Your job contains 1 sequence.
>031792
MKAETKAKIEGTVREILVKSDMTETTEFQIRKQASEKMGLDLSQPEYKAFVRHKSKEEQE
EEEEEENEAVKNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKELPS
AKGISLTEEQWSALRKNVSAIDTAVKKMQSRIM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031792
(153 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123416 - symbol:KELP species:3702 "Arabidopsi... 418 3.7e-39 1
TAIR|locus:2134618 - symbol:AT4G00980 species:3702 "Arabi... 199 3.9e-15 1
ASPGD|ASPL0000000236 - symbol:AN5806 species:162425 "Emer... 159 3.9e-14 2
TAIR|locus:2184747 - symbol:KIWI species:3702 "Arabidopsi... 171 5.6e-13 1
UNIPROTKB|A7YWC6 - symbol:SUB1 "Uncharacterized protein" ... 166 1.9e-12 1
UNIPROTKB|E2R6X3 - symbol:SUB1 "Uncharacterized protein" ... 164 3.1e-12 1
UNIPROTKB|F6Y016 - symbol:LOC479283 "Uncharacterized prot... 164 3.1e-12 1
UNIPROTKB|J9P938 - symbol:J9P938 "Uncharacterized protein... 164 3.1e-12 1
UNIPROTKB|P53999 - symbol:SUB1 "Activated RNA polymerase ... 164 3.1e-12 1
UNIPROTKB|I3LQI3 - symbol:SUB1 "Uncharacterized protein" ... 164 3.1e-12 1
MGI|MGI:104811 - symbol:Sub1 "SUB1 homolog (S. cerevisiae... 164 3.1e-12 1
RGD|621582 - symbol:Sub1 "SUB1 homolog (S. cerevisiae)" s... 164 3.1e-12 1
UNIPROTKB|Q5ZK63 - symbol:SUB1 "Activated RNA polymerase ... 162 5.0e-12 1
UNIPROTKB|J9NRQ9 - symbol:SUB1 "Uncharacterized protein" ... 161 6.4e-12 1
ZFIN|ZDB-GENE-050522-151 - symbol:sub1a "SUB1 homolog a (... 160 8.2e-12 1
ZFIN|ZDB-GENE-040718-209 - symbol:sub1b "SUB1 homolog b (... 159 1.0e-11 1
UNIPROTKB|G4NEJ8 - symbol:MGG_00780 "Uncharacterized prot... 136 2.9e-09 1
TAIR|locus:2184732 - symbol:AT5G09240 species:3702 "Arabi... 106 7.3e-09 2
UNIPROTKB|F1NKA2 - symbol:LOC777191 "Uncharacterized prot... 132 7.6e-09 1
UNIPROTKB|F1S1P4 - symbol:F1S1P4 "Uncharacterized protein... 128 2.0e-08 1
POMBASE|SPAC16A10.02 - symbol:sub1 "transcription coactiv... 128 2.0e-08 1
WB|WBGene00011743 - symbol:T13F2.2 species:6239 "Caenorha... 126 3.3e-08 1
DICTYBASE|DDB_G0275335 - symbol:DDB_G0275335 "ssDNA-bindi... 123 6.8e-08 1
FB|FBgn0015299 - symbol:Ssb-c31a "Single stranded-binding... 122 8.7e-08 1
SGD|S000004642 - symbol:SUB1 "Transcriptional coactivator... 127 9.2e-08 1
DICTYBASE|DDB_G0270054 - symbol:DDB_G0270054 "ssDNA-bindi... 119 1.8e-07 1
UNIPROTKB|G1K2Z2 - symbol:LOC777191 "Uncharacterized prot... 115 4.8e-07 1
TAIR|locus:2019469 - symbol:AT1G64490 "AT1G64490" species... 108 2.6e-06 1
CGD|CAL0000694 - symbol:orf19.5666 species:5476 "Candida ... 107 3.4e-06 1
UNIPROTKB|Q59UQ4 - symbol:CaO19.13111 "Putative uncharact... 107 3.4e-06 1
TAIR|locus:2165780 - symbol:AT5G42060 species:3702 "Arabi... 102 1.1e-05 1
>TAIR|locus:2123416 [details] [associations]
symbol:KELP species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003173 InterPro:IPR009044
InterPro:IPR009057 Pfam:PF02229 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 GO:GO:0003713 InterPro:IPR014876 Pfam:PF08766
EMBL:AL161518 EMBL:AF080118 EMBL:AL049525 EMBL:AF053303
EMBL:AY085896 EMBL:BT005847 IPI:IPI00522129 PIR:T52114
RefSeq:NP_001078372.1 RefSeq:NP_192830.1 UniGene:At.21693
ProteinModelPortal:O65155 SMR:O65155 IntAct:O65155 PaxDb:O65155
PRIDE:O65155 DNASU:826690 EnsemblPlants:AT4G10920.1
EnsemblPlants:AT4G10920.2 GeneID:826690 KEGG:ath:AT4G10920
GeneFarm:2402 TAIR:At4g10920 eggNOG:NOG299238 HOGENOM:HOG000238208
InParanoid:O65155 OMA:LVSIREY PhylomeDB:O65155
ProtClustDB:CLSN2686069 Genevestigator:O65155 GermOnline:AT4G10920
Gene3D:2.30.31.10 InterPro:IPR017415 PIRSF:PIRSF038156
SUPFAM:SSF54447 Uniprot:O65155
Length = 165
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 91/165 (55%), Positives = 115/165 (69%)
Query: 1 MKAETKAKIEGTVREILVKSDMTETTEFQIRKQASEKMGLDLSQPEYKAFVR---HKSKX 57
M+ ETK KIE TV EIL +SDM E TEF++RK ASEK+ +DLS+ +KAFVR K
Sbjct: 1 MEKETKEKIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFLD 60
Query: 58 XXXXXXXXXXXAVKND----------NAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSI 107
