHHHHHHHHTSSCCEEEEECCHHHHHHHHHHHHHTTCSSTTCEEECCSG
T ss_pred hHHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHcCCccCCeEEEEecc
Confidence 455555554334555666666666778888888999987 45555554
No 302
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=27.63 E-value=90 Score=18.67 Aligned_cols=10 Identities=20% Similarity=-0.147 Sum_probs=4.3
Q ss_pred HHHHHHHCCc
Q 031788 111 ATADLLGAGF 120 (153)
Q Consensus 111 ~~~~L~~~G~ 120 (153)
+...+....+
T Consensus 38 al~~l~~~~~ 47 (122)
T 3gl9_A 38 ALEKLSEFTP 47 (122)
T ss_dssp HHHHHTTBCC
T ss_pred HHHHHHhcCC
Confidence 3444444443
No 303
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=27.33 E-value=1.4e+02 Score=21.68 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=32.3
Q ss_pred HHHHHHHhh-cc-CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 83 DFLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 83 ~~~~~~~~~-~~-~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
-|...+.+. ++ +++++++. ..|..+..++..|.+.|..+++++.-..
T Consensus 111 Gf~~~L~~~g~~~~~~~~lil-GaGGaarai~~aL~~~g~~~i~i~nRt~ 159 (269)
T 3tum_A 111 GFLGAAHKHGFEPAGKRALVI-GCGGVGSAIAYALAEAGIASITLCDPST 159 (269)
T ss_dssp HHHHHHHHTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred HHHHHHHHhCCCcccCeEEEE-ecHHHHHHHHHHHHHhCCCeEEEeCCCH
Confidence 455555554 33 45666666 5677777888899999999888876443
No 304
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=27.29 E-value=82 Score=19.77 Aligned_cols=38 Identities=16% Similarity=0.082 Sum_probs=26.1
Q ss_pred HHHHHHHhhccCCCeEEEEeC------CCccHHHHHHHHHHCCcc
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQ------SGARSLHATADLLGAGFK 121 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~------~g~~a~~~~~~L~~~G~~ 121 (153)
+..+.+.+++ ...+|++|.. .|..+.++-+.|.+.|++
T Consensus 4 ~~~~~v~~~i-~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~ 47 (121)
T 3gx8_A 4 EIRKAIEDAI-ESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVD 47 (121)
T ss_dssp HHHHHHHHHH-HSCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHh-ccCCEEEEEeccCCCCCCccHHHHHHHHHHcCCC
Confidence 3444455443 3556788866 477888888899988876
No 305
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=27.23 E-value=1.2e+02 Score=22.63 Aligned_cols=45 Identities=11% Similarity=0.240 Sum_probs=29.7
Q ss_pred HHHHHHHhh-cc-CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 83 DFLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 83 ~~~~~~~~~-~~-~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
-|...+.+. ++ +++++++.. .|..+..++..|.+.|..+|++..-
T Consensus 140 Gf~~~L~~~~~~l~gk~~lVlG-aGG~g~aia~~L~~~Ga~~V~i~nR 186 (315)
T 3tnl_A 140 GYMRALKEAGHDIIGKKMTICG-AGGAATAICIQAALDGVKEISIFNR 186 (315)
T ss_dssp HHHHHHHHTTCCCTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHHcCCCccCCEEEEEC-CChHHHHHHHHHHHCCCCEEEEEEC
Confidence 455555443 23 456666664 5677788889999999977876543
No 306
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=27.12 E-value=94 Score=18.47 Aligned_cols=12 Identities=8% Similarity=-0.205 Sum_probs=5.5
Q ss_pred HHHHHHHHCCcc
Q 031788 110 HATADLLGAGFK 121 (153)
Q Consensus 110 ~~~~~L~~~G~~ 121 (153)
.+...+....++
T Consensus 37 ~al~~~~~~~~d 48 (120)
T 3f6p_A 37 EAVEMVEELQPD 48 (120)
T ss_dssp HHHHHHHTTCCS
T ss_pred HHHHHHhhCCCC
Confidence 344445544443
No 307
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=27.04 E-value=59 Score=22.26 Aligned_cols=26 Identities=8% Similarity=0.098 Sum_probs=16.9
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLG 117 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~ 117 (153)
+..|++|+++|.++..+..+.+.|.+
T Consensus 143 IAGDDTIlVi~r~~~~a~~l~~~l~~ 168 (170)
T 3lap_A 143 IAGDDTILVVAREPTTGAQLAGMFEN 168 (170)
T ss_dssp EECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred EecCCEEEEEeCCHHHHHHHHHHHHh
Confidence 45666777777766666666666554
No 308
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=26.98 E-value=64 Score=23.42 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=21.7
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+++|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~ 33 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYE-VYGA 33 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEE
Confidence 456666666777777888888888865 5544
No 309
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=26.92 E-value=77 Score=20.41 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=10.4
Q ss_pred HHHHHHHHCCccceeecccc
Q 031788 110 HATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 110 ~~~~~L~~~G~~~v~~l~gG 129 (153)
...+.|++.|.+++.++-||
T Consensus 73 ~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 73 GLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp THHHHHHHTTCTTCEEEEEE
T ss_pred HHHHHHHhcCCCCCEEEEEC
Confidence 34445555555445555555
No 310
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=26.82 E-value=1e+02 Score=18.85 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=26.4
Q ss_pred HHHHHHHhhccCCCeEEEEeC-CCccHHHHHHHHHHCCcc
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQ-SGARSLHATADLLGAGFK 121 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~-~g~~a~~~~~~L~~~G~~ 121 (153)
+..+.+.+.+ .+.+|++|.. .|..+.++...|.+.|.+
T Consensus 5 ~~~~~~~~~i-~~~~v~vy~~~~Cp~C~~ak~~L~~~~i~ 43 (114)
T 3h8q_A 5 ELRRHLVGLI-ERSRVVIFSKSYCPHSTRVKELFSSLGVE 43 (114)
T ss_dssp HHHHHHHHHH-HHCSEEEEECTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHh-ccCCEEEEEcCCCCcHHHHHHHHHHcCCC
Confidence 4444555554 3456777766 677888889999999875
No 311
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=26.79 E-value=99 Score=18.82 Aligned_cols=9 Identities=44% Similarity=0.553 Sum_probs=3.4
Q ss_pred HHHHHHCCc
Q 031788 112 TADLLGAGF 120 (153)
Q Consensus 112 ~~~L~~~G~ 120 (153)
...|...||
T Consensus 24 ~~~L~~~g~ 32 (142)
T 3cg4_A 24 KTILSDAGF 32 (142)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHCCe
Confidence 333333343
No 312
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=26.68 E-value=1.7e+02 Score=20.52 Aligned_cols=108 Identities=14% Similarity=0.049 Sum_probs=56.1
Q ss_pred CcceeecHHHHHHHHhCCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCC
Q 031788 26 AEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 105 (153)
Q Consensus 26 ~~~~~i~~~~~~~~~~~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g 105 (153)
.....+|......+-+.+.++.|.+...+... +++ + -.++...-.. .....++..+.+.+....++.|++.+.+.
T Consensus 11 G~~~~LT~~A~~~L~~advI~~~~~~~~~~l~-~~~-~--~~i~~~~~~~-~~~~~~~~~~~i~~~~~~g~~V~~l~~GD 85 (239)
T 1va0_A 11 GDPELLTLKAYRLLKEAPVVLYDRLVDERVLA-LAP-G--EKVYVGKEEG-ESEKQEEIHRLLLRHARAHPFVVRLKGGD 85 (239)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TCC-S--EEEECCCCC-----CHHHHHHHHHHHHHTSSEEEEEESBC
T ss_pred CCHHHHHHHHHHHHHhCCEEEEcCCCCHHHHh-hcc-c--cEEecccccc-cccCHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 34556777766555556777788776554432 233 3 1122110000 01111234444444445678888886633
Q ss_pred ----ccHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 031788 106 ----ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 140 (153)
Q Consensus 106 ----~~a~~~~~~L~~~G~~~v~~l~gG~~~w~~~g~~~ 140 (153)
.......+.|.+.|++ +.++.| ..+....|.|+
T Consensus 86 P~i~~~~~~l~~~l~~~gi~-v~viPG-iSs~~aag~pl 122 (239)
T 1va0_A 86 PMVFGRGGEEVLFLLRHGVP-VEVVPG-VTSLLASGLPL 122 (239)
T ss_dssp TTSSSSHHHHHHHHHHTTCC-EEEECC-CCGGGTTCCCS
T ss_pred CccccCHHHHHHHHHHCCCc-EEEECC-cchHhhcCCCc
Confidence 2356677788888876 777765 33322226665
No 313
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=26.58 E-value=1.2e+02 Score=26.08 Aligned_cols=56 Identities=11% Similarity=0.033 Sum_probs=39.0
Q ss_pred hHHHHHHHhhccCCCeEEEEeCCC--c--cHHHHHHHHHHCCccceeecccc------HHHHHhCCCce
Q 031788 82 PDFLKKVRSLCKEEDRLVVGCQSG--A--RSLHATADLLGAGFKHVSNFGGG------HMAWVQNGLKV 140 (153)
Q Consensus 82 ~~~~~~~~~~~~~~~~ivi~c~~g--~--~a~~~~~~L~~~G~~~v~~l~gG------~~~w~~~g~~~ 140 (153)
+++.+...+ .+-.+|.+|..- . ....+.+.|++.|..++.++.|| +..+.+.|..-
T Consensus 645 eeiv~aA~e---~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG~~P~~d~~~l~~~GaD~ 710 (762)
T 2xij_A 645 REVAQQAVD---ADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVSN 710 (762)
T ss_dssp HHHHHHHHH---TTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHHTCCE
T ss_pred HHHHHHHHH---cCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCcccHHHHHhCCCCE
Confidence 466666554 466788998832 2 34678889999999889999998 33455666543
No 314
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=26.47 E-value=84 Score=22.12 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=24.6
Q ss_pred CCeEEEEeCCC-ccHHHHHHHHHHCCccceeec
Q 031788 95 EDRLVVGCQSG-ARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 95 ~~~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l 126 (153)
.-++.++|.+- .||..+=..|.+.||+ |.-+
T Consensus 9 ~l~~avVCaSN~NRSMEaH~~L~k~G~~-V~Sf 40 (198)
T 3p9y_A 9 KLAVAVVDSSNMNRSMEAHNFLAKKGFN-VRSY 40 (198)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHTTCE-EEEE
T ss_pred CceEEEEcCCCCcccHHHHHHHHhCCCc-eeec
Confidence 45789999965 5899999999999996 5543
No 315
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=26.16 E-value=72 Score=22.88 Aligned_cols=29 Identities=10% Similarity=0.037 Sum_probs=24.4
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccc
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKH 122 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~ 122 (153)
++++|+++.+ +|.....+++.|++.|..-
T Consensus 135 ~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~v 166 (232)
T 3mjd_A 135 TNKKVLLIDDVMTAGTAFYESYNKLKIINAKI 166 (232)
T ss_dssp TTCEEEEECSCCSSSHHHHHHHHHHHTTTCEE
T ss_pred CCCEEEEEEeeccccHHHHHHHHHHHHCCCEE
Confidence 6889999987 7777788899999999764
No 316
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=26.15 E-value=1e+02 Score=18.97 Aligned_cols=38 Identities=11% Similarity=0.022 Sum_probs=26.1
Q ss_pred HHHHHHHhhccCCCeEEEEe------CCCccHHHHHHHHHHCCcc
Q 031788 83 DFLKKVRSLCKEEDRLVVGC------QSGARSLHATADLLGAGFK 121 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c------~~g~~a~~~~~~L~~~G~~ 121 (153)
+..+.+.+++ ...+|++|. ..|..+.++-+.|.+.|++
T Consensus 4 ~~~~~v~~~i-~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~ 47 (111)
T 3zyw_A 4 DLNLRLKKLT-HAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQ 47 (111)
T ss_dssp CHHHHHHHHH-TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHH-hcCCEEEEEecCCCCCcchhHHHHHHHHHHcCCC
Confidence 3444555554 456777876 4666788888999999875
No 317
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=26.09 E-value=51 Score=23.50 Aligned_cols=29 Identities=17% Similarity=0.268 Sum_probs=23.5
Q ss_pred EEEEeCCCccHHHHHHHHHHCCcc--ceeec
Q 031788 98 LVVGCQSGARSLHATADLLGAGFK--HVSNF 126 (153)
Q Consensus 98 ivi~c~~g~~a~~~~~~L~~~G~~--~v~~l 126 (153)
++++|.+...+..+.+.|++.|+. ++.++
T Consensus 199 ~~i~~~nD~~A~g~~~al~~~g~~v~di~vv 229 (306)
T 8abp_A 199 WLIVGMNDSTVLGGVRATEGQGFKAADIIGI 229 (306)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCCCCceEEE
Confidence 468898888888899999999985 66554
No 318
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=26.09 E-value=95 Score=18.53 Aligned_cols=34 Identities=9% Similarity=-0.019 Sum_probs=22.8
Q ss_pred CeEEEEeC-CCccHHHHHHHHHHCCccc-eeecccc
Q 031788 96 DRLVVGCQ-SGARSLHATADLLGAGFKH-VSNFGGG 129 (153)
Q Consensus 96 ~~ivi~c~-~g~~a~~~~~~L~~~G~~~-v~~l~gG 129 (153)
..|++|.. .|.-..++-+.|.+.|++- ...++..
