BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031803
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P59231|R10A3_ARATH 60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC
PE=2 SV=1
Length = 217
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/133 (89%), Positives = 128/133 (96%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSKLQS+A+REA+SSI+ + KETK RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1 MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
PKMK+CMLGDAQHVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASESVIKQI
Sbjct: 61 PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120
Query: 121 PRLLGPGLNKAGK 133
PRLLGPGLNKAGK
Sbjct: 121 PRLLGPGLNKAGK 133
>sp|Q8VZB9|R10A1_ARATH 60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA
PE=2 SV=1
Length = 216
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/133 (87%), Positives = 125/133 (93%), Gaps = 1/133 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSKLQS+A+REA+++I S E KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPR
Sbjct: 1 MSKLQSEAVREAITTITGKS-EAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
PKMK+CMLGDAQHVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASESVIKQI
Sbjct: 60 PKMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 119
Query: 121 PRLLGPGLNKAGK 133
PRLLGPGLNKAGK
Sbjct: 120 PRLLGPGLNKAGK 132
>sp|P59230|R10A2_ARATH 60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB
PE=2 SV=1
Length = 216
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/133 (86%), Positives = 124/133 (93%), Gaps = 1/133 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSKLQS+A+REA+++I S+E KKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPR
Sbjct: 1 MSKLQSEAVREAITTIKGKSEE-KKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
PKMK+CMLGDAQHVEEAEK+GL MDVE LKKLNKNKKLVKKLAK YHAFLASESVIKQI
Sbjct: 60 PKMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQI 119
Query: 121 PRLLGPGLNKAGK 133
PRLLGPGLNKAGK
Sbjct: 120 PRLLGPGLNKAGK 132
>sp|Q7RZS0|RL10A_NEUCR 60S ribosomal protein L10a OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rpl-10a PE=3 SV=1
Length = 217
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ A+R+ V+ +++YS ETKKRNF ET+ELQIGLKNYDPQ+DKRFSG+++LP IPR
Sbjct: 1 MSKISVAAVRQHVTDLLEYSNETKKRNFLETVELQIGLKNYDPQRDKRFSGTIRLPSIPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P M +C+LGD ++ A+ G+D M V+ LKKLNKNKKL+KKLA+KY AF+ASE++IKQI
Sbjct: 61 PNMSICILGDQHDIDRAKHGGVDAMSVDDLKKLNKNKKLIKKLARKYDAFVASEALIKQI 120
Query: 121 PRLLGPGLNKAGKKVPYPC 139
PRLLGPGL+KAG K P P
Sbjct: 121 PRLLGPGLSKAG-KFPTPV 138
>sp|Q9VTP4|R10AB_DROME 60S ribosomal protein L10a-2 OS=Drosophila melanogaster GN=RpL10Ab
PE=2 SV=2
Length = 217
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L E V+ +++ S + KKR F ET+ELQIGLKNYDPQKDKRFSG+VKL HIPRP
Sbjct: 3 SKVSRDTLYEGVNGLLEASAK-KKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
KMKVC+LGD QH +EA+ +D+MD E LKKLNKNKKLVKKLAK Y AFLASES+IKQIP
Sbjct: 62 KMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGK 133
RLLGPGLNKAGK
Sbjct: 122 RLLGPGLNKAGK 133
>sp|Q963B6|RL10A_SPOFR 60S ribosomal protein L10a OS=Spodoptera frugiperda GN=RpL10A PE=2
SV=1
Length = 217
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L E V++++Q SK+ KKRNF ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRP
Sbjct: 3 SKVSRDTLYECVNAVLQASKD-KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
KM+VC+LGD QH +EA+ + + MD E LKKLNKNKKLVKKLAKKY AFLASES+IKQIP
Sbjct: 62 KMQVCVLGDQQHCDEAKSLTVPCMDAEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGK 133
RLLGPGLNKAGK
Sbjct: 122 RLLGPGLNKAGK 133
>sp|Q9SW75|RL10A_CHLRE 60S ribosomal protein L10a OS=Chlamydomonas reinhardtii GN=RPL10A