K + N E+DD+G+LIIC+L+ KRRVTIQ+FKGK+LVSI
Sbjct: 61 EERAREYENSQVNKEEEDGDKDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSI 120
Query: 108 REYYTKGGKELPSAKGISLTEEQWSALRKNVSAIDTAVKKMQSRI 152
REYY K GKELP++KGISLT+EQWS +KN+ AI+ AVKKM+SR+
Sbjct: 121 REYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIENAVKKMESRV 165
>TAIR|locus:2134618 [details] [associations]
symbol:AT4G00980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR003173 InterPro:IPR009057
Pfam:PF02229 PROSITE:PS50158 SMART:SM00343 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.60 GO:GO:0003713 InterPro:IPR014876 Pfam:PF08766
EMBL:BT005886 EMBL:AK117983 IPI:IPI00544798 RefSeq:NP_567205.2
UniGene:At.34490 ProteinModelPortal:Q8GXX5 SMR:Q8GXX5 IntAct:Q8GXX5
EnsemblPlants:AT4G00980.1 GeneID:827935 KEGG:ath:AT4G00980
TAIR:At4g00980 HOGENOM:HOG000215958 InParanoid:Q8GXX5
PhylomeDB:Q8GXX5 ProtClustDB:CLSN2690681 Genevestigator:Q8GXX5
Uniprot:Q8GXX5
Length = 488
Score = 199 (75.1 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 53/163 (32%), Positives = 84/163 (51%)
Query: 1 MKAETKAKIEGTVREILVKSDMTETTEFQIRKQASEKMGLDLSQPEYKAFVRHKSKXXXX 60
M+ KIE TV+ IL +SDM + TEF++R AS K+G+DLS +K VR +
Sbjct: 12 MEIVATQKIEETVKSILSESDMDQMTEFKLRLDASAKLGIDLSGTNHKKLVRDVLEVFLL 71
Query: 61 XXXXXXX-----XAVKNDN-----AEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREY 110
KN+ A E IC+L++K+ T+Q ++G+ +SI
Sbjct: 72 STPGEALVPETVAPAKNETVSVAAASVGGEDERFICKLSEKQNATVQRYRGQPFLSI--- 128
Query: 111 YTKGGKELPSA-KGISLTEEQWSALRKNVSAIDTAVKKMQSRI 152
G +E A +G L+ QWS ++KN +AI+ +K+ QS++
Sbjct: 129 ---GSQEHGKAFRGAHLSTNQWSVIKKNFAAIEDGIKQCQSKL 168
>ASPGD|ASPL0000000236 [details] [associations]
symbol:AN5806 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355 GO:GO:0003677
EMBL:BN001301 GO:GO:0003713 EMBL:AACD01000100 eggNOG:NOG299238
Gene3D:2.30.31.10 SUPFAM:SSF54447 OrthoDB:EOG4WQ4C5
RefSeq:XP_663410.1 ProteinModelPortal:Q5B0X4
EnsemblFungi:CADANIAT00007241 GeneID:2871080 KEGG:ani:AN5806.2
HOGENOM:HOG000213471 OMA:LVNIREY Uniprot:Q5B0X4
Length = 168
Score = 159 (61.0 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 75 AEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKELPSAKGISLTEEQWSAL 134
A +D I +++K RRVTI F+GKT+V+IREYY K G+ELP KGISL +Q+S+L
Sbjct: 46 ARKEDSNGDIYWEISKMRRVTISSFRGKTMVNIREYYEKDGEELPGKKGISLPIDQFSSL 105
Score = 36 (17.7 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 1 MKAETKAKIEGTVREILVKSDMTETTEFQIRKQASEKMGLDLSQPEYKA 49
M ++++ ++ V LV D ++ + R A + G D S+PE A
Sbjct: 1 MASQSRKRVSEVVDHSLV--DKPPLSK-KSRTNAPDVAGFDNSRPELVA 46
>TAIR|locus:2184747 [details] [associations]
symbol:KIWI species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AL391712 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447 EMBL:AF053302
EMBL:BT004745 IPI:IPI00531083 PIR:T52113 RefSeq:NP_196487.1
UniGene:At.10039 ProteinModelPortal:O65154 SMR:O65154 IntAct:O65154
STRING:O65154 PaxDb:O65154 PRIDE:O65154 EnsemblPlants:AT5G09250.1
GeneID:830784 KEGG:ath:AT5G09250 TAIR:At5g09250
HOGENOM:HOG000239157 InParanoid:O65154 OMA:WIDIREF PhylomeDB:O65154
ProtClustDB:CLSN2916867 Genevestigator:O65154 GermOnline:AT5G09250
Uniprot:O65154
Length = 107
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 78 DDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKELPSAKGISLTEEQWSALRKN 137
D ++++C ++K RRV+++++ GK + IRE+Y K GK LP KGISL+ +QW+ LR +
Sbjct: 36 DQSDDIVVCNISKNRRVSVRNWNGKIWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNH 95
Query: 138 VSAIDTAVKKM 148
I+ A+ +
Sbjct: 96 AEDIEKALSDL 106
>UNIPROTKB|A7YWC6 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0005667 GO:GO:0003713
GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802 CTD:10923
HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2 EMBL:DAAA02050690
EMBL:BC134490 IPI:IPI00695331 RefSeq:NP_001098877.1
UniGene:Bt.23529 SMR:A7YWC6 STRING:A7YWC6
Ensembl:ENSBTAT00000029284 GeneID:533984 KEGG:bta:533984
InParanoid:A7YWC6 NextBio:20876218 Uniprot:A7YWC6