T Consensus 4 a~I~vYs~~~Cp~C~~aK~~L~~~gi~y~~idi~~d 39 (92)
T 2lqo_A 4 AALTIYTTSWCGYCLRLKTALTANRIAYDEVDIEHN 39 (92)
T ss_dssp SCEEEEECTTCSSHHHHHHHHHHTTCCCEEEETTTC
T ss_pred CcEEEEcCCCCHhHHHHHHHHHhcCCceEEEEcCCC
Confidence 45788876 6667778888888888763 2344443
No 319
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=26.02 E-value=82 Score=20.78 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=22.7
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++|+|...+|.-...+++.|.+.|++ |..+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~-V~~~ 33 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYE-VTVL 33 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCe-EEEE
Confidence 56777777888888888888888865 5544
No 320
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=26.01 E-value=97 Score=22.64 Aligned_cols=32 Identities=13% Similarity=0.064 Sum_probs=26.5
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
..++|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~ 55 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQV-VIGL 55 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCE-EEEE
Confidence 5678888888999999999999999976 6554
No 321
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=25.89 E-value=1.5e+02 Score=19.78 Aligned_cols=58 Identities=29% Similarity=0.401 Sum_probs=35.2
Q ss_pred HHHHHHh-CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccHHHH
Q 031788 35 AAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARSLHA 111 (153)
Q Consensus 35 ~~~~~~~-~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a~~~ 111 (153)
.+.++++ .+..++|+-+..+ .+ ...| ++...+.+. -.+.+.-|++|.+|.-...+
T Consensus 17 ~i~~~L~~~G~eV~D~G~~~~-------~~--~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG~sia 74 (149)
T 3he8_A 17 EIADFLKKRGYEVIDFGTHGN-------ES--VDYP-------------DFGLKVAEAVKSGECDRGIVICGTGLGISIA 74 (149)
T ss_dssp HHHHHHHHTTCEEEECCCCSS-------SC--CCHH-------------HHHHHHHHHHHTTSSSEEEEEESSSHHHHHH
T ss_pred HHHHHHHHCCCEEEEcCCCCC-------CC--CCHH-------------HHHHHHHHHHHcCCCCEEEEEcCCcHHHHHH
Confidence 4555554 4688999987432 22 3222 455555554 23557799999999665555
Q ss_pred HHH
Q 031788 112 TAD 114 (153)
Q Consensus 112 ~~~ 114 (153)
+..
T Consensus 75 ANK 77 (149)
T 3he8_A 75 ANK 77 (149)
T ss_dssp HHT
T ss_pred hhc
Confidence 554
No 322
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=25.73 E-value=1.5e+02 Score=19.76 Aligned_cols=59 Identities=17% Similarity=0.228 Sum_probs=36.1
Q ss_pred HHHHHHh-CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCccHHHHHH
Q 031788 35 AAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATA 113 (153)
Q Consensus 35 ~~~~~~~-~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~ 113 (153)
.+.++++ .+..++|+-+..+ + .+ ...| ++.....+.+.+.+.-|++|.+|.-...++.
T Consensus 24 ~i~~~L~~~G~eV~D~G~~~~-~-----~~--~dYp-------------d~a~~va~~V~~~d~GIliCGTGiG~siaAN 82 (148)
T 4em8_A 24 FLSAYLRDLGCEVFDCGCDPK-E-----HS--VDYP-------------DYVHDVVREVSDTSFGVLICGTGIGMSIAAN 82 (148)
T ss_dssp HHHHHHHHTTCEEEECCCCTT-C-----SC--CCGG-------------GGTHHHHTTCBTTBEEEEEESSSHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEeCCCCC-C-----CC--CChH-------------HHHHHHHHHHHHhCeEEEEccCcHHHHHHHh
Confidence 4555554 4688999987432 1 03 3322 4555555553467788999999866555554
Q ss_pred H
Q 031788 114 D 114 (153)
Q Consensus 114 ~ 114 (153)
.
T Consensus 83 K 83 (148)
T 4em8_A 83 R 83 (148)
T ss_dssp T
T ss_pred c
Confidence 3
No 323
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=25.61 E-value=58 Score=25.50 Aligned_cols=34 Identities=21% Similarity=-0.010 Sum_probs=28.7
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
...+++++|++...+..++..|...|+. +..+.|
T Consensus 189 ~~~~~LVF~~s~~~~~~l~~~L~~~g~~-v~~lh~ 222 (459)
T 2z83_A 189 YAGKTVWFVASVKMGNEIAMCLQRAGKK-VIQLNR 222 (459)
T ss_dssp CCSCEEEECSCHHHHHHHHHHHHHTTCC-EEEEST
T ss_pred cCCCEEEEeCChHHHHHHHHHHHhcCCc-EEecCH
Confidence 3678999999988899999999999986 667766
No 324
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=25.58 E-value=1.1e+02 Score=18.61 Aligned_cols=11 Identities=9% Similarity=-0.133 Sum_probs=4.7
Q ss_pred HHHHHHHCCcc
Q 031788 111 ATADLLGAGFK 121 (153)
Q Consensus 111 ~~~~L~~~G~~ 121 (153)
+...+....++
T Consensus 40 al~~~~~~~~d 50 (136)
T 3t6k_A 40 ALQQIYKNLPD 50 (136)
T ss_dssp HHHHHHHSCCS
T ss_pred HHHHHHhCCCC
Confidence 34444444443
No 325
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=25.51 E-value=96 Score=19.96 Aligned_cols=36 Identities=25% Similarity=0.232 Sum_probs=25.7
Q ss_pred cCCCeEEEEeCC---CccHHHHHHHHHHCCccceeecccc
Q 031788 93 KEEDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 93 ~~~~~ivi~c~~---g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
...++|.++..+ |..+...++.|.+.||+ |+.+.-.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~-V~~vnp~ 50 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFE-VLPVNPN 50 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEECTT
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCE-EEEeCCC
Confidence 356778888654 45577888999999996 8877654
No 326
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=25.51 E-value=77 Score=22.68 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=25.6
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
.++|+|...+|.-+..+++.|.+.|++ |..+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~ 38 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEE-VTVLD 38 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCE-EEEEe
Confidence 567777777888899999999999986 66553
No 327
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=25.42 E-value=1.4e+02 Score=19.49 Aligned_cols=46 Identities=11% Similarity=0.172 Sum_probs=26.9
Q ss_pred HHHHHHHhh---ccCCCeEEEEeC-CCccHHHHHHHHHHC-C---ccceeeccc
Q 031788 83 DFLKKVRSL---CKEEDRLVVGCQ-SGARSLHATADLLGA-G---FKHVSNFGG 128 (153)
Q Consensus 83 ~~~~~~~~~---~~~~~~ivi~c~-~g~~a~~~~~~L~~~-G---~~~v~~l~g 128 (153)
++.+++.+. .+.++.+++.|+ -|+.....+..+... + ..++.++.|
T Consensus 43 ~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~~~~~~~~~~~~v~vI~G 96 (150)
T 3ipr_A 43 ALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVINELEPALQKKIFVVSG 96 (150)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHHHTTSCHHHHTTEEEEES
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHhhhhccCCCEEEEeC
Confidence 455554443 466777888888 455545555555433 1 246777776
No 328
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=25.41 E-value=76 Score=22.83 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=21.9
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceee
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
++|+|...+|.-+..+++.|.+.|++ |..
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~-V~~ 30 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYS-VNT 30 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCE-EEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCE-EEE
Confidence 56677766888888888888888876 553
No 329
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=25.41 E-value=46 Score=25.12 Aligned_cols=43 Identities=30% Similarity=0.349 Sum_probs=33.1
Q ss_pred ChHHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 81 NPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
.+++.+.+.+...++..++.||.. ..+-+.|.+.||. |.-..|
T Consensus 205 s~e~f~~l~~~~~pgg~laTYtaa----g~VRR~L~~aGF~-V~k~~G 247 (308)
T 3vyw_A 205 TLDFLSLIKERIDEKGYWVSYSSS----LSVRKSLLTLGFK-VGSSRE 247 (308)
T ss_dssp SHHHHHHHHTTEEEEEEEEESCCC----HHHHHHHHHTTCE-EEEEEC
T ss_pred CHHHHHHHHHHhCCCcEEEEEeCc----HHHHHHHHHCCCE-EEecCC
Confidence 347778888877889999999965 3455779999998 766665
No 330
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=25.40 E-value=70 Score=23.93 Aligned_cols=18 Identities=22% Similarity=0.501 Sum_probs=13.5
Q ss_pred cCCCeEEEEeCCC-ccHHH
Q 031788 93 KEEDRLVVGCQSG-ARSLH 110 (153)
Q Consensus 93 ~~~~~ivi~c~~g-~~a~~ 110 (153)
....+|+++|..| +|+..
T Consensus 237 ~~~~PivVHCsaGvGRTGt 255 (315)
T 1wch_A 237 HRSGPIITHCSAGIGRSGT 255 (315)
T ss_dssp CCSSCEEEECSSSSHHHHH
T ss_pred CCCCCEEEEcCCCCcHHHH
Confidence 5678999999966 46543
No 331
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=24.96 E-value=1.6e+02 Score=19.67 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=35.9
Q ss_pred HHHHHHHh-CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccHHH
Q 031788 34 RAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARSLH 110 (153)
Q Consensus 34 ~~~~~~~~-~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a~~ 110 (153)
+.+.++++ .+..++|+-+..+ .+ ...| ++.....+. -.+.+.-|++|.+|.-...
T Consensus 17 ~~i~~~L~~~G~eV~D~G~~~~-------~~--~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG~si 74 (149)
T 2vvr_A 17 HEIVAHLVERGVEVIDKGTWSS-------ER--TDYP-------------HYASQVALAVAGGEVDGGILICGTGVGISI 74 (149)
T ss_dssp HHHHHHHHHTTCEEEECCCCSS-------SC--CCHH-------------HHHHHHHHHHHTTSSSEEEEEESSSHHHHH
T ss_pred HHHHHHHHHCCCEEEEeCCCCC-------CC--CChH-------------HHHHHHHHHHHcCCCceEEEEeCCcHHHHH
Confidence 34566665 4689999976322 13 3222 455555554 2355789999999966566
Q ss_pred HHHH
Q 031788 111 ATAD 114 (153)
Q Consensus 111 ~~~~ 114 (153)
++..