PE=2 SV=1
Length = 213
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 115/138 (83%), Gaps = 3/138 (2%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ +D LRE+VS++V+ +K TK R F ET+ELQIGLKNYDPQKDKRFSGSV+LP +PR
Sbjct: 1 MSKISNDVLRESVSALVEGAK-TKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLPFVPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P+M+V GD +H E+A IG+D VE LKKLNKNKKLVKKLA+ YHAFLAS+SVIKQI
Sbjct: 60 PRMRV-RAGDVKHCEQAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDSVIKQI 118
Query: 121 PRLLGPGLNKAGKKVPYP 138
PRLLGPGLNKAG K P P
Sbjct: 119 PRLLGPGLNKAG-KFPAP 135
>sp|Q9UVJ4|RL10A_CANAL 60S ribosomal protein L10a OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=RPL10A PE=3 SV=2
Length = 217
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/139 (65%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ S +RE V +++YS ETKKRNF ET+ELQ+GLKNYDPQ+DKRFSG++KLP +PR
Sbjct: 1 MSKITSSGVRENVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P M +C+ GDA V+ A+ +G+D M V+ LKKLNKNKKL+KKLAKKY+AF+ASE +IKQI
Sbjct: 61 PNMTICIFGDAFDVDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQI 120
Query: 121 PRLLGPGLNKAGKKVPYPC 139
PRLLGP L+KAG K P P
Sbjct: 121 PRLLGPTLSKAG-KFPTPV 138
>sp|P0CX44|RL1B_YEAST 60S ribosomal protein L1-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL1B PE=1 SV=1
Length = 217
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ S +RE V +++YS ETKKRNF ET+ELQ+GLKNYDPQ+DKRFSGS+KLP+ PR
Sbjct: 1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P M +C+ GDA V+ A+ G+D M V+ LKKLNKNKKL+KKL+KKY+AF+ASE +IKQ+
Sbjct: 61 PNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQV 120
Query: 121 PRLLGPGLNKAGKKVPYP 138
PRLLGP L+KAG K P P
Sbjct: 121 PRLLGPQLSKAG-KFPTP 137
>sp|P0CX43|RL1A_YEAST 60S ribosomal protein L1-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL1A PE=1 SV=1
Length = 217
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ S +RE V +++YS ETKKRNF ET+ELQ+GLKNYDPQ+DKRFSGS+KLP+ PR
Sbjct: 1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P M +C+ GDA V+ A+ G+D M V+ LKKLNKNKKL+KKL+KKY+AF+ASE +IKQ+
Sbjct: 61 PNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQV 120
Query: 121 PRLLGPGLNKAGKKVPYP 138
PRLLGP L+KAG K P P
Sbjct: 121 PRLLGPQLSKAG-KFPTP 137
>sp|Q6FRF5|RL10A_CANGA 60S ribosomal protein L10a OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL10A
PE=3 SV=1
Length = 217
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ + +RE V +++YS ETKKRNF ET+ELQ+GLKNYDPQ+DKRFSG++KLP PR
Sbjct: 1 MSKITTSHVRENVKELLKYSAETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPVCPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P M +C+ GDA V+ A+ G+D M V+ LKKLNKNKKL+KKL+KKY+AF+ASE +IKQ+
Sbjct: 61 PNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQV 120
Query: 121 PRLLGPGLNKAGKKVPYP 138
PRLLGP L+KAG K P P
Sbjct: 121 PRLLGPQLSKAG-KFPTP 137
>sp|Q755D9|RL10A_ASHGO 60S ribosomal protein L10a OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL10A PE=3
SV=1
Length = 217
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ + +R+ V +++YS ETKKRNF ET+ELQ+GLKNYDPQ+DKRFSG++KLP PR
Sbjct: 1 MSKITTTHVRDNVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPVCPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P M VC+ GDA V+ A+ G+D M V+ LKKLNKNKKL+KKLAKKY+AF+ASE +IKQ+
Sbjct: 61 PNMSVCIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQV 120
Query: 121 PRLLGPGLNKAGKKVPYP 138
PRLLGP L+KAG K P P
Sbjct: 121 PRLLGPQLSKAG-KFPTP 137
>sp|O14363|RL1A_SCHPO 60S ribosomal protein L1-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl1a PE=1 SV=1
Length = 216
