BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031791
(153 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DGDG IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADGDG ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 FSTFHLA 80
F A
Sbjct: 141 FVQMMTA 147
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 119 bits (299), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDAD 136
+A D +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D D
Sbjct: 71 M-MARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 137 GDGHVNFEEFKKMMT 151
GDG VN+EEF MMT
Sbjct: 130 GDGQVNYEEFVTMMT 144
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 79 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 74 FST 76
F T
Sbjct: 139 FVT 141
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 119 bits (298), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DGDG IDF EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 371
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 372 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 11 YLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
Y S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++
Sbjct: 379 YTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 71 FKEF 74
++EF
Sbjct: 439 YEEF 442
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADGDG ++F EF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 371
Query: 149 MMTR 152
MM R
Sbjct: 372 MMAR 375
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 119 bits (298), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DGDG IDF EF T
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 371 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 430
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 431 DGDGQVNYEEFVQMMT 446
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 11 YLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
Y S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++
Sbjct: 378 YTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 437
Query: 71 FKEF 74
++EF
Sbjct: 438 YEEF 441
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADGDG ++F EF
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 149 MMTR 152
MM R
Sbjct: 371 MMAR 374
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 119 bits (298), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DGDG IDF EF T
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 371 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 430
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 431 DGDGQVNYEEFVQMMT 446
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 11 YLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
Y S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++
Sbjct: 378 YTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 437
Query: 71 FKEF 74
++EF
Sbjct: 438 YEEF 441
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADGDG ++F EF
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 149 MMTR 152
MM R
Sbjct: 371 MMAR 374
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DGDG IDF EF T
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 371 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 430
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 431 DGDGQVNYEEFVQMMT 446
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADGDG ++F EF
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 149 MMTR 152
MM R
Sbjct: 371 MMAR 374
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 74 F 74
F
Sbjct: 441 F 441
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 119 bits (297), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV +++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEE 141
Query: 74 FSTFHLA 80
F A
Sbjct: 142 FVQMMTA 148
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 119 bits (297), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 74
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 75 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 134
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 135 DGDGQVNYEEFVQMMT 150
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 85 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 144
Query: 74 FSTFHLA 80
F A
Sbjct: 145 FVQMMTA 151
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 74
Query: 149 MMTR 152
MM R
Sbjct: 75 MMAR 78
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 119 bits (297), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-STF 77
++ F FDK+GDG I+ +EL V+RSL + EE++ ++ E+D DG+G I+F EF S
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 78 HLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADG 137
TD +ELK+AF ++D DQNG ISA+EL V+ LGEK + ++ MIK+ D DG
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG 132
Query: 138 DGHVNFEEFKKMM 150
DG VN+EEF KMM
Sbjct: 133 DGQVNYEEFVKMM 145
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 44/59 (74%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+E+++ F FDK+ +G ISA EL+ V+ +LG K + EEV++++ E D DGDG ++++EF
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 141
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + + K+AF L+D D +G I+ EL V++ L + + ++ +MI +VDADG+G +
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 143 FEEFKKMMTR 152
F+EF +M +
Sbjct: 65 FDEFLSLMAK 74
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 119 bits (297), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 FSTFHLA 80
F A
Sbjct: 142 FVQMMTA 148
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 119 bits (297), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 73 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 132
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 133 DGDGQVNYEEFVQMMT 148
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 83 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 142
Query: 74 FSTFHLA 80
F A
Sbjct: 143 FVQMMTA 149
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
Query: 149 MMTR 152
MM R
Sbjct: 73 MMAR 76
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 FSTFHLA 80
F A
Sbjct: 142 FVQMMTA 148
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 74 FSTFHLA 80
F A
Sbjct: 139 FVQMMTA 145
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 149 MMTR 152
MM R
Sbjct: 69 MMAR 72
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 FSTFHLA 80
F A
Sbjct: 142 FVQMMTA 148
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 FSTFHLA 80
F A
Sbjct: 141 FVQMMTA 147
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 74 FSTFHLA 80
F A
Sbjct: 139 FVQMMTA 145
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 149 MMTR 152
MM R
Sbjct: 69 MMAR 72
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 77 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 136
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 137 DGDGQVNYEEFVQMMT 152
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 87 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 146
Query: 74 FSTFHLA 80
F A
Sbjct: 147 FVQMMTA 153
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Query: 149 MMTR 152
MM R
Sbjct: 77 MMAR 80
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 FSTFHLA 80
F A
Sbjct: 141 FVQMMTA 147
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 74 F 74
F
Sbjct: 139 F 139
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 149 MMTR 152
MM R
Sbjct: 69 MMAR 72
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 68 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 127
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 128 DGDGQVNYEEFVQMMT 143
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 78 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 137
Query: 74 FSTFHLA 80
F A
Sbjct: 138 FVQMMTA 144
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 149 MMTR 152
MM R
Sbjct: 68 MMAR 71
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 FSTFHLA 80
F A
Sbjct: 142 FVQMMTA 148
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 67 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 126
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 127 DGDGQVNYEEFVQMMT 142
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 77 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 136
Query: 74 FSTFHLA 80
F A
Sbjct: 137 FVQMMTA 143
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 149 MMTR 152
MM R
Sbjct: 67 MMAR 70
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 70 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 129
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 130 DGDGQVNYEEFVQMMT 145
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 80 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 139
Query: 74 F 74
F
Sbjct: 140 F 140
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 149 MMTR 152
MM R
Sbjct: 70 MMAR 73
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 372 MMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 74 F 74
F
Sbjct: 442 F 442
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 149 MMTR 152
MM R
Sbjct: 372 MMAR 375
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF E
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 74 FSTFHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F TD +ELK+AF ++D DQNG ISA EL V+ LGEK + ++ MI++
Sbjct: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 133 VDADGDGHVNFEEFKKMM 150
D DGDG +N+EEF K+M
Sbjct: 129 ADVDGDGQINYEEFVKVM 146
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFE 144
D E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 145 EFKKMMTR 152
EF +M R
Sbjct: 68 EFLNLMAR 75
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 118 bits (295), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF MMT
Sbjct: 132 DGDGQVNYEEFVTMMT 147
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 FST 76
F T
Sbjct: 142 FVT 144
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 118 bits (295), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF MMT
Sbjct: 132 DGDGQVNYEEFVTMMT 147
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 FST 76
F T
Sbjct: 142 FVT 144
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF MMT
Sbjct: 131 DGDGQVNYEEFVTMMT 146
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 FST 76
F T
Sbjct: 141 FVT 143
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF MMT
Sbjct: 131 DGDGQVNYEEFVTMMT 146
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 FSTFHLA 80
F T A
Sbjct: 141 FVTMMTA 147
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 372 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 11 YLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
Y S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++
Sbjct: 379 YTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 438
Query: 71 FKEF 74
++EF
Sbjct: 439 YEEF 442
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 149 MMTR 152
MM R
Sbjct: 372 MMAR 375
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 74 F 74
F
Sbjct: 442 F 442
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 149 MMTR 152
MM R
Sbjct: 372 MMAR 375
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
Query: 77 FHLAGGS-TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 373 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 432
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 433 DGDGQVNYEEFVQMMT 448
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 442
Query: 74 F 74
F
Sbjct: 443 F 443
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
Query: 149 MMTR 152
MM R
Sbjct: 373 MMAR 376
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DGDG IDF EF
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLI 362
Query: 77 FHLAGGS-TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 363 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 422
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 423 DGDGQVNYEEFVQMMT 438
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADGDG ++F EF
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLI 362
Query: 149 MMTR 152
MM R
Sbjct: 363 MMAR 366
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 432
Query: 74 F 74
F
Sbjct: 433 F 433
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 74 F 74
F
Sbjct: 442 F 442
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 149 MMTR 152
MM R
Sbjct: 372 MMAR 375
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 338 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 397
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 398 DGDGQVNYEEFVQMMT 413
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 74 F 74
F
Sbjct: 408 F 408
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 149 MMTR 152
MM R
Sbjct: 338 MMAR 341
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 338 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 397
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 398 DGDGQVNYEEFVQMMT 413
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 74 F 74
F
Sbjct: 408 F 408
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 149 MMTR 152
MM R
Sbjct: 338 MMAR 341
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 117 bits (293), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 335 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 394
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 395 DGDGQVNYEEFVQMMT 410
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 345 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 404
Query: 74 F 74
F
Sbjct: 405 F 405
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 149 MMTR 152
MM R
Sbjct: 335 MMAR 338
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 117 bits (293), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF MMT
Sbjct: 132 DGDGQVNYEEFVTMMT 147
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEE 141
Query: 74 FST 76
F T
Sbjct: 142 FVT 144
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 117 bits (292), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E + DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 140
Query: 74 FSTFHLA 80
F A
Sbjct: 141 FVQMMTA 147
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-S 75
E ++ F FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF S
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
D +EL +AF ++D D NGLISA EL V+ LGEK + + MI++ D
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDGH+N+EEF +MM
Sbjct: 131 DGDGHINYEEFVRMMV 146
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 149 MMTR 152
+M R
Sbjct: 71 LMAR 74
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ + F FD++G+G ISA EL+ V+ +LG K + +EV ++ E D DGDG+I+++E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 74 F 74
F
Sbjct: 141 F 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-S 75
E ++ F FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF S
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
D +EL +AF ++D D NGLISA EL V+ LGEK + + MI++ D
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDGH+N+EEF +MM
Sbjct: 131 DGDGHINYEEFVRMMV 146
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 149 MMTR 152
+M R
Sbjct: 71 LMAR 74
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ + F FD++G+G ISA EL+ V+ +LG K + +EV ++ E D DGDG+I+++E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 74 F 74
F
Sbjct: 141 F 141
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGE + ++ MI++ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG + EEV ++ E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 74 FSTFHLA 80
F A
Sbjct: 142 FVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V+ LGE + ++ MI++ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +MMT
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG + EEV ++ E D DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 74 FSTFHLA 80
F A
Sbjct: 141 FVQMMTA 147
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF E
Sbjct: 9 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 74 FSTFHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F TD +ELK+AF ++D DQNG ISA EL V+ LGEK + ++ MI++
Sbjct: 69 FLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Query: 133 VDADGDGHVNFEEFKKMM 150
D DGDG +N++EF K+M
Sbjct: 129 ADVDGDGQINYDEFVKVM 146
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
+ D E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++
Sbjct: 6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 143 FEEFKKMMTR 152
F EF +M R
Sbjct: 66 FPEFLNLMAR 75
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 116 bits (291), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 89/135 (65%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDAD 136
++E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ + D
Sbjct: 67 MMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANID 126
Query: 137 GDGHVNFEEFKKMMT 151
GDG VN+EEF +MMT
Sbjct: 127 GDGQVNYEEFVQMMT 141
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 149 MMTR 152
MM R
Sbjct: 67 MMAR 70
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E + DGDG ++++EF
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
Query: 76 TFHLA 80
A
Sbjct: 138 QMMTA 142
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +ELK+AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 71 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 136 DGDGHVNFEEFKKMM 150
DGDG VN+EEF ++M
Sbjct: 131 DGDGQVNYEEFVQVM 145
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+++ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 81 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 74 FSTFHLA 80
F +A
Sbjct: 141 FVQVMMA 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 149 MMTR 152
+M R
Sbjct: 71 LMAR 74
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE-LH 111
E K D DGDG I KE T + G EL+D + D D NG I E L+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 112 AVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMT 151
+ +K+ + S ++ + D DG+G ++ E + +MT
Sbjct: 71 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT 110
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +ELK+AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 68 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 127
Query: 136 DGDGHVNFEEFKKMM 150
DGDG VN+EEF ++M
Sbjct: 128 DGDGQVNYEEFVQVM 142
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+++ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 78 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 137
Query: 74 FSTFHLA 80
F +A
Sbjct: 138 FVQVMMA 144
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 149 MMTR 152
+M R
Sbjct: 68 LMAR 71
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE-LH 111
E K D DGDG I KE T + G EL+D + D D NG I E L+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 112 AVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMT 151
+ +K+ + S ++ + D DG+G ++ E + +MT
Sbjct: 68 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT 107
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-S 75
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +M EID DG+G +DF EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG +SA EL V+ +LGEK S ++ MI+ D
Sbjct: 71 MMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADT 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF +++
Sbjct: 131 DGDGQVNYEEFVRVLV 146
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+E+R+ F FDK+G+G +SA EL+ V+ LG K S EEV ++ DTDGDG ++++EF
Sbjct: 83 EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 141
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +M+ ++D DG+G V+F EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I +E T + G EL+D D D NG + E
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 113 VL-KKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTR 152
++ +K+ + + ++ + D DG+G V+ E + +MTR
Sbjct: 71 MMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTR 111
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 113 bits (282), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD ++LK+AF ++D D NG ISA EL V+ LGEK + ++ MI++ D
Sbjct: 71 LMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 136 DGDGHVNFEEFKKMM 150
DGDG VN+EEF ++M
Sbjct: 131 DGDGQVNYEEFVQVM 145
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 149 MMTR 152
+M R
Sbjct: 71 LMAR 74
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +++++ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 81 SEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 74 FSTFHLA 80
F +A
Sbjct: 141 FVQVMMA 147
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE-LH 111
E K D DGDG I KE T + G EL+D + D D NG I E L+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 112 AVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMT 151
+ +K+ + S + + D DG+G ++ E + +MT
Sbjct: 71 LMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMT 110
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V RSLG + E++ ++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 71
Query: 77 FHLAGGS-TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V LGEK + ++ I++ D
Sbjct: 72 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADI 131
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF + T
Sbjct: 132 DGDGQVNYEEFVQXXT 147
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V +LG K + EEV + + E D DGDG ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEE 141
Query: 74 F 74
F
Sbjct: 142 F 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V RSLG + E++ ++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAGGS-TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V LGEK + ++ I++ D
Sbjct: 71 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF + T
Sbjct: 131 DGDGQVNYEEFVQXXT 146
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V +LG K + EEV + E D DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 74 F 74
F
Sbjct: 141 F 141
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ +L V+RSLG + E++ +++E+ DG+G IDF +F T
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLT 371
Query: 77 FHLAGGS-TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++ D NG ISA +L V+ LGEK + ++ MI++
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGI 431
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+E+F +MMT
Sbjct: 432 DGDGQVNYEQFVQMMT 447
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ +L V++ LG+ + + +MI +V ADG+G ++F +F
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLT 371
Query: 149 MMTR 152
MM R
Sbjct: 372 MMAR 375
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F F K+G+G ISA +L+ V+ +LG K + EEV ++ E DGDG +++++
Sbjct: 382 SEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQ 441
Query: 74 F 74
F
Sbjct: 442 F 442
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V RSLG + E++ ++E+D DG+G I+F EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLT 70
Query: 77 FHL-AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D NG ISA EL V LGEK + ++ I++ D
Sbjct: 71 XXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADI 130
Query: 136 DGDGHVNFEEFKKMMT 151
DGDG VN+EEF + T
Sbjct: 131 DGDGQVNYEEFVQXXT 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V +LG K + EEV + E D DGDG ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 74 F 74
F
Sbjct: 141 F 141
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+R+ F+ FD +G G I A ELK +R+LG + EE+K+++ +ID DG G IDF+EF
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQ 68
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
A G D +E+ AF L+D D+ G IS L V K+LGE + ++ MI + D
Sbjct: 69 MMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADR 128
Query: 136 DGDGHVNFEEFKKMMTRS 153
DGDG VN EEF ++M ++
Sbjct: 129 DGDGEVNEEEFFRIMKKT 146
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 81 GGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGH 140
G + + +E+++AFDL+D D +G I A EL ++ LG + ++ MI +D DG G
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 141 VNFEEFKKMMT 151
++FEEF +MMT
Sbjct: 61 IDFEEFLQMMT 71
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ K F FD + GKIS LK V + LG + EE++ ++DE D DGDG ++ +E
Sbjct: 79 SREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEE 138
Query: 74 F 74
F
Sbjct: 139 F 139
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+R+ F+ FD +G G I A ELK +R+LG + EE+K+++ EID DG G IDF+EF T
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
A G D +E+ AF L+D D +G I+ +L V K+LGE + ++ MI + D
Sbjct: 89 MMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADR 148
Query: 136 DGDGHVNFEEFKKMMTRS 153
+ D ++ +EF ++M ++
Sbjct: 149 NDDNEIDEDEFIRIMKKT 166
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 80 AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDG 139
G + + +E+++AFDL+D D +G I A EL ++ LG + ++ MI ++D DG G
Sbjct: 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSG 79
Query: 140 HVNFEEFKKMMT 151
++FEEF MMT
Sbjct: 80 TIDFEEFLTMMT 91
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ K F FD + G I+ +L+ V + LG + EE++ ++ E D + D ID E
Sbjct: 99 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 158
Query: 74 F 74
F
Sbjct: 159 F 159
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-S 75
E ++ F FDK+ +G IS+ EL V+RSLG S EV +M+EID DG+ I+F EF +
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
S D +EL +AF ++D + +GLISA EL VL +GEK + + +M+++V +
Sbjct: 71 LMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-S 129
Query: 136 DGDGHVNFEEFKKMMTR 152
DG G +N ++F ++++
Sbjct: 130 DGSGEINIQQFAALLSK 146
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S E+ + F FDKNGDG ISA ELK VL S+G K + EV ++ E+ +DG G I+ ++
Sbjct: 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQ 139
Query: 74 FSTF 77
F+
Sbjct: 140 FAAL 143
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-S 75
E ++ F FDK+ +G IS+ EL V+RSLG S EV +M+EID DG+ I+F EF +