T Consensus 75 aANK 78 (149)
T 2vvr_A 75 AANK 78 (149)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 5554
No 332
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.96 E-value=63 Score=23.47 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=23.7
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
.+.++|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~ 44 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYR-VHGL 44 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCe-EEEE
Confidence 35677888877888888888888888875 5544
No 333
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=24.91 E-value=57 Score=24.78 Aligned_cols=46 Identities=11% Similarity=0.003 Sum_probs=31.0
Q ss_pred HHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccc---eeecccc
Q 031788 84 FLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKH---VSNFGGG 129 (153)
Q Consensus 84 ~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~---v~~l~gG 129 (153)
+...+.++...+-.+|++|..+..+..+...+++.|+.. +++..++
T Consensus 195 ~~~~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~ 243 (433)
T 4f11_A 195 PCTSVKKLKGNDVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIPGW 243 (433)
T ss_dssp CHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTCCSTTCEEEEESC
T ss_pred HHHHHHHHhhCCCeEEEEeCcHHHHHHHHHHHHHcCCCCCCeEEEEcCc
Confidence 334444443345567777777777788889999999875 6666665
No 334
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=24.87 E-value=92 Score=19.57 Aligned_cols=23 Identities=17% Similarity=0.238 Sum_probs=9.3
Q ss_pred EEEEeCCCccHHHHHHHHHHCCc
Q 031788 98 LVVGCQSGARSLHATADLLGAGF 120 (153)
Q Consensus 98 ivi~c~~g~~a~~~~~~L~~~G~ 120 (153)
|+++.++..........|...||
T Consensus 10 ILivdd~~~~~~~l~~~L~~~g~ 32 (154)
T 3gt7_A 10 ILIVEDSPTQAEHLKHILEETGY 32 (154)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHCCC
Confidence 33433333333344444444444
No 335
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=24.85 E-value=1.4e+02 Score=21.64 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=26.3
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.++++++. +.|..+..++..|.+.|+.+|+++.-..
T Consensus 119 ~~k~~lvl-GaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLL-GAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEE-CCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEE-CccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45666666 4567778889999999998887765443
No 336
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=24.79 E-value=75 Score=22.06 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=20.0
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++.++|...++.-...+++.|.+.|++ |..+
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~-V~~~ 41 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGAR-LILI 41 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEE
Confidence 455666655666677777777777765 5444
No 337
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=24.78 E-value=84 Score=21.67 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=22.3
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
+++.++|...++.-...+++.|.+.|++ |..+.
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~~ 38 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVS 38 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCE-EEEEe
Confidence 3556666666777777778888888875 55443
No 338
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=24.75 E-value=86 Score=24.18 Aligned_cols=30 Identities=20% Similarity=0.120 Sum_probs=23.2
Q ss_pred ccCCCeEEEEeCCCcc-------HHHHHHHHHHCCcc
Q 031788 92 CKEEDRLVVGCQSGAR-------SLHATADLLGAGFK 121 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~-------a~~~~~~L~~~G~~ 121 (153)
+.++++|-+++.++.. -.++.++|++.||+
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~ 76 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFK 76 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCE
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCE
Confidence 5688999999986642 34667789999987
No 339
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=24.75 E-value=73 Score=24.14 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=25.1
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
-++++|.|+ ++|..+..+++.++++|++ |..++
T Consensus 12 ~~~k~IlIl-G~G~~g~~la~aa~~~G~~-vi~~d 44 (389)
T 3q2o_A 12 LPGKTIGII-GGGQLGRMMALAAKEMGYK-IAVLD 44 (389)
T ss_dssp CTTSEEEEE-CCSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCCEEEEE-CCCHHHHHHHHHHHHcCCE-EEEEe
Confidence 356777776 5677888999999999997 55554
No 340
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=24.59 E-value=95 Score=18.49 Aligned_cols=13 Identities=15% Similarity=0.266 Sum_probs=6.3
Q ss_pred HHHHHHHHHCCcc
Q 031788 109 LHATADLLGAGFK 121 (153)
Q Consensus 109 ~~~~~~L~~~G~~ 121 (153)
..+.+.+....++
T Consensus 37 ~~a~~~l~~~~~d 49 (127)
T 3i42_A 37 TDALHAMSTRGYD 49 (127)
T ss_dssp HHHHHHHHHSCCS
T ss_pred HHHHHHHHhcCCC
Confidence 3444555555544
No 341
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=24.55 E-value=74 Score=20.89 Aligned_cols=44 Identities=14% Similarity=0.245 Sum_probs=26.8
Q ss_pred HHHHHHHhh---c-cCCCeEEEEeC-CCccHHHHHHHHHHCCccceeeccc
Q 031788 83 DFLKKVRSL---C-KEEDRLVVGCQ-SGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 83 ~~~~~~~~~---~-~~~~~ivi~c~-~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
++.+++.+. + +.++.+++.|+ -|..-..++..+.+ ..++.++.|
T Consensus 45 ~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l~~--~~~v~vItG 93 (144)
T 3lfh_A 45 VVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSMMK--EYDVKVITG 93 (144)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHHHH--HHCCEEEES
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHHhc--CCCEEEEeC
Confidence 566655554 4 66788999998 44444445555533 245777766
No 342
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=24.46 E-value=23 Score=23.75 Aligned_cols=39 Identities=15% Similarity=-0.009 Sum_probs=24.4
Q ss_pred CCeEEEEeCCC-ccHHHHHHHHHH----CCcc-c-eeeccccHHHH
Q 031788 95 EDRLVVGCQSG-ARSLHATADLLG----AGFK-H-VSNFGGGHMAW 133 (153)
Q Consensus 95 ~~~ivi~c~~g-~~a~~~~~~L~~----~G~~-~-v~~l~gG~~~w 133 (153)
..+|+++|.+- -||+.|...|+. .|.. + +.+...|..+|
T Consensus 7 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 7 KISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC
Confidence 35699999744 377776665553 4554 3 66666666554
No 343
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=24.35 E-value=66 Score=23.06 Aligned_cols=28 Identities=25% Similarity=0.240 Sum_probs=16.5
Q ss_pred EEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 98 LVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 98 ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 3 ILVTGatGfIG~~L~~~L~~~G~~-V~~l 30 (298)
T 4b4o_A 3 VLVGGGTGFIGTALTQLLNARGHE-VTLV 30 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCE-EEEE
Confidence 444444566666666677666665 4443
No 344
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=24.32 E-value=77 Score=22.09 Aligned_cols=30 Identities=20% Similarity=0.133 Sum_probs=16.6
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceee
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
++.++|...++.-...+++.|.+.|++ |..
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~-V~~ 42 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGAR-VII 42 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE-EEE
Confidence 444555544555566666666666654 443
No 345
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=24.23 E-value=58 Score=20.48 Aligned_cols=18 Identities=11% Similarity=-0.008 Sum_probs=11.7
Q ss_pred eEEEEeCCCccHHHHHHH
Q 031788 97 RLVVGCQSGARSLHATAD 114 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~ 114 (153)
--|.||..|.-..++++.
T Consensus 6 V~I~YC~~C~w~~Ra~~l 23 (105)
T 2p0g_A 6 IEIYYCRQCNWMLRSAWL 23 (105)
T ss_dssp EEEEEETTTTCHHHHHHH
T ss_pred EEEEECCCCCChHHHHHH
Confidence 468999988654444443
No 346
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=24.22 E-value=1.7e+02 Score=19.94 Aligned_cols=58 Identities=29% Similarity=0.392 Sum_probs=34.5
Q ss_pred HHHHHHh-CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccHHHH
Q 031788 35 AAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARSLHA 111 (153)
Q Consensus 35 ~~~~~~~-~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a~~~ 111 (153)
.+.++++ .+..++|+-+..+ .+ .. |. ++...+.+. -.+.+.-|++|.+|.-...+
T Consensus 37 ~i~~~L~~~G~eV~D~G~~~~-------~~--~d--Yp-----------d~a~~va~~V~~g~~d~GIliCGTGiG~sIa 94 (169)
T 3ph3_A 37 EIADFLKKRGYEVIDFGTHGN-------ES--VD--YP-----------DFGLKVAEAVKSGECDRGIVICGTGLGISIA 94 (169)
T ss_dssp HHHHHHHHTTCEEEECCCCSS-------SC--CC--HH-----------HHHHHHHHHHHTTSSSEEEEEESSSHHHHHH
T ss_pred HHHHHHHHCCCEEEEcCCCCC-------CC--CC--HH-----------HHHHHHHHHHHcCCCCEEEEEcCCcHHHHHH
Confidence 4555554 4688999987432 12 32 31 555555554 23457799999998655555
Q ss_pred HHH
Q 031788 112 TAD 114 (153)
Q Consensus 112 ~~~ 114 (153)
+..
T Consensus 95 ANK 97 (169)
T 3ph3_A 95 ANK 97 (169)
T ss_dssp HTT
T ss_pred hhc
Confidence 543
No 347
>2wv9_A Flavivirin protease NS2B regulatory subunit, FLAV protease NS3 catalytic subunit; nucleotide-binding, capsid protein; 2.75A {Murray valley encephalitis virus}
Probab=24.09 E-value=62 Score=27.06 Aligned_cols=36 Identities=19% Similarity=0.002 Sum_probs=30.5
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
..+.+++++|++-..+..++..|...|+. +..+.|.
T Consensus 408 ~~~~~~lVF~~s~~~~e~la~~L~~~g~~-v~~lHg~ 443 (673)
T 2wv9_A 408 DYAGKTVWFVASVKMSNEIAQCLQRAGKR-VIQLNRK 443 (673)
T ss_dssp SCCSCEEEECSSHHHHHHHHHHHHTTTCC-EEEECSS
T ss_pred hCCCCEEEEECCHHHHHHHHHHHHhCCCe-EEEeChH
Confidence 35778999999988889999999999876 7788874
No 348
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=24.07 E-value=78 Score=24.43 Aligned_cols=28 Identities=21% Similarity=0.367 Sum_probs=19.9
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
++++|++-.++|.-|..++..|.+.||+
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~~G~~ 43 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQQGYQ 43 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHTTCCE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHcCCe
Confidence 4566777766777777777778877876
No 349
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=24.05 E-value=60 Score=25.34 Aligned_cols=38 Identities=13% Similarity=-0.014 Sum_probs=31.3
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccHHH
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMA 132 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~ 132 (153)
...+++++|++-..+..++..|.+.|+. +..+.|....
T Consensus 187 ~~~~~lVF~~s~~~a~~l~~~L~~~g~~-~~~lh~~~~~ 224 (451)
T 2jlq_A 187 YQGKTVWFVPSIKAGNDIANCLRKSGKR-VIQLSRKTFD 224 (451)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHTTTCC-EEEECTTTHH
T ss_pred CCCCEEEEcCCHHHHHHHHHHHHHcCCe-EEECCHHHHH
Confidence 3568999999988899999999999976 7778876553
No 350
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=23.90 E-value=88 Score=23.36 Aligned_cols=18 Identities=28% Similarity=0.540 Sum_probs=13.4
Q ss_pred cCCCeEEEEeCCC-ccHHH
Q 031788 93 KEEDRLVVGCQSG-ARSLH 110 (153)
Q Consensus 93 ~~~~~ivi~c~~g-~~a~~ 110 (153)
....+|+|+|..| +|+..
T Consensus 237 ~~~~PivVHCsaGvGRTGt 255 (316)
T 3b7o_A 237 MDAGPVVVHCSAGIGRTGT 255 (316)
T ss_dssp TTCCCEEEEESSSSHHHHH
T ss_pred CCCCCEEEEcCCCCcHHHH
Confidence 4678999999966 46543
No 351
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=23.89 E-value=72 Score=24.15 Aligned_cols=30 Identities=30% Similarity=0.284 Sum_probs=22.0
Q ss_pred ccCCCeEEEEeCCCc-------cHHHHHHHHHHCCcc
Q 031788 92 CKEEDRLVVGCQSGA-------RSLHATADLLGAGFK 121 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~-------~a~~~~~~L~~~G~~ 121 (153)
+.++++|-+++.++. +-.++.+.|++.||+
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~ 46 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFH 46 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCE
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCE
Confidence 467888999988663 234667788889987
No 352
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=23.73 E-value=65 Score=23.37 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=24.6
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCc--ccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGF--KHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~--~~v~ 124 (153)
.++.++++++ +|.....+.+.|++.|- .++.