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 115/139 (82%), Gaps = 2/139 (1%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ +R +V +I++ S+E KKRNFTET+ELQIGLKNYDPQ+DKRFSG++KLP++PR
Sbjct: 1 MSKVSPANIRSSVETILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P M +C+LGDA ++ A+ G+D M V+ LKKLNKNKKLVKKLAKKY AF+ASE +IKQI
Sbjct: 60 PNMSICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQI 119
Query: 121 PRLLGPGLNKAGKKVPYPC 139
PRLLGPGL+KAG K P P
Sbjct: 120 PRLLGPGLSKAG-KFPSPV 137
>sp|Q7ZYS8|RL10A_XENLA 60S ribosomal protein L10a OS=Xenopus laevis GN=rpl10a PE=2 SV=1
Length = 217
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/132 (70%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++Q SK+ KKR F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVLQGSKK-KKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
K +C+LGD QH +EA+ + L +MD+E LKKLNKNKKLVKKLAKKY AFLASES+IKQIP
Sbjct: 62 KFSLCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGK 133
R+LGPGLNKAGK
Sbjct: 122 RILGPGLNKAGK 133
>sp|O74836|RL1B_SCHPO 60S ribosomal protein L1-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl1b PE=1 SV=1
Length = 216
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 114/139 (82%), Gaps = 2/139 (1%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ ++R V I++ S+E KKRNFTET+ELQIGLKNYDPQ+DKRFSG++KLP++PR
Sbjct: 1 MSKVSVASVRSNVEQILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P M +C+LGDA ++ A+ G+D M V+ LKKLNKNKKLVKKLAKKY AF+ASE +IKQI
Sbjct: 60 PNMAICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQI 119
Query: 121 PRLLGPGLNKAGKKVPYPC 139
PRLLGPGL+KAG K P P
Sbjct: 120 PRLLGPGLSKAG-KFPSPV 137
>sp|Q86L05|RL10A_DICDI 60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a
PE=1 SV=1
Length = 217
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 105/134 (78%), Gaps = 2/134 (1%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ SD +R VS + + ++E+K R F ET+ELQI LKNYD +KDKRFSG +K+ + +
Sbjct: 1 MSKISSDQVRSIVSQLFKEAQESK-RGFLETVELQINLKNYDTKKDKRFSGQIKIGTVTK 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLN-KNKKLVKKLAKKYHAFLASESVIKQ 119
PK+ VC+ D QH +EA KIG ++MD+E LKK+ KNKK +KKL+KKY AFLASES+++Q
Sbjct: 60 PKLSVCVFADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQ 119
Query: 120 IPRLLGPGLNKAGK 133
+P+LLGPGLNK GK
Sbjct: 120 VPKLLGPGLNKVGK 133
>sp|Q9N4I4|RL10A_CAEEL 60S ribosomal protein L10a OS=Caenorhabditis elegans GN=rpl-10a
PE=2 SV=1
Length = 216
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 113/152 (74%), Gaps = 4/152 (2%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ ++L EA++ +++ S E K R F ETIELQIGLKNYDPQKDKRFSGS++L HIPR
Sbjct: 1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P MKVC+ GD H++EA + M + LKKLNK KKL+KKLAK Y AF+ASES+IKQI
Sbjct: 60 PNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQI 119
Query: 121 PRLLGPGLNKAGKKVPYPCYSPRIPGVQSQRD 152
PR+LGPGLNKAGK +P +QS+ D
Sbjct: 120 PRILGPGLNKAGK---FPSVVTHGESLQSKSD 148
>sp|Q6PC69|RL10A_DANRE 60S ribosomal protein L10a OS=Danio rerio GN=rpl10a PE=2 SV=1
Length = 216
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ D L EAV VQ KKR F ET+ELQI LKNYDPQKDKRFSG+V+L PR
Sbjct: 1 MSKVSRDTLYEAVKE-VQAGSRRKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
PK VC+LGD QH +EA+ L +MD+E LKKLNKNKKLVKKLAKKY AFLASES+IKQI
Sbjct: 60 PKFSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 119
Query: 121 PRLLGPGLNKAGK 133
PR+LGPGLNKAGK
Sbjct: 120 PRILGPGLNKAGK 132
>sp|Q90YV8|RL10A_ICTPU 60S ribosomal protein L10a OS=Ictalurus punctatus GN=rpl10a PE=2
SV=1
Length = 216
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ D L EAV VQ +K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PR
Sbjct: 1 MSKVSRDTLYEAVRE-VQAGSISKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