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 71
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
S D +EL +AF ++D + +GLISA EL VL +GEK + + +M+++V +
Sbjct: 72 LMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-S 130
Query: 136 DGDGHVNFEEFKKMMTR 152
DG G +N ++F ++++
Sbjct: 131 DGSGEINIQQFAALLSK 147
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S E+ + F FDKNGDG ISA ELK VL S+G K + EV ++ E+ +DG G I+ ++
Sbjct: 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQ 140
Query: 74 FSTFHLAGGSTDGTK 88
F+ L+ GS+ GT+
Sbjct: 141 FAAL-LSKGSSTGTR 154
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-S 75
E ++ F FDK+ G ISA EL V+RSLG S EV +M+EID DG+ I+F EF +
Sbjct: 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLA 71
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
D +EL +AF ++D + +GLISA EL VL +GEK + + M+++V +
Sbjct: 72 LMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-S 130
Query: 136 DGDGHVNFEEFKKMMTR 152
DG G +N ++F ++++
Sbjct: 131 DGSGEINIKQFAALLSK 147
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S E+ + F FDKNGDG ISA ELK VL S+G K + EV ++ E+ +DG G I+ K+
Sbjct: 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SDGSGEINIKQ 140
Query: 74 FSTF 77
F+
Sbjct: 141 FAAL 144
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 92.8 bits (229), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E + F +FDK G GKI+ EL ++R+LG + E++ ++ E + + +G ++F EF
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCG 70
Query: 77 FHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
TD +E+++AF ++D D +G IS EL V+ LGEK + ++ MI++ D
Sbjct: 71 IMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADF 130
Query: 136 DGDGHVNFEEFKKMMTR 152
DGDG +N+EEF M+++
Sbjct: 131 DGDGMINYEEFVWMISQ 147
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 14/87 (16%)
Query: 2 AANNSNG----ANYLGSM----------DEVRKVFNKFDKNGDGKISADELKDVLRSLGS 47
A NN+NG + G M +E+R+ F FD++GDG IS EL+ V+ +LG
Sbjct: 55 AENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGE 114
Query: 48 KTSPEEVKRVMDEIDTDGDGYIDFKEF 74
K + EE+ ++ E D DGDG I+++EF
Sbjct: 115 KVTDEEIDEMIREADFDGDGMINYEEF 141
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E + F+ FD +G G IS EL V+R LG + EE+ +++E+D DG G IDF+EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 77 FHLAGGSTDG----TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
+ D +EL+D F ++D + +G I EL +L+ GE + +D +++K
Sbjct: 81 MMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 133 VDADGDGHVNFEEFKKMM 150
D + DG ++F+EF KMM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 75 FEEFLVMMVRQ 85
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ F FDKN DG I +EL ++LR+ G + E+++ +M + D + DG IDF E
Sbjct: 94 SEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 74 F 74
F
Sbjct: 154 F 154
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E + F+ FD +G G IS EL V+R LG + EE+ +++E+D DG G IDF+EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 77 FHLAGGSTDG----TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
+ D +EL D F ++D + +G I EL +L+ GE + +D +++K
Sbjct: 81 MMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 133 VDADGDGHVNFEEFKKMM 150
D + DG ++F+EF KMM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 75 FEEFLVMMVRQ 85
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ F FDKN DG I +EL ++LR+ G + E+++ +M + D + DG IDF E
Sbjct: 94 SEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 74 F 74
F
Sbjct: 154 F 154
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+R+ F+ FD +G G I ELK +R+LG + EE+K+++ EID +G G ++F +F T
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 77 FHLAGGSTDGTK-ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
S TK E+ AF L+D D+ G IS L V K+LGE + ++ MI + D
Sbjct: 67 VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADR 126
Query: 136 DGDGHVNFEEFKKMMTR 152
DGDG V+ +EF ++M +
Sbjct: 127 DGDGEVSEQEFLRIMKK 143
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+E+++AFDL+D D G I EL ++ LG + ++ MI ++D +G G +NF +F
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 148 KMMTR 152
+MT+
Sbjct: 66 TVMTQ 70
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+E+ K F FD + GKIS LK V + LG + EE++ ++DE D DGDG + +EF
Sbjct: 79 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 137
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 16 DEVRKVFNKFDKNGDGKIS-ADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+E++K+ ++ DK G GK++ D L + + + K + EE+ + D D G I FK
Sbjct: 42 EEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNL 101
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKK 116
G +EL++ D D D +G +S E ++KK
Sbjct: 102 KRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E + F+ FD +G G IS EL V+R LG + EE+ +++E+D DG G IDF+EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 77 FHLAGGSTDG----TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
+ D +EL + F ++D + +G I EL +L+ GE + +D +++K
Sbjct: 81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 133 VDADGDGHVNFEEFKKMM 150
D + DG ++F+EF KMM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 75 FEEFLVMMVRQ 85
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ F FDKN DG I +EL ++LR+ G + E+++ +M + D + DG IDF E
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 74 F 74
F
Sbjct: 154 F 154
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++E+R+ F +FDK+ DG I+ +L + +R++G + E+ + +I+ + G++DF +F
Sbjct: 24 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 83
Query: 75 STF---HLAGGSTD--GTKELKDAFDLYDMDQNGLISANELHAVLKK-LGEKSSLKDCVN 128
L + D G KEL+DAF +D + +G IS +EL ++K LG + +D
Sbjct: 84 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEE 143
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+I+ VD +GDG V+FEEF +MM+R
Sbjct: 144 IIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++E+R+ F +FDK+ DG I+ +L + +R++G + E+ + +I+ + G++DF +F
Sbjct: 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 69
Query: 75 STF---HLAGGSTD--GTKELKDAFDLYDMDQNGLISANELHAVLKK-LGEKSSLKDCVN 128
L + D G KEL+DAF +D + +G IS +EL ++K LG + +D
Sbjct: 70 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEE 129
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+I+ VD +GDG V+FEEF +MM+R
Sbjct: 130 IIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E + F+ FD +G G IS EL V+R LG + EE+ +++E+D DG G IDF+EF
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 77 FHLAGGSTDG----TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
+ D +EL + F ++D + +G I EL +L+ GE + +D +++K
Sbjct: 78 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 137
Query: 133 VDADGDGHVNFEEFKKMM 150
D + DG ++F+EF KMM
Sbjct: 138 SDKNNDGRIDFDEFLKMM 155
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 71
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 72 FEEFLVMMVRQ 82
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ F FDKN DG I +EL ++LR+ G + E+++ +M + D + DG IDF E
Sbjct: 91 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 150
Query: 74 F 74
F
Sbjct: 151 F 151
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E + F+ FD +G G IS EL V+R LG + EE+ +++E+D DG G IDF+EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 77 FHLAGGSTDG----TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
+ D +EL + F ++D + +G I EL +L+ GE +D +++K
Sbjct: 81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKD 140
Query: 133 VDADGDGHVNFEEFKKMM 150
D + DG ++F+EF KMM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 75 FEEFLVMMVRQ 85
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ F FDKN DG I +EL ++LR+ G E+++ +M + D + DG IDF E
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 74 F 74
F
Sbjct: 154 F 154
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++E+R+ F +FDK+ DG I+ +L + +R++G + E+ + +I+ + G++DF +F
Sbjct: 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 69
Query: 75 STF---HLAGGSTD--GTKELKDAFDLYDMDQNGLISANELHAVLKK-LGEKSSLKDCVN 128
L + D G KEL+DAF +D + +G IS +EL ++ LG + +D
Sbjct: 70 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEE 129
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+I+ VD +GDG V+FEEF +MM+R
Sbjct: 130 IIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Query: 4 NNSNGANYLGS--MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEI 61
+ +YL + E + F+ FD +G G IS EL V+R LG + EE+ +++E+
Sbjct: 3 QQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV 62
Query: 62 DTDGDGYIDFKEFSTFHLAGGSTDG----TKELKDAFDLYDMDQNGLISANELHAVLKKL 117
D DG G IDF+EF + D +EL + F ++D + +G I A EL + +
Sbjct: 63 DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRAS 122
Query: 118 GEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
GE + ++ +++K D + DG ++F+EF KMM
Sbjct: 123 GEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 71
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 72 FEEFLVMMVRQ 82
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Query: 4 NNSNGANYLGS--MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEI 61
+ +YL + E + F+ FD +G G IS EL V+R LG + EE+ +++E+
Sbjct: 3 QQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV 62
Query: 62 DTDGDGYIDFKEFSTFHLAGGSTDG----TKELKDAFDLYDMDQNGLISANELHAVLKKL 117
D DG G IDF+EF + D +EL + F ++D + +G I A EL + +
Sbjct: 63 DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRAS 122
Query: 118 GEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
GE + ++ +++K D + DG ++F+EF KMM
Sbjct: 123 GEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 71
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 72 FEEFLVMMVRQ 82
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 12/143 (8%)
Query: 18 VRKVFNKFD-KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
+ F F+ G G++S D++ +L LG + + +++++DE D G+G IDF +
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDF---DS 71
Query: 77 FHLAGGSTDG--------TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVN 128
F + G G +EL++AF LYD + NG IS + + +L +L E S +D
Sbjct: 72 FKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDA 131
Query: 129 MIKKVDADGDGHVNFEEFKKMMT 151
MI ++DADG G V+FEEF +MT
Sbjct: 132 MIDEIDADGSGTVDFEEFMGVMT 154
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 8 GANYLGS-------MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDE 60
GA +LG E+R+ F +DK G+G IS D ++++L L S E++ ++DE
Sbjct: 76 GARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDE 135
Query: 61 IDTDGDGYIDFKEF 74
ID DG G +DF+EF
Sbjct: 136 IDADGSGTVDFEEF 149
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 83 STDGTKELKDAF-DLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHV 141
S++ K L+ AF D + +G +S +++ +L+ LG + + +I + D G+G +
Sbjct: 8 SSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDI 67
Query: 142 NFEEFKKMMTR 152
+F+ FK + R
Sbjct: 68 DFDSFKIIGAR 78
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-S 75
E ++ F FDK+ +G IS+ EL V+RSLG S EV +M+EID DG+ I+F EF +
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEK 120
S D +EL +AF ++D + +GLISA EL VL +GEK
Sbjct: 71 LMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 115
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D NG IS++EL V++ LG S + +++ ++D DG+ + F EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 149 MMTR 152
+M+R
Sbjct: 71 LMSR 74
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVK 55
S E+ + F FDKNGDG ISA ELK VL S+G K + E++
Sbjct: 81 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
D++ ++F +FD NGDGKIS EL D LR+LGS TS +EV+R+M EIDTDGDG+IDF EF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGS-TSADEVQRMMAEIDTDGDGFIDFNEFI 61
Query: 76 TF 77
+F
Sbjct: 62 SF 63
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+++ F +D + +G IS +EL L+ LG S+ + M+ ++D DGDG ++F EF
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSA-DEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
D++ ++F +FD NGDGKIS EL D LR+LGS TS +EV+R+M EIDTDGDG+IDF EF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGS-TSADEVQRMMAEIDTDGDGFIDFNEFI 60
Query: 76 TF 77
+F
Sbjct: 61 SF 62
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+++ F +D + +G IS +EL L+ LG S+ + M+ ++D DGDG ++F EF
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSA-DEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTD---- 85
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF + D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 86 GTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
+EL D F ++D + +G I +EL +L+ GE + D ++K D + DG ++++E
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 146 FKKMM 150
F + M
Sbjct: 153 FLEFM 157
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ +F +DKN DG I DELK +L++ G + ++++ +M + D + DG ID+ E
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 74 FSTF 77
F F
Sbjct: 153 FLEF 156
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDG--- 86
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF + D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 87 -TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
+EL D F ++D + +G I EL +L+ GE + D ++K D + DG ++++E
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 146 FKKMM 150
F + M
Sbjct: 153 FLEFM 157
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+E+ +F FDKN DG I +ELK +L++ G + ++++ +M + D + DG ID+ EF
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 76 TF 77
F
Sbjct: 155 EF 156
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTD---- 85
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF + D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 86 GTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
+EL D F ++D + +G I EL +L+ GE + D ++K D + DG ++++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 146 FKKMM 150
F + M
Sbjct: 153 FLEFM 157
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ +F FDKN DG I +ELK +L++ G + ++++ +M + D + DG ID+ E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 74 FSTF 77
F F
Sbjct: 153 FLEF 156
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTD---- 85
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF + D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 86 GTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
+EL D F ++D + +G I +EL +L+ GE + D ++K D + DG ++++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 146 FKKMM 150
+ + M
Sbjct: 153 WLEFM 157
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ +F FDKN DG I DELK +L++ G + ++++ +M + D + DG ID+ E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 74 FSTF 77
+ F
Sbjct: 153 WLEF 156
Score = 32.3 bits (72), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 16 DEVRKVFNKFDKNGDGKISADE-LKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYIDF 71
+E++++ ++ D++G G + DE L ++RS+ + S EE+ + D + DGYID
Sbjct: 55 EELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDL 114
Query: 72 KEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLK 115
E A G T ++++ D + +G I +E +K
Sbjct: 115 DELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMK 158
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDG--- 86
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF + D
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 87 -TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
+EL D F ++D + +G I EL +L+ GE + D ++K D + DG ++++E
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 146 FKKMM 150
F + M
Sbjct: 153 FLEFM 157
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM R
Sbjct: 79 VMMVRC 84
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+E+ +F FDKN DG I +ELK +L++ G + ++++ +M + D + DG ID+ EF
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 76 TF 77
F
Sbjct: 155 EF 156
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTD---- 85
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF + D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 86 GTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
+EL D F + D + +G I +EL +L+ GE + D ++K D + DG ++++E
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 146 FKKMM 150
F + M
Sbjct: 153 FLEFM 157
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ +F DKN DG I DELK +L++ G + ++++ +M + D + DG ID+ E
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 74 FSTF 77
F F
Sbjct: 153 FLEF 156
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHL 79
++F +FD NGDGKIS+ EL D L++LGS T P+EV+R+M EIDTDGDG+I F EF+ F
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGSVT-PDEVRRMMAEIDTDGDGFISFDEFTDFAR 73
Query: 80 A 80
A
Sbjct: 74 A 74
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 94 FDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
F +D + +G IS++EL LK LG + + M+ ++D DGDG ++F+EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGSVTP-DEVRRMMAEIDTDGDGFISFDEF 68
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 12 LGSM--DEVRKVFNKFDKNGDGKISADELKDVLRS 44
LGS+ DEVR++ + D +GDG IS DE D R+
Sbjct: 40 LGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
TD +ELK+AF ++D DQNG ISA+EL V+ LGEK + ++ MIK+ D DGDG VN+
Sbjct: 5 TDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNY 64
Query: 144 EEFKKMM 150
EEF KMM
Sbjct: 65 EEFVKMM 71
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 44/59 (74%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+E+++ F FDK+ +G ISA EL+ V+ +LG K + EEV++++ E D DGDG ++++EF
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
S D++++ F FDK+ DGK+S +EL LRSLG + E+ + +++ D
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAK---EFDLA 58
Query: 73 EFSTFHLAG--GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
F T + T+ +KE+ DAF D + NG I EL +L LG+ + + ++
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELM 118
Query: 131 KKVDADGDGHVNFEEFKKMMT 151
K+V GDG +N+E F M+
Sbjct: 119 KEVSVSGDGAINYESFVDMLV 139
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+ F DK G+G I EL+ +L +LG + EV+ +M E+ GDG I+++ F
Sbjct: 77 EMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVD 136
Query: 77 FHLAG 81
+ G
Sbjct: 137 MLVTG 141
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
T ++++ F ++D D +G +S EL + L+ LG K+ +N IK G +N
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLG-KNPTNAELNTIK-------GQLNA 52
Query: 144 EEF 146
+EF
Sbjct: 53 KEF 55
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++F +FD NGDGKISA EL + L++LGS T P+EVK +M EIDTDGDG+I F+EF+
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTLGSIT-PDEVKHMMAEIDTDGDGFISFQEFTD 68
Query: 77 FHLA 80
F A
Sbjct: 69 FGRA 72
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 94 FDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
F +D + +G ISA EL LK LG + + +M+ ++D DGDG ++F+EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGSITP-DEVKHMMAEIDTDGDGFISFQEF 66
Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 2 AANNSNGANYLGSM--DEVRKVFNKFDKNGDGKISADELKDVLRS 44
AA LGS+ DEV+ + + D +GDG IS E D R+
Sbjct: 28 AAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEFTDFGRA 72
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTD---- 85
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF + D
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 86 GTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
+EL D F ++D + +G I +EL +L+ GE + D ++K D + DG ++++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 146 FKKMM 150
+ M
Sbjct: 153 XLEFM 157
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ +F FDKN DG I DELK +L++ G + ++++ +M + D + DG ID+ E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 74 FSTF 77
F
Sbjct: 153 XLEF 156
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 19/143 (13%)
Query: 16 DEVRKV---FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
DE++++ F K D + G +S +E SL V+RV+D DTDG+G +DFK
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVDFK 59
Query: 73 EF----STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLG----EKSSLK 124
EF S F + G D ++L+ AF +YDMD++G IS EL VLK + + + L+
Sbjct: 60 EFIEGVSQFSVKG---DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 116
Query: 125 DCVN-MIKKVDADGDGHVNFEEF 146
V+ I D DGDG ++FEEF
Sbjct: 117 QIVDKTIINADKDGDGRISFEEF 139
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 19/143 (13%)
Query: 16 DEVRKV---FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
DE++++ F K D + G +S +E SL V+RV+D DTDG+G +DFK
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVDFK 73
Query: 73 EF----STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLG----EKSSLK 124
EF S F + G D ++L+ AF +YDMD++G IS EL VLK + + + L+
Sbjct: 74 EFIEGVSQFSVKG---DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 130
Query: 125 DCVN-MIKKVDADGDGHVNFEEF 146
V+ I D DGDG ++FEEF
Sbjct: 131 QIVDKTIINADKDGDGRISFEEF 153
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 19/143 (13%)
Query: 16 DEVRKV---FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
DE++++ F K D + G +S +E SL V+RV+D DTDG+G +DFK
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVDFK 72
Query: 73 EF----STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLG----EKSSLK 124
EF S F + G D ++L+ AF +YDMD++G IS EL VLK + + + L+
Sbjct: 73 EFIEGVSQFSVKG---DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 129
Query: 125 DCVN-MIKKVDADGDGHVNFEEF 146
V+ I D DGDG ++FEEF
Sbjct: 130 QIVDKTIINADKDGDGRISFEEF 152
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 19/143 (13%)
Query: 16 DEVRKV---FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
DE++++ F K D + G +S +E SL V+RV+D DTDG+G +DFK
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 73 EF----STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLG----EKSSLK 124
EF S F + G D ++L+ AF +YDMD++G IS EL VLK + + + L+
Sbjct: 59 EFIEGVSQFSVKG---DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 115
Query: 125 DCVN-MIKKVDADGDGHVNFEEF 146
V+ I D DGDG ++FEEF
Sbjct: 116 QIVDKTIINADKDGDGRISFEEF 138
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF--S 75
++++F D + G I+ DELKD L+ +GS+ E+K +MD D D G ID+ EF +
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
T HL + + L AF +D D +G I+ +E+ K G D +MIK++D
Sbjct: 72 TVHL--NKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHID--DMIKEIDQ 127
Query: 136 DGDGHVNFEEFKKMMTR 152
D DG +++ EF MM +
Sbjct: 128 DNDGQIDYGEFAAMMRK 144
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
F+ FDK+G G I+ DE++ + G + ++ EID D DG ID+ EF+
Sbjct: 87 AFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144
Query: 81 GGSTDG--------TKELKDAFDLYDMDQNGLI 105
G T L+DA L D N +I
Sbjct: 145 RKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVI 177
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFE 144
D +ELK+AF ++D DQNG ISA+EL V+ LGEK + ++ MIK+ D DGDG VN+E
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 145 EFKKMM 150
EF KMM
Sbjct: 61 EFVKMM 66
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 44/59 (74%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+E+++ F FDK+ +G ISA EL+ V+ +LG K + EEV++++ E D DGDG ++++EF
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+ + F+ FD N DG + ELK +++LG + E+ ++DE D++G + ++
Sbjct: 24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM---KYDD 80
Query: 77 FHLAGGS----TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F++ G D E+K AF L+D D G IS L V K+LGE + ++ MI++
Sbjct: 81 FYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEE 140
Query: 133 VDADGDGHVNFEEFKKMMTRS 153
D DGDG +N EF + T S
Sbjct: 141 FDLDGDGEINENEFIAICTDS 161
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+DE+++ F FD + GKIS L+ V + LG + EE++ +++E D DGDG I+ E
Sbjct: 94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENE 153
Query: 74 F 74
F
Sbjct: 154 F 154
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 40/63 (63%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+E+ +AF L+DM+ +G + +EL +K LG + ++ +++I + D++G + +++F
Sbjct: 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFY 82
Query: 148 KMM 150
+M
Sbjct: 83 IVM 85
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 16/155 (10%)
Query: 12 LGSMDEVRK---VFNKFDKNGDGKISADEL----KDVLRSLGSKTS-------PEEVKRV 57
L S DE ++ +F+K DKNGDG++ EL K+++R G S EV +V
Sbjct: 328 LTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQV 387
Query: 58 MDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL 117
+D +D D +GYI++ EF T + + + L+ AF ++D D +G IS+ EL +
Sbjct: 388 LDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVS 447
Query: 118 GEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTR 152
S V + +VD + DG V+F+EF++M+ +
Sbjct: 448 DVDSETWKSV--LSEVDKNNDGEVDFDEFQQMLLK 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 16/155 (10%)
Query: 12 LGSMDEVRK---VFNKFDKNGDGKISADEL----KDVLRSLGSKTS-------PEEVKRV 57
L S DE ++ +F+K DKNGDG++ EL K+++R G S EV +V
Sbjct: 351 LTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQV 410
Query: 58 MDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL 117
+D +D D +GYI++ EF T + + + L+ AF ++D D +G IS+ EL +
Sbjct: 411 LDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVS 470
Query: 118 GEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTR 152
S V + +VD + DG V+F+EF++M+ +
Sbjct: 471 DVDSETWKSV--LSEVDKNNDGEVDFDEFQQMLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 16/155 (10%)
Query: 12 LGSMDEVRK---VFNKFDKNGDGKISADEL----KDVLRSLGSKTS-------PEEVKRV 57
L S DE ++ +F+K DKNGDG++ EL K+++R G S EV +V
Sbjct: 352 LTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQV 411
Query: 58 MDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL 117
+D +D D +GYI++ EF T + + + L+ AF ++D D +G IS+ EL +
Sbjct: 412 LDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVS 471
Query: 118 GEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTR 152
S V + +VD + DG V+F+EF++M+ +
Sbjct: 472 DVDSETWKSV--LSEVDKNNDGEVDFDEFQQMLLK 504
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 17/157 (10%)
Query: 9 ANYLGSMDEVRK---VFNKFDKNGDGKISADELKDVLRSLGSKTS-----PE---EVKRV 57
A+ L S +E ++ +F DKNGDG++ EL D L + P+ EV +
Sbjct: 53 ASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAI 112