T Consensus 155 ~~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I~ 190 (243)
T 1bd3_D 155 RERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERII 190 (243)
T ss_dssp GGSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHHcCCCcceEE
Confidence 3577888866 78888899999999998 6664
No 353
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=23.73 E-value=1.4e+02 Score=22.63 Aligned_cols=42 Identities=21% Similarity=0.128 Sum_probs=27.5
Q ss_pred HHHhhccCCCeEEEEeC-CCc----cHHHHHHHHHHCCccceeeccc
Q 031788 87 KVRSLCKEEDRLVVGCQ-SGA----RSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 87 ~~~~~~~~~~~ivi~c~-~g~----~a~~~~~~L~~~G~~~v~~l~g 128 (153)
++.+.++..+-+++.|+ +|. .++.+++.+++.|+.-+.++.+
T Consensus 73 eI~~~l~~aD~VFVtaGLGGGTGTGaAPVvAeiake~GalvVavVt~ 119 (315)
T 3r4v_A 73 ALMDTIPEADFYIVCYSLGGGSGSVLGPLITGQLADRKASFVSFVVG 119 (315)
T ss_dssp HHHHTSCCBSCEEEEEESSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHhcCCCCEEEEEeccCCccccchHHHHHHHHHHcCCCEEEEEec
Confidence 34444666667777777 332 3678888999999976554444
No 354
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=23.71 E-value=1.2e+02 Score=20.74 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=32.4
Q ss_pred hHHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceee
Q 031788 82 PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 82 ~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
+.+.+.+.+.+.++..+++.+........+...+.+.||..+..
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccccc
Confidence 47788888777889988888765445556677788889876543
No 355
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.65 E-value=85 Score=23.18 Aligned_cols=39 Identities=23% Similarity=0.269 Sum_probs=28.7
Q ss_pred hhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 90 SLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 90 ~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
.++++...++++..+|..+....+.+.+.||+-|+.+.-
T Consensus 8 ~l~~~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP 46 (294)
T 2yv1_A 8 ILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTP 46 (294)
T ss_dssp CSSCTTCCEEEETTTSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred HHhCCCCEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCC
Confidence 346677777777667777788888998899985655543
No 356
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=23.40 E-value=76 Score=22.82 Aligned_cols=30 Identities=10% Similarity=0.165 Sum_probs=16.4
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~ 32 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWH-AVGC 32 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE-EEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCe-EEEE
Confidence 34555555555566666666666644 4433
No 357
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=23.39 E-value=88 Score=24.95 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=17.0
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
.++++|++...+|.-|..++..|++.|++
T Consensus 8 ~~~~KVvVA~SGGlDSSvll~~L~e~G~e 36 (455)
T 1k92_A 8 PVGQRIGIAFSGGLDTSAALLWMRQKGAV 36 (455)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred cCCCeEEEEEcChHHHHHHHHHHHHcCCE
Confidence 44555555555555666666666666654
No 358
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=23.39 E-value=89 Score=22.60 Aligned_cols=32 Identities=28% Similarity=0.384 Sum_probs=24.8
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++++|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~-V~~~ 41 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYK-VRGT 41 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE-EEEE
Confidence 4567777777888888889999999985 6544
No 359
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=23.37 E-value=65 Score=20.15 Aligned_cols=25 Identities=12% Similarity=-0.036 Sum_probs=20.5
Q ss_pred eEEEEeC-CCccHHHHHHHHHHCCcc
Q 031788 97 RLVVGCQ-SGARSLHATADLLGAGFK 121 (153)
Q Consensus 97 ~ivi~c~-~g~~a~~~~~~L~~~G~~ 121 (153)
.|.+|.. .|..+.++.+.|.+.|++
T Consensus 6 ~i~iY~~~~C~~C~ka~~~L~~~gi~ 31 (120)
T 2kok_A 6 SVTIYGIKNCDTMKKARIWLEDHGID 31 (120)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTCC
T ss_pred EEEEEECCCChHHHHHHHHHHHcCCc
Confidence 4778876 668888999999999886
No 360
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=23.33 E-value=82 Score=23.12 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=28.9
Q ss_pred HHHHHHHhh-cc-CCCeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 83 DFLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 83 ~~~~~~~~~-~~-~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
-|...+.+. .+ ++++++++. .|..+..++..|.+.|+.+|+++.
T Consensus 103 G~~~~L~~~~~~l~~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~ 148 (277)
T 3don_A 103 GYVNGLKQIYEGIEDAYILILG-AGGASKGIANELYKIVRPTLTVAN 148 (277)
T ss_dssp HHHHHHHHHSTTGGGCCEEEEC-CSHHHHHHHHHHHTTCCSCCEEEC
T ss_pred HHHHHHHHhCCCcCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEe
Confidence 344444433 22 456676664 577778888999999997777654
No 361
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=23.32 E-value=86 Score=21.98 Aligned_cols=32 Identities=16% Similarity=0.079 Sum_probs=24.2
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+++.++|...++.-...+++.|.+.|++ |..+
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~ 49 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAE-VTIC 49 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEE
Confidence 5666777766777788889999999976 6544
No 362
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=23.30 E-value=96 Score=24.00 Aligned_cols=35 Identities=11% Similarity=0.020 Sum_probs=26.6
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
+-++++|.|. ++|..+.+++..++++|++ |.+++.
T Consensus 32 ~~~~~~IlIl-G~G~lg~~~~~aa~~lG~~-v~v~d~ 66 (419)
T 4e4t_A 32 ILPGAWLGMV-GGGQLGRMFCFAAQSMGYR-VAVLDP 66 (419)
T ss_dssp CCTTCEEEEE-CCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CCCCCEEEEE-CCCHHHHHHHHHHHHCCCE-EEEECC
Confidence 3466777766 6777888999999999997 666653
No 363
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=23.29 E-value=82 Score=19.46 Aligned_cols=24 Identities=13% Similarity=-0.169 Sum_probs=18.7
Q ss_pred EEEEeC-CCccHHHHHHHHHHCCcc
Q 031788 98 LVVGCQ-SGARSLHATADLLGAGFK 121 (153)
Q Consensus 98 ivi~c~-~g~~a~~~~~~L~~~G~~ 121 (153)
|.+|.. .|..+..+-+.|.+.|++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~gi~ 26 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEHKVA 26 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCc
Confidence 567766 667788888889988876
No 364
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=23.28 E-value=1.3e+02 Score=18.27 Aligned_cols=23 Identities=22% Similarity=0.029 Sum_probs=9.2
Q ss_pred EEEEeCCCccHHHHHHHHHHCCc
Q 031788 98 LVVGCQSGARSLHATADLLGAGF 120 (153)
Q Consensus 98 ivi~c~~g~~a~~~~~~L~~~G~ 120 (153)
|+++.++..........|...|+
T Consensus 9 iLivdd~~~~~~~l~~~L~~~g~ 31 (149)
T 1k66_A 9 LLVVEDSDEDFSTFQRLLQREGV 31 (149)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTB
T ss_pred EEEEECCHHHHHHHHHHHHHcCC
Confidence 33333333333334444444444
No 365
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=23.00 E-value=80 Score=23.23 Aligned_cols=28 Identities=18% Similarity=0.083 Sum_probs=21.5
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
|++.+.|.....+|..|.+.|++ |.+++
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~-V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLK-TLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCc-EEEEe
Confidence 34446777788889999999987 77765
No 366
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=23.00 E-value=96 Score=19.08 Aligned_cols=23 Identities=13% Similarity=0.102 Sum_probs=10.4
Q ss_pred EEEEeCCCccHHHHHHHHHHCCc
Q 031788 98 LVVGCQSGARSLHATADLLGAGF 120 (153)
Q Consensus 98 ivi~c~~g~~a~~~~~~L~~~G~ 120 (153)
|++++++..........|...||
T Consensus 11 iLivd~~~~~~~~l~~~L~~~g~ 33 (147)
T 2zay_A 11 IMLVDTQLPALAASISALSQEGF 33 (147)
T ss_dssp EEEECTTGGGGHHHHHHHHHHTE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC
Confidence 44444333344444444555554
No 367
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=22.98 E-value=92 Score=23.58 Aligned_cols=33 Identities=15% Similarity=0.098 Sum_probs=25.1
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
.++++|.++ +.|..+..+++.++++|++ +..++
T Consensus 10 ~~~~~IlIl-G~G~lg~~la~aa~~lG~~-viv~d 42 (377)
T 3orq_A 10 KFGATIGII-GGGQLGKMMAQSAQKMGYK-VVVLD 42 (377)
T ss_dssp CTTCEEEEE-CCSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCCEEEEE-CCCHHHHHHHHHHHHCCCE-EEEEE
Confidence 356666666 5778889999999999996 66554
No 368
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=22.94 E-value=1.2e+02 Score=18.19 Aligned_cols=10 Identities=0% Similarity=-0.353 Sum_probs=4.1
Q ss_pred HHHHHHCCcc
Q 031788 112 TADLLGAGFK 121 (153)
Q Consensus 112 ~~~L~~~G~~ 121 (153)
...+....++
T Consensus 40 ~~~~~~~~~d 49 (136)
T 1mvo_A 40 LKKAETEKPD 49 (136)
T ss_dssp HHHHHHHCCS
T ss_pred HHHHhhcCCC
Confidence 3344444443
No 369
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=22.81 E-value=1e+02 Score=21.44 Aligned_cols=29 Identities=10% Similarity=0.111 Sum_probs=23.8
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCccce
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHV 123 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v 123 (153)
++ +|+++++ +|.....+++.|++.|-..+
T Consensus 117 ~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v 148 (213)
T 1lh0_A 117 QG-RVMLVDDVITAGTAIRESMEIIQAHGATLA 148 (213)
T ss_dssp CS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEE
T ss_pred CC-CEEEEEecccchHHHHHHHHHHHHCCCeEE
Confidence 67 8999987 77777888999999997654
No 370
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=22.78 E-value=1.7e+02 Score=24.93 Aligned_cols=56 Identities=11% Similarity=-0.002 Sum_probs=39.1
Q ss_pred hHHHHHHHhhccCCCeEEEEeCCC--c--cHHHHHHHHHHCCccceeecccc------HHHHHhCCCce
Q 031788 82 PDFLKKVRSLCKEEDRLVVGCQSG--A--RSLHATADLLGAGFKHVSNFGGG------HMAWVQNGLKV 140 (153)
Q Consensus 82 ~~~~~~~~~~~~~~~~ivi~c~~g--~--~a~~~~~~L~~~G~~~v~~l~gG------~~~w~~~g~~~ 140 (153)
+++.+...+ .+-.+|.+|..- . ....+.+.|++.|..++.++.|| +..+.+.|..-
T Consensus 637 eeiv~aA~e---~~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivGG~~p~~d~~~l~~~GaD~ 702 (727)
T 1req_A 637 EETARQAVE---ADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVE 702 (727)
T ss_dssp HHHHHHHHH---TTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHTTEEE
T ss_pred HHHHHHHHH---cCCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEcCCCccccHHHHHhCCCCE
Confidence 366665554 466688898833 2 24678889999999889999998 24456666543
No 371
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=22.74 E-value=1.2e+02 Score=17.66 Aligned_cols=24 Identities=8% Similarity=-0.064 Sum_probs=10.0
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
+-.++..|.++ ..+...+....++
T Consensus 26 g~~vv~~~~~~---~~a~~~~~~~~~d 49 (120)
T 1tmy_A 26 GYEVAGEATNG---REAVEKYKELKPD 49 (120)
T ss_dssp TCEEEEEESSH---HHHHHHHHHHCCS
T ss_pred CcEEEEEECCH---HHHHHHHHhcCCC
Confidence 34444444443 3333444444443
No 372