Length = 127
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R V+++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 53 KQSSSSRDD--NMF--QIGKMRYVSVRDFKGKVLIDIREYWMDAEGEMKPGRKGISLNPE 108
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 109 QWSQLKEQISDIDDAVRKL 127
>UNIPROTKB|E2R6X3 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10
SUPFAM:SSF54447 RefSeq:XP_536425.3 Ensembl:ENSCAFT00000029964
GeneID:479283 KEGG:cfa:479283 NextBio:20854490 Uniprot:E2R6X3
Length = 127
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R V+++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 53 KQSSSSRDD--NMF--QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPE 108
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 109 QWSQLKEQISDIDDAVRKL 127
>UNIPROTKB|F6Y016 [details] [associations]
symbol:LOC479283 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:QWNQLKD Ensembl:ENSCAFT00000029964
EMBL:AAEX03003186 EMBL:AAEX03003187 Uniprot:F6Y016
Length = 144
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R V+++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 70 KQSSSSRDD--NMF--QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPE 125
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 126 QWSQLKEQISDIDDAVRKL 144
>UNIPROTKB|J9P938 [details] [associations]
symbol:J9P938 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 EMBL:AAEX03002980
Ensembl:ENSCAFT00000026464 OMA:VDIREHY Uniprot:J9P938
Length = 132
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R V+++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 58 KQSSSSRDD--NMF--QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPE 113
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 114 QWSQLKEQISDIDDAVRKL 132
>UNIPROTKB|P53999 [details] [associations]
symbol:SUB1 "Activated RNA polymerase II transcriptional
coactivator p15" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10
SUPFAM:SSF54447 CTD:10923 HOVERGEN:HBG028243 EMBL:X79805
EMBL:U12979 EMBL:BC009610 EMBL:BC010537 EMBL:BC018189 EMBL:BC022339
IPI:IPI00221222 PIR:A54670 RefSeq:NP_006704.3 UniGene:Hs.229641
PDB:1PCF PDB:2C62 PDB:2PHE PDBsum:1PCF PDBsum:2C62 PDBsum:2PHE
ProteinModelPortal:P53999 SMR:P53999 DIP:DIP-29044N IntAct:P53999
MINT:MINT-138673 STRING:P53999 PhosphoSite:P53999 DMDM:1709514
PaxDb:P53999 PeptideAtlas:P53999 PRIDE:P53999
Ensembl:ENST00000265073 Ensembl:ENST00000502897
Ensembl:ENST00000506237 Ensembl:ENST00000512913
Ensembl:ENST00000515355 GeneID:10923 KEGG:hsa:10923 UCSC:uc003jhs.2
GeneCards:GC05P032622 HGNC:HGNC:19985 HPA:CAB015351 HPA:HPA001311
MIM:600503 neXtProt:NX_P53999 PharmGKB:PA142670858
InParanoid:P53999 OMA:QWNQLKD OrthoDB:EOG4NS3D2 PhylomeDB:P53999
ChiTaRS:SUB1 EvolutionaryTrace:P53999 GenomeRNAi:10923
NextBio:41499 ArrayExpress:P53999 Bgee:P53999 CleanEx:HS_SUB1
Genevestigator:P53999 GermOnline:ENSG00000113387 Uniprot:P53999
Length = 127
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R V+++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 53 KQSSSSRDD--NMF--QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPE 108
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 109 QWSQLKEQISDIDDAVRKL 127
>UNIPROTKB|I3LQI3 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0005667 GO:GO:0003713
GO:GO:0003697 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:QWNQLKD EMBL:FP085384
Ensembl:ENSSSCT00000023763 Uniprot:I3LQI3
Length = 134
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R V+++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 60 KQSSSSRDD--NMF--QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPE 115
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 116 QWSQLKEQISDIDDAVRKL 134
>MGI|MGI:104811 [details] [associations]
symbol:Sub1 "SUB1 homolog (S. cerevisiae)" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 MGI:MGI:104811
GO:GO:0005730 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10
SUPFAM:SSF54447 HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802