Query: 58 MDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAV--LK 115
+ D D +GYID+ EF T + S +L+ AF +D D NG IS +EL +V L
Sbjct: 113 LGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLD 172
Query: 116 KLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTR 152
L K+ MI +D++ DG V+FEEF KM+ +
Sbjct: 173 HLESKT----WKEMISGIDSNNDGDVDFEEFCKMIQK 205
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D DGDG VN+
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 144 EEFKKMMT 151
EEF +MMT
Sbjct: 61 EEFVQMMT 68
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 74 FSTFHLA 80
F A
Sbjct: 63 FVQMMTA 69
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFE 144
D +ELK+AF ++D DQNG ISA EL V+ LGEK + ++ MI++ D DGDG +N+E
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 145 EFKKMM 150
EF K+M
Sbjct: 61 EFVKVM 66
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+++ F FDK+ +G ISA EL+ V+ +LG K + EEV ++ E D DGDG I+++E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 74 FSTFHLA 80
F +A
Sbjct: 62 FVKVMMA 68
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D DGDG VN+
Sbjct: 2 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 61
Query: 144 EEFKKMMT 151
EEF +MMT
Sbjct: 62 EEFVQMMT 69
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 74 FSTFHLA 80
F A
Sbjct: 64 FVQMMTA 70
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D DGDG VN+
Sbjct: 4 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 63
Query: 144 EEFKKMMT 151
EEF +MMT
Sbjct: 64 EEFVQMMT 71
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 74 FSTFHLA 80
F A
Sbjct: 66 FVQMMTA 72
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D DGDG VN+
Sbjct: 5 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 64
Query: 144 EEFKKMMT 151
EEF +MMT
Sbjct: 65 EEFVQMMT 72
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 74 FSTFHLA 80
F A
Sbjct: 67 FVQMMTA 73
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+ + F+ FD N DG + ELK ++LG + E+ ++DE D++G ++
Sbjct: 24 EIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRH---LXKYDD 80
Query: 77 FHLAGGS----TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F++ G D E+K AF L+D D G IS L V K+LGE + ++ I++
Sbjct: 81 FYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEE 140
Query: 133 VDADGDGHVNFEEFKKMMTRS 153
D DGDG +N EF + T S
Sbjct: 141 FDLDGDGEINENEFIAICTDS 161
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+DE+++ F FD + GKIS L+ V + LG + EE++ ++E D DGDG I+ E
Sbjct: 94 PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENE 153
Query: 74 F 74
F
Sbjct: 154 F 154
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 35/59 (59%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+E+ +AF L+D + +G + +EL K LG + ++ +++I + D++G +++F
Sbjct: 23 QEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDF 81
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 17/157 (10%)
Query: 9 ANYLGSMDEVRK---VFNKFDKNGDGKISADELKDVLRSL-GSKTSPEEVKRVMDEIDT- 63
A+ L S +E ++ +F DKNGDG++ EL D L G + + ++ ++ E+D
Sbjct: 336 ASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAI 395
Query: 64 ------DGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAV--LK 115
D +GYID+ EF T + S +L+ AF +D D NG IS +EL +V L
Sbjct: 396 LGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLD 455
Query: 116 KLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTR 152
L K+ MI +D++ DG V+FEEF KM+ +
Sbjct: 456 HLESKT----WKEMISGIDSNNDGDVDFEEFCKMIQK 488
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFE 144
D +EL +AF ++D D NGLISA EL V+ LGEK + + MI++ D DGDGH+N+E
Sbjct: 5 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
Query: 145 EFKKMMT 151
EF +MM
Sbjct: 65 EFVRMMV 71
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ + F FD++G+G ISA EL+ V+ +LG K + +EV ++ E D DGDG+I+++E
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEE 65
Query: 74 F 74
F
Sbjct: 66 F 66
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
+F + D NGDG +S +E+K + S + + ++ + ID DG+G ID EF+ F A
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 81 GGSTDGTKE---LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADG 137
D + E LK + L D D +G ++ E+ KK G + V+ I K DA+G
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFG----YEKVVDQIMKADANG 120
Query: 138 DGHVNFEEF 146
DG++ EEF
Sbjct: 121 DGYITLEEF 129
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEI---DTDGDGYIDFKEF 74
++ ++ D +GDGK++ +E+ + G ++V+D+I D +GDGYI +EF
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFG-------YEKVVDQIMKADANGDGYITLEEF 129
Query: 75 STFHL 79
F+L
Sbjct: 130 LAFNL 134
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMT 151
+ K++DA+GDG V++EE K ++
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVS 27
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
TD +E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D DGDG VN+
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 144 EEFKKMM 150
EEF +MM
Sbjct: 61 EEFVQMM 67
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 74 F 74
F
Sbjct: 63 F 63
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
TD +E+++AF + D D NG ISA EL V+ LGEK + ++ MI++ D DGDG VN+
Sbjct: 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 84
Query: 144 EEFKKMMT 151
EEF +MMT
Sbjct: 85 EEFVQMMT 92
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F DK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++E
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 74 FSTFHLA 80
F A
Sbjct: 87 FVQMMTA 93
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+E+++AF ++D D NG ISA EL V+ LGEK + ++ MI++ D DGDG VN+EEF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 148 KMMT 151
+MMT
Sbjct: 62 QMMT 65
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+E+R+ F FDK+G+G ISA EL+ V+ +LG K + EEV ++ E D DGDG ++++EF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 76 TFHLA 80
A
Sbjct: 62 QMMTA 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNF 143
TD +E+++AF ++D D NG ISA +L V+ LGEK + ++ MI++ D DGDG VN+
Sbjct: 3 TDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 62
Query: 144 EEFKKMMT 151
E+F +MMT
Sbjct: 63 EDFVQMMT 70
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+R+ F FDK+G+G ISA +L+ V+ +LG K + EEV ++ E D DGDG +++++
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 74 FSTFHLA 80
F A
Sbjct: 65 FVQMMTA 71
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+R+ F+ FD +G G I ELK R+LG + EE+K+ + EID +G G +F +F T
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLT 91
Query: 77 FHLAGGSTDGTK-ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDA 135
S TK E+ AF L+D D+ G IS L V K+LGE + ++ I + D
Sbjct: 92 VXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADR 151
Query: 136 DGDGHVNFEEFKKMMTRS 153
DGDG V+ +EF ++ ++
Sbjct: 152 DGDGEVSEQEFLRIXKKT 169
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ +E+ K F FD + GKIS LK V + LG + EE++ +DE D DGDG + +E
Sbjct: 102 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQE 161
Query: 74 F 74
F
Sbjct: 162 F 162
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+E+++AFDL+D D G I EL + LG + ++ I ++D +G G NF +F
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFL 90
Query: 148 KMMTR 152
+ T+
Sbjct: 91 TVXTQ 95
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 17 EVRKVFNKFDKNGDGKISADEL---KDVLRSLGS-----KTSPEEVKRVMDEIDTDGDGY 68
E+ +F K DKNGDG++ EL +VLR+ + K EEV ++ E+D D +GY
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGY 415
Query: 69 IDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAV--LKKLGEKSSLKDC 126
I++ EF + + + L+ AF+L+D D++G I+ EL + L + EK+
Sbjct: 416 IEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKT----W 471
Query: 127 VNMIKKVDADGDGHVNFEEFKKMMTR 152
+++ + D + D ++F+EF MM +
Sbjct: 472 NDVLGEADQNKDNMIDFDEFVSMMHK 497
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 12 LGSMDEVRKVFNKFDKNGDGKISADELKDV--LRSLGSKTSPEEVKRVMDEIDTDGDGYI 69
L S + +R+ FN FD + GKI+ +EL ++ L S+ KT + V+ E D + D I
Sbjct: 431 LFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWND----VLGEADQNKDNMI 486
Query: 70 DFKEFST 76
DF EF +
Sbjct: 487 DFDEFVS 493
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 16/155 (10%)
Query: 12 LGSMDEVRK---VFNKFDKNGDGKISADEL----KDVLRSLGSKTS-------PEEVKRV 57
L S DE ++ +F+K DKNGDG++ EL K++ R G S EV +V
Sbjct: 328 LTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQV 387
Query: 58 MDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL 117
+D +D D +GYI++ EF T + + L+ AF +D D +G IS+ EL +
Sbjct: 388 LDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVS 447
Query: 118 GEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTR 152
S V + +VD + DG V+F+EF++ + +
Sbjct: 448 DVDSETWKSV--LSEVDKNNDGEVDFDEFQQXLLK 480
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 12/145 (8%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++ +R +F D + G +S+ E+ D L+ +G + P ++ +V+ +ID++ G I + +F
Sbjct: 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDF 115
Query: 75 STFHLAGGSTDGTKELKD-----AFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV-- 127
+ D LK F +D+D NG IS EL + + ++ L D
Sbjct: 116 -----LAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAID 170
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTR 152
+++++VD +GDG ++F EF MM++
Sbjct: 171 SLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+R+ F+ FD +G G I A ELK +R+LG + EE+K+++ EID DG G IDF+EF T
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 90
Query: 77 FHLA 80
A
Sbjct: 91 MMTA 94
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 80 AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDG 139
G + + +E+++AFDL+D D +G I A EL ++ LG + ++ MI ++D DG G
Sbjct: 22 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSG 81
Query: 140 HVNFEEFKKMMT 151
++FEEF MMT
Sbjct: 82 TIDFEEFLTMMT 93
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 77 FHLAG-GSTDGTKELKDAF 94
TD +E+++AF
Sbjct: 71 MMARKMKDTDSEEEIREAF 89
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 113 VLKK 116
++ +
Sbjct: 71 MMAR 74
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADGDG ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DGDG IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 113 VLKK 116
++ +
Sbjct: 71 MMAR 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 113 VLKK 116
++ +
Sbjct: 71 MMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 149 MMTR 152
MM R
Sbjct: 72 MMAR 75
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 113 VLKK 116
++ +
Sbjct: 72 MMAR 75
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 32.3 bits (72), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 113 VLKK 116
++ +
Sbjct: 71 MMAR 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 32.3 bits (72), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 113 VLKK 116
++ +
Sbjct: 71 MMAR 74
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 113 VLKK 116
++ +
Sbjct: 71 MMAR 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 32.7 bits (73), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 113 VLKK 116
++ +
Sbjct: 71 MMAR 74
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 7/141 (4%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+++++ F D++G G I+ ++LK L G K P ++D+ID+DG G ID+ EF
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKL-PYNFDLLLDQIDSDGSGKIDYTEF 109
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKD-----CVNM 129
L K + AF ++D+D +G I+ EL +L +K ++ M
Sbjct: 110 IAAALDRKQL-SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRM 168
Query: 130 IKKVDADGDGHVNFEEFKKMM 150
I+ VD + DG ++F EF +MM
Sbjct: 169 IRDVDKNNDGKIDFHEFSEMM 189
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 86 GTKELKDAFDLYDMDQNGLISANELHAVLKKL-GEKSSLKDCVNMIKKVDADGDGHVNFE 144
G KEL+DAF +D + +G IS +EL ++KL G + +D +I+ VD +GDG V+FE
Sbjct: 5 GVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 64
Query: 145 EFKKMMTR 152
EF +MM+R
Sbjct: 65 EFVRMMSR 72
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRS-LGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E+R F +FD NGDG+IS EL++ +R LG + +++ ++ ++D +GDG +DF+EF
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
+F + D NGDG +S +E+K + + + + ++ + ID DG+G ID EF+ F+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY-- 62
Query: 81 GGSTDGTK------ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVD 134
GS G LK + L D+D +G ++ E+ + KK G ++ + K D
Sbjct: 63 -GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKAD 117
Query: 135 ADGDGHVNFEEF 146
A+GDG++ EEF
Sbjct: 118 ANGDGYITLEEF 129
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF 77
++ ++ D +GDGK++ +E+ + G + E+V + D +GDGYI +EF F
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA----DANGDGYITLEEFLEF 132
Query: 78 HL 79
L
Sbjct: 133 SL 134
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 94 FDLYDMDQNGLISANELHAVLKKLGEKSSLKD--CVNMI-KKVDADGDGHVNFEEFKKM 149
F D++ +G +S E+ A + K K ++K+ + +I K +DADG+G ++ EF K
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSK---KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ K++D +GDG V++EE K +++
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSK 28
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF LYD D +G I+ EL V++ LG + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 149 MMTR 152
MM R
Sbjct: 71 MMAR 74
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F+ +DK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF EF T
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 113 VLKKL 117
++ ++
Sbjct: 71 MMARI 75
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
+F + D NGDG +S +E+K + + + + ++ + ID DG+G ID EF+ F+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY-- 62
Query: 81 GGSTDGTK------ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVD 134
GS G LK + L D+D +G ++ E+ + KK G ++ + K D
Sbjct: 63 -GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKAD 117
Query: 135 ADGDGHVNFEEF 146
A+GDG++ EEF
Sbjct: 118 ANGDGYITLEEF 129
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF 77
++ ++ D +GDGK++ +E+ + G + E+V + D +GDGYI +EF F
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA----DANGDGYITLEEFLEF 132
Query: 78 HL 79
L
Sbjct: 133 SL 134
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ K++D +GDG V++EE K +++
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSK 28
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 94 FDLYDMDQNGLISANELHAVLKKLGEKSSLKD--CVNMI-KKVDADGDGHVNFEEFKKM 149
F D++ +G +S E+ A + K K ++K+ + +I K +DADG+G ++ EF K
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSK---KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
Query: 9 ANYLGSMDEVRK---VFNKFDKNGDGKISADEL---------------KDVLRSLGSKTS 50
A+ L ++DE ++ +F K D N DG + DEL ++++ GS T
Sbjct: 321 ASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGS-TI 379
Query: 51 PEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANEL 110
+++ +M +D DG G I++ EF + + ++ AF ++D D +G IS EL
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL 439
Query: 111 HAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
+ + +++ ++I++VD + DG V+F EF +M+
Sbjct: 440 FKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 40/100 (40%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
D++ + D +G G I E S E ++R D DG G I KE
Sbjct: 381 DQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELF 440
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLK 115
S+ +EL+ + D +++G + NE +L+
Sbjct: 441 KLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTD--GDGYIDF 71
++E ++ F FD+ GDGKI + DV+R+LG + EV +V+ +D +DF
Sbjct: 8 QLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDF 67
Query: 72 KEFSTFHLAGGSTDGTKELKD---AFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVN 128
+ F A G +D F ++D + NG + EL VL LGEK + ++ V
Sbjct: 68 ETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEE-VE 126
Query: 129 MIKKVDADGDGHVNFEEFKK 148
+ D +G +N+E F K
Sbjct: 127 TVLAGHEDSNGCINYEAFLK 146
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
G+ ++ + F FDK G+GK+ EL+ VL +LG K + EEV+ V+ + D +G I+++
Sbjct: 84 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYE 142
Query: 73 EF 74
F
Sbjct: 143 AF 144
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI--KKVDADGDGHVN 142
D +E K+AF+L+D +G I ++ V++ LG+ + + + ++ K D V+
Sbjct: 7 DQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVD 66
Query: 143 FEEFKKMM 150
FE F M+
Sbjct: 67 FETFLPML 74
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF---- 74
++ F+ FD++G G+I + D+LR+ G + E+ EI++ +D ++F
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEIT----EIESTLPAEVDMEQFLQVL 63
Query: 75 ---STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIK 131
+ F + G +E F ++D D G+I EL VL LGEK S ++ ++K
Sbjct: 64 NRPNGFDMPGDP----EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK 119
Query: 132 KVDADGDGHVNFEEFKKMM 150
V DG VN+ +F +M+
Sbjct: 120 GVPVK-DGMVNYHDFVQMI 137
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 4 NNSNGANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
N NG + G +E K F FDK+ G I EL+ VL SLG K S EE+ ++ +
Sbjct: 64 NRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV 123
Query: 64 DGDGYIDFKEFSTFHLA 80
DG +++ +F LA
Sbjct: 124 K-DGMVNYHDFVQMILA 139
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D +G I+ EL V++ LG+ + + +MI +VDADG+G ++F EF
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 149 MMTR 152
+M R
Sbjct: 71 LMAR 74
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E ++ F+ FDK+GDG I+ EL V+RSLG + E++ +++E+D DG+G IDF E
Sbjct: 8 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 74 F 74
F
Sbjct: 68 F 68
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHA 112
E K D DGDG I KE T + G EL+D + D D NG I E
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 113 VLKK 116
++ +
Sbjct: 71 LMAR 74
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTD--GDGYID 70
+ D+ ++ F FD+ GD KI+A ++ D+ R+LG + E+ +++ + I
Sbjct: 3 AAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAIT 62
Query: 71 FKEFSTFHLAGGST--DGTKE-LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV 127
F+EF A + GT E + ++D + NG + EL VL LGEK + ++
Sbjct: 63 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVE 122
Query: 128 NMIKKVDADGDGHVNFEEFKK 148
++K + D +G +N+E F K
Sbjct: 123 ELMKGQE-DSNGCINYEAFVK 142
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AANNSNGANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEI 61
AANN + G+ ++ + FDK G+G + EL+ VL +LG K + EEV+ +M
Sbjct: 73 AANNKDQ----GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQ 128
Query: 62 DTDGDGYIDFKEF 74
+ D +G I+++ F
Sbjct: 129 E-DSNGCINYEAF 140
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTD--GDGYID 70
+ D+ ++ F FD+ GD KI+A ++ D+ R+LG + E+ +++ + I
Sbjct: 5 AAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAIT 64
Query: 71 FKEFSTFHLAGGST--DGTKE-LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV 127
F+EF A + GT E + ++D + NG + EL VL LGEK + ++
Sbjct: 65 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVE 124
Query: 128 NMIKKVDADGDGHVNFEEFKK 148
++K + D +G +N+E F K
Sbjct: 125 ELMKGQE-DSNGCINYEAFVK 144
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AANNSNGANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEI 61
AANN + G+ ++ + FDK G+G + EL+ VL +LG K + EEV+ +M
Sbjct: 75 AANNKDQ----GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQ 130
Query: 62 DTDGDGYIDFKEF 74
+ D +G I+++ F
Sbjct: 131 E-DSNGCINYEAF 142
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E ++ FN D+N DG I ++L D+L S+G + E ++ +M E G I+F
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTM 60
Query: 74 FST-FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F T F TD +++AF +D + +G I + L +L +G++ + ++ M ++
Sbjct: 61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 133 VDADGDGHVNFEEFKKMM 150
D G+ N+ EF +++
Sbjct: 121 APIDKKGNFNYVEFTRIL 138
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+EL++AF LYD + NG IS + + +L +L E S +D MI ++DADG G V+FEEF
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 148 KMMT 151
+MT
Sbjct: 63 GVMT 66
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E+R+ F +DK G+G IS D ++++L L S E++ ++DEID DG G +DF+EF
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+ +++ F D+ G G I+ +L+ L G P ++D+ID+DG G ID+ EF
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPN-FDLLLDQIDSDGSGNIDYTEF 112
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKD-----CVNM 129
+ K + AF ++D+D +G I+ EL VL ++ ++ + M
Sbjct: 113 LAAAIDRRQL-SKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKM 171
Query: 130 IKKVDADGDGHVNFEEFKKMM 150
I++VD +GDG ++F EF +MM
Sbjct: 172 IREVDKNGDGKIDFYEFSEMM 192
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLR 43
+++V+K+ + DKNGDGKI E ++++
Sbjct: 165 VNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF--S 75
+++ FN D + G+I+ +ELK L+ +G+ E+ + D D G ID+KEF +
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
Query: 76 TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLG-EKSSLKDCVNMIKKVD 134
T HL + L AF +D D +G I+ +EL ++ G E +++ + + VD
Sbjct: 89 TLHL--NKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEE---LXRDVD 143
Query: 135 ADGDGHVNFEEF 146
D DG +++ EF
Sbjct: 144 QDNDGRIDYNEF 155
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 10 NYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSK-TSPEEVKRVMDEIDTDGDGY 68
N + D + F FDK+G G I+ DEL+ G + EE+ R ++D D DG
Sbjct: 93 NKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELXR---DVDQDNDGR 149
Query: 69 IDFKEFSTFHLAGGST 84
ID+ EF G T
Sbjct: 150 IDYNEFVAXXQKGSIT 165
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++E+R+ F FD++G+G IS EL +RSLG + E++ ++ +D DGDG +DF+EF
Sbjct: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEF 94
Query: 75 STF 77
T
Sbjct: 95 VTL 97
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFE 144
D +E+++AF ++D D NG IS EL ++ LG + + +I+++D DGDG V+FE
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 145 EFKKMM 150
EF ++
Sbjct: 93 EFVTLL 98
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 17 EVRKVFNKFDKNGDGKISADEL-----------KDVLRSLGSKTSPEEVKRVMDEIDTDG 65
E+ ++F + D NGDG++ EL D + L S EV ++ +D D
Sbjct: 41 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 100
Query: 66 DGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKD 125
+GYI++ EF T + + L AF +D D +G I+ E L +L + + D
Sbjct: 101 NGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEE----LGRLFGVTEVDD 156
Query: 126 --CVNMIKKVDADGDGHVNFEEFKKMMTR 152
++++ D + DG V+FEEF +MM +
Sbjct: 157 ETWHQVLQECDKNNDGEVDFEEFVEMMQK 185
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 10 NYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLG-SKTSPEEVKRVMDEIDTDGDGY 68
L S + + F +FD +G GKI+ +EL R G ++ E +V+ E D + DG
Sbjct: 117 QLLLSRERLLAAFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGE 173
Query: 69 IDFKEF 74
+DF+EF
Sbjct: 174 VDFEEF 179
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 17 EVRKVFNKFDKNGDGKISADELK-----------DVLRSLGSKTSPEEVKRVMDEIDTDG 65
E+ ++F + D NGDG++ EL D + L S EV ++ +D D
Sbjct: 315 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 374
Query: 66 DGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKD 125
+GYI++ EF T + + L AF +D D +G I+ E L +L + + D
Sbjct: 375 NGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEE----LGRLFGVTEVDD 430
Query: 126 --CVNMIKKVDADGDGHVNFEEFKKMMTR 152
++++ D + DG V+FEEF +MM +
Sbjct: 431 ETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 12 LGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLG-SKTSPEEVKRVMDEIDTDGDGYID 70
L S + + F +FD +G GKI+ +EL R G ++ E +V+ E D + DG +D
Sbjct: 393 LLSRERLLAAFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVD 449
Query: 71 FKEF 74
F+EF
Sbjct: 450 FEEF 453
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E ++ F FDK+ +G IS+ EL V+RSLG S EV +M+EID DG+ I+F EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKK 148
E K+AF L+D D NG IS++EL V++ LG S + +++ ++D DG+ + F EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 149 MMTR 152
+M+R
Sbjct: 71 LMSR 74
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 75 FEEFLVMMVRQ 85
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E + F+ FD +G G IS EL V+R LG + EE+ +++E+D DG G IDF+EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + ++ +I++VD DG G ++
Sbjct: 4 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 63
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 64 FEEFLVMMVRQ 74
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E + F+ FD +G G IS EL V+R LG + EE+ +++E+D DG G IDF+EF
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTS--PEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
VF + DK+ G IS +EL+ L S G+ T P V+ ++ D + ++F EF+
Sbjct: 31 VFQRVDKDRSGVISDNELQQAL-SNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT--- 86
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD 138
G + ++ F YD D +G+I NEL L G + S + +I+K D G
Sbjct: 87 ---GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 143
Query: 139 GHVNFEEF 146
G + F++F
Sbjct: 144 GQIAFDDF 151
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+ + + VF +D++ G I +ELK L G + S + ++ + D G G I F +F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISAN 108
+ G + L D F YD DQ+G I +
Sbjct: 152 ----IQGCIV--LQRLTDIFRRYDTDQDGWIQVS 179
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 90 LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV--NMIKKVDADGDGHVNFEEF 146
L + F D D++G+IS NEL L G + ++I D + VNF EF
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEF 85
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTS--PEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
VF + DK+ G IS EL+ L S G+ T P V+ ++ D + ++F EF+
Sbjct: 30 VFQRVDKDRSGVISDTELQQAL-SNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT--- 85
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD 138