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=22.72 E-value=94 Score=22.08 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=18.7
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++.++|...++.-...+++.|.+.|++ |..+
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~-V~~~ 62 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLK-VVGC 62 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEE
Confidence 455555555666666667777777764 4443
No 373
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=22.68 E-value=61 Score=24.03 Aligned_cols=31 Identities=10% Similarity=-0.071 Sum_probs=26.0
Q ss_pred cCCCeEEEEeC---CCccHHHHHHHHHHCCccce
Q 031788 93 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHV 123 (153)
Q Consensus 93 ~~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v 123 (153)
.++++|+++++ +|.....+++.|++.|-..|
T Consensus 194 ~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV 227 (291)
T 1o57_A 194 KTGSNVLIIDDFMKAGGTINGMINLLDEFNANVA 227 (291)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEE
T ss_pred CCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEE
Confidence 47899999987 77778888999999998755
No 374
>1ci4_A Protein (barrier-TO-autointegration factor (BAF) ); DNA binding protein, retroviral integration, preintegration complex; 1.90A {Homo sapiens} SCOP: a.60.5.1 PDB: 1qck_A 2bzf_A 2ezx_A 2ezy_A 2ezz_A 2odg_A
Probab=22.66 E-value=20 Score=22.01 Aligned_cols=25 Identities=16% Similarity=0.045 Sum_probs=20.5
Q ss_pred ccHHHHHHHHHHCCccceeeccccH
Q 031788 106 ARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 106 ~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
..+...+..|.+.||++.|.+-|=|
T Consensus 25 GIG~~~~~~L~~~Gf~kAy~lLGqF 49 (89)
T 1ci4_A 25 GIGEVLGKKLEERGFDKAYVVLGQF 49 (89)
T ss_dssp TCCHHHHHHHHHTTCCSHHHHHHHH
T ss_pred CcCHHHHHHHHHcCccHHHHHHHHH
Confidence 3567889999999999998887755
No 375
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=22.65 E-value=87 Score=23.05 Aligned_cols=37 Identities=24% Similarity=0.286 Sum_probs=28.5
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
+++..+|+++..+|..+...++.+.+.||+-++.+.-
T Consensus 4 ~~~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP 40 (288)
T 1oi7_A 4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTP 40 (288)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECC
Confidence 4678889998778887888888888889985555443
No 376
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=22.60 E-value=21 Score=23.93 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=21.4
Q ss_pred eEEEEeCCC-ccHHHHHHHHHH----CCcc-ceeeccccHHHH
Q 031788 97 RLVVGCQSG-ARSLHATADLLG----AGFK-HVSNFGGGHMAW 133 (153)
Q Consensus 97 ~ivi~c~~g-~~a~~~~~~L~~----~G~~-~v~~l~gG~~~w 133 (153)
+|+++|.+. -||+.|...|+. .|.. ++.+...|..+|
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~ 45 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE 45 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc
Confidence 578888744 367766655553 3443 455555565544
No 377
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=22.55 E-value=1.2e+02 Score=17.63 Aligned_cols=25 Identities=20% Similarity=0.038 Sum_probs=16.0
Q ss_pred eEEEEeC-CCccH------HHHHHHHHHCCcc
Q 031788 97 RLVVGCQ-SGARS------LHATADLLGAGFK 121 (153)
Q Consensus 97 ~ivi~c~-~g~~a------~~~~~~L~~~G~~ 121 (153)
+|++|.. .+... .++-+.|.+.|++
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~ 34 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGKRIQ 34 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHCCCc
Confidence 4666655 44455 6777777777765
No 378
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=22.51 E-value=55 Score=24.74 Aligned_cols=24 Identities=25% Similarity=0.365 Sum_probs=19.8
Q ss_pred CccHHHHHHHHHHCCccceeecccc
Q 031788 105 GARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 105 g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
|.++...|+.+...|++ |..+.|-
T Consensus 65 GkmG~aiAe~~~~~Ga~-V~lv~g~ 88 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYG-VLFLYRA 88 (313)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEEET
T ss_pred cHHHHHHHHHHHHCCCE-EEEEecC
Confidence 66888899999999997 7777763
No 379
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=22.49 E-value=1.1e+02 Score=23.09 Aligned_cols=30 Identities=27% Similarity=0.204 Sum_probs=20.0
Q ss_pred ccCCCeEEEEeCCCcc-------HHHHHHHHHHCCcc
Q 031788 92 CKEEDRLVVGCQSGAR-------SLHATADLLGAGFK 121 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~-------a~~~~~~L~~~G~~ 121 (153)
+.++++|-+++.++.. -.++.+.|++.||+
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~ 45 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFH 45 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCE
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCE
Confidence 3577888888775542 23556677788876
No 380
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=22.41 E-value=1.3e+02 Score=26.97 Aligned_cols=46 Identities=7% Similarity=-0.105 Sum_probs=35.2
Q ss_pred HHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHC--CccceeeccccHH
Q 031788 85 LKKVRSLCKEEDRLVVGCQSGARSLHATADLLGA--GFKHVSNFGGGHM 131 (153)
Q Consensus 85 ~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~--G~~~v~~l~gG~~ 131 (153)
.+.+...+.++..++++|++-..+...++.|.+. |+. +..++|++.
T Consensus 802 ~~~il~~l~~g~qvlvf~~~v~~~~~l~~~L~~~~p~~~-v~~lhg~~~ 849 (1151)
T 2eyq_A 802 REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEAR-IAIGHGQMR 849 (1151)
T ss_dssp HHHHHHHHTTTCEEEEECCCSSCHHHHHHHHHHHCTTSC-EEECCSSCC
T ss_pred HHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHhCCCCe-EEEEeCCCC
Confidence 3444444567889999999888889999999887 554 888998863
No 381
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=22.35 E-value=1.9e+02 Score=19.60 Aligned_cols=59 Identities=17% Similarity=0.086 Sum_probs=34.5
Q ss_pred HHHHHHh-CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccHHHH
Q 031788 35 AAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARSLHA 111 (153)
Q Consensus 35 ~~~~~~~-~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a~~~ 111 (153)
.+.++++ .+..++|+-+..+ . .+ ...| ++.....+. -.+.+.-|++|.+|.-...+
T Consensus 20 ~i~~~L~~~G~eV~D~G~~~~-~-----~~--~dYp-------------d~a~~va~~V~~g~~d~GIliCGTGiG~sia 78 (162)
T 2vvp_A 20 RIIEHLKQTGHEPIDCGALRY-D-----AD--DDYP-------------AFCIAAATRTVADPGSLGIVLGGSGNGEQIA 78 (162)
T ss_dssp HHHHHHHHTTCEEEECSCCSC-C-----TT--CCHH-------------HHHHHHHHHHHHSTTCEEEEEESSSHHHHHH
T ss_pred HHHHHHHHCCCEEEEeCCCCC-C-----CC--CChH-------------HHHHHHHHHHHcCCCceEEEEeCCcHHHHHH
Confidence 3555555 4689999976322 0 12 2222 454444444 24567899999998665555
Q ss_pred HHH
Q 031788 112 TAD 114 (153)
Q Consensus 112 ~~~ 114 (153)
+..
T Consensus 79 ANK 81 (162)
T 2vvp_A 79 ANK 81 (162)
T ss_dssp HHT
T ss_pred Hhc
Confidence 553
No 382
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=22.35 E-value=2.1e+02 Score=20.29 Aligned_cols=60 Identities=20% Similarity=0.234 Sum_probs=35.4
Q ss_pred HHHHHHHh-CCCeEEecCC-hhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccHH
Q 031788 34 RAAKNLLE-SGYGYLDVRT-AEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARSL 109 (153)
Q Consensus 34 ~~~~~~~~-~~~~iIDvR~-~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a~ 109 (153)
+.+.++++ .+..++|+-. +.+ ..+ ...| ++....... -.+.+.-|++|++|.-..
T Consensus 23 ~~l~~~L~~~G~eV~D~G~~~~~------~~~--~dYp-------------d~a~~vA~~V~~g~~d~GIliCGTGiG~s 81 (214)
T 3ono_A 23 GELNSVAGGLGHDVFNVGMTDEN------DHH--LTYI-------------HLGIMASILLNSKAVDFVVTGCGTGQGAL 81 (214)
T ss_dssp HHHHHHHHHTTCEEEECSCSSTT------SSC--CCHH-------------HHHHHHHHHHHTTSCSEEEEEESSSHHHH
T ss_pred HHHHHHHHHCCCEEEEcCCCCCC------CCC--CCHH-------------HHHHHHHHHHHcCCCCEEEEEcCCcHHHH
Confidence 35666665 4689999974 111 112 3222 454444444 245577999999996655
Q ss_pred HHHHH
Q 031788 110 HATAD 114 (153)
Q Consensus 110 ~~~~~ 114 (153)
.++..
T Consensus 82 iaANK 86 (214)
T 3ono_A 82 MSCNL 86 (214)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 55553
No 383
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=22.33 E-value=98 Score=23.44 Aligned_cols=32 Identities=13% Similarity=0.333 Sum_probs=23.8
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCcc-ceeeccc
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFK-HVSNFGG 128 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~-~v~~l~g 128 (153)
++|+|+ ..|.....++..|++.|++ +|.+++.
T Consensus 2 k~vvII-GaG~aGl~aA~~L~~~g~~~~V~lie~ 34 (404)
T 3fg2_P 2 DTVLIA-GAGHAGFQVAVSLRQAKYPGRIALIND 34 (404)
T ss_dssp CCEEEE-CCSHHHHHHHHHHHHTTCCSCEEEECC
T ss_pred CCEEEE-cChHHHHHHHHHHHhhCcCCCEEEEeC
Confidence 456666 5677778889999999985 5776654
No 384
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=22.22 E-value=31 Score=23.16 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=22.7
Q ss_pred CeEEEEeCCCc-cHHHHHHHHH----HCCc-cceeeccccHHHH
Q 031788 96 DRLVVGCQSGA-RSLHATADLL----GAGF-KHVSNFGGGHMAW 133 (153)
Q Consensus 96 ~~ivi~c~~g~-~a~~~~~~L~----~~G~-~~v~~l~gG~~~w 133 (153)
.+|+++|.+.. ||+.|...++ +.|. +++.+...|...|
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 48 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSY 48 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCT
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCc
Confidence 46888887443 6766655544 3454 3466666665555
No 385
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=22.19 E-value=1.3e+02 Score=17.66 Aligned_cols=12 Identities=8% Similarity=-0.294 Sum_probs=5.5
Q ss_pred HHHHHHHHCCcc
Q 031788 110 HATADLLGAGFK 121 (153)
Q Consensus 110 ~~~~~L~~~G~~ 121 (153)
.+...+....++
T Consensus 36 ~a~~~~~~~~~d 47 (124)
T 1mb3_A 36 SALSIARENKPD 47 (124)
T ss_dssp HHHHHHHHHCCS
T ss_pred HHHHHHhcCCCC
Confidence 344445544443
No 386
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=22.19 E-value=1.4e+02 Score=20.96 Aligned_cols=30 Identities=10% Similarity=-0.241 Sum_probs=23.1
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++-.++|.+.. +..+.+.|++.|++++.++
T Consensus 200 ~~~ai~~~~d~-a~g~~~al~~~g~~di~vi 229 (304)
T 3gbv_A 200 DVKHGITFNSK-VYIIGEYLQQRRKSDFSLI 229 (304)
T ss_dssp TCCEEEESSSC-THHHHHHHHHTTCCSCEEE
T ss_pred CeEEEEEcCcc-hHHHHHHHHHcCCCCcEEE
Confidence 45577888777 8889999999998666543
No 387
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=22.18 E-value=78 Score=23.51 Aligned_cols=28 Identities=21% Similarity=0.157 Sum_probs=19.8
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
|++++.|.....+|..|.+.|++ |.+++
T Consensus 4 V~IVGaGpaGl~~A~~L~~~G~~-v~v~E 31 (412)
T 4hb9_A 4 VGIIGAGIGGTCLAHGLRKHGIK-VTIYE 31 (412)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCE-EEEEC
T ss_pred EEEECcCHHHHHHHHHHHhCCCC-EEEEe
Confidence 34446777777888888888886 66553
No 388
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=22.18 E-value=76 Score=23.56 Aligned_cols=36 Identities=8% Similarity=0.193 Sum_probs=26.9
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHC-Cccceeecccc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGA-GFKHVSNFGGG 129 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~-G~~~v~~l~gG 129 (153)
+++.|+|...+|.-+..+++.|.+. |+.+|..+.-.