CTD:10923 HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2
ChiTaRS:SUB1 EMBL:J03750 EMBL:AK048371 EMBL:AK049260 EMBL:AK132021
EMBL:AK146335 EMBL:AK151734 EMBL:AK154114 EMBL:BC010967
IPI:IPI00225633 PIR:A28084 RefSeq:NP_035424.1 UniGene:Mm.41746
ProteinModelPortal:P11031 SMR:P11031 STRING:P11031
PhosphoSite:P11031 PaxDb:P11031 PRIDE:P11031
Ensembl:ENSMUST00000022816 Ensembl:ENSMUST00000110504 GeneID:20024
KEGG:mmu:20024 UCSC:uc007vhj.1 InParanoid:P11031 NextBio:297547
Bgee:P11031 CleanEx:MM_SUB1 Genevestigator:P11031
GermOnline:ENSMUSG00000022205 Uniprot:P11031
Length = 127
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R V+++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 53 KQSSSSRDD--NMF--QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNME 108
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 109 QWSQLKEQISDIDDAVRKL 127
>RGD|621582 [details] [associations]
symbol:Sub1 "SUB1 homolog (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0003697 "single-stranded DNA binding"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] InterPro:IPR003173 InterPro:IPR009044
Pfam:PF02229 RGD:621582 GO:GO:0005634 GO:GO:0005730 GO:GO:0006357
GO:GO:0006351 GO:GO:0005667 GO:GO:0003713 GO:GO:0003697
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 CTD:10923 HOVERGEN:HBG028243 OMA:QWNQLKD
OrthoDB:EOG4NS3D2 EMBL:BC088346 EMBL:K02816 IPI:IPI00208123
PIR:A23063 RefSeq:NP_001009618.1 UniGene:Rn.231328 UniGene:Rn.8706
ProteinModelPortal:Q63396 SMR:Q63396 IntAct:Q63396
MINT:MINT-4598677 STRING:Q63396 PRIDE:Q63396
Ensembl:ENSRNOT00000015443 GeneID:192269 KEGG:rno:192269
InParanoid:Q63396 NextBio:622964 Genevestigator:Q63396
GermOnline:ENSRNOG00000011558 Uniprot:Q63396
Length = 127
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R V+++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 53 KQSSSSRDD--NMF--QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNME 108
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 109 QWSQLKEQISDIDDAVRKL 127
>UNIPROTKB|Q5ZK63 [details] [associations]
symbol:SUB1 "Activated RNA polymerase II transcriptional
coactivator p15" species:9031 "Gallus gallus" [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 EMBL:AJ720221 IPI:IPI00570734
RefSeq:NP_001008479.1 UniGene:Gga.11479 HSSP:P53999
ProteinModelPortal:Q5ZK63 SMR:Q5ZK63 STRING:Q5ZK63 PRIDE:Q5ZK63
GeneID:427425 KEGG:gga:427425 CTD:10923 eggNOG:NOG280527
HOVERGEN:HBG028243 NextBio:20828685 Uniprot:Q5ZK63
Length = 126
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 44/136 (32%), Positives = 70/136 (51%)
Query: 14 REILVKSDMTETTEFQIRKQASEKMGLDLSQPEYKAFVRHKSKXXXXXXXXXXXXAVKND 73
+E++ S ++ ++ K+A K +P K SK A +
Sbjct: 5 KELVSSSSSASDSDSEVDKKAKRKKQAAPEKPVKKQKTGESSKG-----------AASSK 53
Query: 74 NAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYT-KGGKELPSAKGISLTEEQWS 132
+ DE N+ Q+ K R V+++DFKGK L+ IREY+ + G+ P KGISL EQW+
Sbjct: 54 QSSNRDE-NMF--QIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWN 110
Query: 133 ALRKNVSAIDTAVKKM 148
L++ +S ID AV+K+
Sbjct: 111 QLKEQISDIDDAVRKL 126
>UNIPROTKB|J9NRQ9 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:IFKITRT EMBL:AAEX03016493
Ensembl:ENSCAFT00000037797 Uniprot:J9NRQ9
Length = 125
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 71 KNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEE 129
K ++ DD N+ Q+ K R ++++DFKGK L+ IREY+ E+ P KGISL E
Sbjct: 51 KQSSSSRDD--NMF--QIGKMRYLSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPE 106
Query: 130 QWSALRKNVSAIDTAVKKM 148
QWS L++ +S ID AV+K+
Sbjct: 107 QWSQLKEQISDIDDAVRKL 125
>ZFIN|ZDB-GENE-050522-151 [details] [associations]
symbol:sub1a "SUB1 homolog a (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
ZFIN:ZDB-GENE-050522-151 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802
HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2 EMBL:BX664706
EMBL:BC095096 IPI:IPI00503863 RefSeq:NP_001018376.1
UniGene:Dr.84297 SMR:Q504B1 STRING:Q504B1