G + ++ F YD D +G+I NEL L G + S + +I+K D G
Sbjct: 86 ---GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 142
Query: 139 GHVNFEEF 146
G + F++F
Sbjct: 143 GQIAFDDF 150
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+ + + VF +D++ G I +ELK L G + S + ++ + D G G I F +F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISAN 108
+ G + L D F YD DQ+G I +
Sbjct: 151 ----IQGCIV--LQRLTDIFRRYDTDQDGWIQVS 178
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 90 LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV--NMIKKVDADGDGHVNFEEF 146
L + F D D++G+IS EL L G + ++I D + VNF EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEF 84
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTS--PEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
VF + DK+ G IS EL+ L S G+ T P V+ ++ D + ++F EF+
Sbjct: 12 VFQRVDKDRSGVISDTELQQAL-SNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT--- 67
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD 138
G + ++ F YD D +G+I NEL L G + S + +I+K D G
Sbjct: 68 ---GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 124
Query: 139 GHVNFEEF 146
G + F++F
Sbjct: 125 GQIAFDDF 132
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+ + + VF +D++ G I +ELK L G + S + ++ + D G G I F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISAN 108
+ G + L D F YD DQ+G I +
Sbjct: 133 ----IQGCIV--LQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++ F FDK+GDG I+ +EL V+RSL + EE++ ++ E+D DG+G I+F EF
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + + K+AF L+D D +G I+ EL V++ L + + ++ +MI +VDADG+G +
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 143 FEEFKKMMTR 152
F+EF +M +
Sbjct: 65 FDEFLSLMAK 74
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 62 DTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKK 116
D DGDG I +E +T + +EL+D D D NG I +E +++ K
Sbjct: 20 DKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVM-----DEIDTDGDGYI 69
+++ ++ F FD+ GD KI+ ++ D++R+LG + E+ +++ +E++ I
Sbjct: 3 INDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAK---KI 59
Query: 70 DFKEFSTFHLAGGST--DGTKE-LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDC 126
F+EF A + GT E + ++D + NG + EL VL LGEK + ++
Sbjct: 60 TFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEV 119
Query: 127 VNMIKKVDADGDGHVNFEEFKK 148
++K + D +G +N+E F K
Sbjct: 120 EELMKGQE-DSNGCINYEAFVK 140
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 2 AANNSNGANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEI 61
AANN + G+ ++ + FDK G+G + EL+ VL +LG K + EEV+ +M
Sbjct: 71 AANNKDQ----GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG- 125
Query: 62 DTDGDGYIDFKEF 74
D +G I+++ F
Sbjct: 126 QEDSNGCINYEAF 138
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTS--PEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
VF + DK+ G IS EL+ L S G+ T P V+ ++ D + ++F EF+
Sbjct: 8 VFQRVDKDRSGVISDTELQQAL-SNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT--- 63
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD 138
G + ++ F YD D +G+I NEL L G + S + +I+K D G
Sbjct: 64 ---GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 120
Query: 139 GHVNFEEF 146
G + F++F
Sbjct: 121 GQIAFDDF 128
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+ + + VF +D++ G I +ELK L G + S + ++ + D G G I F +F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISAN 108
+ G + L D F YD DQ+G I +
Sbjct: 129 ----IQGCIV--LQRLTDIFRRYDTDQDGWIQVS 156
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTS--PEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
VF + DK+ G IS EL+ L S G+ T P V+ ++ D + ++F EF+
Sbjct: 9 VFQRVDKDRSGVISDTELQQAL-SNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT--- 64
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD 138
G + ++ F YD D +G+I NEL L G + S + +I+K D G
Sbjct: 65 ---GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 121
Query: 139 GHVNFEEF 146
G + F++F
Sbjct: 122 GQIAFDDF 129
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+ + + VF +D++ G I +ELK L G + S + ++ + D G G I F +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISAN 108
+ G + L D F YD DQ+G I +
Sbjct: 130 ----IQGCIV--LQRLTDIFRRYDTDQDGWIQVS 157
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++ F FDK+GDG I+ +EL V+RSL + EE++ ++ E+D DG+G I+F EF
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 90 LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKM 149
K+AF L+D D +G I+ EL V++ L + + ++ +MI +VDADG+G + F+EF +
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 150 MTR 152
M +
Sbjct: 72 MAK 74
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 62 DTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKK 116
D DGDG I +E +T + +EL+D D D NG I +E +++ K
Sbjct: 20 DKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGY--IDFKEF 74
E ++ F FD+ GDGKI + DV+R+LG + EV +V+ +D + F++F
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 67
Query: 75 STFH--LAGGSTDGTKE-LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIK 131
+A G E + ++D + NG + E+ VL LGEK + ++ ++
Sbjct: 68 LPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVA 127
Query: 132 KVDADGDGHVNFEEFKKMM 150
+ D +G +N+EE +M+
Sbjct: 128 GHE-DSNGCINYEELVRMV 145
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 25 FDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAG 81
FDK G+G + E++ VL +LG K + EEV++++ + D +G I+++E L+G
Sbjct: 93 FDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELVRMVLSG 148
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI--KKVDADGDGH 140
S + T E K+AF L+D +G I ++ V++ LG+ + + + ++ K D
Sbjct: 2 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKT 61
Query: 141 VNFEEFKKMM 150
+ FE+F MM
Sbjct: 62 LKFEQFLPMM 71
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGY--IDFKEF 74
E ++ F FD+ GDGKI + DV+R+LG + EV +V+ +D + F++F
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 69
Query: 75 STFH--LAGGSTDGTKE-LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIK 131
+A G E + ++D + NG + E+ VL LGEK + ++ V +
Sbjct: 70 LPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEE-VEQLV 128
Query: 132 KVDADGDGHVNFEEFKKMM 150
D +G +N+EE +M+
Sbjct: 129 AGHEDSNGCINYEELVRMV 147
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 25 FDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAG 81
FDK G+G + E++ VL +LG K + EEV++++ + D +G I+++E L+G
Sbjct: 95 FDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELVRMVLSG 150
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI--KKVDADGDGH 140
S + T E K+AF L+D +G I ++ V++ LG+ + + + ++ K D
Sbjct: 4 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKT 63
Query: 141 VNFEEFKKMM 150
+ FE+F MM
Sbjct: 64 LKFEQFLPMM 73
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+ELK+AF + D ++ G+I + L +LK LG++ + + NMI + D DG G V++EEFK
Sbjct: 7 RELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFK 66
Query: 148 KMMTRS 153
+M S
Sbjct: 67 CLMMSS 72
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E+++ F DK G I D L+ +L+SLG + + +E++ ++ E DTDG G +D++EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 77 FHLAG 81
++
Sbjct: 68 LMMSS 72
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS L V++ LG+ + ++ +I++VD DG G ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 75 FEEFLVMMVRQ 85
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E + F+ FD +G G IS L V+R LG + EE+ +++E+D DG G IDF+EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + E K AFD++D D G IS EL V++ LG+ + + +I +VD DG G ++
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTID 74
Query: 143 FEEFKKMMTRS 153
FEEF MM R
Sbjct: 75 FEEFLVMMVRQ 85
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E + F+ FD +G G IS EL V+R LG + E+ ++ E+D DG G IDF+EF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEF 78
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTS--PEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
VF + DK+ G IS EL+ L S G+ T P V+ ++ D + ++F EF+
Sbjct: 12 VFQRVDKDRSGVISDTELQQAL-SNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT--- 67
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD 138
G + ++ F YD D +G+I NEL L G + S + +I+K D G
Sbjct: 68 ---GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGR 124
Query: 139 GHVNFEEF 146
G + F++F
Sbjct: 125 GQIAFDDF 132
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+ + + VF +D++ G I +ELK L G + S + ++ + D G G I F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISAN 108
+ G + L D F YD DQ+G I +
Sbjct: 133 ----IQGCIV--LQRLTDIFRRYDTDQDGWIQVS 160
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 14 SMDEVRKVFNKF-DKNGDGKISADELKDV--LRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
S E + + KF + G+++ E K L++L S ++ + V+++ + D + DGYID
Sbjct: 12 SATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNL-SPSANKYVEQMFETFDFNKDGYID 70
Query: 71 FKEF--STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLK------KLGEKSS 122
F E+ + + G D ++L+ F LYD+D NG I EL ++K + E +
Sbjct: 71 FMEYVAALSLVLKGKVD--QKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMT 128
Query: 123 LKDCVNMI-KKVDADGDGHVNFEEF 146
++ NM+ K+D +GDG ++ EEF
Sbjct: 129 AEEFTNMVFDKIDINGDGELSLEEF 153
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAG-GSTDGTKELKDAFDLYDMDQNGLISANELH 111
E++ +++E+D DG+G IDF EF T TD +E+++AF ++D D NG ISA EL
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 112 AVLKKLG 118
V+ LG
Sbjct: 62 HVMTNLG 68
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLG 46
S +E+R+ F FDK+G+G ISA EL+ V+ +LG
Sbjct: 36 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTR 152
+MI +VDADG+G ++F EF MM R
Sbjct: 5 DMINEVDADGNGTIDFPEFLTMMAR 29
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVL-RSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E++ + N+ D +G+G I E ++ R + S EE++ D DG+GYI E
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 19 RKVFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKRVMDEID----------- 62
+ +FN D N +GKIS DE+ V+ +LG+ +PE+ KR D ++
Sbjct: 19 KHMFNFLDVNHNGKISLDEMVYKASDIVINNLGA--TPEQAKRHKDAVEAFFGGAGMKYG 76
Query: 63 --TDGDGYID-FKEFSTFHL---AGGSTDGTKELKDA-FDLYDMDQNGLISANELHAVLK 115
TD YI+ +K+ +T L A + DA FD+ D DQNG I+ +E A K
Sbjct: 77 VETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTK 136
Query: 116 KLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
G S +DC + D D G ++ +E MTR
Sbjct: 137 AAGIIQSSEDCEETFRVCDIDESGQLDVDE----MTRQ 170
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHL 79
+F+ DK+ +G I+ DE K ++ G S E+ + D D G +D E + HL
Sbjct: 114 LFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
E+R+ F+ FD +G G I ELK +R+LG + EE+K+++ EID +G G ++F +F
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 76 T 76
T
Sbjct: 91 T 91
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+E+++AFDL+D D G I EL ++ LG + ++ MI ++D +G G +NF +F
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 148 KMMTR 152
+MT+
Sbjct: 91 TVMTQ 95
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDMD-QNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ D ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM R
Sbjct: 79 VMMVRC 84
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 17 EVRKVFNKFDKNG-DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E + F+ F ++ DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDMD-QNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ D ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM R
Sbjct: 79 VMMVRC 84
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 17 EVRKVFNKFDKNG-DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E + F+ F ++ DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFE 144
D E K+AF+L+D ++ G I+ L VLK+ G + M + DA G+G + F
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 145 EFKKMMTR 152
EF MM R
Sbjct: 63 EFLSMMGR 70
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTD 64
S D +R+ F FD G G I L+D L +LG + P E + +T+
Sbjct: 77 SEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITETE 127
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 20 KVFNKFDKNGDGKISADELKDVL-RSLGSKTSPEEVKRVMDEIDTDGDGYI 69
++FN+ D G+GKI E ++ R + TS + +++ D +G GYI
Sbjct: 46 EMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYI 96
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVM-------DEIDTDGDGYIDFKE 73
+F FDK G G I+ D L D LR++G + + V+ ++ D D E
Sbjct: 9 IFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIE 68
Query: 74 FSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKV 133
+ L + T++ AF ++D + G +S +L +L LGEK + + ++K V
Sbjct: 69 VNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGV 128
Query: 134 DADGDGHVNFEEFKKMMTRS 153
+ D +G +++++F + + R
Sbjct: 129 EVDSNGEIDYKKFIEDVLRQ 148
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
K F FDK GK+S +L+ +L LG K + EV ++ ++ D +G ID+K+F
Sbjct: 87 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 141
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTS--PEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
VF + DK+ G IS EL+ L S G+ T P V+ ++ D + ++F EF+
Sbjct: 9 VFQRVDKDRSGVISDTELQQAL-SNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT--- 64
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD 138
G + ++ F YD D +G+I NEL L D +I+K D G
Sbjct: 65 ---GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDI--LIRKFDRQGR 119
Query: 139 GHVNFEEF 146
G + F++F
Sbjct: 120 GQIAFDDF 127
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
VF +D++ G I +ELK L G + S + ++ + D G G I F +F +
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF----IQ 129
Query: 81 GGSTDGTKELKDAFDLYDMDQNGLISAN 108
G + L D F YD DQ+G I +
Sbjct: 130 GCIV--LQRLTDIFRRYDTDQDGWIQVS 155
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 86 GTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
G ++L+ AF +D D +G I+ +EL + LG+ ++ MI++ D D DG VN+EE
Sbjct: 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEE 63
Query: 146 FKKMMTR 152
F +M+ +
Sbjct: 64 FARMLAQ 70
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+++++ F FD++GDG I+ DEL+ + LG EE+ ++ E D D DG ++++EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 75 S 75
+
Sbjct: 65 A 65
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 120 KSSLKDCVNMIKKVDADGDGHVNFEEFKKMMT 151
++ L+D + D DGDGH+ +E ++ M
Sbjct: 2 RAGLEDLQVAFRAFDQDGDGHITVDELRRAMA 33
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM RS
Sbjct: 79 VMMVRS 84
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 17 EVRKVFNKFDKNG-DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E + F+ F + DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM R
Sbjct: 79 VMMVRC 84
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
Query: 17 EVRKVFNKFDKN-GDGKISADELKDVLRSLGSKTSPEE-VKRVMDEIDTDGDGYIDFKEF 74
E+++ + F K+ G ++ E + + + P + V + D D +GYIDFKEF
Sbjct: 26 ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEF 85
Query: 75 STFHLAGGSTDGTKELKD----AFDLYDMDQNGLISANEL----HAVLKKLG-------- 118
+ S EL D AF LYD+D NGLIS +E+ A+ K +G
Sbjct: 86 ----ICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPED 141
Query: 119 EKSSLKDCVNMIKKVDADGDGHVNFEEF 146
E + K + +D + DG + EEF
Sbjct: 142 EDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
SM+E +K++ F GD A+ V R+ D +GDG IDF+E
Sbjct: 44 SMEEFKKIYGNFFPYGDASKFAEH---VFRTF----------------DANGDGTIDFRE 84
Query: 74 FSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLG------------EKS 121
F ++LK AF +YD+D NG IS E+ +++ + E +
Sbjct: 85 FIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDEST 144
Query: 122 SLKDCVNMIKKVDADGDGHVNFEEF 146
K + +++D + DG ++ EEF
Sbjct: 145 PEKRTEKIFRQMDTNRDGKLSLEEF 169
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
++VF KFDKN DGK+S DE ++V + + E++ + +EID DG+G ++ EF++
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 91 KDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
K F+ +D +++G +S +E V + +D V +++D DG+G +N +EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 151 TR 152
+
Sbjct: 64 EK 65
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
MM R
Sbjct: 79 VMMVRC 84
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF EF
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
M E+++ F D++ DG I ++LKD+ SLG +E+ ++ E G ++F
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTA 69
Query: 74 FST-FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIK 131
F T F TD L++AF ++D D G I + L +L+ +G+ S ++ N+ K
Sbjct: 70 FLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWK 128
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 12 LGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTS--------PEEVKRVMDEIDT 63
L S +E K + K+D + G I +ELK+ L+ L K + E ++ D+
Sbjct: 99 LKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDS 158
Query: 64 DGDGYIDFKEFS-------TFHLA-GGSTDGTKELKDAFDLYDMDQNGLISANELHAVLK 115
+ DG ++ E + F L G KE AF+LYD D NG I NEL A+LK
Sbjct: 159 NNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLK 218
Query: 116 KLGEKS 121
L EK+
Sbjct: 219 DLCEKN 224
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSL-------GSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+++ FD +G G + EL+++++ L G + SP E+K +D+ DG I
Sbjct: 20 EIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSP-EMKTFVDQYGQRDDGKIGIV 78
Query: 73 EFS---------TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSS- 122
E + +E + YD D +G I EL LK L EK++
Sbjct: 79 ELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANK 138
Query: 123 ------LKDCVN-MIKKVDADGDGHVNFEEFKKMM 150
L + + M+K D++ DG + E +++
Sbjct: 139 TVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 29/158 (18%)
Query: 19 RKVFNKFDKNGDGKISADELKD-----VLRSLGSKTSPEEVKRVMDEID----------- 62
+ +FN D N +G+IS DE+ V+ +LG+ +PE+ KR D ++
Sbjct: 19 KHMFNFLDVNHNGRISLDEMVYKASDIVINNLGA--TPEQAKRHKDAVEAFFGGAGMKYG 76
Query: 63 --TDGDGYID-FKEFSTFHLAGGSTDGTKELK---DA-FDLYDMDQNGLISANELHAVLK 115
T+ YI+ +K ++ L S + ++ DA FD+ D DQNG IS +E A K
Sbjct: 77 VETEWPEYIEGWKRLASEELKRYSKNQITLIRLWGDALFDIIDKDQNGAISLDEWKAYTK 136
Query: 116 KLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
G S +DC + D D G ++ +E MTR
Sbjct: 137 SAGIIQSSEDCEETFRVCDIDESGQLDVDE----MTRQ 170
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
+F+ DK+ +G IS DE K +S G S E+ + D D G +D E + HL
Sbjct: 114 LFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 173
Query: 81 GGST 84
T
Sbjct: 174 FWYT 177
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
++EVR+VF+ FD DG + A ++ D+LR LG + +V + G+ +
Sbjct: 8 IEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQ-HGGTKKMGEKAYKLE 66
Query: 73 EFSTFHLAGGSTD-GTK--ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNM 129
E + S D GT E +AF +D + GLIS+ E+ VLK LGE+ + C ++
Sbjct: 67 EILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDI 126
Query: 130 IKKVDA--DGDGHVNFEEF-KKMMT 151
D D DG++ +E+ KK+M
Sbjct: 127 FTFCDIREDIDGNIKYEDLMKKVMA 151
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMD--EIDTDGDGYIDF 71
+ DE + F FD+ G G IS+ E+++VL+ LG + + ++ + +I D DG I +
Sbjct: 83 AADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKY 142
Query: 72 KEFSTFHLAGGSTD 85
++ +AG D
Sbjct: 143 EDLMKKVMAGPFPD 156
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+E+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 148 KMMTRS 153
MM R
Sbjct: 79 VMMARC 84
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V++ LG+ + ++ MI +VD DG G V+F+E+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 148 KMMTRS 153
MM R
Sbjct: 79 VMMVRC 84
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
DG IS EL V+R LG +PEE++ ++DE+D DG G +DF E+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 25/154 (16%)
Query: 19 RKVFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKRVMDEID----------- 62
+ FN D N +GKIS DE V+ +LG+ +PE+ KR D ++
Sbjct: 19 KHXFNFLDVNHNGKISLDEXVYKASDIVINNLGA--TPEQAKRHKDAVEAFFGGAGXKYG 76
Query: 63 --TDGDGYID-FKEFSTFHL---AGGSTDGTKELKDA-FDLYDMDQNGLISANELHAVLK 115
TD YI+ +K+ +T L A + DA FD+ D DQNG I+ +E A K
Sbjct: 77 VETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTK 136
Query: 116 KLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKM 149
G S +DC + D D G ++ +E +
Sbjct: 137 AAGIIQSSEDCEETFRVCDIDESGQLDVDEXTRQ 170
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHL 79
+F+ DK+ +G I+ DE K ++ G S E+ + D D G +D E + HL
Sbjct: 114 LFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTRQHL 172
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D+++ VF FD DG + A +L DV R LG E+V V G+ + F+
Sbjct: 6 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSLPFE 64
Query: 73 EF-STFHLAGGSTDGT-KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + GT + +AF +D + G IS EL VL LGE+ S +D +I
Sbjct: 65 EFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 124
Query: 131 KKVDA--DGDGHVNFEEF-KKMMT 151
K D D +G+V +E+F KK+M
Sbjct: 125 KLTDLQEDLEGNVKYEDFVKKVMA 148
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRV--MDEIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL +LG + S E+V + + ++ D +G +
Sbjct: 79 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVK 138
Query: 71 FKEFSTFHLAG 81
+++F +AG
Sbjct: 139 YEDFVKKVMAG 149
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D+++ VF FD DG + A +L DV R LG E+V V G+ + F+
Sbjct: 5 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSLPFE 63
Query: 73 EF-STFHLAGGSTDGT-KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + GT + +AF +D + G IS EL VL LGE+ S +D +I
Sbjct: 64 EFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
Query: 131 KKVDA--DGDGHVNFEEF-KKMMT 151
K D D +G+V +E+F KK+M
Sbjct: 124 KLTDLQEDLEGNVKYEDFVKKVMA 147
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRV--MDEIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL +LG + S E+V + + ++ D +G +
Sbjct: 78 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVK 137
Query: 71 FKEFSTFHLAG 81
+++F +AG
Sbjct: 138 YEDFVKKVMAG 148
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D+++ VF FD DG + A +L DV R LG E+V V G+ + F+
Sbjct: 8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSLPFE 66
Query: 73 EF-STFHLAGGSTDGT-KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + GT + +AF +D + G IS EL VL LGE+ S +D +I
Sbjct: 67 EFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 131 KKVDA--DGDGHVNFEEF-KKMMT 151
K D D +G+V +E+F KK+M
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVMA 150
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRV--MDEIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL +LG + S E+V + + ++ D +G +
Sbjct: 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVK 140
Query: 71 FKEFSTFHLAG 81
+++F +AG
Sbjct: 141 YEDFVKKVMAG 151
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D+++ VF FD DG + A +L DV R LG E+V V G+ + F+
Sbjct: 5 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSLPFE 63
Query: 73 EF-STFHLAGGSTDGT-KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + GT + +AF +D + G IS EL VL LGE+ S +D +I
Sbjct: 64 EFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
Query: 131 KKVDA--DGDGHVNFEEF-KKMMT 151
K D D +G+V +E+F KK+M
Sbjct: 124 KLTDLQEDLEGNVKYEDFVKKVMA 147
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRV--MDEIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL +LG + S E+V + + ++ D +G +
Sbjct: 78 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVK 137
Query: 71 FKEFSTFHLAG 81
+++F +AG
Sbjct: 138 YEDFVKKVMAG 148
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D++++VF FD DG + A ++ DV R LG E+V V G+ + F+
Sbjct: 8 IDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGG-THKMGEKSLPFE 66
Query: 73 EFSTFH--LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + L + +AF +D + G IS EL VL LGE+ S ++ +I
Sbjct: 67 EFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
Query: 131 KKVD--ADGDGHVNFEEF-KKMMT 151
D D +G+V +EEF KK+MT
Sbjct: 127 NLTDLQEDLEGNVKYEEFVKKVMT 150
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMD--EIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL LG + S EEV +++ ++ D +G +
Sbjct: 81 GTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVK 140
Query: 71 FKEFSTFHLAGGSTD 85
++EF + G D
Sbjct: 141 YEEFVKKVMTGPYPD 155
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D++++VF FD DG + A ++ DV R LG E+V V G+ + F+
Sbjct: 9 IDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGG-THKMGEKSLPFE 67
Query: 73 EFSTFH--LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + L + +AF +D + G IS EL VL LGE+ S ++ +I
Sbjct: 68 EFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 127
Query: 131 KKVD--ADGDGHVNFEEF-KKMMT 151
D D +G+V +EEF KK+MT
Sbjct: 128 NLTDLQEDLEGNVKYEEFVKKVMT 151
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMD--EIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL LG + S EEV +++ ++ D +G +
Sbjct: 82 GTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVK 141
Query: 71 FKEFSTFHLAGGSTD 85
++EF + G D
Sbjct: 142 YEEFVKKVMTGPYPD 156
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D+++ VF FD DG + A +L DV R LG E+V V G+ + F+
Sbjct: 8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSLPFE 66
Query: 73 EF-STFHLAGGSTDGT-KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + GT + +AF +D + G IS EL VL LGE+ S +D +I
Sbjct: 67 EFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 131 KKVD--ADGDGHVNFEEF-KKMMT 151
K D D +G+V +E+F KK+M
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVMA 150
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRV--MDEIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL +LG + S E+V + + ++ D +G +
Sbjct: 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVK 140
Query: 71 FKEFSTFHLAGGSTD 85
+++F +AG D
Sbjct: 141 YEDFVKKVMAGPYPD 155
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
DG IS EL V R LG +PEE++ +DE+D DG G +DF EF
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 89 ELKDAFDLYDM-DQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
E K AFD++ + ++G IS EL V + LG+ + ++ I +VD DG G V+F+EF
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFL 78