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~ 56 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD 56 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 4567777777888888888888888 97567765433
No 389
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=22.18 E-value=2.2e+02 Score=20.36 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=43.8
Q ss_pred CCcceeecHHHHHHHHhC-CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeC
Q 031788 25 GAEVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ 103 (153)
Q Consensus 25 ~~~~~~i~~~~~~~~~~~-~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~ 103 (153)
......++.+++.+++++ ..+++|+=..---....+|++ .+..+.+. ..+.++++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~k~i~~D~DGTL~~~~~~~~~~------------------~~~l~~l~---~~g~~~~~~Tn 61 (306)
T 2oyc_A 3 LARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGA------------------PELLERLA---RAGKAALFVSN 61 (306)
T ss_dssp CCCCEECCHHHHHHHHHHCSEEEECSBTTTEETTEECTTH------------------HHHHHHHH---HTTCEEEEEEC
T ss_pred chhhhcCCHHHHHHHHhhCCEEEECCCCcEecCCccCcCH------------------HHHHHHHH---HCCCeEEEEEC
Confidence 345678888888888864 467787632110000111211 13333333 46788887776
Q ss_pred CCc-cHHHHHHHHHHCCcc
Q 031788 104 SGA-RSLHATADLLGAGFK 121 (153)
Q Consensus 104 ~g~-~a~~~~~~L~~~G~~ 121 (153)
... ........|...|++
T Consensus 62 ~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 62 NSRRARPELALRFARLGFG 80 (306)
T ss_dssp CCSSCHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHhcCCC
Confidence 444 455667888888886
No 390
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=22.15 E-value=63 Score=21.00 Aligned_cols=38 Identities=21% Similarity=0.293 Sum_probs=26.8
Q ss_pred HHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCc
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGF 120 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~ 120 (153)
.+.+.+.+.+.++..+++..............|.+.||
T Consensus 115 ~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 115 EILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp HHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 66666666667777777765554455677888899998
No 391
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=22.13 E-value=99 Score=18.47 Aligned_cols=27 Identities=15% Similarity=0.094 Sum_probs=19.6
Q ss_pred CCeEEEEeC-CCccHHHHHHHHHHCCcc
Q 031788 95 EDRLVVGCQ-SGARSLHATADLLGAGFK 121 (153)
Q Consensus 95 ~~~ivi~c~-~g~~a~~~~~~L~~~G~~ 121 (153)
+.+|++|.. .|..+.++...|.+.|++
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~~i~ 42 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRKGVE 42 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCC
Confidence 456777766 667777888888888765
No 392
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.11 E-value=1.2e+02 Score=18.90 Aligned_cols=12 Identities=8% Similarity=-0.125 Sum_probs=5.0
Q ss_pred HHHHHHHHHCCc
Q 031788 109 LHATADLLGAGF 120 (153)
Q Consensus 109 ~~~~~~L~~~G~ 120 (153)
......|...||
T Consensus 21 ~~l~~~L~~~g~ 32 (154)
T 2rjn_A 21 NSLKRLIKRLGC 32 (154)
T ss_dssp HHHHHHHHTTTC
T ss_pred HHHHHHHHHcCC
Confidence 333444444444
No 393
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.09 E-value=98 Score=22.07 Aligned_cols=29 Identities=17% Similarity=0.189 Sum_probs=18.2
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceee
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
++|+|...+|..+..+++.|.+.|++ |..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~ 31 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGNP-TYA 31 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTCC-EEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCCCc-EEE
Confidence 34666655666667777777777754 443
No 394
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=22.05 E-value=25 Score=23.60 Aligned_cols=39 Identities=13% Similarity=0.115 Sum_probs=24.9
Q ss_pred CCeEEEEeCCC-ccHHHHHHHHH----HCCcc-ceeeccccHHHH
Q 031788 95 EDRLVVGCQSG-ARSLHATADLL----GAGFK-HVSNFGGGHMAW 133 (153)
Q Consensus 95 ~~~ivi~c~~g-~~a~~~~~~L~----~~G~~-~v~~l~gG~~~w 133 (153)
..+|+++|.+. -||+.|...|+ +.|.. ++.+...|...|
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 49 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGY 49 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSST
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCcc
Confidence 45689999744 37777655554 35664 466666666655
No 395
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=22.00 E-value=99 Score=21.73 Aligned_cols=32 Identities=13% Similarity=0.097 Sum_probs=22.4
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
.++.++|...++.-...+++.|.+.|++ |..+
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~-V~~~ 46 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAK-VVIA 46 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEE
Confidence 3556666666777778888888888875 5544
No 396
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=21.85 E-value=56 Score=26.79 Aligned_cols=34 Identities=12% Similarity=0.135 Sum_probs=26.6
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHC------Cccceeecccc
Q 031788 95 EDRLVVGCQSGARSLHATADLLGA------GFKHVSNFGGG 129 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~------G~~~v~~l~gG 129 (153)
+.+++|+|++-..+..+++.|.+. |+. +..+.|+
T Consensus 400 ~~~~IVF~~s~~~~~~l~~~L~~~~~l~~~g~~-~~~lhg~ 439 (699)
T 4gl2_A 400 SARGIIFTKTRQSAYALSQWITENEKFAEVGVK-AHHLIGA 439 (699)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHSSCSCC------CEECCCS
T ss_pred CCcEEEEECcHHHHHHHHHHHHhCccccccCcc-eEEEECC
Confidence 788999999888888999999887 776 6677777
No 397
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=21.63 E-value=1.2e+02 Score=18.88 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=16.7
Q ss_pred eEEEEeCCCccHHHHHHHHHHCCccceeeccccHHH
Q 031788 97 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMA 132 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~~~ 132 (153)
+|++++++..........|...||. |.....+-.+
T Consensus 5 ~ILivdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~a 39 (155)
T 1qkk_A 5 SVFLIDDDRDLRKAMQQTLELAGFT-VSSFASATEA 39 (155)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE-EEEESCHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCcE-EEEECCHHHH
Confidence 3444444433444555555556654 4444444433
No 398
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=21.60 E-value=92 Score=22.10 Aligned_cols=31 Identities=3% Similarity=-0.027 Sum_probs=20.4
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++.++|...++.-...+++.|.+.|++ |..+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~-V~~~ 61 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSK-LVLW 61 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEE
Confidence 455666655666677777778777765 5443
No 399
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=21.60 E-value=86 Score=21.00 Aligned_cols=29 Identities=10% Similarity=0.172 Sum_probs=18.2
Q ss_pred eEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 97 RLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+|+|...+|.-...+++.|.+.|++ |..+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~-V~~~ 30 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHE-VTAI 30 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCE-EEEE
Confidence 3555555666677777777777754 5444
No 400
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=21.57 E-value=86 Score=22.79 Aligned_cols=31 Identities=13% Similarity=0.122 Sum_probs=25.8
Q ss_pred CCCeEEEEeC---CCccHHHHHHHHHHCCcccee
Q 031788 94 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 124 (153)
Q Consensus 94 ~~~~ivi~c~---~g~~a~~~~~~L~~~G~~~v~ 124 (153)
++++|+++++ +|.....+.+.|++.|-..+.
T Consensus 155 ~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~ 188 (250)
T 3ozf_A 155 KGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVA 188 (250)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEE
Confidence 6889999877 788888889999999976654
No 401
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=21.47 E-value=2.2e+02 Score=20.06 Aligned_cols=88 Identities=13% Similarity=0.068 Sum_probs=44.2
Q ss_pred cHHHHHHHHhC-C-CeEEecCChhhhhcCCCCCccee--C-ccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCc
Q 031788 32 DVRAAKNLLES-G-YGYLDVRTAEEFKEGHVDAAKIF--N-IPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 106 (153)
Q Consensus 32 ~~~~~~~~~~~-~-~~iIDvR~~~e~~~ghi~ga~~i--~-ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~ 106 (153)
+..++.+..++ + .+++|+.+.++-....=.|+..+ + ..+.... ....++-++.+++.+ . .+-+++.+|.
T Consensus 117 ~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~-~~~~~~~~li~~l~~---~--~ipvIA~GGI 190 (229)
T 3q58_A 117 DIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPI-TPVEPDLAMVTQLSH---A--GCRVIAEGRY 190 (229)
T ss_dssp CHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSSC-CCSSCCHHHHHHHHT---T--TCCEEEESSC
T ss_pred HHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCCCC-cCCCCCHHHHHHHHH---c--CCCEEEECCC
Confidence 34455555443 3 46678877766654322344223 1 1121100 011112244444432 2 4566677888
Q ss_pred cHHHHHHHHHHCCccceee
Q 031788 107 RSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 107 ~a~~~~~~L~~~G~~~v~~ 125 (153)
.+..-+..+.+.|.+-|.+
T Consensus 191 ~t~~d~~~~~~~GadgV~V 209 (229)
T 3q58_A 191 NTPALAANAIEHGAWAVTV 209 (229)
T ss_dssp CSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHcCCCEEEE
Confidence 7777777777889885543
No 402
>3pkz_A Recombinase SIN; small serine recombinase, resolvase, DNA, recombination; 1.80A {Staphylococcus aureus}
Probab=21.47 E-value=1.6e+02 Score=18.36 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=29.7
Q ss_pred CChHHHHHHHhhccCCCeEEEEeC-----CCccHHHHHHHHHHCCccceeeccccH
Q 031788 80 KNPDFLKKVRSLCKEEDRLVVGCQ-----SGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~ivi~c~-----~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.+|.|.+.+... .+++.||++.- +........+.|...|.. +..+.+|+
T Consensus 42 ~Rp~l~~ll~~~-~~gd~lvv~~ldRl~R~~~~~~~~~~~l~~~gv~-l~~~~~~~ 95 (124)
T 3pkz_A 42 NRPILQKALNFV-EMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQ-LMITSLPM 95 (124)
T ss_dssp TCHHHHHHHHHC-CTTCEEEESSHHHHCSCHHHHHHHHHHHHHTTCE-EEETTCGG
T ss_pred cCHHHHHHHHHH-HCCCEEEEeecccccCCHHHHHHHHHHHHHCCCE-EEEecCCc
Confidence 356777777665 56665555522 111234555678888976 77777764
No 403
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=21.45 E-value=70 Score=22.26 Aligned_cols=32 Identities=16% Similarity=-0.048 Sum_probs=21.7
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+++.++|...++.-....++.|.+.|+. |...
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~ 44 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSK-VIIS 44 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEE
Confidence 4566666665666777778888888865 5544
No 404
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=21.40 E-value=1.5e+02 Score=17.99 Aligned_cols=13 Identities=8% Similarity=0.072 Sum_probs=5.9
Q ss_pred EEEEeCCCccHHH
Q 031788 98 LVVGCQSGARSLH 110 (153)
Q Consensus 98 ivi~c~~g~~a~~ 110 (153)
.+..|.++..+..