PK VC+LGD QH +EA+ + +MD+E LKKLNKNKK+VKKLAKKY AFLASES+IKQI
Sbjct: 60 PKFSVCVLGDQQHCDEAKAAEIPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQI 119
Query: 121 PRLLGPGLNKAGK 133
PR+LGPGLNKAGK
Sbjct: 120 PRILGPGLNKAGK 132
>sp|Q4R5P3|RL10A_MACFA 60S ribosomal protein L10a OS=Macaca fascicularis GN=RPL10A PE=2
SV=3
Length = 217
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/137 (66%), Positives = 109/137 (79%), Gaps = 2/137 (1%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E LKKLNKNKKLVKKLAKKY AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKKVPYP 138
R+LGPGLNKAG K P P
Sbjct: 122 RILGPGLNKAG-KFPSP 137
>sp|P62907|RL10A_RAT 60S ribosomal protein L10a OS=Rattus norvegicus GN=Rpl10a PE=1 SV=2
Length = 217
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E LKKLNKNKKLVKKLAKKY AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGK 133
R+LGPGLNKAGK
Sbjct: 122 RILGPGLNKAGK 133
>sp|P62906|RL10A_HUMAN 60S ribosomal protein L10a OS=Homo sapiens GN=RPL10A PE=1 SV=2
Length = 217
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E LKKLNKNKKLVKKLAKKY AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGK 133
R+LGPGLNKAGK
Sbjct: 122 RILGPGLNKAGK 133
>sp|Q5E9E6|RL10A_BOVIN 60S ribosomal protein L10a OS=Bos taurus GN=RPL10A PE=2 SV=3
Length = 217
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E LKKLNKNKKLVKKLAKKY AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGK 133
R+LGPGLNKAGK
Sbjct: 122 RILGPGLNKAGK 133
>sp|P53026|RL10A_MOUSE 60S ribosomal protein L10a OS=Mus musculus GN=Rpl10a PE=1 SV=3
Length = 217
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
K VC+LGD QH +E + + + +MD+E LKKLNKNKKLVKKLAKKY AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDERKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGK 133
R+LGPGLNKAGK
Sbjct: 122 RILGPGLNKAGK 133
>sp|P53027|RL10A_PIG 60S ribosomal protein L10a (Fragment) OS=Sus scrofa GN=RPL10A PE=2
SV=3
Length = 165
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRNXXKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
K VC LGD QH +EA+ + + +MD+E LKKLNKNKKLVKKLAKKY AFLASES+IKQIP
Sbjct: 62 KFSVCXLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGK 133
R+LGPGLNKAGK
Sbjct: 122 RILGPGLNKAGK 133
>sp|O15613|RL10A_ENTHI 60S ribosomal protein L10a (Fragment) OS=Entamoeba histolytica
GN=RPL10A PE=2 SV=1
Length = 165
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Query: 10 REAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLG 69
R+ V++I+ KE K+R F ET EL + LKNYDP KDKR G+ KLP++ + KVC+LG
Sbjct: 6 RQGVATIL---KEKKERKFGETGELHLALKNYDPDKDKRCGGTDKLPNVTKANYKVCVLG 62
Query: 70 DAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLN 129
DAQ E A+K + +MDV+ LK L K+K KKLA+KY+ FL S+SV +Q+ ++LGPGLN
Sbjct: 63 DAQACEAAQKENIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQKILGPGLN 122
Query: 130 KAGKKVP 136
K GK P
Sbjct: 123 KGGKFPP 129
>sp|P53028|RL10A_TRYBR 60S ribosomal protein L10a OS=Trypanosoma brucei rhodesiense
GN=RPL10A PE=2 SV=1
Length = 214
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 102/139 (73%), Gaps = 4/139 (2%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ L EA+ +++ K+ K+R F E+I+LQ+ LKNYDPQKDKRFSGSV+LPH+ R
Sbjct: 1 MSKIPPALLSEAIQNVL---KDRKERKFKESIDLQVNLKNYDPQKDKRFSGSVRLPHVCR 57
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 120
P+M VC+L D H + A+K + M+ E LKKLNKNKKLVKK+ +Y AFL SES+IK +
Sbjct: 58 PRMTVCLLCDLVHEDIAKKNDVPTMNQEELKKLNKNKKLVKKMCNQYDAFLCSESIIKTV 117
Query: 121 PRLLGPGLNKAGKKVPYPC 139
PRL+GP +++ G K P C
Sbjct: 118 PRLVGPHMHRVG-KFPTVC 135
>sp|Q9NBJ7|RL10A_CAERE 60S ribosomal protein L10a (Fragment) OS=Caenorhabditis remanei
GN=rpl-10a PE=3 SV=1
Length = 112
