BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031795
MTRGTPQKLSTVVVYRLPVISYDSIHSAENLLYLKNPTKTLGVREQPNSINSKTMSVAAA
RSVLRSTATPRAAVSGRLAAGIKPKAAPTSSPFRMPKQNPLSQRLFRSPVELSCCVETML
PFHTATASALLTSMLSVSRRSYGWTSEGQDKTR

High Scoring Gene Products

Symbol, full name Information P value
AT1G28395 protein from Arabidopsis thaliana 7.3e-27
AT2G33847 protein from Arabidopsis thaliana 4.3e-22
NFD6
AT2G20585
protein from Arabidopsis thaliana 2.6e-15
AT1G55205 protein from Arabidopsis thaliana 2.6e-08
AT5G47455 protein from Arabidopsis thaliana 2.9e-07
AT1G70350 protein from Arabidopsis thaliana 6.1e-07
AT4G17310 protein from Arabidopsis thaliana 2.1e-06
AT4G34265 protein from Arabidopsis thaliana 0.00035

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031795
        (153 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006152 - symbol:AT1G28395 "AT1G28395" speci...   302  7.3e-27   1
TAIR|locus:4010713673 - symbol:AT2G33847 species:3702 "Ar...   257  4.3e-22   1
TAIR|locus:505006258 - symbol:NFD6 "AT2G20585" species:37...   193  2.6e-15   1
TAIR|locus:4010713552 - symbol:AT1G55205 "AT1G55205" spec...   127  2.6e-08   1
TAIR|locus:505006678 - symbol:AT5G47455 "AT5G47455" speci...   117  2.9e-07   1
TAIR|locus:2016184 - symbol:AT1G70350 "AT1G70350" species...   114  6.1e-07   1
TAIR|locus:2130819 - symbol:AT4G17310 species:3702 "Arabi...   109  2.1e-06   1
TAIR|locus:505006558 - symbol:AT4G34265 "AT4G34265" speci...    88  0.00035   1


>TAIR|locus:505006152 [details] [associations]
            symbol:AT1G28395 "AT1G28395" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0006164 "purine nucleotide biosynthetic process"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
            HOGENOM:HOG000237694 EMBL:AY085292 EMBL:BT025573 EMBL:AK228142
            IPI:IPI00546694 RefSeq:NP_564308.1 RefSeq:NP_849722.1
            RefSeq:NP_973928.1 UniGene:At.40897 STRING:Q8LEQ7
            EnsemblPlants:AT1G28395.1 EnsemblPlants:AT1G28395.2
            EnsemblPlants:AT1G28395.3 GeneID:839737 KEGG:ath:AT1G28395
            TAIR:At1g28395 InParanoid:Q8LEQ7 PhylomeDB:Q8LEQ7
            ProtClustDB:CLSN2688055 Genevestigator:Q8LEQ7 Uniprot:Q8LEQ7
        Length = 95

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 61/97 (62%), Positives = 76/97 (78%)

Query:    57 VAAARSVLRSTATPRAAVSGRLAAGIKPKAAPTSSPFRMPKQNPLSQRLFRSPVELSCCV 116
             ++AARSV RS A+  ++ + R +AG KP  +   + FRMPKQ+PL+ R+FRSPVELSCCV
Sbjct:     1 MSAARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCV 60

Query:   117 ETMLPFHTATASALLTSMLSVSRRSYGWTSEGQDKTR 153
             ETMLP+HTATASALL SMLSVSRR  GW  +G D+TR
Sbjct:    61 ETMLPYHTATASALLNSMLSVSRR--GWIVDGLDETR 95


>TAIR|locus:4010713673 [details] [associations]
            symbol:AT2G33847 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005739 "mitochondrion"
            evidence=ISM] EMBL:CP002685 EMBL:DQ487510 IPI:IPI00846747
            RefSeq:NP_001078001.1 UniGene:At.37877 UniGene:At.72891
            EnsemblPlants:AT2G33847.1 GeneID:5007926 KEGG:ath:AT2G33847
            TAIR:At2g33847 OMA:KLPKQSP PhylomeDB:Q1G3S4 ProtClustDB:CLSN2699077
            Genevestigator:Q1G3S4 Uniprot:Q1G3S4
        Length = 93

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 57/89 (64%), Positives = 67/89 (75%)

Query:    57 VAAARSVLRSTATPRAAVSGRLAAGIKPKAAPTSSPFRMPKQNPLSQRLFRSPVELSCCV 116
             ++AARSV RS    RAAV+   +   KP  +   S F++PKQ+PLS R+FRSPVELSCCV
Sbjct:     1 MSAARSVFRS-GVGRAAVAALRST--KPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCV 57