T Consensus 29 ~v~~~~~~~~al~ 41 (133)
T 2r25_B 29 NIELACDGQEAFD 41 (133)
T ss_dssp CEEEESSHHHHHH
T ss_pred eEEEECCHHHHHH
Confidence 3444555444433
No 405
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=21.29 E-value=88 Score=23.31 Aligned_cols=28 Identities=18% Similarity=0.089 Sum_probs=19.3
Q ss_pred eEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 97 RLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 97 ~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+|.+. ++|..+..+++.++++||+ +..+
T Consensus 3 ~I~il-Ggg~~g~~~~~~Ak~~G~~-vv~v 30 (363)
T 4ffl_A 3 TICLV-GGKLQGFEAAYLSKKAGMK-VVLV 30 (363)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCE-EEEE
T ss_pred EEEEE-CCCHHHHHHHHHHHHCCCE-EEEE
Confidence 45555 4666777888888888887 4444
No 406
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=21.22 E-value=1e+02 Score=21.70 Aligned_cols=27 Identities=15% Similarity=0.112 Sum_probs=14.5
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
++.++|...++.-...+++.|.+.|++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~ 33 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAH 33 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE
Confidence 344444444555555666666666653
No 407
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=21.21 E-value=1.2e+02 Score=21.74 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=20.2
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++|+|...+|..+..+++.|.+.|++ |..+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~ 34 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHP-TYVL 34 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCC-EEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCc-EEEE
Confidence 45666666777777777777777765 5544
No 408
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=21.17 E-value=72 Score=24.47 Aligned_cols=29 Identities=21% Similarity=0.248 Sum_probs=22.1
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccc
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKH 122 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~ 122 (153)
.+.+++.|.|++. ....+.+.++++|++-
T Consensus 3 ~~~k~l~Il~~~~-~~~~i~~aa~~lG~~v 31 (425)
T 3vot_A 3 KRNKNLAIICQNK-HLPFIFEEAERLGLKV 31 (425)
T ss_dssp CCCCEEEEECCCT-TCCHHHHHHHHTTCEE
T ss_pred CCCcEEEEECCCh-hHHHHHHHHHHCCCEE
Confidence 4678899998643 4467788889999983
No 409
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=21.16 E-value=90 Score=21.51 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=24.3
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++-.++|.+...+..+.+.|++.|++++.++
T Consensus 172 ~~~ai~~~~d~~A~g~~~al~~~g~~di~vi 202 (255)
T 1byk_A 172 ETTALLCATDTLALGASKYLQEQRIDTLQLA 202 (255)
T ss_dssp TCCEEEESSHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCEEEEeChHHHHHHHHHHHHcCCCcEEEE
Confidence 4567888887788889999999998666544
No 410
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=21.15 E-value=1.1e+02 Score=18.58 Aligned_cols=11 Identities=18% Similarity=-0.073 Sum_probs=4.6
Q ss_pred HHHHHHHCCcc
Q 031788 111 ATADLLGAGFK 121 (153)
Q Consensus 111 ~~~~L~~~G~~ 121 (153)
+...+....++
T Consensus 40 a~~~l~~~~~d 50 (142)
T 2qxy_A 40 AFTFLRREKID 50 (142)
T ss_dssp HHHHHTTSCCS
T ss_pred HHHHHhccCCC
Confidence 33444444433
No 411
>2fa8_A Hypothetical protein ATU0228; ALPH-beta structure, 4 helix bundle, structural genomics, PS protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.47.1.23
Probab=21.06 E-value=73 Score=19.98 Aligned_cols=19 Identities=16% Similarity=0.015 Sum_probs=12.3
Q ss_pred CCeEEEEeCCCccHHHHHH
Q 031788 95 EDRLVVGCQSGARSLHATA 113 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~ 113 (153)
.+-.|.||..|.-..++++
T Consensus 8 ~~V~I~YC~~C~~~~Ra~~ 26 (105)
T 2fa8_A 8 PRIAIRYCTQCNWLLRAGW 26 (105)
T ss_dssp CEEEEEEETTTTCHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHH
Confidence 4457899998864444443
No 412
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=21.05 E-value=58 Score=25.15 Aligned_cols=27 Identities=11% Similarity=0.097 Sum_probs=22.5
Q ss_pred HHHHHHHHHHCCccceeeccccHHHHHh
Q 031788 108 SLHATADLLGAGFKHVSNFGGGHMAWVQ 135 (153)
Q Consensus 108 a~~~~~~L~~~G~~~v~~l~gG~~~w~~ 135 (153)
...+.+.|++.|++ |+++.||+..+.+
T Consensus 226 ~~eLi~~L~~~G~~-v~IVSgg~~~~v~ 252 (385)
T 4gxt_A 226 MVDLYRSLEENGID-CYIVSASFIDIVR 252 (385)
T ss_dssp HHHHHHHHHHTTCE-EEEEEEEEHHHHH
T ss_pred HHHHHHHHHHCCCe-EEEEcCCcHHHHH
Confidence 56788999999998 9999999876543
No 413
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=21.00 E-value=93 Score=22.68 Aligned_cols=18 Identities=17% Similarity=0.314 Sum_probs=13.3
Q ss_pred cCCCeEEEEeCCC-ccHHH
Q 031788 93 KEEDRLVVGCQSG-ARSLH 110 (153)
Q Consensus 93 ~~~~~ivi~c~~g-~~a~~ 110 (153)
..+.+|+|+|..| +|+..
T Consensus 202 ~~~~pivVHCsaGvGRTGt 220 (284)
T 1fpr_A 202 PHAGPIIVHSSAGIGRTGT 220 (284)
T ss_dssp TTCCCEEEESSBSSHHHHH
T ss_pred CCCCcEEEEcCCCCcHHHH
Confidence 4678999999966 46543
No 414
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=20.97 E-value=77 Score=26.12 Aligned_cols=35 Identities=14% Similarity=-0.025 Sum_probs=29.7
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeecccc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 129 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG 129 (153)
...+++++|++...+..++..|.+.|+. +..+.|.
T Consensus 354 ~~~~~LVF~~s~~~a~~l~~~L~~~g~~-v~~lhg~ 388 (618)
T 2whx_A 354 YQGKTVWFVPSIKAGNDIANCLRKSGKR-VIQLSRK 388 (618)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTT
T ss_pred CCCCEEEEECChhHHHHHHHHHHHcCCc-EEEEChH
Confidence 4668999999988899999999999987 7777764
No 415
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=20.93 E-value=1.2e+02 Score=21.61 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=21.1
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++|+|...+|..+..+++.|.+.|++ |..+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~l 34 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHP-TFLL 34 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCC-EEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCC-EEEE
Confidence 45677766777778888888888865 5544
No 416
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.89 E-value=70 Score=21.73 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=21.3
Q ss_pred CeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 96 DRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 96 ~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
++|+|...+|.-+..+++.|.+.|++ |..+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~-V~~~~ 35 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFE-VTAVV 35 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCE-EEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCE-EEEEE
Confidence 45666666777777888888888864 55443
No 417
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=20.84 E-value=1.1e+02 Score=24.59 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=27.2
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
.+++.++|...+|.-...+++.|.+.|+.++..+
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~ 290 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLT 290 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEE
Confidence 5677788887788888899999999999766544
No 418
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=20.77 E-value=1.4e+02 Score=18.43 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=14.2
Q ss_pred EEEEeCCCccHHHHHHHHHHCCcc-ceeeccccHH
Q 031788 98 LVVGCQSGARSLHATADLLGAGFK-HVSNFGGGHM 131 (153)
Q Consensus 98 ivi~c~~g~~a~~~~~~L~~~G~~-~v~~l~gG~~ 131 (153)
|+++.++..........|...|+. .|.....|-+
T Consensus 7 ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~~~~ 41 (152)
T 3heb_A 7 IVMIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTS 41 (152)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCCCCEEEESSHHH
T ss_pred EEEEeCCHHHHHHHHHHHHhCCCcceEEEeCCHHH
Confidence 344433333334444445555553 2444444433
No 419
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=20.76 E-value=95 Score=23.33 Aligned_cols=32 Identities=19% Similarity=0.094 Sum_probs=21.9
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCcc-ceeecc
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFK-HVSNFG 127 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~-~v~~l~ 127 (153)
+|+|||+ ..|.-...++.+|++.|.+ +|.+++
T Consensus 2 GKkVvII-G~G~AG~~aA~~L~~~~~~~~Vtlie 34 (401)
T 3vrd_B 2 GRKVVVV-GGGTGGATAAKYIKLADPSIEVTLIE 34 (401)
T ss_dssp CCEEEEE-CCSHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred cCEEEEE-CCcHHHHHHHHHHHhcCcCCeEEEEe
Confidence 5777777 4666667888888887764 455554
No 420
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=20.62 E-value=2.2e+02 Score=19.68 Aligned_cols=59 Identities=17% Similarity=0.168 Sum_probs=35.3
Q ss_pred HHHHHHHhC---CCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccH
Q 031788 34 RAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARS 108 (153)
Q Consensus 34 ~~~~~~~~~---~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a 108 (153)
+.+.+++++ +..++|+-+..+ .+ ...| ++...+.+. -.+.+.-|++|.+|.-.
T Consensus 38 ~~i~~~L~~~~~G~eV~D~G~~s~-------~s--~DYP-------------d~a~~vA~~V~~g~~d~GIliCGTGiG~ 95 (179)
T 3k7p_A 38 ENLILYVKEAGDEFVPVYCGPKTA-------ES--VDYP-------------DFASRVAEMVARKEVEFGVLAAGSGIGM 95 (179)
T ss_dssp HHHHHHHHHTCTTEEEEECSCSSS-------SC--CCHH-------------HHHHHHHHHHHTTSSSEEEEEESSSHHH
T ss_pred HHHHHHHHhcCCCCeEEEcCCCCC-------CC--CCHH-------------HHHHHHHHHHHcCCCCEEEEEccCcHHH
Confidence 345555543 478899877432 13 3322 455555554 24557799999999765
Q ss_pred HHHHHH
Q 031788 109 LHATAD 114 (153)
Q Consensus 109 ~~~~~~ 114 (153)
..++..
T Consensus 96 sIaANK 101 (179)
T 3k7p_A 96 SIAANK 101 (179)
T ss_dssp HHHHHT
T ss_pred hhHhhc
Confidence 655554
No 421
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=20.60 E-value=72 Score=21.36 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=25.7
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
+.+++.+++...+|.-...+++.++..|.+ |.....
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~-V~~~~~ 71 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGAR-IYTTAG 71 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCE-EEEEES
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCE-EEEEeC
Confidence 456777777765777777888888888974 665543
No 422
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=20.58 E-value=1.1e+02 Score=19.06 Aligned_cols=10 Identities=10% Similarity=-0.100 Sum_probs=4.1
Q ss_pred HHHHHHCCcc
Q 031788 112 TADLLGAGFK 121 (153)
Q Consensus 112 ~~~L~~~G~~ 121 (153)
...+....++
T Consensus 51 ~~~l~~~~~d 60 (153)
T 3hv2_A 51 LQLLASREVD 60 (153)
T ss_dssp HHHHHHSCCS
T ss_pred HHHHHcCCCC
Confidence 3344444433
No 423
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=20.55 E-value=1.1e+02 Score=21.38 Aligned_cols=27 Identities=19% Similarity=0.191 Sum_probs=16.7
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
++.++|...++.-...+++.|.+.|++
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~ 38 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGAS 38 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE
Confidence 455555555666666667777767764
No 424
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=20.53 E-value=1.6e+02 Score=23.13 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=26.7
Q ss_pred HHHHHHHhh--ccCCCeEEEEeCCCccHHHHHHHHHH----CCcc
Q 031788 83 DFLKKVRSL--CKEEDRLVVGCQSGARSLHATADLLG----AGFK 121 (153)
Q Consensus 83 ~~~~~~~~~--~~~~~~ivi~c~~g~~a~~~~~~L~~----~G~~ 121 (153)
.+.+.+.+. +.+++++++.+.+|..|..++..|.+ .|++
T Consensus 4 kv~~~i~~~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~ 48 (464)
T 3a2k_A 4 KVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQ 48 (464)
T ss_dssp HHHHHHHHTCSSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHcCCCCCCCEEEEEEcCcHHHHHHHHHHHHHHHHcCCe
Confidence 455555554 66778888888777777777766665 5765
No 425
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=20.52 E-value=1.1e+02 Score=21.56 Aligned_cols=27 Identities=15% Similarity=0.031 Sum_probs=15.2
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCcc
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFK 121 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~ 121 (153)
++.++|...++.-...+++.|.+.|++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~ 35 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGAS 35 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE
Confidence 344555544555556666666666654
No 426
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=20.42 E-value=2.4e+02 Score=20.01 Aligned_cols=59 Identities=12% Similarity=0.037 Sum_probs=36.9
Q ss_pred HHHHHHHhhccCCCeEEEEeCCC----ccHHHHHHHHHHCCccceeecccc--H-HHHHhCCCceec
Q 031788 83 DFLKKVRSLCKEEDRLVVGCQSG----ARSLHATADLLGAGFKHVSNFGGG--H-MAWVQNGLKVKA 142 (153)
Q Consensus 83 ~~~~~~~~~~~~~~~ivi~c~~g----~~a~~~~~~L~~~G~~~v~~l~gG--~-~~w~~~g~~~~~ 142 (153)
+..+.+.+....++.|++.+.+. .+.....+.+.+.|++ +.++.|= + .+....|.|...
T Consensus 84 ~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~-v~viPGiSs~~aa~a~~G~pl~~ 149 (259)
T 2e0n_A 84 ANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRDGLD-CSMTPGIPAFIAAGSAAGMPLAL 149 (259)
T ss_dssp GGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCC-EEEECCCCHHHHHHHHTTCCSBC
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHCCCC-EEEeCChhHHHHHHHhcCCCCcC
Confidence 34444444445678888887633 2355777888888976 7888763 2 234556877743
No 427
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=20.30 E-value=99 Score=22.97 Aligned_cols=18 Identities=39% Similarity=0.630 Sum_probs=12.9
Q ss_pred cCCCeEEEEeCCC-ccHHH
Q 031788 93 KEEDRLVVGCQSG-ARSLH 110 (153)
Q Consensus 93 ~~~~~ivi~c~~g-~~a~~ 110 (153)
....||||+|..| +|+..