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 3/103 (2%)
Query: 50 SGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHA 109
SGS++L HIPRP MKVC+ GD H++EA + M + LKKLNK KKL+KKLAK Y A
Sbjct: 1 SGSIRLKHIPRPSMKVCVFGDQHHLDEAAAGNIPAMSADDLKKLNKQKKLIKKLAKSYDA 60
Query: 110 FLASESVIKQIPRLLGPGLNKAGKKVPYPCYSPRIPGVQSQRD 152
F+ASES+IKQIPR+LGPGLNKAGK +P +QS+ D
Sbjct: 61 FIASESLIKQIPRILGPGLNKAGK---FPSVVTHGESLQSKSD 100
>sp|Q5JH35|RL1_PYRKO 50S ribosomal protein L1P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl1p PE=3 SV=1
Length = 216
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 13 VSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDA 71
V ++ + K RNFT+T+E+ + LK+ D +K + RF V LPH + K+ ++ D
Sbjct: 9 VEAVKEAKARAKPRNFTQTVEMAVNLKDVDLRKPENRFKLEVVLPHGRGKEPKIAVIADG 68
Query: 72 QHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLG 125
E A+K+GLD + E L++L K+ + +KLAKKY F+A+ ++ +I R LG
Sbjct: 69 AVAEAAKKLGLDVISGEELEELAKSPRQARKLAKKYDFFIAAAPLMPKIGRYLG 122
>sp|O57782|RL1_PYRHO 50S ribosomal protein L1P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl1p PE=3 SV=1
Length = 219
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIP 59
MS++ D ++ V ++ + K RNFT+++E+ + LK+ D ++ + RF V LPH
Sbjct: 1 MSRMAFDR-QKIVEAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGR 59
Query: 60 RPKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQ 119
+K+ ++ D E A ++GLD + L+++ K+ + +KLAKKY F+A ++ +
Sbjct: 60 GKDVKIAVIADGAVAEAARRLGLDVISSAELEEIAKSPRQARKLAKKYDFFIAEAPLMPK 119
Query: 120 IPRLLG 125
I R LG
Sbjct: 120 IGRYLG 125
>sp|Q9UWR8|RL1_PYRAB 50S ribosomal protein L1P OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rpl1p PE=3 SV=1
Length = 219
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIP 59
MS++ D ++ V ++ + K RNFT+++E+ + LK+ D ++ + RF V LPH
Sbjct: 1 MSRMPFDR-QKIVEAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGR 59
Query: 60 RPKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQ 119
+K+ ++ D E A ++GLD + L+++ ++ + +KLAKKY F+A ++ +
Sbjct: 60 GKDVKIAVIADGAVAEAARRLGLDVISSAELEEIAQSPRQARKLAKKYDFFIAEAPLMPK 119
Query: 120 IPRLLG 125
I R LG
Sbjct: 120 IGRYLG 125
>sp|Q8TZJ9|RL1_PYRFU 50S ribosomal protein L1P OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rpl1p PE=1 SV=1
Length = 216
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 13 VSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDA 71
V ++ + K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D
Sbjct: 9 VKAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADG 68
Query: 72 QHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLG 125
E A K+GLD + L+++ + + +KLAKKY F+A ++ +I R LG
Sbjct: 69 AVAEAARKLGLDVISSAELEEIASSPRQARKLAKKYDFFIAEAPLMPKIGRYLG 122
>sp|P54050|RL1_METJA 50S ribosomal protein L1P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl1p PE=1 SV=2
Length = 219
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 10 REAVSSIVQYSKETKK-RNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCM 67
REA+ V+ ++E K RNFT++ E LK D +K + R V LPH + K+ +
Sbjct: 3 REALLQAVKEARELAKPRNFTQSFEFIATLKEIDMRKPENRIKTEVVLPHGRGKEAKIAV 62
Query: 68 LGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPG 127
+G ++AE++GL + E +++L KNK+ ++K+AK + F+A ++ I R +G
Sbjct: 63 IGTGDLAKQAEELGLTVIRKEEIEELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVI 122
Query: 128 LNKAGKKVPYPC 139
L G K+P P
Sbjct: 123 LGPRG-KMPKPV 133
>sp|A0RX07|RL1_CENSY 50S ribosomal protein L1P OS=Cenarchaeum symbiosum (strain A)
GN=rpl1p PE=3 SV=1
Length = 215
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 13 VSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQ 72
V+ +++ +KE KRNFT+T+E + K+ D +K + +V+LP P VC+L