Query: 148 KMMTRS 153
R
Sbjct: 79 VXXVRC 84
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ +F FDKN DG I DELK +L++ G + ++++ +M + D + DG ID+ E
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 74 FSTF 77
F F
Sbjct: 64 FLEF 67
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+EL D F ++D + +G I +EL +L+ GE + D ++K D + DG ++++EF
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Query: 148 KMM 150
+ M
Sbjct: 66 EFM 68
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 69 IDFKEFSTFHLAGGSTDGTKE-LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV 127
++F +F T S TKE + AF L+D D+ G IS L V K+LGE + ++
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTRS 153
MI + D DGDG V+ +EF ++M ++
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIMKKT 86
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+E+ K F FD + GKIS LK V + LG + EE++ ++DE D DGDG + +EF
Sbjct: 21 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 43 RSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQN 102
+ + K + EE+ + D D G I FK G +EL++ D D D +
Sbjct: 12 QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGD 71
Query: 103 GLISANELHAVLKK 116
G +S E ++KK
Sbjct: 72 GEVSEQEFLRIMKK 85
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFE 144
D +E+ AF L+D D+ G IS L V K+LGE + ++ MI + D DGDG V+ +
Sbjct: 8 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 67
Query: 145 EFKKMMTRS 153
EF ++M ++
Sbjct: 68 EFLRIMKKT 76
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+E+ K F FD + GKIS LK V + LG + EE++ ++DE D DGDG + +EF
Sbjct: 11 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 43 RSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQN 102
+ + K + EE+ + D D G I FK G +EL++ D D D +
Sbjct: 2 QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGD 61
Query: 103 GLISANELHAVLKK 116
G +S E ++KK
Sbjct: 62 GEVSEQEFLRIMKK 75
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ F FDKN DG I +EL ++LR+ G E+++ +M + D + DG IDF E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 74 F 74
F
Sbjct: 68 F 68
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+EL + F ++D + +G I EL +L+ GE +D +++K D + DG ++F+EF
Sbjct: 10 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
Query: 148 KMM 150
KMM
Sbjct: 70 KMM 72
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYID 70
S D+V+KVF+ DK+ DG I DEL +L+ S S +E K +M D DGDG I
Sbjct: 39 SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 98
Query: 71 FKEFSTF 77
+EFST
Sbjct: 99 VEEFSTL 105
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 50 SPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE 109
S E++K+ + T D + D K+F F + G ++K F + D D++G I +E
Sbjct: 7 SAEDIKKAIGAF-TAADSF-DHKKF--FQMVGLKKKSADDVKKVFHILDKDKDGFIDEDE 62
Query: 110 LHAVLKKLGEKS---SLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
L ++LK + S K+ ++ D DGDG + EEF ++ S
Sbjct: 63 LGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 42 LRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQ 101
L+ L K + + + +V + DT+ DG++DF EF ++LK F LYD D
Sbjct: 48 LQGLNQKAN-KHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADG 106
Query: 102 NGLISANEL----HAVLKKLGEKS-SLKDCVNMI-KKVDADGDGHVNFEEFKKMMTR 152
NG I NEL AV G+++ S ++ +N++ K+D + DG + EEF M +
Sbjct: 107 NGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 1 MAANNSNGANYLGSMDEVRKVFNKFDKNGDGKISADEL 38
MA NG L + + VF+K D N DG+++ +E
Sbjct: 120 MAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 16 DEVRKVFNKFDKN-GDGKISADELKDVLRSLGSKTSPEE-VKRVMDEIDTDGDGYIDFKE 73
+E+ + F K G+I+ E + + + P+ + V D + DG +DFKE
Sbjct: 26 EELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKE 85
Query: 74 FS-TFHL-AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNM 129
+ H+ + G T+ ++L+ AF LYD+D NG IS NE+ ++ + + S +D ++
Sbjct: 86 YVIALHMTSAGKTN--QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 141
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
F+ +D +G+G IS +E+ +++ ++ SPE+ K + ++ +T
Sbjct: 105 AFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENT 147
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 16 DEVRKVFNKFDKN-GDGKISADELKDVLRSLGSKTSPEE-VKRVMDEIDTDGDGYIDFKE 73
+E+ + F K G+I+ E + + + P+ + V D + DG +DFKE
Sbjct: 25 EELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKE 84
Query: 74 FS-TFHL-AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNM 129
+ H+ + G T+ ++L+ AF LYD+D NG IS NE+ ++ + + S +D ++
Sbjct: 85 YVIALHMTSAGKTN--QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
F+ +D +G+G IS +E+ +++ ++ SPE+ K + ++ +T
Sbjct: 104 AFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 16 DEVRKVFNKFDKN-GDGKISADELKDVLRSLGSKTSPEE-VKRVMDEIDTDGDGYIDFKE 73
+E+ + F K G+I+ E + + + P+ + V D + DG +DFKE
Sbjct: 25 EELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKE 84
Query: 74 FS-TFHL-AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNM 129
+ H+ + G T+ ++L+ AF LYD+D NG IS NE+ ++ + + S +D ++
Sbjct: 85 YVIALHMTSAGKTN--QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
F+ +D +G+G IS +E+ +++ ++ SPE+ K + ++ +T
Sbjct: 104 AFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFNKFD--KNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D+++ VF FD DG + A +L DV R LG E+V V G+ + F+
Sbjct: 8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSLPFE 66
Query: 73 EF-STFHLAGGSTDGT-KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + GT + +AF +D + G IS EL VL LGE+ S ++ +I
Sbjct: 67 EFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
Query: 131 KKVD--ADGDGHVNFEEF-KKMMT 151
D D +G+V +EEF KK+M
Sbjct: 127 NLTDLQEDLEGNVKYEEFVKKVMA 150
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMD--EIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL LG + S EEV +++ ++ D +G +
Sbjct: 81 GTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVK 140
Query: 71 FKEFSTFHLAGGSTD 85
++EF +AG D
Sbjct: 141 YEEFVKKVMAGPYPD 155
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 16 DEVRKVFNKFDKN-GDGKISADELKDVLRSLGSKTSPEE-VKRVMDEIDTDGDGYIDFKE 73
+E+ + F K G+I+ E + + + P+ + V D + DG +DFKE
Sbjct: 25 EELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKE 84
Query: 74 FS-TFHL-AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNM 129
+ H+ + G T+ ++L+ AF LYD+D NG IS NE+ ++ + + S +D ++
Sbjct: 85 YVIALHMTSAGKTN--QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
F+ +D +G+G IS +E+ +++ ++ SPE+ K + ++ +T
Sbjct: 104 AFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
E+++ F+ FD N G I ELK +R+LG E+ +M+E D +G+GYI F +F
Sbjct: 8 EIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDF 65
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
S + +E+K+AFDL+D ++ G I +EL ++ LG + + ++ + D +G+G++
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 143 FEEFKKMMT 151
F++F +MT
Sbjct: 62 FDDFLDIMT 70
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 47 SKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLI 105
S+ +E+K D DT+ G ID+ E A G E+ + + YD + NG I
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ +F FDKN DG I +ELK +L++ G + ++++ +M + D + DG ID+ E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 74 FSTF 77
F F
Sbjct: 65 FLEF 68
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+EL D F ++D + +G I EL +L+ GE + D ++K D + DG ++++EF
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Query: 148 KMM 150
+ M
Sbjct: 67 EFM 69
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 50 SPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE 109
S EE+ + D + DGYID +E A G T ++++ D + +G I +E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 110 LHAVLK 115
+K
Sbjct: 65 FLEFMK 70
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 15 MDEVRKVFN--KFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
+D+++ VF F DG + A +L DV R LG E+V V G+ + F+
Sbjct: 8 IDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSLPFE 66
Query: 73 EF-STFHLAGGSTDGT-KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
EF + GT + +AF +D + G IS EL VL LGE+ S +D +I
Sbjct: 67 EFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 131 KKVDA--DGDGHVNFEEF-KKMMT 151
K D D +G+V +E+F KK+M
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVMA 150
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRV--MDEIDTDGDGYID 70
G+ + + F FD+ G G IS EL+ VL +LG + S E+V + + ++ D +G +
Sbjct: 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVK 140
Query: 71 FKEFSTFHLAGGSTD 85
+++F +AG D
Sbjct: 141 YEDFVKKVMAGPYPD 155
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S +E+ +F FDKN DG I +ELK +L++ G + ++++ +M + D + DG ID+ E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 74 FSTF 77
F F
Sbjct: 63 FLEF 66
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+EL D F ++D + +G I EL +L+ GE + D ++K D + DG ++++EF
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 148 KMM 150
+ M
Sbjct: 65 EFM 67
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 50 SPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE 109
S EE+ + D + DGYID +E A G T ++++ D + +G I +E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 110 LHAVLK 115
+K
Sbjct: 63 FLEFMK 68
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 31 GKISADELKDVLRSLGSKTSPEEVK-RVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKE 89
G+++ ++ + + SPE+ + D D +G+I F+EF T + ++ GT E
Sbjct: 41 GQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFIT--VLSTTSRGTLE 98
Query: 90 --LKDAFDLYDMDQNGLISANEL----HAVLKKLGEKSSLKD--------CVNMIKKVDA 135
L AF+LYD++ +G I+ +E+ +V K +G +L + + K +D
Sbjct: 99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDK 158
Query: 136 DGDGHVNFEEFKK 148
+ DG++ +EF++
Sbjct: 159 NEDGYITLDEFRE 171
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 23/106 (21%)
Query: 13 GSMDE-VRKVFNKFDKNGDGKISADELKDVLRS----LGS-------KTSPE-EVKRVMD 59
G+++E + F +D N DG I+ DE+ ++ S +GS + +PE VK++
Sbjct: 95 GTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFK 154
Query: 60 EIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLI 105
+D + DGYI EF G D + + A +LYD GLI
Sbjct: 155 LMDKNEDGYITLDEFR----EGSKVDPS--IIGALNLYD----GLI 190
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E ++ F D++ DG IS ++++ SLG + +E +D + + G I+F
Sbjct: 55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQE----LDSMVAEAPGPINFTM 110
Query: 74 FSTF---HLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
F T +AG TD + +AF+L+D + +G L L GEK S + +
Sbjct: 111 FLTIFGDRIAG--TDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQAL 167
Query: 131 KKVDADGDGHVNFEEFKKMMTR 152
+ DG+G ++ ++F +++T+
Sbjct: 168 SEAPIDGNGLIDIKKFAQILTK 189
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
D + FN FD+ GDGK + LK L + G K S +EV + + E DG+G ID K+F+
Sbjct: 126 DVIVNAFNLFDE-GDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFA 184
Query: 76 TFHLAGGSTDG 86
G +G
Sbjct: 185 QILTKGAKEEG 195
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT-SPEEVKRVMDEIDTDGDGYIDFKEF 74
+E+ + F FD NGDG I DE K +++ +G + + EV+ M E D DG+G ID EF
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKS-SLKDCVNMIKKVDADGDGHVN 142
D +E+ AF ++D + +G+I +E +++K+GE+ + + +K+ D DG+G ++
Sbjct: 4 QDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 63
Query: 143 FEEFKKMMTRS 153
EF ++ +S
Sbjct: 64 IPEFMDLIKKS 74
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 16 DEVRKVFNKFDKN-GDGKISADELKDVLRSLGSKTSPEE-VKRVMDEIDTDGDGYIDFKE 73
+E+ + F K G+I+ E + + + P+ + V D + DG +DFK+
Sbjct: 25 EELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQ 84
Query: 74 FS-TFHL-AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNM 129
+ H+ + G T+ ++L+ AF LYD+D NG IS NE+ ++ + + S +D ++
Sbjct: 85 YVIALHMTSAGKTN--QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
F+ +D +G+G IS +E+ +++ ++ SPE+ K + ++ +T
Sbjct: 104 AFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+E+ +F FDKN DG I +ELK +L++ G + ++++ +M + D + DG ID+ EF
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
Query: 76 TF 77
F
Sbjct: 75 EF 76
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+EL D F ++D + +G I EL +L+ GE + D ++K D + DG ++++EF
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
Query: 148 KMM 150
+ M
Sbjct: 75 EFM 77
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 16 DEVRKVFNKFDKN-GDGKISADELKDVLRSLGSKTSPEE-VKRVMDEIDTDGDGYIDFKE 73
+E+ + F K G+I+ E + + + P+ + V D + DG +DFK+
Sbjct: 25 EELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQ 84
Query: 74 FS-TFHL-AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNM 129
+ H+ + G T+ ++L+ AF LYD+D NG IS NE+ ++ + + S +D ++
Sbjct: 85 YVIALHMTSAGKTN--QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHL 140
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
F+ +D +G+G IS +E+ +++ ++ SPE+ K + ++ +T
Sbjct: 104 AFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF--S 75
++++F D + G I+ DELKD L+ +GS+ E+K +MD D D G ID+ EF +
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84
Query: 76 TFH 78
T H
Sbjct: 85 TVH 87
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 90 LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
LK+ F + D D +G I+ +EL LK++G + + +++ D D G +++ EF
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 43 RSLGSKTSPEEV---KRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDM 99
+ + + S EE+ K + IDTD G I F E GS E+KD D D+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 100 DQNGLISANELHAV 113
D++G I E A
Sbjct: 71 DKSGTIDYGEFIAA 84
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
E ++ F FDK+ D K++A+EL V+R+LG+ + +++ ++ + D D G D + F T
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Query: 77 FHLAGGS 83
L G
Sbjct: 75 IMLEYGQ 81
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 83 STDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVN 142
+ + +E K+AF L+D D + ++A EL V++ LG + + ++K D D G +
Sbjct: 9 TAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFD 68
Query: 143 FEEFKKMM 150
E F +M
Sbjct: 69 QETFLTIM 76
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYID 70
S D+V+KVF+ DK+ G I DEL +L+ S S +E K +M D DGDG I
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIG 98
Query: 71 FKEFSTF 77
+EFST
Sbjct: 99 VEEFSTL 105
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 50 SPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE 109
S E++K+ + T D + D K+F F + G ++K F + D D++G I +E
Sbjct: 7 SAEDIKKAIGAF-TAADSF-DHKKF--FQMVGLKKKSADDVKKVFHILDKDKSGFIEEDE 62
Query: 110 LHAVLKKLGEKS---SLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
L ++LK + S K+ ++ D DGDG + EEF ++ S
Sbjct: 63 LGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+E+ +F FDKN DG I +ELK +L++ G + ++++ +M + D + DG ID+ EF
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 76 TF 77
F
Sbjct: 70 EF 71
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
+EL D F ++D + +G I EL +L+ GE + D ++K D + DG ++++EF
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 148 KMM 150
+ M
Sbjct: 70 EFM 72
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYID 70
S D+V+KVF+ DK+ G I DEL +L+ S S +E K +M D DGDG I
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 98
Query: 71 FKEFSTF 77
+EFST
Sbjct: 99 VEEFSTL 105
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 50 SPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE 109
S E++K+ + T D + D K+F F + G ++K F + D D++G I +E
Sbjct: 7 SAEDIKKAIGAF-TAADSF-DHKKF--FQMVGLKKKSADDVKKVFHILDKDKSGFIEEDE 62
Query: 110 LHAVLKKLGEKS---SLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
L ++LK + S K+ ++ D DGDG + EEF ++ S
Sbjct: 63 LGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYID 70
S D+V+KVF+ DK+ G I DEL +L+ S S +E K +M D DGDG I
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 71 FKEFSTF 77
+EFST
Sbjct: 63 VEEFSTL 69
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKS---SLKDCVNMIKKVDADGDGHVNFEE 145
++K F + D D++G I +EL ++LK + S K+ ++ D DGDG + EE
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 146 FKKMMTRS 153
F ++ S
Sbjct: 66 FSTLVAES 73
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 67 GYIDFKEFSTFHLAG--GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL---GEKS 121
G D+K F FHL G G TD ++K+ F++ D DQ+G I EL VLK G
Sbjct: 22 GTFDYKRF--FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77
Query: 122 SLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
+ + ++ D+D DG + +EF KM+ ++
Sbjct: 78 NDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSL---GSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+V++VF DK+ G I +ELK VL+ G + E K ++ D+D DG I E
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
Query: 74 FS 75
F+
Sbjct: 102 FA 103
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 19/120 (15%)
Query: 14 SMDEVRKVFNKF---DKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
+D+ +++ F D++ G + +EL G + SP+ R+M DTD +G+I
Sbjct: 46 PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHIS 105
Query: 71 FKEFSTFHLAGGSTDGTKELKDAFDLYDMD---QNGLISANELHAVLKKLG----EKSSL 123
F EF + K ++ A++L+ M+ ++G + +E+ L++LG +++SL
Sbjct: 106 FYEFMAMY---------KFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSL 156
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 98 DMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKM 149
D D++G + NEL G + S + + M++ D D +GH++F EF M
Sbjct: 61 DRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 19/120 (15%)
Query: 14 SMDEVRKVFNKF---DKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
+D+ +++ F D++ G + +EL G + SP+ R+M DTD +G+I
Sbjct: 46 PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHIS 105
Query: 71 FKEFSTFHLAGGSTDGTKELKDAFDLYDM---DQNGLISANELHAVLKKLG----EKSSL 123
F EF + K ++ A++L+ M +++G + +E+ L++LG +++SL
Sbjct: 106 FYEFMAMY---------KFMELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYINQRTSL 156
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 98 DMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKM 149
D D++G + NEL G + S + + M++ D D +GH++F EF M
Sbjct: 61 DRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYID 70
S D+V+KVF+ DK+ G I DEL +L+ S S +E K +M D DG G I+
Sbjct: 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIE 98
Query: 71 FKEFSTF 77
+EFST
Sbjct: 99 VEEFSTL 105
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 50 SPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE 109
S E++K+ + T D + D K+F F + G ++K F + D D++G I +E
Sbjct: 7 SAEDIKKAIGAF-TAADSF-DHKKF--FQMVGLKKKSADDVKKVFHILDKDKSGFIEEDE 62
Query: 110 LHAVLKKLGEKS---SLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
L ++LK + S K+ ++ D DG G + EEF ++ S
Sbjct: 63 LGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEFSTLVAES 109
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 14 SMDEVRKVFNKFDKNGD-GKISADELKDVLRSLGSKTSPEE-VKRVMDEIDTDGDGYIDF 71
S +E+ + F K+ G+I+ + + + T P+ + V D++ DG +DF
Sbjct: 31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDF 90
Query: 72 KEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVL 114
KE+ + ++L+ AF LYD+D NG IS NE+ ++
Sbjct: 91 KEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 133
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 29/42 (69%)
Query: 22 FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
F+ +D +G+G IS +E+ +++ ++ +PE+VK + D+ +T
Sbjct: 113 FSLYDVDGNGTISKNEVLEIVXAIFKXITPEDVKLLPDDENT 154
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 81 GGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGH 140
G D +E+ AF L+D D +G I+ +L V K+LGE + ++ MI + D + D
Sbjct: 2 SGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNE 61
Query: 141 VNFEEFKKMMTRS 153
++ +EF ++M ++
Sbjct: 62 IDEDEFIRIMKKT 74
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 8 GANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDG 67
G+ S +E+ K F FD + G I+ +L+ V + LG + EE++ ++ E D + D
Sbjct: 1 GSGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 68 YIDFKEF 74
ID EF
Sbjct: 61 EIDEDEF 67
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 29/158 (18%)
Query: 19 RKVFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKR--VMDEIDTDGDG---- 67
+ +F+ D NG+GKI+ DE+ D+ L + +PE+ KR V E G G
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKL--EATPEQTKRHQVCVEAFFRGCGMEYG 80
Query: 68 -------YID-FKEFSTFHL---AGGSTDGTKELKDA-FDLYDMDQNGLISANELHAVLK 115
++D FK+ +T L A +E DA FD++D D +G I+ +E A K
Sbjct: 81 KEIAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGK 140
Query: 116 KLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
G S +DC + D D G ++ +E MTR
Sbjct: 141 ISGISPSQEDCEATFRHCDLDNSGDLDVDE----MTRQ 174
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
VF+ FDK+G G I+ DE K + G S E+ + D D G +D E + HL
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLG 177
Query: 81 GGST 84
T
Sbjct: 178 FWYT 181
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 20 KVFNKFDKNGDGKISADELKD----VLRSLGSKTS--PEEVKRVMDEID-----TDGDGY 68
++F +FD NG GK+ E+ D +L+ L T+ P+ V+R D+ G G
Sbjct: 55 ELFKQFDTNGTGKLGFREVLDGCYGILK-LDEFTTHLPDIVQRAFDKAKDLGNKVKGVGE 113
Query: 69 IDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKS-SLKDCV 127
D EF F L EL FD D D + L+ E L KL E + D
Sbjct: 114 EDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDAT 173
Query: 128 NMIKKVDADGDGHVNFEEF 146
+ ++D +G G V F+EF
Sbjct: 174 TVFNEIDTNGSGVVTFDEF 192
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 11 YLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSK-TSPEEVKRVMDEIDTDGDGYI 69
Y+ + E+ +F+ DK+G + E K+ L L + V +EIDT+G G +
Sbjct: 128 YIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVV 187
Query: 70 DFKEFSTFHLA 80
F EFS + +
Sbjct: 188 TFDEFSCWAVT 198
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFK 72
S+ + F D+N G +S +L+ + G+ R+++ DG +DF
Sbjct: 26 ASLLRLHHRFRALDRNKKGYLSRMDLQQI----GALAVNPLGDRIIESFFPDGSQRVDFP 81
Query: 73 EFSTF--HLAGGSTDGTK---------------ELKDAFDLYDMDQNGLISANELHAVLK 115
F H + T+ +L AF LYD+D++G IS +E+ VL+
Sbjct: 82 GFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLR 141
Query: 116 KL-GEKSSLKDCVNM----IKKVDADGDGHVNFEEFKKMM 150
+ G + + + N+ +++ D DGDG V+F EF K +
Sbjct: 142 LMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 20/106 (18%)
Query: 57 VMDEIDTDGDGYIDFKEFSTFHLAGGST--DGT--KELKDAFDLYDMDQNGLISANELHA 112
+ + D DG+G I F++F + G S GT ++LK AF+LYD++++G I+ E+ A
Sbjct: 134 LFNAFDADGNGAIHFEDF----VVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLA 189
Query: 113 VLKK------------LGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
++K L E + L+ +K+D + DG V +EF
Sbjct: 190 IMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 13 GSMDEVRKVFNKFDKNGDGKISADEL 38
++ V + F K D+N DG ++ DE
Sbjct: 210 APLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 14 SMDEVRKVFNKFDKNG-----DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGY 68
S+ E+ ++ F K DG I+ +E + L K S RV D DT +G
Sbjct: 12 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF-ADRVFDLFDTKHNGI 70
Query: 69 IDFKEF----STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANEL-HAVLKKLGEK-SS 122
+ F+EF S FH D ++ +F LYD+ Q G I E+ V+ L E +
Sbjct: 71 LGFEEFARALSVFHPNAPIDD---KIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMN 127
Query: 123 LKDCV------NMIKKVDADGDGHVNFEEFKKMMTR 152
LKD V ++ D DG ++ EE++ ++ R
Sbjct: 128 LKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 163
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSL---KDCVNMIKKV 133
F ++G S + +LK+ F + D DQ+G I +EL L++ + + + +
Sbjct: 30 FQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAA 89
Query: 134 DADGDGHVNFEEFKKMM 150
D DGDG + EEF++M+
Sbjct: 90 DHDGDGKIGAEEFQEMV 106
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 7 NGANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRS 44
+GA L + E + D +GDGKI A+E +++++S
Sbjct: 72 SGARVL-TASETKTFLAAADHDGDGKIGAEEFQEMVQS 108
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 20 KVFNKFDKNGDGKISADELK----DVLRSLGSKTSPEE--VKRVMDEIDTDGD-----GY 68
++F KFDKN GK+ DE+ +VL+ L TS KR D+ T G G
Sbjct: 52 ELFKKFDKNETGKLXYDEVYSGCLEVLK-LDEFTSRVRDITKRAFDKSRTLGSKLENKGS 110
Query: 69 IDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL-GEKSSLKDCV 127
DF EF F L EL FD D N L+ E + KL + ++D
Sbjct: 111 EDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPA 170
Query: 128 NMIKKVDADGDGHVNFEEF 146
+ K++D +G G V F+EF
Sbjct: 171 ALFKELDKNGTGSVTFDEF 189
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 11 YLGSMDEVRKVFNKFDKNGDGKISADELKDV---LRSLGSKTSPEEVKRVMDEIDTDGDG 67
Y+ E+ +F++ D +G+ + +E K L + G+K E+ + E+D +G G
Sbjct: 125 YIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKV--EDPAALFKELDKNGTG 182
Query: 68 YIDFKEFSTFHLA 80
+ F EF+ + A
Sbjct: 183 SVTFDEFAAWASA 195
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 14 SMDEVRKVFNKFDKNG-----DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGY 68
S+ E+ ++ F K DG I+ +E + L K S RV D DT +G
Sbjct: 43 SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF-ADRVFDLFDTKHNGI 101
Query: 69 IDFKEF----STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANEL-HAVLKKLGEKS-S 122
+ F+EF S FH D ++ +F LYD+ Q G I E+ V+ L E +
Sbjct: 102 LGFEEFARALSVFHPNAPIDD---KIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMN 158
Query: 123 LKDCV------NMIKKVDADGDGHVNFEEFKKMMTR 152
LKD V ++ D DG ++ EE++ ++ R
Sbjct: 159 LKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 194
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 37/162 (22%)
Query: 19 RKVFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKR--VMDEIDTDGDGY--- 68
+ +F+ D NG+GKI+ DE+ D+ L + +PE+ KR V E G G
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKL--EATPEQTKRHQVCVEAFFRGCGMEYG 80
Query: 69 --IDFKEFSTFHLAGGSTDGTKELKD---------------AFDLYDMDQNGLISANELH 111
I F +F L G T ELK FD++D D +G I+ +E
Sbjct: 81 KEIAFPQF----LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 112 AVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
A K G S +DC + D D G ++ +E MTR
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE----MTRQ 174