Ensembl:ENSDART00000075485 Ensembl:ENSDART00000143848 GeneID:553561
KEGG:dre:553561 CTD:553561 InParanoid:Q504B1 NextBio:20880301
Uniprot:Q504B1
Length = 123
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 69 AVKNDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYT-KGGKELPSAKGISLT 127
A K+ ++ +D N+ Q+ K R V+++DFKGK L+ IREY+ + G+ P KGISL
Sbjct: 47 ASKSSSSNKND--NMF--QIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLN 102
Query: 128 EEQWSALRKNVSAIDTAVKK 147
EQW+ L++ +S ID AVK+
Sbjct: 103 PEQWNQLKEQISEIDDAVKR 122
>ZFIN|ZDB-GENE-040718-209 [details] [associations]
symbol:sub1b "SUB1 homolog b (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
ZFIN:ZDB-GENE-040718-209 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 EMBL:BX470118 GeneTree:ENSGT00390000008802
HOVERGEN:HBG028243 OMA:LDQWKIL OrthoDB:EOG4NS3D2 EMBL:BC076294
IPI:IPI00505413 RefSeq:NP_001002505.1 UniGene:Dr.13991 SMR:Q6DGP6
Ensembl:ENSDART00000011229 GeneID:436778 KEGG:dre:436778 CTD:436778
InParanoid:Q6DGP6 NextBio:20831213 Uniprot:Q6DGP6
Length = 124
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 87 QLNKKRRVTIQDFKGKTLVSIREYYT-KGGKELPSAKGISLTEEQWSALRKNVSAIDTAV 145
Q+ K R V+++DFKGK L+ IREY+ + G+ P KGISL EQWS L++ +S ID A+
Sbjct: 62 QIGKLRYVSVRDFKGKVLIDIREYWMDQAGEMKPGKKGISLNPEQWSQLKEQMSDIDDAI 121
Query: 146 KK 147
K+
Sbjct: 122 KR 123
>UNIPROTKB|G4NEJ8 [details] [associations]
symbol:MGG_00780 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0006355 EMBL:CM001235 GO:GO:0003677 GO:GO:0003713
Gene3D:2.30.31.10 SUPFAM:SSF54447 RefSeq:XP_003718212.1 PDB:4AGH
PDBsum:4AGH ProteinModelPortal:G4NEJ8 EnsemblFungi:MGG_00780T0
GeneID:2674441 KEGG:mgr:MGG_00780 Uniprot:G4NEJ8
Length = 162
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 75 AEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKELPSAKGISLTEEQWSAL 134
++ D EGN +++ KRRV I FK ++IREYY GG+ P KGI LT +Q++A
Sbjct: 43 SQVDAEGNPF-WEISDKRRVGISQFKKMDFINIREYYEAGGEMKPGKKGIGLTVDQYTAF 101
Query: 135 RKNVSAIDTAVK 146
K + AI+ ++
Sbjct: 102 LKAIPAINAELR 113
>TAIR|locus:2184732 [details] [associations]
symbol:AT5G09240 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009408 "response to heat"
evidence=RCA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
EMBL:CP002688 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
Gene3D:2.30.31.10 SUPFAM:SSF54447 UniGene:At.10037 UniGene:At.70268
IPI:IPI00519075 RefSeq:NP_850798.2 UniGene:At.5322
ProteinModelPortal:F4KCI8 EnsemblPlants:AT5G09240.2 GeneID:830783
KEGG:ath:AT5G09240 OMA:RNHEEDI PhylomeDB:F4KCI8 Uniprot:F4KCI8
Length = 138
Score = 106 (42.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 78 DDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKELP--SAKGISLTEEQ 130
D+ ++ IC L+K RRV +++ G+ ++IR+++ K G LP S +GISL+ EQ
Sbjct: 35 DEIEDIFICNLDKNRRVFVRNCNGRIWIAIRQFFVKDGITLPCNSKQGISLSLEQ 89
Score = 38 (18.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 130 QWSALRKNVSAIDTAVKKM 148
QW+ LR + ID A+ ++
Sbjct: 117 QWNDLRNHEEDIDKALSEL 135
>UNIPROTKB|F1NKA2 [details] [associations]
symbol:LOC777191 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 IPI:IPI00570734 OMA:QWNQLKD
EMBL:AADN02060500 EMBL:AADN02060501 EMBL:AADN02060502
Ensembl:ENSGALT00000039243 Uniprot:F1NKA2
Length = 124
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 87 QLNKKRRVTIQDFKGKTLVSIREYYTKGGKELPSAKGISLTEEQWSALRKNVSAIDTAVK 146
Q+ K R V+++DFKGK L+ K G+ P KGISL EQW+ L++ +S ID AV+
Sbjct: 69 QIGKMRYVSVRDFKGKVLID------KEGEMKPGRKGISLNPEQWNQLKEQISDIDDAVR 122
Query: 147 KM 148
K+
Sbjct: 123 KL 124
>UNIPROTKB|F1S1P4 [details] [associations]
symbol:F1S1P4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 EMBL:CU914264 EMBL:FP102115
Ensembl:ENSSSCT00000013632 Ensembl:ENSSSCT00000017102
Uniprot:F1S1P4
Length = 123
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 87 QLNKKRRVTIQDFKGKTLVSIREYYTKGGKEL-PSAKGISLTEEQWSALRKNVSAIDTAV 145
Q+ K R V+++DFK K L+ IREY E+ P KGISL EQ + L++ +S D AV