Sbjct: 7 VARMIKKAKEGDKRNFTQTLEFIMVFKDIDIKKGFAINETVQLPKTSSPS-TVCVLASGD 65
Query: 73 HVEEAEKIGLDYM-DVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLNKA 131
A+ D + D +GL+KL NK+ +K +Y FLA ++ + ++LG L
Sbjct: 66 MGVRAKNAKADMVVDADGLEKLGTNKRESRKFINRYDFFLADTQLMPVVGKVLGQILGPR 125
Query: 132 GKKVPYPC 139
G K+P P
Sbjct: 126 G-KMPTPV 132
>sp|B1L6L3|RL1_KORCO 50S ribosomal protein L1P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl1p PE=3 SV=1
Length = 226
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 1 MSKL--QSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKD--KRFSGSVKLP 56
MSKL +SD+L+ + I++ S KR F E ++L + L+ D ++D + + V+LP
Sbjct: 1 MSKLLTESDSLK-VIRRILEGSP---KRRFNEAVDLVVVLRGIDLKRDPNAKINEVVELP 56
Query: 57 HIPRP-KMKVCMLGDAQHVEEAEKIGLD-YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE 114
H PR K KV ++G + + +A++ G D ++ E ++ + NK+ +KKLA +Y F+A
Sbjct: 57 HSPRNRKTKVAVIGKGEFLSKAKEAGADRVLEPEEIEAIAANKRALKKLANEYDFFIAQA 116
Query: 115 SVIKQIPRLLGPGL 128
V+ +I + +GP L
Sbjct: 117 DVLPKIVKYIGPVL 130
>sp|Q8TX51|RL1_METKA 50S ribosomal protein L1P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl1p PE=3 SV=1
Length = 214
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 4 LQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYD-PQKDKRFSGSVKLPHIPRPK 62
+ + L E + +V+YS R F ET+++ + +K D +R V LPH
Sbjct: 3 ITEEDLIEPLRKVVEYSP---PRRFLETVDMIVNVKGVDLSDPSQRIDKEVVLPHGRGKP 59
Query: 63 MKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 122
+ VC++ + + EAE+ G ++ E L++L +N + KK+A+++ F A ++ + R
Sbjct: 60 VNVCVIAEGEMAREAEEAGATVINREKLEELAENVREAKKIARRHEFFYAQVDLMPDVGR 119
Query: 123 LLGPGLNKAGK 133
+LGP L GK
Sbjct: 120 VLGPVLGPRGK 130
>sp|Q2NEW1|RL1_METST 50S ribosomal protein L1P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl1p PE=3 SV=1
Length = 212
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 6/136 (4%)
Query: 6 SDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMK 64
+ + EAV +++ E+K RNFT++I++ I + + D K + R V LP+ +K
Sbjct: 2 TQVIEEAVKKVLE---ESKPRNFTQSIDVVITINDLDINKPENRLDEEVLLPNGRGKDVK 58
Query: 65 VCMLGDAQHVEEAEKIGLDY-MDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRL 123
+ + + + +AE+ G D ++ E L++L KN+ KKLA Y F+A ++ + R
Sbjct: 59 IAFIAEGELAYQAEQAGADLVINKEKLEELGKNRPEAKKLANSYDFFVAQTDLMPTVGRF 118
Query: 124 LGPGLNKAGKKVPYPC 139
LGP L KK+P P
Sbjct: 119 LGPVLGPR-KKMPKPI 133
>sp|A7IAK4|RL1_METB6 50S ribosomal protein L1P OS=Methanoregula boonei (strain 6A8)
GN=rpl1p PE=3 SV=1
Length = 214
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 11 EAVSSIVQYSKETKKRNFTETIELQIGLKNYD-PQKDKRFSGSVKLPHIPRPKMKVCMLG 69
EAV++ ++ + KR F+E+I++ I LKN D Q R ++ LP+ K +C++G
Sbjct: 9 EAVTTAIEKAP---KRKFSESIDITINLKNIDMAQPKNRIDETILLPNGTGEKTGICVIG 65
Query: 70 DAQHVEEAEKIGLDY-MDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGL 128
V +A+ +D + + +++L + +++A Y FLA +V+ Q+ R LGP L
Sbjct: 66 RGDIVTQAKDAKVDLILGPDEVERLGGAPREARRVASSYKYFLAETAVMPQVGRFLGPRL 125
Query: 129 NKAGKKVPYPCYSPRIPG 146
G ++P P IPG
Sbjct: 126 GPRG-RMPMP-----IPG 137
>sp|O27716|RL1_METTH 50S ribosomal protein L1P OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rpl1p PE=3 SV=2
Length = 212
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 9 LREAVSSIVQYSKE-TKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVC 66
+++ + V+ +KE ++ RNFT+++++ + +K+ D K + RF V LP+ +K+
Sbjct: 1 MQQEIMEAVKKAKELSRPRNFTQSMDVILNIKDLDVNKPENRFDEEVSLPNGRGKDVKIA 60
Query: 67 MLGDAQHVEEAEKIGLDYMDV-EGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLG 125
++ D + +A+ G D + + L++L KN+K KKLA +Y F+A ++ + R +G
Sbjct: 61 VIADGELALQAKNAGADLVITKDELEELGKNRKEAKKLANQYEFFVAQADMMPLVGRFMG 120
Query: 126 PGLNKAGKKVPYPC 139
P L KK+P P
Sbjct: 121 PVLG-PRKKMPKPV 133