T Consensus 233 ~~~~PIvVHCsaGvGRTGt 251 (307)
T 3s3e_A 233 AEQRPIVVHCSAGVGRSGT 251 (307)
T ss_dssp SCCSCEEEECSSSSHHHHH
T ss_pred CCCCCEEEEcCCCchHHHH
Confidence 4567999999966 46543
No 428
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=20.29 E-value=82 Score=22.30 Aligned_cols=37 Identities=22% Similarity=0.117 Sum_probs=24.4
Q ss_pred CCCeEEEEeCCC-ccHHHHHHHHHHCCccceeeccccH
Q 031788 94 EEDRLVVGCQSG-ARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 94 ~~~~ivi~c~~g-~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
...+|+++|.+. -||+.+...++.+.-+++.+...|.
T Consensus 80 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 80 PVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 346799999844 4788887777765434455555443
No 429
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=20.29 E-value=47 Score=24.11 Aligned_cols=43 Identities=19% Similarity=0.325 Sum_probs=31.4
Q ss_pred ChHHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 81 NPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 81 ~~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
.+++.+.+.+.+.++..++.||..+ .+-+.|...||. |.-..|
T Consensus 192 ~~~~l~~l~~~L~pGG~l~tysaa~----~vrr~L~~aGF~-v~~~~g 234 (257)
T 2qy6_A 192 TQNLFNAMARLARPGGTLATFTSAG----FVRRGLQEAGFT-MQKRKG 234 (257)
T ss_dssp CHHHHHHHHHHEEEEEEEEESCCBH----HHHHHHHHHTEE-EEEECC
T ss_pred CHHHHHHHHHHcCCCcEEEEEeCCH----HHHHHHHHCCCE-EEeCCC
Confidence 3468888888888899899998643 456678888998 554443
No 430
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=20.26 E-value=99 Score=22.64 Aligned_cols=17 Identities=35% Similarity=0.616 Sum_probs=12.7
Q ss_pred CCCeEEEEeCCC-ccHHH
Q 031788 94 EEDRLVVGCQSG-ARSLH 110 (153)
Q Consensus 94 ~~~~ivi~c~~g-~~a~~ 110 (153)
...+|+++|..| +|+..
T Consensus 211 ~~~PivVHCsaGvGRTGt 228 (286)
T 2ooq_A 211 EAGPIVVHCSAGAGRTGC 228 (286)
T ss_dssp TSCCEEEECSSSSHHHHH
T ss_pred CCCcEEEEeCCCCcHHHH
Confidence 568999999966 46543
No 431
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=20.25 E-value=1.1e+02 Score=21.31 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=20.5
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++.++|...++.-...+++.|.+.|++ |..+
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~-V~~~ 37 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGAT-VAAC 37 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEE
Confidence 455666655666777777778777865 5544
No 432
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=20.23 E-value=1.4e+02 Score=22.02 Aligned_cols=61 Identities=15% Similarity=0.095 Sum_probs=34.7
Q ss_pred ccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 70 YMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.+.++|.+.++.......+......+...|+-+.+|..+.-++...+..|++-+.++..+.
T Consensus 28 ~E~~~ptgS~K~R~a~~~l~~a~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~i~~p~~~ 88 (318)
T 2rkb_A 28 CENVQPSGSFKIRGIGHFCQEMAKKGCRHLVCSSGGNAGIAAAYAARKLGIPATIVLPEST 88 (318)
T ss_dssp EGGGSTTSBTTHHHHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHTCCEEEEECTTC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHcCCCEEEEECCchHHHHHHHHHHHcCCCEEEEECCCC
Confidence 3334444555533333333332233455555566777777788888889988555665554
No 433
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=20.22 E-value=1e+02 Score=22.09 Aligned_cols=31 Identities=10% Similarity=-0.112 Sum_probs=20.0
Q ss_pred CCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 95 EDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 95 ~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++.++|...++.-...+++.|.+.|++ |..+
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~-V~~~ 56 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIA 56 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEE
Confidence 455666655666677777777777765 5444
No 434
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=20.22 E-value=1.7e+02 Score=21.14 Aligned_cols=86 Identities=20% Similarity=0.259 Sum_probs=46.3
Q ss_pred ecHHHHHHHHh---C-C-CeEEecCChhhhhcCCCC-CcceeCccccccCCCCCCCChHHHHHHHhhccCCCeEEEEeCC
Q 031788 31 VDVRAAKNLLE---S-G-YGYLDVRTAEEFKEGHVD-AAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 104 (153)
Q Consensus 31 i~~~~~~~~~~---~-~-~~iIDvR~~~e~~~ghi~-ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivi~c~~ 104 (153)
++.+++.++++ + + ..+|||.+..|-....-- |+..+-+-...+.. ... +-+....+...++++ ++++|.+
T Consensus 134 l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t-~~~-d~~~~~~l~~~ip~~--~~vIaEs 209 (251)
T 1i4n_A 134 LTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDT-FEI-KKNVLWELLPLVPDD--TVVVAES 209 (251)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTT-CCB-CTTHHHHHGGGSCTT--SEEEEES
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCccccc-CCC-CHHHHHHHHHhCCCC--CEEEEeC
Confidence 34455555553 3 4 478999999987653222 44323222211110 111 113333444444444 4677889
Q ss_pred CccHHHHHHHHHHCCcc
Q 031788 105 GARSLHATADLLGAGFK 121 (153)
Q Consensus 105 g~~a~~~~~~L~~~G~~ 121 (153)
|..+..-+..+.+. ++
T Consensus 210 GI~t~edv~~~~~~-a~ 225 (251)
T 1i4n_A 210 GIKDPRELKDLRGK-VN 225 (251)
T ss_dssp CCCCGGGHHHHTTT-CS
T ss_pred CCCCHHHHHHHHHh-CC
Confidence 98877777788777 66
No 435
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=20.21 E-value=90 Score=21.61 Aligned_cols=26 Identities=4% Similarity=-0.001 Sum_probs=21.7
Q ss_pred ccCCCeEEEEeCCCccHHHHHHHHHH
Q 031788 92 CKEEDRLVVGCQSGARSLHATADLLG 117 (153)
Q Consensus 92 ~~~~~~ivi~c~~g~~a~~~~~~L~~ 117 (153)
+..+++|+++|.++..+..+.+.+..
T Consensus 149 IAGDDTIlVi~r~~~~a~~l~~~l~~ 174 (180)
T 3v4g_A 149 VAGDDTIFITPTLTITTEQLFKSVCE 174 (180)
T ss_dssp EECSSEEEEEECTTSCHHHHHHHHHH
T ss_pred EecCCEEEEEeCCHHHHHHHHHHHHH
Confidence 55689999999999888888887765
No 436
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=20.20 E-value=1.7e+02 Score=22.84 Aligned_cols=48 Identities=21% Similarity=0.106 Sum_probs=31.5
Q ss_pred HHHHHHHhh-ccCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 83 DFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 83 ~~~~~~~~~-~~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
++...+.+. ...+..+|+++.....+..+...+.+.|+..+++...++
T Consensus 230 d~~~~l~~~i~~s~a~vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s~~w 278 (479)
T 3sm9_A 230 SYDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASFTWVASDGW 278 (479)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEECTTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEcChHHHHHHHHHHHHhCCEEEEEEechh
Confidence 566665333 234455666666666677888888999998666666554
No 437
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=20.12 E-value=99 Score=21.43 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=23.1
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceee
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSN 125 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~ 125 (153)
+++.++|...++.-...+++.|.+.|++ |..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~ 36 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWW-VAS 36 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCE-EEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCE-EEE
Confidence 4566777766777788889999999976 544
No 438
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=20.12 E-value=99 Score=22.70 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=24.8
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
++++|+|...+|.-+..+++.|.+.|++ |..+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~ 39 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGAT-VKGY 39 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCe-EEEE
Confidence 3567788877888888999999999975 6544
No 439
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=20.11 E-value=1e+02 Score=21.60 Aligned_cols=32 Identities=19% Similarity=0.050 Sum_probs=23.0
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+++.++|...++.-...+++.|.+.|++ |..+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~ 42 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGAT-VAIA 42 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEE
Confidence 3566666666777788888888888875 5544
No 440
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=20.09 E-value=1.1e+02 Score=21.69 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=23.9
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeec
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 126 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l 126 (153)
+++.++|...++.-...+++.|.+.|++ |..+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~ 38 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSK-VIDL 38 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEE
Confidence 3566777766777888899999999975 5443
No 441
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=20.06 E-value=2.4e+02 Score=20.04 Aligned_cols=61 Identities=23% Similarity=0.320 Sum_probs=35.3
Q ss_pred HHHHHHHh-CCCeEEecCChhhhhcCCCCCcceeCccccccCCCCCCCChHHHHHHHhh--ccCCCeEEEEeCCCccHHH
Q 031788 34 RAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQSGARSLH 110 (153)
Q Consensus 34 ~~~~~~~~-~~~~iIDvR~~~e~~~ghi~ga~~i~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ivi~c~~g~~a~~ 110 (153)
+.+.++++ .+..++|+-+...... .+ . .|. ++....... -.+.+.-|++|++|.-...
T Consensus 23 ~~i~~~L~~~G~eV~D~G~~s~~d~----~s--~--DYP-----------d~a~~vA~~V~~g~~d~GIliCGTGiG~sI 83 (216)
T 2ppw_A 23 DSLKEATDKKGYQLFNYGMRGEEGE----SQ--L--TYV-----------QNGLMAAILLNTKAVDFVVTGCGTGVGAML 83 (216)
T ss_dssp HHHHHHHHHHTCEEEECSCCSCTTC----CC--C--CHH-----------HHHHHHHHHHHTTSCSEEEEEESSSHHHHH
T ss_pred HHHHHHHHHCCCEEEEeCCCCCCCC----CC--C--ChH-----------HHHHHHHHHHHcCCCCeEEEEcCCcHHHHH
Confidence 56677775 4689999966321100 12 2 221 455555544 2455789999999865555
Q ss_pred HHH
Q 031788 111 ATA 113 (153)
Q Consensus 111 ~~~ 113 (153)
++.
T Consensus 84 AAN 86 (216)
T 2ppw_A 84 ALN 86 (216)
T ss_dssp HHT
T ss_pred Hhh
Confidence 444
No 442
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination-DNA binding COM; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=20.06 E-value=75 Score=26.17 Aligned_cols=37 Identities=8% Similarity=-0.029 Sum_probs=30.6
Q ss_pred cCCCeEEEEeCCCccHHHHHHHHHHCCccceeeccccH
Q 031788 93 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 130 (153)
Q Consensus 93 ~~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~gG~ 130 (153)
.++.+++|+|+.-.........|...|+. +..++|++
T Consensus 414 ~~~~k~lIFs~~~~~~~~l~~~l~~~g~~-~~~l~G~~ 450 (644)
T 1z3i_X 414 TTSDKVVLVSNYTQTLDLFEKLCRNRRYL-YVRLDGTM 450 (644)
T ss_dssp HCCCEEEEEESCHHHHHHHHHHHHHHTCC-EEEECSSC
T ss_pred cCCCEEEEEEccHHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 36789999999877777888889999987 67788886
No 443
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=20.02 E-value=44 Score=23.31 Aligned_cols=28 Identities=21% Similarity=0.226 Sum_probs=18.6
Q ss_pred EEEeCCCccHHHHHHHHHHCCccceeeccc
Q 031788 99 VVGCQSGARSLHATADLLGAGFKHVSNFGG 128 (153)
Q Consensus 99 vi~c~~g~~a~~~~~~L~~~G~~~v~~l~g 128 (153)
+++|+.|..+..+++.|.+.|+ |.+++-
T Consensus 12 viI~G~G~~G~~la~~L~~~g~--v~vid~ 39 (234)
T 2aef_A 12 VVICGWSESTLECLRELRGSEV--FVLAED 39 (234)
T ss_dssp EEEESCCHHHHHHHHHSTTSEE--EEEESC
T ss_pred EEEECCChHHHHHHHHHHhCCe--EEEEEC
Confidence 4555666667777788877776 655543
No 444
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=20.00 E-value=2.2e+02 Score=21.05 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=27.5
Q ss_pred CCCeEEEEeCCCccHHHHHHHHHHCCccceeecc
Q 031788 94 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 127 (153)
Q Consensus 94 ~~~~ivi~c~~g~~a~~~~~~L~~~G~~~v~~l~ 127 (153)
.+++++++..++.-...++..|...|.+ |++.+
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAt-Vtv~~ 181 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYT-VSVCH 181 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCE-EEEEC
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCe-EEEEe
Confidence 7889999987877888999999999976 76664
Done!