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
VF+ FDK+G G I+ DE K + G S E+ + D D G +D E + HL
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLG 177
Query: 81 GGST 84
T
Sbjct: 178 FWYT 181
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 37/162 (22%)
Query: 19 RKVFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKR--VMDEIDTDGDGY--- 68
+ +F+ D NG+GKI+ DE+ D+ L + +PE+ KR V E G G
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKL--EATPEQTKRHQVCVEAFFRGCGMEYG 80
Query: 69 --IDFKEFSTFHLAGGSTDGTKELKD---------------AFDLYDMDQNGLISANELH 111
I F +F L G T ELK FD++D D +G I+ +E
Sbjct: 81 KEIAFPQF----LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 112 AVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
A K G S +DC + D D G ++ +E MTR
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE----MTRQ 174
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
VF+ FDK+G G I+ DE K + G S E+ + D D G +D E + HL
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLG 177
Query: 81 GGST 84
T
Sbjct: 178 FWYT 181
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 43.5 bits (101), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
M+E R FN FD+ G + ++ + L S+G E R+M +D + G + F+ F
Sbjct: 724 MNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAF 783
Query: 75 STF-HLAGGSTDGTKELKDAFDLYDMDQNGLISANEL 110
F TD ++ +F + D+N I+ +EL
Sbjct: 784 IDFMSRETADTDTADQVMASFKILAGDKN-YITVDEL 819
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 56 RVMDEIDTDGDGYIDFKEFS----TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELH 111
R+ D D +G I+F EF FH S +++K AF LYD+ Q G I EL
Sbjct: 78 RIFDVFDVKRNGVIEFGEFVRSLGVFH---PSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 112 AVLKKLGEKSSLKDCVNMIK--------KVDADGDGHVNFEEFKKMMT 151
++ L +S L +MI+ + D DG ++ +E+K ++
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 56 RVMDEIDTDGDGYIDFKEFS----TFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELH 111
R+ D D +G I+F EF FH S +++K AF LYD+ Q G I EL
Sbjct: 78 RIFDVFDVKRNGVIEFGEFVRSLGVFH---PSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 112 AVLKKLGEKSSLKDCVNMIK--------KVDADGDGHVNFEEFKKMMT 151
++ L +S L +MI+ + D DG ++ +E+K ++
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 37/162 (22%)
Query: 19 RKVFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKR--VMDEIDTDGDGY--- 68
+ +F+ D NG+GKI+ DE+ D+ L + +PE+ KR V E G G
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKL--EATPEQTKRHQVCVEAFFRGCGMEYG 80
Query: 69 --IDFKEFSTFHLAGGSTDGTKELKD---------------AFDLYDMDQNGLISANELH 111
I F +F L G T ELK FD++D D +G I+ +E
Sbjct: 81 KEIAFPQF----LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 112 AVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
A K G S +DC + D D G ++ +E MTR
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE----MTRQ 174
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
VF+ FDK+G G I+ DE K + G S E+ + D D G +D E + HL
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 177
Query: 81 GGST 84
T
Sbjct: 178 FWYT 181
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF 77
+ ++F K D N +G +S E+ VL S+G K ++ R++ +D + G I + EF
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNITYTEF--- 95
Query: 78 HLAGGSTDGTKE---LKDAFDLYDMDQNGLISANEL 110
+AG E LK AF+ D D++G IS +++
Sbjct: 96 -MAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDI 130
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 37/162 (22%)
Query: 19 RKVFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKR--VMDEIDTDGDGY--- 68
+ +F+ D NG+GKI+ DE+ D+ L + +PE+ KR V E G G
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKL--EATPEQTKRHQVCVEAFFRGCGMEYG 80
Query: 69 --IDFKEFSTFHLAGGSTDGTKELKD---------------AFDLYDMDQNGLISANELH 111
I F +F L G T ELK FD++D D +G I+ +E
Sbjct: 81 KEIAFPQF----LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 112 AVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
A K G S +DC + D D G ++ +E MTR
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE----MTRQ 174
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
VF+ FDK+G G I+ DE K + G S E+ + D D G +D E + HL
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTRQHLG 177
Query: 81 GGST 84
T
Sbjct: 178 FWYT 181
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYID 70
S D+V+KVF+ DK+ G I DEL +L+ S +E K +M D DGDG I
Sbjct: 40 SADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIG 99
Query: 71 FKEFSTF 77
EFST
Sbjct: 100 VDEFSTL 106
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 69 IDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKS---SLKD 125
D K+F F + G ++K F + D D++G I +EL +LK + S K+
Sbjct: 25 FDHKKF--FQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKE 82
Query: 126 CVNMIKKVDADGDGHVNFEEFKKMMTRS 153
++ D DGDG + +EF ++ S
Sbjct: 83 TKMLMAAGDKDGDGKIGVDEFSTLVAES 110
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 17 EVRKVFNKFDKN-GDGKISADELKDVLRSLGSKTSPEEVKR-VMDEIDTDGDGYIDFKEF 74
EV++ + F K+ G++ A + + + P + V + D + DG I+F EF
Sbjct: 26 EVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEF 85
Query: 75 STFHLAGGSTDGT--KELKDAFDLYDMDQNGLISANEL----HAVLKKLGEKSSLKDCVN 128
++ GT ++L+ AF LYD+D +G I+ NE+ A+ + +G L + N
Sbjct: 86 --IQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEEN 143
Query: 129 MIKK--------VDADGDGHVNFEEFKK 148
+K +D + DG + +EF++
Sbjct: 144 TPEKRVDRIFAMMDKNADGKLTLQEFQE 171
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVK 55
V ++F DKN DGK++ E ++ GSK P V+
Sbjct: 149 VDRIFAMMDKNADGKLTLQEFQE-----GSKADPSIVQ 181
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
K F FDK GK+S +L+ +L LG K + EV ++ ++ D +G ID+K+F
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 7 NGANYLGSMDEVRKVFNKF-DKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDG 65
NGA ++++ + KF ++ G + E K + ++ + + V+ + DT+G
Sbjct: 13 NGAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNG 72
Query: 66 DGYIDFKEF-STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL------- 117
D IDF E+ + +L T K LK F +YD D+NG I EL +++ +
Sbjct: 73 DNTIDFLEYVAALNLVLRGTLEHK-LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKAC 131
Query: 118 ---------GEKSSLKDCVNMI-KKVDADGDGHVNFEEF 146
G+ + ++ V+ I VD +GDG ++ EF
Sbjct: 132 SVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 29/156 (18%)
Query: 21 VFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKRVMDEIDTDGDGY------- 68
+F+ D NG+G+I+ DE+ D+ ++LG+ +P + +R D ++ G
Sbjct: 25 MFDYLDINGNGQITLDEIVSKASDDICKNLGA--TPAQTQRHQDCVEAFFRGCGLEYGKE 82
Query: 69 IDFKEF----------STFHLAGGSTDGTKELKDA-FDLYDMDQNGLISANELHAVLKKL 117
F EF A +E DA FD++D D +G I+ +E A +
Sbjct: 83 TKFPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRIS 142
Query: 118 GEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
G S +DC + D D G ++ +E MTR
Sbjct: 143 GISPSEEDCEKTFQHCDLDNSGELDVDE----MTRQ 174
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHL 79
VF+ FDK+G G I+ DE K R G S E+ ++ D D G +D E + HL
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTRQHL 176
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 39/60 (65%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++E+R+ F +FDK+ DG I+ +L + +R++G + E+ + +I+ + G++DF +F
Sbjct: 9 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 68
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 41/64 (64%)
Query: 87 TKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+EL++AF +D D++G I+ +L ++ +G + + + + ++++ + GHV+F++F
Sbjct: 9 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 68
Query: 147 KKMM 150
++M
Sbjct: 69 VELM 72
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT--------SPEEVKRVMDEIDTDGDG 67
D VR++F + D +ISA EL+ +LR + +K S E K ++D +D+DG G
Sbjct: 531 DGVRRLFAQL-AGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSG 589
Query: 68 YIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV 127
+ KEF ++ + + D+D++G +++ E+ L++ G K +
Sbjct: 590 KLGLKEFYILWTK------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQ 643
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTR 152
++ + AD ++F+ F + + R
Sbjct: 644 VIVARF-ADDQLIIDFDNFVRCLVR 667
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 87 TKELKDAFDLY---DMDQNGLISANELHAVLKKLGEKSSLKDCVN---MIKKVDADGDGH 140
+E+K AF+++ + D N IS EL V++ LG S LK MI++VD +GDG
Sbjct: 4 PEEIKGAFEVFAAKEGDPNQ-ISKEELKLVMQTLG-PSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 141 VNFEEFKKMMTR 152
V+FEEF MM +
Sbjct: 62 VSFEEFLVMMKK 73
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 12/69 (17%)
Query: 14 SMDEVRKVFNKFD-KNGDG-KISADELKDVLRSLGSKTSPEEVK------RVMDEIDTDG 65
S +E++ F F K GD +IS +ELK V+++LG P +K +++E+D +G
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLG----PSLLKGMSTLDEMIEEVDKNG 58
Query: 66 DGYIDFKEF 74
DG + F+EF
Sbjct: 59 DGEVSFEEF 67
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 8 GANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSL 45
G + L M + ++ + DKNGDG++S +E +++ +
Sbjct: 37 GPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
M E+++ F D+N DG I ++LK+ SLG +E+ ++ E G ++F F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKE----APGPLNFTMF 56
Query: 75 -STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKV 133
S F TD + +++AF ++D D ++ + +L+ +G+ + + K+
Sbjct: 57 LSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 116
Query: 134 DADGDGHVNFEEFKKMM 150
+G G ++ F M+
Sbjct: 117 PVEG-GKFDYVRFVAMI 132
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S + +R F FD++ K++ + +KD+L ++G + +E++ E +G G D+
Sbjct: 69 SEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVR 127
Query: 74 F 74
F
Sbjct: 128 F 128
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSL---GSKTSPEEVKRVMDEIDTDGDGYID 70
S ++V+KVF D + G I +ELK VL+S G + E K + D DGDG I
Sbjct: 40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIG 99
Query: 71 FKEFSTF 77
EF T
Sbjct: 100 IDEFETL 106
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 39 KDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYD 98
KD+L++ +++K+ +D + +G + K+F F L G ++K F D
Sbjct: 4 KDLLKA-------DDIKKALDAVKAEGS--FNHKKF--FALVGLKAMSANDVKKVFKAID 52
Query: 99 MDQNGLISANELHAVLKKL---GEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
D +G I EL VLK G + + +K D DGDG + +EF+ ++ +
Sbjct: 53 ADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 39.7 bits (91), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT--------SPEEVKRVMDEIDTDGDG 67
D R++F + D +ISA EL+ +LR + +K S E K ++D +D DG G
Sbjct: 532 DGFRRLFAQL-AGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSG 590
Query: 68 YIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV 127
+ KEF ++ + + D+D++G +++ E+ L++ G K +
Sbjct: 591 KLGLKEFYILWTK------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQ 644
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTR 152
++ + AD + ++F+ F + + R
Sbjct: 645 VIVARF-ADDELIIDFDNFVRCLVR 668
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST- 76
V+ + DKN DG+I+ADE L +LG S E +++DT+G+G + E T
Sbjct: 104 VKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTA 161
Query: 77 ---FHL 79
FH
Sbjct: 162 VRDFHF 167
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLR 43
S E + FN+ D NG+G++S DEL +R
Sbjct: 134 SKAEAAEAFNQVDTNGNGELSLDELLTAVR 163
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 39.3 bits (90), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT--------SPEEVKRVMDEIDTDGDG 67
D R++F + D +ISA EL+ +LR + +K S E K ++D +D DG G
Sbjct: 532 DGFRRLFAQL-AGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSG 590
Query: 68 YIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV 127
+ KEF ++ + + D+D++G +++ E+ L++ G K +
Sbjct: 591 KLGLKEFYILWTK------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQ 644
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTR 152
++ + AD + ++F+ F + + R
Sbjct: 645 VIVARF-ADDELIIDFDNFVRCLVR 668
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 39.3 bits (90), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT--------SPEEVKRVMDEIDTDGDG 67
D R++F + D +ISA EL+ +LR + +K S E K ++D +D DG G
Sbjct: 532 DGFRRLFAQL-AGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSG 590
Query: 68 YIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV 127
+ KEF ++ + + D+D++G +++ E+ L++ G K +
Sbjct: 591 KLGLKEFYILWTK------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQ 644
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTR 152
++ + AD + ++F+ F + + R
Sbjct: 645 VIVARF-ADDELIIDFDNFVRCLVR 668
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
+F + D NGDG +S +E+K + + + + ++ + ID DG+G ID EF+ F+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 57 VMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANEL 110
+ EID +GDG + ++E F + + L+ F D D NG I NE
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ K++D +GDG V++EE K +++
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSK 28
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 94 FDLYDMDQNGLISANELHAVLKKLGEKSSLKD--CVNMI-KKVDADGDGHVNFEEFKKM 149
F D++ +G +S E+ A + K K ++K+ + +I K +DADG+G ++ EF K
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSK---KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL---GEKSSLKDCVNMIKKV 133
F +G S ++KD F D DQ+G + EL L+K + + + +++
Sbjct: 31 FQTSGLSKMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAA 90
Query: 134 DADGDGHVNFEEFKKMM 150
D DGDG + EEF++M+
Sbjct: 91 DNDGDGKIGAEEFQEMV 107
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKR--------VMDEIDTDGDG 67
+ +R F+ DKN DG+++A+E+K+++ S ++K +M+E+D G
Sbjct: 98 NRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLG 157
Query: 68 YIDFKEFSTFHLAGGS 83
YI+ ++ L S
Sbjct: 158 YIEMEDLEALLLQSPS 173
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
M E+++ F D+N DG I ++LK++ SLG +E+ ++ E G ++F F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMF 77
Query: 75 -STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKV 133
S F TD + +++AF ++D ++ + +L+ +G+ + + K+
Sbjct: 78 LSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 137
Query: 134 DADGDGHVNFEEFKKMM 150
+G G ++ F M+
Sbjct: 138 PVEG-GKFDYVRFVAMI 153
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S + +R F FD+ K++ + +KD+L ++G + +E++ E +G G D+
Sbjct: 90 SEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVR 148
Query: 74 FSTFHLAGGSTDG 86
F G D
Sbjct: 149 FVAMIKGSGDDDA 161
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 8 GANYLGSMDEVRKVFNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDE 60
G+ +M+ + VF+ K GD K+S ELK++L++ L ++ + V +VM E
Sbjct: 1 GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDADAVDKVMKE 60
Query: 61 IDTDGDGYIDFKEF 74
+D DGDG +DF+E+
Sbjct: 61 LDEDGDGEVDFQEY 74
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
M E+++ F D+N DG I ++LK++ SLG +E+ ++ E G ++F F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMF 77
Query: 75 -STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKV 133
S F TD + +++AF ++D ++ + +L+ +G+ + + K+
Sbjct: 78 LSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 137
Query: 134 DADGDGHVNFEEFKKMM 150
+G G ++ F M+
Sbjct: 138 PVEG-GKFDYVRFVAMI 153
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S + +R F FD+ K++ + +KD+L ++G + +E++ E +G G D+
Sbjct: 90 SEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVR 148
Query: 74 FSTFHLAGGSTDG 86
F G D
Sbjct: 149 FVAMIKGSGDDDA 161
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+ +R VF D N G++ +E + + L + P + + V +D D DG I F+EF
Sbjct: 26 LARLRSVFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAITFQEF 83
Query: 75 S 75
+
Sbjct: 84 A 84
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDAD 136
F A G + L+ F D +++G + E A+ +L + + D + +++DAD
Sbjct: 16 FQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPA--DAEAVFQRLDAD 73
Query: 137 GDGHVNFEEFKK 148
DG + F+EF +
Sbjct: 74 RDGAITFQEFAR 85
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 13/78 (16%)
Query: 10 NYLGSMDE-VRKVFNKFDKNGDGKISADELKDVLRSL----GSKTSP--------EEVKR 56
+++G++ E ++ FN +D N DG I+ +E+ +++S+ G T P E V+R
Sbjct: 2 SHMGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVER 61
Query: 57 VMDEIDTDGDGYIDFKEF 74
+++D + DG + +EF
Sbjct: 62 FFEKMDRNQDGVVTIEEF 79
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 14/79 (17%)
Query: 82 GSTDGT--KELKDAFDLYDMDQNGLISANELHAVLKK------------LGEKSSLKDCV 127
GS GT ++LK AF+LYD++++G I+ E+ A++K L E + +
Sbjct: 1 GSHMGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVE 60
Query: 128 NMIKKVDADGDGHVNFEEF 146
+K+D + DG V EEF
Sbjct: 61 RFFEKMDRNQDGVVTIEEF 79
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLR---SLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+F+K+ + GD +S ELK++++ ++GSK E+ R+M+++D + D ++F+E+
Sbjct: 15 IFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
Query: 76 TF 77
TF
Sbjct: 75 TF 76
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 8 GANYLGSMDEVRKVFNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDE 60
G+ +M+ + VF+ K GD K+S ELKD+L++ L + + V ++M E
Sbjct: 1 GSELETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKE 60
Query: 61 IDTDGDGYIDFKEF 74
+D +GDG +DF+EF
Sbjct: 61 LDENGDGEVDFQEF 74
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 NGANYLGSM-DEVRKVFNKFDKNGDGKISADELKDVLRSL-GSKTSPEEV----KRVMDE 60
NG L S +++ F +D + D KIS DEL VLR + G S E++ R + E
Sbjct: 103 NGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQE 162
Query: 61 IDTDGDGYIDFKEF 74
D DGD I F EF
Sbjct: 163 ADQDGDSAISFTEF 176
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 93 AFDLYDMDQNGLISANELHAVLKKL-------GEKSSLKDCVNMIKKVDADGDGHVNFEE 145
AF LYD+D++ IS +EL VL+ + + S+ D I++ D DGD ++F E
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIAD--RTIQEADQDGDSAISFTE 175
Query: 146 FKKMMTR 152
F K++ +
Sbjct: 176 FVKVLEK 182
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSL---KDCVNMIK 131
S F G S+ ++K F + D D++G I EL LK + + + +
Sbjct: 28 SFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLA 87
Query: 132 KVDADGDGHVNFEEFKKMM 150
D DGDG + EEF+ ++
Sbjct: 88 AGDTDGDGKIGVEEFQSLV 106
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYIDFK 72
D+++KVF D++ G I +EL+ L++ S + E K + DTDGDG I +
Sbjct: 41 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 100
Query: 73 EFSTF 77
EF +
Sbjct: 101 EFQSL 105
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 45 LGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF---HLAGGSTDGTKELKDAFDLYDMDQ 101
L SKT P+++K+V +D D G+I+ +E F + + E K D D
Sbjct: 35 LSSKT-PDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDG 93
Query: 102 NGLISANELHAVLK 115
+G I E +++K
Sbjct: 94 DGKIGVEEFQSLVK 107
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYI---DFKEF 74
+R+ F K D +GDG++ ++E++ L S G + S + + +M + D G + D+ E
Sbjct: 95 MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVEL 154
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLIS 106
S F +++ F YD ++ G ++
Sbjct: 155 SIF---------VCRVRNVFAFYDRERTGQVT 177
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 2 AANNSNGANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEI 61
AA +S G + S+ K+ + +DKN G+I+ DE KD+ + S ++ +
Sbjct: 51 AALSSAGVPF--SLATTEKLLHMYDKNHSGEITFDEFKDLHHFILS------MREGFRKR 102
Query: 62 DTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNG 103
D+ GDG +D E L+ G + + +D + G
Sbjct: 103 DSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRG 144
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 12/105 (11%)
Query: 52 EEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANE-- 109
+E+ +DTDG G I E + + G + +YD + +G I+ +E
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 110 -LHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
LH + + E +K D+ GDG ++ E + + S
Sbjct: 87 DLHHFILSMREG---------FRKRDSSGDGRLDSNEVRAALLSS 122
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+E+K+AF + D+D++G +S ++ A+ ++LG K+ M+K + G +NF F
Sbjct: 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMF 72
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E+++ F+ D + DG +S +++K + LG +E+ ++ E G ++F
Sbjct: 16 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTM 71
Query: 74 F-STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F S F TD + +++AF ++D + ++ + +L+ +G+ + + K+
Sbjct: 72 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 131
Query: 133 VDADGDGHVNFEEFKKMM 150
+G G ++ +F M+
Sbjct: 132 APVEG-GKFDYVKFTAMI 148
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 21 VFNKFD-KNGDGK-ISADELKDVLR---SLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+F+K+ K GD +S ELK++++ ++GSK E+ ++MD++D + D ++F+E+
Sbjct: 15 IFHKYSGKEGDKHTLSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYI 74
Query: 76 TF 77
TF
Sbjct: 75 TF 76
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+E+K+AF + D+D++G +S ++ A+ ++LG K+ M+K + G +NF F
Sbjct: 6 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMF 60
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E+++ F+ D + DG +S +++K + LG +E+ ++ E G ++F
Sbjct: 4 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTM 59
Query: 74 F-STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F S F TD + +++AF ++D + ++ + +L+ +G+ + + K+
Sbjct: 60 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 119
Query: 133 VDADGDGHVNFEEFKKMM 150
+G G ++ +F M+
Sbjct: 120 APVEG-GKFDYVKFTAMI 136
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 75 STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSL---KDCVNMIK 131
S F G S+ ++K F + D D++G I EL LK + + + +
Sbjct: 29 SFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLA 88
Query: 132 KVDADGDGHVNFEEFKKMM 150
D DGDG + EEF+ ++
Sbjct: 89 AGDTDGDGKIGVEEFQSLV 107
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYIDFK 72
D+++KVF D++ G I +EL+ L++ S + E K + DTDGDG I +
Sbjct: 42 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVE 101
Query: 73 EFSTF 77
EF +
Sbjct: 102 EFQSL 106
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 45 LGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF---HLAGGSTDGTKELKDAFDLYDMDQ 101
L SKT P+++K+V +D D G+I+ +E F + + E K D D
Sbjct: 36 LSSKT-PDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDG 94
Query: 102 NGLISANELHAVLK 115
+G I E +++K
Sbjct: 95 DGKIGVEEFQSLVK 108
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+E+K+AF + D+D++G +S ++ A+ ++LG K+ M+K + G +NF F
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMF 61
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E+++ F+ D + DG +S +++K + LG +E+ ++ E G ++F
Sbjct: 5 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTM 60
Query: 74 F-STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F S F TD + +++AF ++D + ++ + +L+ +G+ + + K+
Sbjct: 61 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 120
Query: 133 VDADGDGHVNFEEFKKMM 150
+G G ++ +F M+
Sbjct: 121 APVEG-GKFDYVKFTAMI 137
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S + +R F FD+ K++ + +KD+L ++G + +E++ E +G G D+ +
Sbjct: 74 SEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVK 132
Query: 74 FSTFHLAGGSTDG 86
F+ G +
Sbjct: 133 FTAMIKGSGEEEA 145
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL---GEKSSLKDCVNMIKKV 133
F +G S ++KD F D DQ+G + +EL L+K + + + +++
Sbjct: 30 FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAA 89
Query: 134 DADGDGHVNFEEFKKMM 150
D DGDG + +EF++M+
Sbjct: 90 DNDGDGKIGADEFQEMV 106
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 47 SKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTK----ELKDAFDLYDMDQN 102
SK S +VK + ID D GY+D E F L +D + E K D D D +
Sbjct: 36 SKMSASQVKDIFRFIDNDQSGYLDGDELKYF-LQKFQSDARELTESETKSLMDAADNDGD 94
Query: 103 GLISANELHAVL 114
G I A+E ++
Sbjct: 95 GKIGADEFQEMV 106
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRS 44
E + + + D +GDGKI ADE ++++ S
Sbjct: 81 ETKSLMDAADNDGDGKIGADEFQEMVHS 108
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+E+K+AF + D+D++G +S ++ A+ ++LG K+ M+K + G +NF F
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMF 61
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E+++ F+ D + DG +S +++K + LG +E+ ++ E G ++F
Sbjct: 5 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTM 60
Query: 74 F-STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F S F TD + +++AF ++D + ++ + +L+ +G+ + + K+
Sbjct: 61 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 120
Query: 133 VDADGDGHVNFEEFKKMM 150
+G G ++ +F M+
Sbjct: 121 APVEG-GKFDYVKFTAMI 137
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+++ ++ F D+N DG I D+L++ ++G E +D + + G I+F F
Sbjct: 24 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVF 80
Query: 75 ST-FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKV 133
T F D + AF + D D G I + L +L G + + ++ NM
Sbjct: 81 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 140
Query: 134 DADGDGHVNFEEFKKMMT 151
D G+V+++ ++T
Sbjct: 141 PPDVAGNVDYKNICYVIT 158
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 88 KELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
+E+K+AF + D+D++G +S ++ A+ ++LG K+ M+K + G +NF F
Sbjct: 4 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMF 58
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E+++ F+ D + DG +S +++K + LG +E+ ++ E G ++F
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTM 57
Query: 74 F-STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F S F TD + +++AF ++D + ++ + +L+ +G+ + + K+
Sbjct: 58 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 117
Query: 133 VDADGDGHVNFEEFKKMM 150
+G G ++ +F M+
Sbjct: 118 APVEG-GKFDYVKFTAMI 134
>pdb|2Y5I|A Chain A, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|B Chain B, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|C Chain C, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|D Chain D, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|E Chain E, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|F Chain F, S100z From Zebrafish In Complex With Calcium
Length = 99
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 13 GSMDEVRKVFNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDG 65