>sp|O28782|RL1_ARCFU 50S ribosomal protein L1P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl1p PE=3 SV=1
Length = 215
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 13 VSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPH-IPRPKMKVCMLGD 70
V SI + K KKR F ET+E+ + L+N D +K + R V LPH + +P+ K+ +
Sbjct: 9 VKSIEEAIKNGKKRRFVETVEMAVNLRNVDMKKPENRIDTVVNLPHGLGKPR-KIGVFAK 67
Query: 71 AQHVEEAEKIGLDYMDV-EGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLN 129
+A++ G D + E + +L K+K+ KKLA F+A ++ +I R LGP L
Sbjct: 68 GDTALKAKEAGADVVITPEEIDELAKDKRRAKKLANSIDFFIAEAPLMPEIGRKLGPVLG 127
Query: 130 KAGKKVPYPC 139
G K+P P
Sbjct: 128 PRG-KIPQPI 136
>sp|O52704|RL1_METTL 50S ribosomal protein L1P OS=Methanococcus thermolithotrophicus
GN=rpl1p PE=1 SV=1
Length = 213
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 10 REAVSSIVQYSKE-TKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCM 67
RE + V+ ++ K RNFT++++L I LK D + + R V LP+ + K+ +
Sbjct: 3 RENILKAVKEARSLAKPRNFTQSLDLIINLKELDLSRPENRLKEQVVLPNGRGKEPKIAV 62
Query: 68 LGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPG 127
+ +AE++GL + + L++L KNKK+ KK+A ++ F+A ++ + + LGP
Sbjct: 63 IAKGDLAAQAEEMGLTVIRQDELEELGKNKKMAKKIANEHDFFIAQADMMPLVGKTLGPV 122
Query: 128 LNKAGKK-VPYPCYSPRIPGVQ 148
L GK P P + P V+
Sbjct: 123 LGPRGKMPQPVPANANLTPLVE 144
>sp|Q2FQ32|RL1_METHJ 50S ribosomal protein L1P OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rpl1p PE=3 SV=1
Length = 215
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 10/135 (7%)
Query: 7 DALREAVSSIVQYSKETKKRNFTETIELQIGLKNYD-PQKDKRFSGSVKLPHIPRPKMKV 65
DAL++A ++ +R FTE++++ I LKN D Q R ++ LPH +K+
Sbjct: 9 DALKKA-------KEQAPERKFTESVDMTINLKNIDMSQPKNRIDETILLPHGNGRVVKI 61
Query: 66 CMLGDAQHVEEAEKIGLDY-MDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLL 124
+LG V +A + G++ M E +++L + +K+A ++ FLA V+ + R L
Sbjct: 62 AVLGSGDIVTQARESGVELIMGPEEIERLGGAPREARKIASEHQFFLAETQVMSLVGRWL 121
Query: 125 GPGLNKAGKKVPYPC 139
GP L G ++P P
Sbjct: 122 GPRLGPRG-RMPQPI 135
>sp|Q9Y9W6|RL1_AERPE 50S ribosomal protein L1P OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl1p PE=3
SV=2
Length = 217
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 5 QSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYD---PQKDKRFSGSVKLPHIPRP 61
Q L +I + K + + F +++E+ + LK+ D PQ R +V LP+ P
Sbjct: 3 QETVLASIEEAIDKSLKLGRGKRFKQSVEIIVALKDIDLKSPQA--RIRETVFLPNRPPK 60
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 121
+ KVC++ +A++ G++ ++ + L+ L++NK+ VKKLA++ + L ++
Sbjct: 61 EAKVCVVAHGDMELQAKEAGVEVLNRQDLQNLSQNKREVKKLARRCYWVLVRADLMGLAG 120
Query: 122 RLLGPGLNKAGKK-VPYP 138
R+LGP L GK VP P
Sbjct: 121 RILGPALGPRGKAPVPVP 138
>sp|A2BN64|RL1_HYPBU 50S ribosomal protein L1P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl1p PE=3 SV=1
Length = 217
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 10 REAVSSIVQYSKE-TKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCM 67
REAV V+ + E + KRNF ++++L + L++ D + + R V LPH P+ +++C+
Sbjct: 6 REAVEQAVKEALEISPKRNFKQSVDLIVVLRDIDLRSPQGRIREVVILPHPPKKHVRICV 65
Query: 68 LGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPG 127
D +A+++ + E L+ L N+K KK+A+ + ++ + R L P
Sbjct: 66 AADGDMAVKAKEVADRVLTREELQGLVGNRKAAKKIAEFCDWVIVKADLMPLVGRTLAPA 125
Query: 128 LNKAGKKVPYP 138
L G KVP P
Sbjct: 126 LGPRG-KVPIP 135
>sp|Q971J1|RL1_SULTO 50S ribosomal protein L1P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl1p PE=3 SV=2
Length = 219
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 7 DALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKV 65
D+L EA+ + + KRNFT+++EL + K D +K + + V LP P KV
Sbjct: 6 DSLVEALK-VALNPENNPKRNFTQSVELIVTFKGIDMKKGELKLREIVPLPKEPSKPRKV 64