Sbjct: 61 QIGKMRYVSVRDFKEKVLIDIREYQMDPEHEMKPGTKGISLNPEQQNQLKEQISDNDDAV 120
Query: 146 KKM 148
+K+
Sbjct: 121 RKV 123
>POMBASE|SPAC16A10.02 [details] [associations]
symbol:sub1 "transcription coactivator PC4"
species:4896 "Schizosaccharomyces pombe" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
PomBase:SPAC16A10.02 GO:GO:0005634 EMBL:CU329670 GO:GO:0006351
GO:GO:0003713 GO:GO:0003690 GO:GO:0003697 GO:GO:0060261
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
OrthoDB:EOG4WQ4C5 PIR:T37767 RefSeq:NP_594042.1
ProteinModelPortal:P87294 STRING:P87294 EnsemblFungi:SPAC16A10.02.1
GeneID:2542309 KEGG:spo:SPAC16A10.02 NextBio:20803370
Uniprot:P87294
Length = 136
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 90 KKRRVTIQDFKGKTLVSIREYYTKGGKELPSAKGISLTEEQWSALRKNVSAIDTAVKKMQ 149
+K+R+T+ +F+G V IREYY K G LP KGI+L +W L++ + +D ++ +
Sbjct: 36 EKKRITLSEFRGTRYVHIREYYEKDGDMLPGKKGIALNINEWKKLKQLIHEVDDSLGLVD 95
Query: 150 S 150
S
Sbjct: 96 S 96
>WB|WBGene00011743 [details] [associations]
symbol:T13F2.2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003713 EMBL:Z81122
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802 PIR:T24876
RefSeq:NP_501750.1 ProteinModelPortal:Q94045 SMR:Q94045
STRING:Q94045 PaxDb:Q94045 EnsemblMetazoa:T13F2.2.1
EnsemblMetazoa:T13F2.2.2 GeneID:188475 KEGG:cel:CELE_T13F2.2
UCSC:T13F2.2.1 CTD:188475 WormBase:T13F2.2 InParanoid:Q94045
OMA:LSTEQWE NextBio:938940 Uniprot:Q94045
Length = 124
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 78 DDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTK--GGKELPSAKGISLTEEQWSALR 135
D +GN + ++ R T+ FKGK V+IREYY K +PS KGISL++ QW+ L+
Sbjct: 56 DSDGNEMF-EIGNLRYATVSKFKGKEYVNIREYYIDRDSQKMMPSRKGISLSKAQWANLK 114
Query: 136 KNVSAID 142
+ ID
Sbjct: 115 DLIPEID 121
>DICTYBASE|DDB_G0275335 [details] [associations]
symbol:DDB_G0275335 "ssDNA-binding transcriptional
regulator" species:44689 "Dictyostelium discoideum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA;ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0003697 "single-stranded DNA binding" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 dictyBase:DDB_G0275335
GO:GO:0006357 EMBL:AAFI02000013 GO:GO:0005667 GO:GO:0003713
GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 InterPro:IPR017415
PIRSF:PIRSF038156 SUPFAM:SSF54447 RefSeq:XP_643662.1
ProteinModelPortal:Q553Q8 EnsemblProtists:DDB0216410 GeneID:8619927
KEGG:ddi:DDB_G0275335 InParanoid:Q553Q8 OMA:KEMRSKS
ProtClustDB:CLSZ2430970 Uniprot:Q553Q8
Length = 141
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 29 QIRKQASEKMGL-DLSQPEYKAFVRHKSKXXXXXXXXXXXXAVKNDNAEYDDEGNLIICQ 87
++ ++ E+ G D S E K V KSK + ND +
Sbjct: 29 EVEEEVEEEGGASDESGGEKKKVVVKKSKTPITSSSSSSSSSSTNDKS----------FN 78
Query: 88 LNKKRRVTIQDFKGKTLVSIREYYT-KGGKELPSAKGISLTEEQWSALRKNVSAIDTAVK 146
L+ KR+++ +FKG + IRE++ K G+ PS+KGISLT EQ+ + +N I +K
Sbjct: 79 LSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQFMVILENGDTIKDWIK 138
Query: 147 K 147
+
Sbjct: 139 E 139
>FB|FBgn0015299 [details] [associations]
symbol:Ssb-c31a "Single stranded-binding protein c31A"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=ISS;NAS;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0003713 "transcription coactivator activity" evidence=ISS]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0005634
GO:GO:0045892 EMBL:AE014134 GO:GO:0006351 GO:GO:0003713
GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 EMBL:U18971 EMBL:BT023261 PIR:S66164
RefSeq:NP_477136.1 UniGene:Dm.2642 ProteinModelPortal:Q9VLR5
SMR:Q9VLR5 MINT:MINT-1003322 STRING:Q9VLR5 PaxDb:Q9VLR5
PRIDE:Q9VLR5 EnsemblMetazoa:FBtr0079590 GeneID:34120
KEGG:dme:Dmel_CG8396 CTD:34120 FlyBase:FBgn0015299
InParanoid:Q9VLR5 OMA:LDQWKIL OrthoDB:EOG4DZ0BW PhylomeDB:Q9VLR5
GenomeRNAi:34120 NextBio:786953 Bgee:Q9VLR5 GermOnline:CG8396
Uniprot:Q9VLR5
Length = 110
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 72 NDNAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKELPSAKGISLTEEQW 131
N + + E L R+V I +F+G+ V IRE+Y KGG+ LP KGISL+ QW
Sbjct: 35 NSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYDKGGQILPGKKGISLSLIQW 94
Query: 132 SALRKNVSAIDTAVK 146
L + + A++
Sbjct: 95 KKLLEVAEEVTRAIE 109
>SGD|S000004642 [details] [associations]
symbol:SUB1 "Transcriptional coactivator" species:4932
"Saccharomyces cerevisiae" [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter"
evidence=IGI;IDA;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISS;IPI] [GO:0003713
"transcription coactivator activity" evidence=IEA;IGI;ISS;IPI]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IGI;IMP;IDA]
[GO:0006972 "hyperosmotic response" evidence=IGI] [GO:0070898 "RNA
polymerase III transcriptional preinitiation complex assembly"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
SGD:S000004642 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
GO:GO:0006972 EMBL:BK006946 GO:GO:0003713 GO:GO:0045945 EMBL:Z48502
GO:GO:0043618 GO:GO:0032968 GO:GO:0006369 eggNOG:NOG299238
Gene3D:2.30.31.10 SUPFAM:SSF54447 GO:GO:0070898 PIR:S52888
RefSeq:NP_013753.1 ProteinModelPortal:P54000 SMR:P54000
DIP:DIP-4696N IntAct:P54000 MINT:MINT-540355 STRING:P54000
PaxDb:P54000 EnsemblFungi:YMR039C GeneID:855055 KEGG:sce:YMR039C
CYGD:YMR039c GeneTree:ENSGT00390000008802 HOGENOM:HOG000000752
OMA:EREANAT OrthoDB:EOG4WQ4C5 NextBio:978301 Genevestigator:P54000
GermOnline:YMR039C Uniprot:P54000
Length = 292
Score = 127 (49.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 85 ICQLNKKRRVTIQDFKGKTLVSIREYY--TKGGKELPSAKGISLTEEQWSALRKNVSAID 142
I L K +RVT++ F+ L+ IREYY + G+ P KGISLTE+ + L K+ ID
Sbjct: 40 IFDLGKNKRVTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNID 99
Query: 143 TAVKKMQSR 151
A++++ S+
Sbjct: 100 EALRRLGSK 108
>DICTYBASE|DDB_G0270054 [details] [associations]
symbol:DDB_G0270054 "ssDNA-binding transcriptional
regulator" species:44689 "Dictyostelium discoideum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA;ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0003697 "single-stranded DNA binding" evidence=ISS]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
dictyBase:DDB_G0270054 EMBL:AAFI02000005 GO:GO:0006357
GO:GO:0005667 GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238
Gene3D:2.30.31.10 InterPro:IPR017415 PIRSF:PIRSF038156
SUPFAM:SSF54447 ProtClustDB:CLSZ2430970 RefSeq:XP_646504.1
ProteinModelPortal:Q55CH7 EnsemblProtists:DDB0220621 GeneID:8617464
KEGG:ddi:DDB_G0270054 InParanoid:Q55CH7 OMA:IFKITRT Uniprot:Q55CH7
Length = 129
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 26 TEFQIRKQASEKMGLDLSQPEYKAFVRHKSKXXXXXXXXXXXXAVKNDNAEYDDEGNLII 85
T + R ++K L + E K V+ KSK + + ++ N
Sbjct: 6 TRTKRRWTKNQKKILVMKVVEKKVVVK-KSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKS 64
Query: 86 CQLNKKRRVTIQDFKGKTLVSIREYYT-KGGKELPSAKGISLTEEQWSALRKNVSAIDTA 144
L+ KR+++ +FKG + IRE++ K G+ PS+KGISLT EQ + +N I
Sbjct: 65 FNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDW 124
Query: 145 VKK 147
+K+
Sbjct: 125 IKE 127
>UNIPROTKB|G1K2Z2 [details] [associations]
symbol:LOC777191 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10
SUPFAM:SSF54447 GeneTree:ENSGT00390000008802 EMBL:AADN02060500
EMBL:AADN02060501 EMBL:AADN02060502 Ensembl:ENSGALT00000005135
Uniprot:G1K2Z2
Length = 127
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 39/137 (28%), Positives = 63/137 (45%)
Query: 14 REILVKSDMTETTEFQIRKQASEKMGLDLSQPEYKAFVRHKSKXXXXXXXXXXXXAVKND 73
+E++ S ++ ++ K+A K +P K SK A +
Sbjct: 5 KELVSSSSSASDSDSEVDKKAKRKKQAAPEKPVKKQKTGESSKG-----------AASSK 53
Query: 74 NAEYDDEGNLIICQLNKKRRVTIQDFKGKTLVSIREYYTKGGKELPSAKG--ISLTEEQW 131
+ DE N+ Q+ K R V+++DFKGK L ++ K S G ISL EQW
Sbjct: 54 QSSNRDE-NMF--QIGKMRYVSVRDFKGKVLFYFILFFLPVDKSNKSKVGLSISLNPEQW 110
Query: 132 SALRKNVSAIDTAVKKM 148
+ L++ +S ID AV+K+
Sbjct: 111 NQLKEQISDIDDAVRKL 127
>TAIR|locus:2019469 [details] [associations]