G+MD + VF+ + GD K+S ELK++L + L S+ P V+++M+++D++
Sbjct: 7 GAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNK 66
Query: 66 DGYIDFKEF 74
D +DF EF
Sbjct: 67 DNEVDFNEF 75
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
+++ ++ F D+N DG I D+L++ ++G E +D + + G I+F F
Sbjct: 6 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVF 62
Query: 75 ST-FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKV 133
T F D + AF + D D G I + L +L G + + ++ NM
Sbjct: 63 LTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 122
Query: 134 DADGDGHVNFEEFKKMMTR 152
D G+V+++ ++T
Sbjct: 123 PPDVAGNVDYKNICYVITH 141
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHL 79
+ F + D++G + ADE + L LG E + V + D +G G +D +EF
Sbjct: 41 RFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALR 100
Query: 80 AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLK-------KLGEKSSLKDCVNMIKK 132
S + AF D +G+++ ++L V + GE + + +
Sbjct: 101 PPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDN 160
Query: 133 VD-ADGDGHVNFEEFK 147
D ++ DG V EF+
Sbjct: 161 FDSSEKDGQVTLAEFQ 176
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 18 VRKVFNKFDKNGDGKISADELKDV--------LRSLGSKTSPEEVKRVMDEID-TDGDGY 68
+ F K D++GDG ++ D+L+ V +RS G T E ++R +D D ++ DG
Sbjct: 111 IAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRS-GEWTEDEVLRRFLDNFDSSEKDGQ 169
Query: 69 IDFKEFSTFH 78
+ EF ++
Sbjct: 170 VTLAEFQDYY 179
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYI 69
E V K+D+NG G + +E LR S+ + ++D GDG +
Sbjct: 74 EAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVV 126
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 86 GTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEE 145
G + L F D D + + A+E L KLG + + +K D +G G ++ EE
Sbjct: 35 GIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEE 94
Query: 146 FKKMM 150
F + +
Sbjct: 95 FLRAL 99
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ E+++ F D+N DG I ++LK++ SLG +E+ ++ E G ++F
Sbjct: 17 QIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTM 72
Query: 74 F-STFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKK 132
F S F TD + +++AF ++D ++ + +L+ +G+ + + K+
Sbjct: 73 FLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 132
Query: 133 VDADGDGHVNFEEFKKMM 150
+G G ++ F M+
Sbjct: 133 APVEG-GKFDYVRFVAMI 149
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
S + +R F FD+ K++ + +KD+L ++G + +E++ E +G G D+
Sbjct: 86 SEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVR 144
Query: 74 FSTFHLAGGSTDG 86
F G D
Sbjct: 145 FVAMIKGSGDDDA 157
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
Length = 624
Score = 37.0 bits (84), Expect = 0.004, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 13 GSMDEVRKV-------FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDG 65
GSMD+ +K+ K DKN D K++ ELKD L+ L + +++ E D
Sbjct: 1 GSMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQ 60
Query: 66 DGYIDFKEFSTFH 78
++ +E TF+
Sbjct: 61 TDSLEDEEIETFY 73
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 8 GANYLGSMDEVRKVFNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDE 60
G+ +M+ + VF+ K GD K+S ELK++L++ L ++ + V +VM E
Sbjct: 1 GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKE 60
Query: 61 IDTDGDGYIDFKEF 74
+D +GDG +DF+E+
Sbjct: 61 LDENGDGEVDFQEY 74
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 8 GANYLGSMDEVRKVFNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDE 60
G+ +M+ + VF+ K GD K+S ELK++L++ L ++ + V +VM E
Sbjct: 2 GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKE 61
Query: 61 IDTDGDGYIDFKEF 74
+D +GDG +DF+E+
Sbjct: 62 LDENGDGEVDFQEY 75
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 93 AFDLYDMDQNGLISANELHAVLKKL-------GEKSSLKDCVNMIKKVDADGDGHVNFEE 145
AF LYD+D++ IS +EL VL+ + + S+ D I++ D DGD ++F E
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIAD--RTIQEADQDGDSAISFTE 175
Query: 146 FKKMM 150
F K++
Sbjct: 176 FVKVL 180
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 8 GANYLGSMDEVRKVFNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDE 60
G+ +M+ + VF+ K GD K+S ELK++L++ L ++ + V +VM E
Sbjct: 1 GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKE 60
Query: 61 IDTDGDGYIDFKEF 74
+D +GDG +DF+E+
Sbjct: 61 LDENGDGEVDFQEY 74
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 8 GANYLGSMDEVRKVFNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDE 60
G+ +M+ + VF+ K GD K+S ELK++L++ L ++ + V +VM E
Sbjct: 1 GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKE 60
Query: 61 IDTDGDGYIDFKEF 74
+D +GDG +DF+E+
Sbjct: 61 LDENGDGEVDFQEY 74
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF 77
++ ++ D +GDGK++ +E+ + G + E+V + D +GDGYI +EF F
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA----DANGDGYITLEEFLEF 62
Query: 78 HL 79
L
Sbjct: 63 SL 64
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 90 LKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
LK + L D+D +G ++ E+ + KK G ++ + K DA+GDG++ EEF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLEEF 59
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTS--------PEEVKRVMDEIDTDGDGY 68
+ RK+F + + D ++SA EL ++L + ++ + + ++ +D+D G
Sbjct: 5 QFRKLFVQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGK 63
Query: 69 IDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVN 128
+ F+EF + K+ + + +D D++G I +NEL + G + + +
Sbjct: 64 LGFEEFKYLW------NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIYS 116
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
MI + +D G+++F+ F + R
Sbjct: 117 MIIRRYSDETGNMDFDNFISCLVR 140
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTS--------PEEVKRVMDEIDTDGDGY 68
+ RK+F + + D ++SA EL ++L + ++ + + ++ +D+D G
Sbjct: 16 QFRKLFVQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGK 74
Query: 69 IDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVN 128
+ F+EF + K+ + + +D D++G I +NEL + G + + +
Sbjct: 75 LGFEEFKYLW------NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIYS 127
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
MI + +D G+++F+ F + R
Sbjct: 128 MIIRRYSDETGNMDFDNFISCLVR 151
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLA 80
VF+ FDK+G G IS DE K G S E+ ++ D D G +D E + HL
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHLG 180
Query: 81 GGST 84
T
Sbjct: 181 FWYT 184
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 41/162 (25%)
Query: 21 VFNKFDKNGDGKISADEL-----KDVLRSLGSKTSPEEVKRVMDEIDT----DGDGYIDF 71
+FN D NG+GKI+ DE+ D+ LG+ +P + +R + ++ G Y
Sbjct: 28 MFNFLDINGNGKITLDEIVSKASDDICAKLGA--TPAQTQRHQEAVEAFFKKIGLDYGKE 85
Query: 72 KEFSTFHLAGGSTDGTKEL--------------------KDAFDLYDMDQNGLISANELH 111
EF F +G KEL + FD++D D +G IS +E
Sbjct: 86 VEFPAF------VNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWK 139
Query: 112 AVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMMTRS 153
G S +D K D D G ++ +E MTR
Sbjct: 140 TYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE----MTRQ 177
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D+DGDG DF+E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 74 FSTF 77
F F
Sbjct: 74 FMAF 77
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Query: 21 VFNKFD-KNGDGK-ISADELKDVLR---SLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
+F+K+ + GD +S ELK++++ ++GSK E+ R+ +++D + D ++F+E+
Sbjct: 15 IFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYV 74
Query: 76 TF 77
TF
Sbjct: 75 TF 76
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 91
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D+DGDG DF+E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 72
Query: 74 FSTF 77
F F
Sbjct: 73 FMAF 76
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTS--------PEEVKRVMDEIDTDGDGY 68
+ RK+F + + D ++SA EL ++L + ++ + + ++ +D+D G
Sbjct: 12 QFRKLFVQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGK 70
Query: 69 IDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVN 128
+ F+EF + K+ + + +D D++G I +NEL + G + + +
Sbjct: 71 LGFEEFKYLW------NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIYS 123
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
MI + +D G+++F+ F + R
Sbjct: 124 MIIRRYSDETGNMDFDNFISCLVR 147
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To
Sbi4211
Length = 89
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D+DGDG DF+E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 74 FSTF 77
F F
Sbjct: 74 FMAF 77
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D+DGDG DF+E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 74 FSTF 77
F F
Sbjct: 74 FMAF 77
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 108 NELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
NEL L+++ E+ + +++ +D+DGDG +F+EF
Sbjct: 39 NELSHFLEEIKEQEVVD---KVMETLDSDGDGECDFQEF 74
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
Length = 93
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 8 GANYLGSMDEVRKVFNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDE 60
G+ +M+ + VF+ K GD K+S +LK++L++ L ++ + V +VM E
Sbjct: 1 GSELETAMETLINVFHAHSGKEGDKYKLSKKQLKELLQTELSGFLDAQKDVDAVDKVMKE 60
Query: 61 IDTDGDGYIDFKEF 74
+D +GDG +DF+E+
Sbjct: 61 LDENGDGEVDFQEY 74
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
+ + ++ F D+N DG I D+L++ ++G E +D + + G I+F
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTV 66
Query: 74 FSTFH---LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMI 130
F T L G D + AF + D D G I + L +L ++ + ++ NM
Sbjct: 67 FLTMFGEKLKGA--DPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMW 124
Query: 131 KKVDADGDGHVNFEEFKKMMTR 152
D G+V+++ ++T
Sbjct: 125 AAFPPDVAGNVDYKNICYVITH 146
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 59 DEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANEL 110
D IDTD DGY+ EF F A G + F+ D ++NG IS +E
Sbjct: 109 DCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 54 VKRVMDEIDTDGDGYIDFKEFSTF-----HLAGGSTDGTKELKDAFDLYDMDQNGLI--- 105
+K M +D GDG+I +++ +A S + +E + F L DQ GL
Sbjct: 16 MKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEF-LRVADQLGLAPGV 74
Query: 106 -------SANELHAVLKKLGEKSSLKDCVNMIKK--VDADGDGHVNFEEFKKMM 150
+ N ++LK GE+ ++ ++I +D D DG+V+ EFK +
Sbjct: 75 RISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFL 128
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D+DGDG DF+E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 72
Query: 74 FSTF 77
F F
Sbjct: 73 FMAF 76
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 108 NELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEF 146
NEL L+++ E+ + +++ +D+DGDG +F+EF
Sbjct: 38 NELSHFLEEIKEQEVVD---KVMETLDSDGDGECDFQEF 73
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE--------EVKRVMDEI-DTDGDG 67
+ RK+F + + D ++SA EL ++L + ++ P+ + R M + D+D G
Sbjct: 16 QFRKLFVQLAGD-DMEVSATELMNILNKVVTR-HPDLKTDGFGIDTSRSMVAVMDSDTTG 73
Query: 68 YIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCV 127
+ F+EF + K+ + + +D D++G I +NEL + G + +
Sbjct: 74 KLGFEEFKYLW------NNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIY 126
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTR 152
+MI + +D G+++F+ F + R
Sbjct: 127 SMIIRRYSDETGNMDFDNFISCLVR 151
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 59 DEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANEL 110
D IDTD DGY+ EF F A G + F+ D ++NG IS +E
Sbjct: 109 DCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 61 IDTDGDGYIDFKEFSTF-----HLAGGSTDGTKELKDAFDLYDMDQNGLI---------- 105
+D GDG+I +++ +A S + +E + F L DQ GL
Sbjct: 23 VDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEF-LRVADQLGLAPGVRISVEEA 81
Query: 106 SANELHAVLKKLGEKSSLKDCVNMIKK--VDADGDGHVNFEEFKKMM 150
+ N ++LK GE+ + ++I +D D DG+V+ EFK +
Sbjct: 82 AVNATDSLLKXKGEEKAXAVIQSLIXYDCIDTDKDGYVSLPEFKAFL 128
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKT---SPEEVKRVMDEIDTDGDGYID 70
S+D+V+K F D++ G I DELK L++ + E K + + D DGDG I
Sbjct: 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIG 98
Query: 71 FKEFST 76
EF+
Sbjct: 99 VDEFAA 104
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 71 FKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKS-SLKDCVN- 128
FK F G ++ ++K AF + D D++G I +EL L+ + +L D
Sbjct: 24 FKHKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETK 83
Query: 129 -MIKKVDADGDGHVNFEEFKKMM 150
+ D DGDG + +EF M+
Sbjct: 84 AFLADGDKDGDGMIGVDEFAAMI 106
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D DGDG DF+E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQE 73
Query: 74 FSTF 77
F F
Sbjct: 74 FMAF 77
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
R+ F FD + G + EL+ L ++G + SP+ V + T+G I F ++
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDYIACC 163
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLI 105
+ + L D+F D Q G++
Sbjct: 164 VK------LRALTDSFRRRDTAQQGVV 184
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 101 QNGLISANELHAVLKKLG-----EKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
Q+G I A+EL L + G + +L+ C M+ +D D G + F EFK++
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 99
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D DGDG DF+E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQE 72
Query: 74 FSTF 77
F F
Sbjct: 73 FMAF 76
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
Length = 92
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D DGDG DF+E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQE 73
Query: 74 FSTF 77
F F
Sbjct: 74 FMAF 77
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D DGDG DF+E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQE 73
Query: 74 FSTF 77
F F
Sbjct: 74 FMAF 77
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D DGDG DF+E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQE 72
Query: 74 FSTF 77
F F
Sbjct: 73 FMAF 76
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Query: 14 SMDEVRKVFNKFDKNGDGK--------ISADELKDVLRSLGSKTSPEEVKRVMDEIDTDG 65
S +E++ +F K+DK GDG+ + E +L+ + + + + +E+D +G
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNG 56
Query: 66 DGYIDFKEFSTF 77
DG + F+EF
Sbjct: 57 DGEVSFEEFQVL 68
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 14/74 (18%)
Query: 87 TKELKDAFDLYDMDQNG--------LISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD 138
+ELK F+ YD + +G L+ E ++LK + S+L + + +++D +GD
Sbjct: 4 PEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGM---STLDE---LFEELDKNGD 57
Query: 139 GHVNFEEFKKMMTR 152
G V+FEEF+ ++ +
Sbjct: 58 GEVSFEEFQVLVKK 71
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 9 ANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSL 45
+ L M + ++F + DKNGDG++S +E + +++ +
Sbjct: 36 PSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKI 72
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 21 VFNKFD-KNGD-GKISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKE 73
VF+++ + GD K+ ELK+++ + L E V +VM+ +D++GDG DF+E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQE 73
Query: 74 FSTF 77
F F
Sbjct: 74 FMAF 77
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL-GEKSSLKD--CVNMIKKV 133
F G ++ ++K AF + D D++G I +EL L+ + +L D +K
Sbjct: 31 FAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAG 90
Query: 134 DADGDGHVNFEEFKKMM 150
D+DGDG + +EF ++
Sbjct: 91 DSDGDGKIGVDEFTALV 107
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSL---GSKTSPEEVKRVMDEIDTDGDGYID 70
S D+V+K F D++ G I DELK L++ + E K + D+DGDG I
Sbjct: 40 SADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 99
Query: 71 FKEFST 76
EF+
Sbjct: 100 VDEFTA 105
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 79 LAGGSTDGTKELKD--AFDLYDMDQNGLISANELHAVLKKL---GE-----KSSLKDCV- 127
L+ S T ++K AF ++D D +G ++ +L ++ L GE S +K +
Sbjct: 87 LSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLID 146
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTRS 153
N++++ D D DG +N EF+ +++RS
Sbjct: 147 NILEESDIDRDGTINLSEFQHVISRS 172
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 22 FNKFDKNGDGKISADELKDVLRSLG-----SKTSPEEVKRVMDEI----DTDGDGYIDFK 72
F FD + DG ++ ++L ++ L ++ S E+K+++D I D D DG I+
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 73 EFSTFHLAGGSTDGTKELK 91
EF H+ S D K
Sbjct: 164 EFQ--HVISRSPDFASSFK 180
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 79 LAGGSTDGTKELKD--AFDLYDMDQNGLISANELHAVLKKL---GE-----KSSLKDCV- 127
L+ S T ++K AF ++D D +G ++ +L ++ L GE S +K +
Sbjct: 118 LSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLID 177
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTRS 153
N++++ D D DG +N EF+ +++RS
Sbjct: 178 NILEESDIDRDGTINLSEFQHVISRS 203
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 22 FNKFDKNGDGKISADELKDVLRSLG-----SKTSPEEVKRVMDEI----DTDGDGYIDFK 72
F FD + DG ++ ++L ++ L ++ S E+K+++D I D D DG I+
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 73 EFSTFHLAGGSTDGTKELK 91
EF H+ S D K
Sbjct: 195 EFQ--HVISRSPDFASSFK 211
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
Length = 622
Score = 33.9 bits (76), Expect = 0.042, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF 77
+ K DKN D K++ ELKD L+ L + +++ E D ++ +E TF
Sbjct: 11 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETF 70
Query: 78 H 78
+
Sbjct: 71 Y 71
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 21/119 (17%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSLGSKTSP------EEVKRVMDEI----DTDGDGYI 69
+++ FD + +G I EL D R K P E V+++ D DG +
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRL 74
Query: 70 DFKEFSTFHLAG-----------GSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL 117
+E + L D + E + YD D +G ISA EL LK L
Sbjct: 75 QIEELANXILPQEENFLLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDL 133
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 20/119 (16%)
Query: 17 EVRKVFNKFDKNGDGKISADELKDVLRSL----GSKTSPEEVKRVMDE----IDTDGDGY 68
E K++ K+D + G ISA ELK+ L+ L K P ++ D D + DG
Sbjct: 105 EFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGR 164
Query: 69 IDFKEFS-------TFHL-----AGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLK 115
+D + + F L A + ++ + F YD+ + G + E+ +K
Sbjct: 165 LDLNDLARILALQENFLLQFKXDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVK 223
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 74 FSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLK--KLGEKSSLKDCVN--M 129
F+ L+G S D ++K AF D D++G I +EL L+ K G ++ L D
Sbjct: 31 FAKCGLSGKSAD---DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARA-LTDAETKAF 86
Query: 130 IKKVDADGDGHVNFEEFKKMM 150
+K D+DGDG + EE+ ++
Sbjct: 87 LKAGDSDGDGAIGVEEWVALV 107
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELK---DVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
S D+++K F D++ G I DELK V ++ + E K + D+DGDG I
Sbjct: 40 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 71 FKEF 74
+E+
Sbjct: 100 VEEW 103
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 74 FSTFHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLK--KLGEKSSLKDCVN--M 129
F+ L+G S D ++K AF D D++G I +EL L+ K G ++ L D
Sbjct: 30 FAKCGLSGKSAD---DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARA-LTDAETKAF 85
Query: 130 IKKVDADGDGHVNFEEFKKMM 150
+K D+DGDG + EE+ ++
Sbjct: 86 LKAGDSDGDGAIGVEEWVALV 106
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELK---DVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
S D+++K F D++ G I DELK V ++ + E K + D+DGDG I
Sbjct: 39 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 98
Query: 71 FKEF 74
+E+
Sbjct: 99 VEEW 102
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMD 59
+ +F FDK G G I+ D L D LR++G + + V+ +++
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN 47
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 33.1 bits (74), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLG 46
S +E+ F FDKN DG I +EL ++LR+ G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
R+ F FD + G + EL+ L ++G + +P+ V + T G I F ++
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGK--ITFDDYIACC 132
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLI 105
+ + L D+F D Q G++
Sbjct: 133 VK------LRALTDSFRRRDSAQQGMV 153
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 101 QNGLISANELHAVLKKLG-----EKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
Q+G I A+EL L + G + +L+ C M+ +D D G + F EFK++
Sbjct: 14 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 68
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLR--SLGSKT-SPEEVKRVMDEIDTDGDGYID 70
S D+++K F D++ G I DELK L+ S G++ + E K + D+DGDG I
Sbjct: 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 71 FKEFST 76
E++
Sbjct: 100 VDEWAA 105
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKS-SLKDCVN--MIKKV 133
F G + ++K AF + D D++G I +EL L+ + +L D +K
Sbjct: 31 FAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAG 90
Query: 134 DADGDGHVNFEEFKKMM 150
D+DGDG + +E+ ++
Sbjct: 91 DSDGDGAIGVDEWAALV 107
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 17 EVRKVFNKFDKNGDGKISADELK------DVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
E+ F K D NGDG ++A EL+ D ++L E +++ D + DG I
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 71 FKEF 74
+EF
Sbjct: 68 KEEF 71
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSL-KDCVN-----MIKKVDADGDGHVN 142
EL+ AF D + +G ++A EL + L +L KD V +IK D + DG ++
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 143 FEEF 146
EEF
Sbjct: 68 KEEF 71
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 32.7 bits (73), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFH 78
R+ F D + G + EL+ L ++G + SP+ V + T+G I F ++
Sbjct: 106 RQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDYIACC 163
Query: 79 LAGGSTDGTKELKDAFDLYDMDQNGLI 105
+ + L D+F D Q G++
Sbjct: 164 VK------LRALTDSFRRRDTAQQGVV 184
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 101 QNGLISANELHAVLKKLG-----EKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
Q+G I A+EL L + G + +L+ C M+ +D D G + F EFK++
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELW 99
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL-GEKSSLKD--CVNMIKKV 133
F G ++ ++K AF + D D++G I +EL L+ + +L D +K
Sbjct: 30 FAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAG 89
Query: 134 DADGDGHVNFEEFKKMM 150
D+DGDG + +E+ ++
Sbjct: 90 DSDGDGKIGVDEWTALV 106
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSL---GSKTSPEEVKRVMDEIDTDGDGYID 70
S D+V+K F D++ G I DELK L++ + E K + D+DGDG I
Sbjct: 39 SADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 98
Query: 71 FKEFST 76
E++
Sbjct: 99 VDEWTA 104
>pdb|4DUQ|A Chain A, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
pdb|4DUQ|B Chain B, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
Length = 98
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 22 FNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
F+K+ + GD K+S E+K++L +G K E +K++M +D + D +DF+E+
Sbjct: 17 FHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEY 76
Query: 75 STF 77
+ F
Sbjct: 77 AVF 79
>pdb|2RGI|A Chain A, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A
Resolution
pdb|2RGI|B Chain B, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A
Resolution
Length = 98
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 22 FNKFD-KNGDG-KISADELKDVLRS-----LGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
F+K+ + GD K+S E+K++L +G K E +K++M +D + D +DF+E+
Sbjct: 17 FHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEY 76
Query: 75 STF 77
+ F
Sbjct: 77 AVF 79
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 35/145 (24%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
D ++++ +F +GD A L + DT G + F++F
Sbjct: 36 DTFKQIYAQFFPHGDASTYAHYL-------------------FNAFDTTQTGSVKFEDFV 76
Query: 76 TFH--LAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKK------------LGEKS 121
T L G+ ++L+ F+LYD++++G I+ E+ ++K L E +
Sbjct: 77 TALSILLRGTVH--EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDT 134
Query: 122 SLKDCVNMIKKVDADGDGHVNFEEF 146
+ +K+D + DG V +EF
Sbjct: 135 PRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 6 SNGANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDG 65
SN + ++ + + +FD NG+G I LK +L LG + E+KR++ E+ +
Sbjct: 38 SNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGS 97
Query: 66 DGYIDFKEFSTFHLAGGST 84
+ + +F L S
Sbjct: 98 EETFSYSDFLRMMLGKRSA 116
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 97 YDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
+D++ NG I L +L+KLG + + +I++V + + ++ +F +MM
Sbjct: 57 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMM 110
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 14 SMDEVRKVFNKFD-KNGDG-KISADELKDVLRSLGSKT--SPEEVKRVMDEIDTDGDGYI 69
S E++ +F K+ K GD ++S +ELK ++++ P + + E+D +GDG +
Sbjct: 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEV 64
Query: 70 DFKEFSTF 77
F+EF
Sbjct: 65 SFEEFQVL 72
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 89 ELKDAFDLY---DMDQNGLISANELHAVLKKLGEKSSL----KDCVNMIKKVDADGDGHV 141
ELK F+ Y + D N L S EL +++ E SL + ++ +++D +GDG V
Sbjct: 8 ELKSIFEKYAAKEGDPNQL-SKEELKQLIQ--AEFPSLLKGPRTLDDLFQELDKNGDGEV 64
Query: 142 NFEEFKKMMTR 152
+FEEF+ ++ +
Sbjct: 65 SFEEFQVLVKK 75
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGS 47
+F + DKNGDG++S +E + +++ +
Sbjct: 52 LFQELDKNGDGEVSFEEFQVLVKKISQ 78
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 5 NSNGANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSL 45
+ G + L M + ++F + DKNGDG++S +E + +++ +
Sbjct: 33 QTEGPSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKI 73
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 89 ELKDAFDLYDMDQNGLISANELHAVLKKLG-EKSSLKDCVNMIKKVDADGDGHVNFEEFK 147
EL F L + LI+A L LG E S +D M+++ D DGDG +N EF
Sbjct: 41 ELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFC 100
Query: 148 KMMTR 152
+M R
Sbjct: 101 VLMVR 105
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 12/65 (18%)
Query: 22 FNKFDKNGDGKISADELKDVLRSL----GSKTSP--------EEVKRVMDEIDTDGDGYI 69