Query: 66 CMLGDAQHVEEAEKIGLDYMDV-EGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLL 124
++ Q +E A+K + + E L+KL K+ +KKLA++ FL ++ + + R+L
Sbjct: 65 LVIPAFQQIESAKKAEPNVLLTKEELQKLQGQKRAIKKLARQNDWFLVAQDSMALVGRIL 124
Query: 125 GPGLNKAGKKVPYPC 139
GP L G K P P
Sbjct: 125 GPALGPRG-KFPTPL 138
>sp|A0B922|RL1_METTP 50S ribosomal protein L1P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl1p PE=3 SV=1
Length = 212
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 7 DALREAVSSIVQYSKETKKRNFTETIELQIGLKNYD-PQKDKRFSGSVKLPHIPRPKMKV 65
+A+++AVS E R F E+++L I L N D Q R V LPH ++
Sbjct: 7 EAVKKAVS-------EAPPRGFKESVDLAINLHNIDLTQPGNRVDTEVILPHGRGRPNRI 59
Query: 66 CMLGDAQHVEEAEKIGLDY-MDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLL 124
+ +A+ G DY + E LK L +N+K +KLA +Y F+A + I + L
Sbjct: 60 AVFAAGDTALKAKAAGADYVISPEELKLLGENRKNARKLADEYDFFIAETQFMPVIGKTL 119
Query: 125 GPGLNKAGKKVPYPC 139
GP L K G K+P P
Sbjct: 120 GPILGKRG-KMPTPL 133
>sp|A4FZS7|RL1_METM5 50S ribosomal protein L1P OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rpl1p PE=3 SV=1
Length = 213
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 23 TKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIG 81
K RNFT++++L + LK D + + R + LP + + ++ +AE++G
Sbjct: 17 AKPRNFTQSVDLIVNLKELDLSRPENRLKEQIVLPSGRGKDVAIAVIAKGDLAAQAEEMG 76
Query: 82 LDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLNKAGKKVPYPC 139
L + E L++L KNKK KK+A + F+A ++ + + LGP L G K+P P
Sbjct: 77 LTVIRQEELEELGKNKKTAKKIANAHGFFIAQADMMPLVGKSLGPVLGPRG-KMPQPV 133
>sp|Q0W050|RL1_UNCMA 50S ribosomal protein L1P OS=Uncultured methanogenic archaeon RC-I
GN=rpl1p PE=3 SV=1
Length = 213
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 8 ALREAVSSIVQYSKETKKRNFTETIELQIGLKNYD-PQKDKRFSGSVKLPHIPRPKMKVC 66
A +E V ++ + KRNF+E+++L I LKN D Q R + LP +KV
Sbjct: 2 ARKETVEAVKKALASRPKRNFSESVDLAINLKNIDMSQPKNRVDEDIILPSGLGKTIKVA 61
Query: 67 MLGDAQHVEEAEKIGLDYM-DVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLG 125
+ + AEK G DY+ E ++KL +K KKLA + + F+A + + I + LG
Sbjct: 62 VFAKGEVAVNAEKAGADYVFPPEEIEKLGADKPRAKKLASEVNFFIAETAYMPTIGKRLG 121
Query: 126 PGLNKAGKKVPYPC 139
L G K+P P
Sbjct: 122 TVLGPRG-KMPAPL 134
>sp|A1RRR1|RL1_PYRIL 50S ribosomal protein L1P OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rpl1p PE=3 SV=1
Length = 222
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 13 VSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDA 71
+S I + + K R F +++EL + L++ D K + R + V+LPH P+P KV
Sbjct: 11 LSKIKEALRNGKPRRFRQSVELIVVLRDVDLNKPENRINLLVELPHPPKPN-KVAAFAHG 69
Query: 72 QHVEEAEKIGLDYMDV-EGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLNK 130
+A+ G+D + + ++ L NK+ ++KLAK+Y F+A ++ + R++GP
Sbjct: 70 AFETQAKNAGVDAIITRDQIESLAGNKRAIRKLAKQYDFFIAPPDLMPLLGRVIGPIFGP 129
Query: 131 AGK 133
GK
Sbjct: 130 RGK 132
>sp|Q6M0L0|RL1_METMP 50S ribosomal protein L1P OS=Methanococcus maripaludis (strain S2 /
LL) GN=rpl1p PE=3 SV=1
Length = 213
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 23 TKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIG 81
K RNFT++++L + LK D + + R + LP + + ++ +AE +G
Sbjct: 17 AKPRNFTQSVDLIVNLKELDLSRPENRLKEQIVLPSGRGKDVAIAVIAKGDLAAQAEDMG 76
Query: 82 LDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLNKAGKKVPYPC 139
L + E L++L KNKK KK+A + F+A ++ + + LGP L G K+P P
Sbjct: 77 LTVIRQEELEELGKNKKTAKKIANAHGFFIAQADMMPLVGKSLGPVLGPRG-KMPQPV 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,252,955
Number of Sequences: 539616
Number of extensions: 2213963
Number of successful extensions: 6892
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 6170
Number of HSP's gapped (non-prelim): 797
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)