symbol:AT1G64490 "AT1G64490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR009057 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 EMBL:AC009519
Gene3D:1.10.10.60 InterPro:IPR014876 Pfam:PF08766
HOGENOM:HOG000152477 ProtClustDB:CLSN2686431 EMBL:AY084856
EMBL:BT024574 EMBL:AK175745 IPI:IPI00542298 RefSeq:NP_564835.1
UniGene:At.35993 ProteinModelPortal:Q9SGW6 SMR:Q9SGW6 STRING:Q9SGW6
PaxDb:Q9SGW6 PRIDE:Q9SGW6 EnsemblPlants:AT1G64490.1 GeneID:842757
KEGG:ath:AT1G64490 TAIR:At1g64490 eggNOG:NOG304476 OMA:EKAIMTI
PhylomeDB:Q9SGW6 ArrayExpress:Q9SGW6 Genevestigator:Q9SGW6
Uniprot:Q9SGW6
Length = 124
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 4 ETKAKIEGTVREILVKSDMTETTEFQIRKQASEKMGLDLSQPEYKAFVR 52
+ K KI+ TV++IL +S + E TE + R++AS ++ LDLS+ YK VR
Sbjct: 14 DLKKKIKETVKKILKRSSLLEITEIKAREEASSELNLDLSRDPYKIIVR 62
>CGD|CAL0000694 [details] [associations]
symbol:orf19.5666 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0045945 "positive regulation
of transcription from RNA polymerase III promoter" evidence=IEA]
[GO:0006972 "hyperosmotic response" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0043618 "regulation of
transcription from RNA polymerase II promoter in response to
stress" evidence=IEA] [GO:0070898 "RNA polymerase III
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 CGD:CAL0000694
GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 EMBL:AACQ01000129
EMBL:AACQ01000128 Gene3D:2.30.31.10 SUPFAM:SSF54447
RefSeq:XP_713347.1 RefSeq:XP_713394.1 ProteinModelPortal:Q59UQ4
GeneID:3644958 GeneID:3645016 KEGG:cal:CaO19.13111
KEGG:cal:CaO19.5666 eggNOG:NOG275260 HOGENOM:HOG000248055
Uniprot:Q59UQ4
Length = 146
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 88 LNKKRRVTIQDFKGKTLVSIREYYT-KGGKELPSAKGISLTEEQWSALRKNVSAIDTAV 145
L+ K++VT++ + LV IRE+YT + G + P KGISLTE+ + L + + I A+
Sbjct: 19 LDSKKQVTVRKYNNVNLVDIREFYTDRDGVKRPGKKGISLTEDTYYKLLEATNKIQNAL 77
>UNIPROTKB|Q59UQ4 [details] [associations]
symbol:CaO19.13111 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 CGD:CAL0000694 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 EMBL:AACQ01000129 EMBL:AACQ01000128
Gene3D:2.30.31.10 SUPFAM:SSF54447 RefSeq:XP_713347.1
RefSeq:XP_713394.1 ProteinModelPortal:Q59UQ4 GeneID:3644958
GeneID:3645016 KEGG:cal:CaO19.13111 KEGG:cal:CaO19.5666
eggNOG:NOG275260 HOGENOM:HOG000248055 Uniprot:Q59UQ4
Length = 146
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 88 LNKKRRVTIQDFKGKTLVSIREYYT-KGGKELPSAKGISLTEEQWSALRKNVSAIDTAV 145
L+ K++VT++ + LV IRE+YT + G + P KGISLTE+ + L + + I A+
Sbjct: 19 LDSKKQVTVRKYNNVNLVDIREFYTDRDGVKRPGKKGISLTEDTYYKLLEATNKIQNAL 77
>TAIR|locus:2165780 [details] [associations]
symbol:AT5G42060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016592 "mediator complex"
evidence=IDA] InterPro:IPR009057 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 Gene3D:1.10.10.60
EMBL:AB017067 GO:GO:0016592 InterPro:IPR014876 Pfam:PF08766
EMBL:AY072311 EMBL:AY114547 IPI:IPI00541220 RefSeq:NP_199021.1
UniGene:At.30192 ProteinModelPortal:Q9FHX8 SMR:Q9FHX8 IntAct:Q9FHX8
STRING:Q9FHX8 PaxDb:Q9FHX8 PRIDE:Q9FHX8 DNASU:834211
EnsemblPlants:AT5G42060.1 GeneID:834211 KEGG:ath:AT5G42060
TAIR:At5g42060 eggNOG:NOG274548 HOGENOM:HOG000152477 OMA:SNLYKIT
PhylomeDB:Q9FHX8 ProtClustDB:CLSN2686431 Genevestigator:Q9FHX8
Uniprot:Q9FHX8
Length = 92
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 4 ETKAKIEGTVREILVKSDMTETTEFQIRKQASEKMGLDLSQPEYKAFVRHK 54
+ + KI+ TV++IL S++ + TE + R++AS K+ LDLSQ YK V+ +
Sbjct: 14 DLRRKIKKTVKKILESSNLYKITEIKAREEASLKLDLDLSQDPYKVIVKEE 64
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.336 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 153 141 0.00091 102 3 10 23 0.50 31
30 0.47 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 607 (65 KB)
Total size of DFA: 178 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.75u 0.18s 19.93t Elapsed: 00:00:01
Total cpu time: 19.75u 0.18s 19.93t Elapsed: 00:00:01
Start: Fri May 10 00:40:31 2013 End: Fri May 10 00:40:32 2013