Query:   117 ETMLPFHTATASALLTSMLSVSRRSYGWT 145
             ETMLP+HTATASALL SMLSVS RS  WT
Sbjct:    58 ETMLPYHTATASALLNSMLSVSGRSI-WT 85


>TAIR|locus:505006258 [details] [associations]
            symbol:NFD6 "AT2G20585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC007048 HOGENOM:HOG000237694
            EMBL:AY057495 EMBL:AY085547 EMBL:AY103298 RefSeq:NP_565478.1
            UniGene:At.26972 IntAct:Q93ZJ3 STRING:Q93ZJ3
            EnsemblPlants:AT2G20585.1 GeneID:816581 KEGG:ath:AT2G20585
            TAIR:At2g20585 InParanoid:Q93ZJ3 OMA:SPVEMSS
            ProtClustDB:CLSN2688278 Genevestigator:Q93ZJ3 Uniprot:Q93ZJ3
        Length = 100

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 46/93 (49%), Positives = 68/93 (73%)

Query:    57 VAAARSVLRSTATPRAAVS-GRLAAGIKPKAAPTSSPFRMP-KQNPLSQRLFRSPVELSC 114
             ++ ARS+LR+ ++  AA S GR A+  + K+AP    FR   +++PL   L R+PVELS 
Sbjct:     7 LSGARSMLRAASSRSAAASTGRFAS--QAKSAPPL--FRATARRSPLLSPL-RNPVELSF 61

Query:   115 CVETMLPFHTATASALLTSMLSVSRRSYGWTSE 147
             CVE++LP+H+ATASAL+TS LS+S ++YGW S+
Sbjct:    62 CVESLLPYHSATASALMTSKLSISGQTYGWLSD 94


>TAIR|locus:4010713552 [details] [associations]
            symbol:AT1G55205 "AT1G55205" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 EMBL:AC027034
            HOGENOM:HOG000237694 IPI:IPI00891930 RefSeq:NP_001117497.1
            UniGene:At.49462 UniGene:At.69368 EnsemblPlants:AT1G55205.2
            GeneID:5007805 KEGG:ath:AT1G55205 TAIR:At1g55205 OMA:SVESKSW
            PhylomeDB:B3H4H0 ProtClustDB:CLSN2699057 Genevestigator:B3H4H0
            Uniprot:B3H4H0
        Length = 103

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query:    91 SPFRMPKQNPLSQRL---FRSPVELSCCVETMLPFHTATASALLTSMLSVSRRSYGWTSE 147
             SP +    +  + R+   FR PVELSCC+ +MLP H+A ASA L S LSV  +S+G   +
Sbjct:    33 SPIKSSSPSSATSRINQSFRLPVELSCCL-SMLPLHSAIASARLISSLSVESKSWGLVPQ 91

Query:   148 GQ 149
             GQ
Sbjct:    92 GQ 93


>TAIR|locus:505006678 [details] [associations]
            symbol:AT5G47455 "AT5G47455" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            GO:GO:0005739 EMBL:CP002688 UniGene:At.66689 IPI:IPI00533845
            RefSeq:NP_568683.2 EnsemblPlants:AT5G47455.4 GeneID:834795
            KEGG:ath:AT5G47455 OMA:RNSPIGT Uniprot:F4JX57
        Length = 116

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 37/98 (37%), Positives = 56/98 (57%)

Query:    56 SVAAARSVLRSTATPRAAVSGRLAAGIKPKAAPTSSPFRMPKQ---NPLSQRLF-RSPVE 111
             SV++ +S +RS+       +  +  G  P AA +S+ FR+P +   +PL +  F R P E
Sbjct:    10 SVSSFKSAIRSSFR-----NSPIGTGSSPAAA-SSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query:   112 LSCCVETMLPFHTATASALLTSMLSV-SRRSYGWTSEG 148
             L C V+++LP H+  A+A LTS LS  SR S   T +G
Sbjct:    64 LGC-VQSLLPLHSTVAAARLTSCLSTTSRSSRALTQDG 100


>TAIR|locus:2016184 [details] [associations]
            symbol:AT1G70350 "AT1G70350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:BT010485 EMBL:AK175590
            EMBL:AK176706 IPI:IPI00526159 RefSeq:NP_177192.2 UniGene:At.10654
            IntAct:Q6NQH1 EnsemblPlants:AT1G70350.1 GeneID:843371
            KEGG:ath:AT1G70350 TAIR:At1g70350 InParanoid:Q6NQH1 OMA:SCLSEGF
            ProtClustDB:CLSN2918452 Genevestigator:Q6NQH1 Uniprot:Q6NQH1
        Length = 105