FN +D N DG I+ +E+ D+++++ G T P + V+ ++D + DG +
Sbjct: 144 FNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVV 203
Query: 70 DFKEF 74
EF
Sbjct: 204 TIDEF 208
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYI 69
+FN FD + +G +S ++ L L T E++ + D + DGYI
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYI 155
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 15 MDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
++E+ K+F FD N G ++ ++K++L + G + +E ++ ++ + ID+K F
Sbjct: 83 VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSEDN--IDYKLF 140
Query: 75 S 75
Sbjct: 141 C 141
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 9/130 (6%)
Query: 18 VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF 77
+R++F +G GK S +LK VL +K++ ++ D G + S
Sbjct: 124 LRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRM-----SYI 178
Query: 78 HLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKLG-EKSSLKDCVNMIKKVDAD 136
L + D + D F D + NG +S E +LG +K S++D + + D D
Sbjct: 179 TLVAVANDLAALVAD-FRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDA--LFRYADED 235
Query: 137 GDGHVNFEEF 146
V F E+
Sbjct: 236 ESDDVGFSEY 245
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 105 ISANELHAVLKKLGEKSS--------LKDCVNMIKKVDADGDGHVNFEEFKKMM 150
+SA EL +L K+ + + C +M+ +D+D G + FEEFK +
Sbjct: 31 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 84
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 105 ISANELHAVLKKLGEKSS--------LKDCVNMIKKVDADGDGHVNFEEFKKMM 150
+SA EL +L K+ + + C +M+ +D+D G + FEEFK +
Sbjct: 20 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 73
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 51 PEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGG 82
P + R+M ++D D DG +DF+EF +L GG
Sbjct: 55 PGVLDRMMKKLDLDSDGQLDFQEF--LNLIGG 84
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 129 MIKKVDADGDGHVNFEEFKKMM 150
M+KK+D D DG ++F+EF ++
Sbjct: 61 MMKKLDLDSDGQLDFQEFLNLI 82
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 30.0 bits (66), Expect = 0.55, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 105 ISANELHAVLKKLGEKS--------SLKDCVNMIKKVDADGDGHVNFEEFKKMMTR 152
IS EL +L ++ K SL+ C +M+ +D DG+G + EF + R
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR 605
Score = 28.9 bits (63), Expect = 1.3, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query: 105 ISANELHAVLKKLGEKS--------SLKDCVNMIKKVDADGDGHVNFEEFKKM 149
+SA EL +L K+ + + C +M+ +D+D G + FEEFK +
Sbjct: 747 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 799
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 77 FHLAGGSTDGTKELKDAFDLYDMDQNGLISANELHAVLKKL-GEKSSLKD--CVNMIKKV 133
F G ++ ++K AF + D++G I +EL L+ + +L D +K
Sbjct: 30 FAKVGLTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAG 89
Query: 134 DADGDGHVNFEEFKKMM 150
D+DGDG + +E+ ++
Sbjct: 90 DSDGDGKIGVDEWTALV 106
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSL---GSKTSPEEVKRVMDEIDTDGDGYID 70
S D+V+K F ++ G I DELK L++ + E K + D+DGDG I
Sbjct: 39 SADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIG 98
Query: 71 FKEFST 76
E++
Sbjct: 99 VDEWTA 104
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/59 (18%), Positives = 29/59 (49%)
Query: 12 LGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
+++ ++ F D++G G + EL+ + +G + SP+ + ++ +G + D
Sbjct: 66 WAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFD 124
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 101 QNGLISANELHAVLKKLG-----EKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
Q+G + A EL L + G SL+ C MI +D D G + F FK++
Sbjct: 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELW 66
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/59 (18%), Positives = 29/59 (49%)
Query: 12 LGSMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
+++ ++ F D++G G + EL+ + +G + SP+ + ++ +G + D
Sbjct: 66 WAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFD 124
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 101 QNGLISANELHAVLKKLG-----EKSSLKDCVNMIKKVDADGDGHVNFEEFKKMM 150
Q+G + A EL L + G SL+ C MI +D D G + F FK++
Sbjct: 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELW 66
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 16 DEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDE 60
DE K+F+ FD+N + + D+L LG + E + +M E
Sbjct: 14 DECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKE 58
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 22 FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDG----YIDF 71
+ +FD NG+G I LK +L LG + E+K+++ E+ + G G Y DF
Sbjct: 38 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEV-SSGSGETFSYPDF 90
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 16/74 (21%)
Query: 14 SMDEVRKVFNKF-DKNGDG---------KISADELKDVLRSLGSKTSPEEVKRVMDEIDT 63
S +E++ +F K+ DK GDG + E +L+ + + + + +E+D
Sbjct: 3 SPEELKGIFEKYADKEGDGNQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDK 56
Query: 64 DGDGYIDFKEFSTF 77
+GDG + F+EF
Sbjct: 57 NGDGEVSFEEFQVL 70
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 9 ANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSL 45
+ L M + ++F + DKNGDG++S +E + +++ +
Sbjct: 38 PSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKI 74
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 22 FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDG----YIDF 71
+ +FD NG+G I LK +L LG + E+K+++ E+ + G G Y DF
Sbjct: 57 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEV-SSGSGETFSYPDF 109
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 9 ANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSL 45
+ L M + ++F + DKNGDG++S +E + +++ +
Sbjct: 37 PSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKI 73
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 9 ANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSL 45
+ L M + ++F + DKNGDG++S +E + +++ +
Sbjct: 41 PSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKI 77
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 53 LFEELDKNGDGEVSFEEFQVLVKK 76
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 9 ANYLGSMDEVRKVFNKFDKNGDGKISADELKDVLRSL 45
+ L M + ++F + DKNGDG++S +E + +++ +
Sbjct: 38 PSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKI 74
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
+FN FD G + ++ L L T E+++ + D + DGYI+
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYIN 107
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF-----S 75
+FN FD G + ++ L L T E+++ + D + DGYI+ +E +
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153
Query: 76 TFHLAGGST------DGTKELKDAFDLYDMDQN--GLISANEL 110
+ + G T D ++ D F MD+N G+++ +E
Sbjct: 154 IYDMMGKYTYPVLKEDTPRQHVDVF-FQKMDKNKDGIVTLDEF 195
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 20/82 (24%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAV----LKKLGEKSSLKDCVNMIKK------- 132
T+ K L D+Y + LI N HAV LKKL E +C I+K
Sbjct: 3 TELEKALNSIIDVYH--KYSLIKGN-FHAVYRDDLKKLLET----ECPQYIRKKGADVWF 55
Query: 133 --VDADGDGHVNFEEFKKMMTR 152
+D + DG VNF+EF ++ +
Sbjct: 56 KELDINTDGAVNFQEFLILVIK 77
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 51 PEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGG 82
P + R+M ++D + DG +DF+EF +L GG
Sbjct: 53 PGVLDRMMKKLDLNSDGQLDFQEF--LNLIGG 82
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 129 MIKKVDADGDGHVNFEEFKKMM 150
M+KK+D + DG ++F+EF ++
Sbjct: 59 MMKKLDLNSDGQLDFQEFLNLI 80
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 22 FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAG 81
+ +FD N +G+I LK ++ LG + E+K+++ E+ I +++F L
Sbjct: 56 YMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115
Query: 82 GST 84
S
Sbjct: 116 RSA 118
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 22 FNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAG 81
+ +FD N +G+I LK ++ LG + E+K+++ E+ I +++F L
Sbjct: 56 YMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115
Query: 82 GST 84
S
Sbjct: 116 RSA 118
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 19 RKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEF 74
R++FN DK G ++ + + +L + S ++ + + D D DG + +EF
Sbjct: 17 RQLFNSHDKTMSGHLTGPQARTIL--MQSSLPQAQLASIWNLSDIDQDGKLTAEEF 70
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 21 VFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYID 70
+FN FD G + ++ L L T E+++ + D + DGYI+
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYIN 110
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSL---GSKTSPEEVKRVMDEIDTDGDGYI 69
S D+V+K F ++ G I DELK L++ + E K + D+DGDG I
Sbjct: 39 SADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKI 97
>pdb|1VR5|A Chain A, Crystal Structure Of Oligopeptide Abc Transporter,
Periplasmic Oligopeptide-Binding (Tm1223) From
Thermotoga Maritima At 1.73 A Resolution
pdb|1VR5|B Chain B, Crystal Structure Of Oligopeptide Abc Transporter,
Periplasmic Oligopeptide-Binding (Tm1223) From
Thermotoga Maritima At 1.73 A Resolution
Length = 547
Score = 27.7 bits (60), Expect = 2.6, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 39 KDVLRSLGSKTSPEEVKRVMDEI---DTDGDGY 68
K+V+ G K PE K+++DE+ D + DG+
Sbjct: 326 KEVVDKYGFKYDPEXAKKILDELGFKDVNKDGF 358
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 84 TDGTKELKDAFDLYDMDQNGLISANELHAV----LKKLGEKSSLKDCVN-----MIKKVD 134
T+ K L D+Y + LI N HAV LKKL E S + K++D
Sbjct: 3 TELEKALNSIIDVYH--KYSLIKGN-FHAVYRDDLKKLLETESPQYIRKKGADVWFKELD 59
Query: 135 ADGDGHVNFEEFKKMMTR 152
+ DG VNF+EF ++ +
Sbjct: 60 INTDGAVNFQEFLILVIK 77
>pdb|3NSL|A Chain A, Crystal Structure Of S100a3 C30a+c68a Double Mutant
Expressed In Insect Cell
pdb|3NSL|F Chain F, Crystal Structure Of S100a3 C30a+c68a Double Mutant
Expressed In Insect Cell
pdb|3NSL|C Chain C, Crystal Structure Of S100a3 C30a+c68a Double Mutant
Expressed In Insect Cell
pdb|3NSL|B Chain B, Crystal Structure Of S100a3 C30a+c68a Double Mutant
Expressed In Insect Cell
pdb|3NSL|E Chain E, Crystal Structure Of S100a3 C30a+c68a Double Mutant
Expressed In Insect Cell
pdb|3NSL|D Chain D, Crystal Structure Of S100a3 C30a+c68a Double Mutant
Expressed In Insect Cell
Length = 101
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 27 KNGDG-KISADELKDVLRSLGSKTSPEEVK-----RVMDEIDTDGDGYIDFKEF 74
+ GD K++ ELK++L+ + +P E + + M +DT+ D +DF E+
Sbjct: 22 RCGDKYKLAQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDAEVDFVEY 75
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 26/98 (26%)
Query: 48 KTSPEEVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKD-AFDLYDMDQNGLIS 106
SPE VK +++E+ DG + S +++L++ A +LY D + +I
Sbjct: 39 PPSPEVVKAILEELGPDGAALRIYPSAS-----------SQKLREVAGELYGFDPSWIIX 87
Query: 107 ANELHAVLKKLGEKSSLKDCVNMIKKVDADGD--GHVN 142
AN VL N+I+ A+G+ G+V+
Sbjct: 88 ANGSDEVLN------------NLIRAFAAEGEEIGYVH 113
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLVKK 72
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 20/26 (76%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSL 45
++F + DKNGDG++S +E + +++ +
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLVKK 72
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 20/26 (76%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSL 45
++F + DKNGDG++S +E + +++ +
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLVKK 73
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 20/26 (76%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSL 45
++F + DKNGDG++S +E + +++ +
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
+G +S D++K VL L SK + + RV + D D DG +D EF+
Sbjct: 28 NGFLSGDKVKPVL--LNSKLPVDILGRVWELSDIDHDGMLDRDEFAV 72
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 19/24 (79%)
Query: 129 MIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D +GDG V+FEEF+ ++ +
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLVKK 73
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 20/26 (76%)
Query: 20 KVFNKFDKNGDGKISADELKDVLRSL 45
++F + DKNGDG++S +E + +++ +
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
+G +S D++K VL L SK + + RV + D D DG +D EF+
Sbjct: 28 NGFLSGDKVKPVL--LNSKLPVDILGRVWELSDIDHDGMLDRDEFAV 72
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
+G +S D++K VL L SK + + RV + D D DG +D EF+
Sbjct: 23 NGFLSGDKVKPVL--LNSKLPVDILGRVWELSDIDHDGMLDRDEFAV 67
>pdb|2ZQM|A Chain A, Crystal Structure Of The Prefoldin Beta Subunit From
Thermococcus Strain Ks-1
Length = 117
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 53 EVKRVMDEIDTDGDGYIDFKEFSTFHLAGGSTDGTKELKDAFDLYDMDQNGL 104
E K+ +DEI++ D + +K T + ELK+ + ++ N L
Sbjct: 38 EAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKIETLEVRLNAL 89
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 30 DGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFST 76
+G +S D++K VL L SK + + RV + D D DG +D EF+
Sbjct: 23 NGFLSGDKVKPVL--LNSKLPVDILGRVWELSDIDHDGMLDRDEFAV 67
>pdb|1ZL6|A Chain A, Crystal Structure Of Tyr350ala Mutant Of Clostridium
Botulinum Neurotoxin E Catalytic Domain
pdb|1ZL6|B Chain B, Crystal Structure Of Tyr350ala Mutant Of Clostridium
Botulinum Neurotoxin E Catalytic Domain
Length = 420
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 9 ANYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 70 PNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 120
>pdb|1ZN3|A Chain A, Crystal Structure Of Glu335ala Mutant Of Clostridium
Botulinum Neurotoxin Type E
pdb|1ZN3|B Chain B, Crystal Structure Of Glu335ala Mutant Of Clostridium
Botulinum Neurotoxin Type E
Length = 420
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 9 ANYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 70 PNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 120
>pdb|1ZKW|A Chain A, Crystal Structure Of Arg347ala Mutant Of Botulinum
Neurotoxin E Catalytic Domain
pdb|1ZKW|B Chain B, Crystal Structure Of Arg347ala Mutant Of Botulinum
Neurotoxin E Catalytic Domain
Length = 420
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 9 ANYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 70 PNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 120
>pdb|1T3A|A Chain A, Crystal Structure Of Clostridium Botulinum Neurotoxin Type
E Catalytic Domain
pdb|1T3A|B Chain B, Crystal Structure Of Clostridium Botulinum Neurotoxin Type
E Catalytic Domain
Length = 421
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 9 ANYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 70 PNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 120
>pdb|3D3X|A Chain A, Crystal Structure Of Botulinum Neurotoxin Serotype E
Catalytic Domain In Complex With Snap-25 Substrate
Peptide
pdb|3D3X|B Chain B, Crystal Structure Of Botulinum Neurotoxin Serotype E
Catalytic Domain In Complex With Snap-25 Substrate
Peptide
Length = 427
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 9 ANYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 70 PNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 120
>pdb|1ZL5|A Chain A, Crystal Structure Of Glu335gln Mutant Of Clostridium
Botulinum Neurotoxin E Catalytic Domain
pdb|1ZL5|B Chain B, Crystal Structure Of Glu335gln Mutant Of Clostridium
Botulinum Neurotoxin E Catalytic Domain
Length = 420
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 9 ANYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 70 PNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 120
>pdb|1ZKX|A Chain A, Crystal Structure Of Glu158alaTHR159ALAASN160ALA- A Triple
Mutant Of Clostridium Botulinum Neurotoxin E Catalytic
Domain
pdb|1ZKX|B Chain B, Crystal Structure Of Glu158alaTHR159ALAASN160ALA- A Triple
Mutant Of Clostridium Botulinum Neurotoxin E Catalytic
Domain
Length = 420
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 9 ANYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 70 PNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 120
>pdb|1T3C|A Chain A, Clostridium Botulinum Type E Catalytic Domain E212q Mutant
pdb|1T3C|B Chain B, Clostridium Botulinum Type E Catalytic Domain E212q Mutant
Length = 421
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 9 ANYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 70 PNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 120
>pdb|3D37|A Chain A, The Crystal Structure Of The Tail Protein From Neisseria
Meningitidis Mc58
pdb|3D37|B Chain B, The Crystal Structure Of The Tail Protein From Neisseria
Meningitidis Mc58
Length = 381
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 94 FDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADG 137
++ YD+D + LI A+ V+ +LG ++++ D +V DG
Sbjct: 22 WERYDIDSDFLIPADSFDFVIGRLGPEAAIPDLSGESCEVVIDG 65
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
Length = 95
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 124 KDCVN-MIKKVDADGDGHVNFEEF 146
KD V+ ++K +DA+GD V+F EF
Sbjct: 51 KDAVDKLLKDLDANGDAQVDFSEF 74
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 54 VKRVMDEIDTDGDGYIDFKEFSTFHLA 80
V +++ ++D +GD +DF EF F A
Sbjct: 54 VDKLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|1UX7|A Chain A, Carbohydrate-binding Module Cbm36 In Complex With Calcium
And Xylotriose
Length = 120
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 42 LRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
L ++ T +E+K + D D Y+DF EFS
Sbjct: 86 LSNITHATGDQEIKLALTSDDGTWDAYVDFIEFS 119
>pdb|3EJ6|A Chain A, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|B Chain B, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|C Chain C, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|D Chain D, Neurospora Crassa Catalase-3 Crystal Structure
Length = 688
Score = 26.2 bits (56), Expect = 7.0, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 4 NNSNGANYLGSMDEVRKVFNKFDKNGDGKISADELKDV 41
+N A++LG+ D+ VF +F + SAD +DV
Sbjct: 88 SNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDV 125
>pdb|1W0N|A Chain A, Structure Of Uncomplexed Carbohydrate Binding Domain Cbm36
Length = 131
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 42 LRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
L ++ T +E+K + D D Y+DF EFS
Sbjct: 97 LSNITHATGDQEIKLALTSDDGTWDAYVDFIEFS 130
>pdb|2CCM|A Chain A, X-Ray Structure Of Calexcitin From Loligo Pealeii At 1.8a
pdb|2CCM|B Chain B, X-Ray Structure Of Calexcitin From Loligo Pealeii At 1.8a
Length = 191
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 26 DKNGDGKISADEL----KDVLRSLGSKTS-PEEVKRVMDEI----DTDGDGYIDFKEFST 76
D+N D +++ +E + ++S+ S PE + + M+ + DT GD ID E+ST
Sbjct: 74 DENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYST 133
Query: 77 FHLAGG 82
+++ G
Sbjct: 134 VYMSYG 139
>pdb|2QPT|A Chain A, Crystal Structure Of An Ehd Atpase Involved In Membrane
Remodelling
Length = 550
Score = 26.2 bits (56), Expect = 7.7, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 29 GDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFS 75
DGK+S + K + +G+K + R+ D D DG +D +EF+
Sbjct: 470 ADGKLSGSKAKTWM--VGTKLPNSVLGRIWKLSDVDRDGMLDDEEFA 514
>pdb|1KSF|X Chain X, Crystal Structure Of Clpa, An Hsp100 Chaperone And
Regulator Of Clpap Protease: Structural Basis Of
Differences In Function Of The Two Aaa+ Atpase Domains
pdb|1R6B|X Chain X, High Resolution Crystal Structure Of Clpa
Length = 758
Score = 26.2 bits (56), Expect = 7.9, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 85 DGTKELKDAFDLYDMDQNGLISANELHAVLKKLGEKSSLKDCVNMIKKVDADGD----GH 140
D K K + D N ++ +E+H ++ D N+IK + + G G
Sbjct: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGS 321
Query: 141 VNFEEFKKMMTR 152
++EF + +
Sbjct: 322 TTYQEFSNIFEK 333
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 124 KDCVNMIKKVDADGDGHVNFEEFKKMM 150
+D +++K D + DG ++F+EF KMM
Sbjct: 5 EDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 128 NMIKKVDADGDGHVNFEEFKKMMTR 152
+ +++D GDG V+FEEF+ ++ +
Sbjct: 48 ELFEELDKAGDGEVSFEEFQVLVKK 72
>pdb|1R7R|A Chain A, The Crystal Structure Of Murine P97VCP AT 3.6A
Length = 816
Score = 26.2 bits (56), Expect = 8.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDG 67
S +RK F + +KN I DEL D + KT E +R++ ++ T DG
Sbjct: 282 SESNLRKAFEEAEKNAPAIIFIDEL-DAIAPKREKTHGEVERRIVSQLLTLMDG 334
>pdb|3CF1|A Chain A, Structure Of P97VCP IN COMPLEX WITH ADPADP.ALFX
pdb|3CF1|B Chain B, Structure Of P97VCP IN COMPLEX WITH ADPADP.ALFX
pdb|3CF1|C Chain C, Structure Of P97VCP IN COMPLEX WITH ADPADP.ALFX
pdb|3CF2|A Chain A, Structure Of P97VCP IN COMPLEX WITH ADPAMP-Pnp
pdb|3CF2|B Chain B, Structure Of P97VCP IN COMPLEX WITH ADPAMP-Pnp
pdb|3CF2|C Chain C, Structure Of P97VCP IN COMPLEX WITH ADPAMP-Pnp
pdb|3CF2|D Chain D, Structure Of P97VCP IN COMPLEX WITH ADPAMP-Pnp
pdb|3CF3|A Chain A, Structure Of P97VCP IN COMPLEX WITH ADP
pdb|3CF3|B Chain B, Structure Of P97VCP IN COMPLEX WITH ADP
pdb|3CF3|C Chain C, Structure Of P97VCP IN COMPLEX WITH ADP
Length = 806
Score = 26.2 bits (56), Expect = 8.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDG 67
S +RK F + +KN I DEL D + KT E +R++ ++ T DG
Sbjct: 282 SESNLRKAFEEAEKNAPAIIFIDEL-DAIAPKREKTHGEVERRIVSQLLTLMDG 334
>pdb|3HU3|A Chain A, Structure Of P97 N-D1 R155h Mutant In Complex With Atpgs
pdb|3HU3|B Chain B, Structure Of P97 N-D1 R155h Mutant In Complex With Atpgs
Length = 489
Score = 26.2 bits (56), Expect = 8.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDG 67
S +RK F + +KN I DEL D + KT E +R++ ++ T DG
Sbjct: 282 SESNLRKAFEEAEKNAPAIIFIDEL-DAIAPKREKTHGEVERRIVSQLLTLMDG 334
>pdb|3HU2|A Chain A, Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs
pdb|3HU2|B Chain B, Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs
pdb|3HU2|C Chain C, Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs
pdb|3HU2|D Chain D, Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs
pdb|3HU2|E Chain E, Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs
pdb|3HU2|F Chain F, Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs
Length = 489
Score = 26.2 bits (56), Expect = 8.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDG 67
S +RK F + +KN I DEL D + KT E +R++ ++ T DG
Sbjct: 282 SESNLRKAFEEAEKNAPAIIFIDEL-DAIAPKREKTHGEVERRIVSQLLTLMDG 334
>pdb|3HU1|A Chain A, Structure Of P97 N-D1 R95g Mutant In Complex With Atpgs
pdb|3HU1|B Chain B, Structure Of P97 N-D1 R95g Mutant In Complex With Atpgs
pdb|3HU1|C Chain C, Structure Of P97 N-D1 R95g Mutant In Complex With Atpgs
pdb|3HU1|D Chain D, Structure Of P97 N-D1 R95g Mutant In Complex With Atpgs
pdb|3HU1|E Chain E, Structure Of P97 N-D1 R95g Mutant In Complex With Atpgs
pdb|3HU1|F Chain F, Structure Of P97 N-D1 R95g Mutant In Complex With Atpgs
Length = 489
Score = 26.2 bits (56), Expect = 8.8, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 14 SMDEVRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPEEVKRVMDEIDTDGDG 67
S +RK F + +KN I DEL D + KT E +R++ ++ T DG
Sbjct: 282 SESNLRKAFEEAEKNAPAIIFIDEL-DAIAPKREKTHGEVERRIVSQLLTLMDG 334
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p Determined
At 2.0a Resolution By X-Ray
Length = 95
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 124 KDCVN-MIKKVDADGDGHVNFEEF 146
KD V+ ++K +DA+GD V+F EF
Sbjct: 51 KDAVDKLLKDLDANGDAQVDFSEF 74
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 54 VKRVMDEIDTDGDGYIDFKEFSTFHLA 80
V +++ ++D +GD +DF EF F A
Sbjct: 54 VDKLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|3FFZ|A Chain A, Domain Organization In Clostridium Butulinum Neurotoxin
Type E Is Unique: Its Implication In Faster
Translocation
pdb|3FFZ|B Chain B, Domain Organization In Clostridium Butulinum Neurotoxin
Type E Is Unique: Its Implication In Faster
Translocation
Length = 1252
Score = 25.8 bits (55), Expect = 9.1, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 10 NYLGSMDE-------VRKVFNKFDKNGDGKISADELKDVLRSLGSKTSPE 52
NYL S +E V K+FN+ + N G I +EL LG+ +P+
Sbjct: 72 NYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPD 121
>pdb|1HWU|A Chain A, Structure Of Pii Protein From Herbaspirillum Seropedicae
pdb|1HWU|B Chain B, Structure Of Pii Protein From Herbaspirillum Seropedicae
pdb|1HWU|C Chain C, Structure Of Pii Protein From Herbaspirillum Seropedicae
pdb|1HWU|D Chain D, Structure Of Pii Protein From Herbaspirillum Seropedicae
pdb|1HWU|E Chain E, Structure Of Pii Protein From Herbaspirillum Seropedicae
pdb|1HWU|F Chain F, Structure Of Pii Protein From Herbaspirillum Seropedicae
Length = 112
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 27 KNGDGKISADELKDVLRSLGSKTSPEEV 54
K GDGKI E++ V+R +T P+ V
Sbjct: 85 KIGDGKIFVQEVEQVIRIRTGETGPDAV 112
>pdb|2KAX|A Chain A, Solution Structure And Dynamics Of S100a5 In The Apo And
Ca2+ -Bound States
pdb|2KAX|B Chain B, Solution Structure And Dynamics Of S100a5 In The Apo And
Ca2+ -Bound States
pdb|2KAY|A Chain A, Solution Structure And Dynamics Of S100a5 In The Ca2+
-Bound States
pdb|2KAY|B Chain B, Solution Structure And Dynamics Of S100a5 In The Ca2+
-Bound States
pdb|4DIR|A Chain A, 2.6 Angstrom X-ray Structure Of Human Ca(2+)-s100a5
pdb|4DIR|B Chain B, 2.6 Angstrom X-ray Structure Of Human Ca(2+)-s100a5
Length = 92
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 33 ISADELKDVLR---SLGSKTSPEEVKRVMDEIDTDGDGYIDFKEFSTF 77
+S ELK++++ LG + + +M +D + D IDFKE+S F
Sbjct: 29 LSRKELKELIKKELCLG-EMKESSIDDLMKSLDKNSDQEIDFKEYSVF 75
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.132 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,191,885
Number of Sequences: 62578
Number of extensions: 232802
Number of successful extensions: 2412
Number of sequences better than 100.0: 439
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 1198
length of query: 153
length of database: 14,973,337
effective HSP length: 90
effective length of query: 63
effective length of database: 9,341,317
effective search space: 588502971
effective search space used: 588502971
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.7 bits)