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 36/103 (34%), Positives = 58/103 (56%)

Query:    48 NSINSKTMSVAAARSVL--RSTATPRAAVSGRLAAGIKPKAAPTSSPFRMPKQNPLSQRL 105
             N +     + +++  +L  RS+A   A+  G+ +AGI      +SS    P    L+   
Sbjct:     4 NGVRRALQASSSSGKILFGRSSAATSASKIGK-SAGIAFGNGSSSST--RPSLRRLT--F 58

Query:   106 FRSPVELSCCVETMLPFHTATASALLTSMLSVSRRSYGWTSEG 148
              R PVELS  + +++P H+ TASALLTS+LS+S +++   SEG
Sbjct:    59 SRVPVELSAGI-SLIPLHSVTASALLTSLLSLSNQNWSCLSEG 100


>TAIR|locus:2130819 [details] [associations]
            symbol:AT4G17310 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002687
            UniGene:At.26556 EMBL:AY050862 EMBL:BT010622 EMBL:AK175517
            IPI:IPI00546833 RefSeq:NP_193463.1 EnsemblPlants:AT4G17310.1
            GeneID:827444 KEGG:ath:AT4G17310 TAIR:At4g17310 InParanoid:Q949V8
            OMA:CRRFISK PhylomeDB:Q949V8 ProtClustDB:CLSN2680468
            Genevestigator:Q949V8 Uniprot:Q949V8
        Length = 99

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 31/81 (38%), Positives = 44/81 (54%)

Query:    71 RAAVSG---RLAAGIKPKAAPTSSPFRMPKQNPLSQRLFRSPVELSCCVETMLPFHTATA 127
             RA+VS     L +     +A +S+ FR+P Q        R P EL C V+++LP H+  A
Sbjct:    11 RASVSSLKSTLRSTTGSTSAASSAGFRLPSQPTRHFSFSRCPSELGC-VQSLLPLHSTVA 69

Query:   128 SALLTSMLSVSRRSYGWTSEG 148
             +A LTS LS + RS    S+G
Sbjct:    70 AARLTSCLSTTSRSSRALSQG 90


>TAIR|locus:505006558 [details] [associations]
            symbol:AT4G34265 "AT4G34265" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 HOGENOM:HOG000237694
            ProtClustDB:CLSN2688123 EMBL:AY086804 EMBL:BT004935 EMBL:AK118797
            EMBL:AK175209 EMBL:AK175277 EMBL:AK175290 EMBL:AK175532
            EMBL:AK175706 EMBL:AK175886 EMBL:AK176172 EMBL:AK176282
            EMBL:AK176497 EMBL:AK176537 EMBL:AK176565 EMBL:AK176658
            EMBL:AK176803 IPI:IPI00548379 RefSeq:NP_567963.3 UniGene:At.25513
            UniGene:At.75113 EnsemblPlants:AT4G34265.1 GeneID:829576
            KEGG:ath:AT4G34265 TAIR:At4g34265 InParanoid:Q8LC44 OMA:FTNPRNL
            PhylomeDB:Q8LC44 Genevestigator:Q8LC44 Uniprot:Q8LC44
        Length = 94

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 32/92 (34%), Positives = 45/92 (48%)

Query:    65 RSTATPRAAVSGRLAAGIKPKAAPTSSPFRMPKQNPLSQRLFRS---PVELS--CCVETM 119
             RS A  R+ VS    A    ++ P + P   P Q+ L +R F S   P  L    C E+ 
Sbjct:     4 RSAA--RSFVSATARAP-SLRSPPPTLPRLRPSQSSLPRRRFASFTNPRNLGELGCTESF 60

Query:   120 LPFHTATASALLTSMLSVSRRSYGWTSEGQDK 151
             LP +   A+A LTS L+V+ R++   S G  K
Sbjct:    61 LPLYNVVAAARLTSHLNVNLRAFCELSNGNGK 92


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.125   0.351    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       153   0.00081  105 3  11 23  0.50    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  122 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.63u 0.11s 17.74t   Elapsed:  00:00:01
  Total cpu time:  17.63u 0.11s 17.74t   Elapsed:  00:00:01
  Start:  Tue May 21 00:48:29 2013   End:  Tue May 21 00:48:30 2013

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