BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031805
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum
GN=elmoA PE=1 SV=1
Length = 977
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 27/164 (16%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT 60
MG+QG DP TDFR G L+NL+Y A+N+ + F+ ++ Q DR EYP A AG+ +T
Sbjct: 412 MGFQGTDPCTDFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLT 470
Query: 61 FML---IQMLDLEAVKPRTMVGAT---------------FLKFLSENESAFDLLYCITFK 102
F L I + + P + F + AF+ +YC TF+
Sbjct: 471 FELYNSIFKMGTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQ 530
Query: 103 LMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS 146
++D W M +YM F +M S + + +T LE P+
Sbjct: 531 ILDSTWDDMNGTYMHFQKIMSSVKNLI--------ITALESKPT 566
>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum
GN=elmoC PE=4 SV=1
Length = 618
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 2 GWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT- 60
G+Q DP+ DFRG G + L NL++L ++ Q++L + DR +YPFAVAG+NI+
Sbjct: 411 GFQSDDPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISN 464
Query: 61 --FMLIQMLDLEAVKPRTMVG------ATFLKFLSENESAFDLLYCITFKLMDHQWLAMR 112
F + Q+ + +P A N+ AF+ LY + F L+DH W+ M
Sbjct: 465 LIFEVFQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMN 524
Query: 113 ASYMDFNTVMKSTRRQL 129
A+YM F V+K + QL
Sbjct: 525 ATYMMFPLVIKKLKSQL 541
>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3
PE=2 SV=3
Length = 720
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 1 MGWQGKDPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVN 58
+G+ +P+ D G ++L+N+LY +RN P ++ + + E PFA +
Sbjct: 347 LGFSNSNPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARGSIQ 406
Query: 59 ITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 118
+T +L ++L + +P + F + +F L+C+ +L++ W MRA+ DF
Sbjct: 407 LTVLLCELLRVG--EPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDF 464
Query: 119 NTVMKSTRRQLERELLLEDVT 139
+ VM+ R QL R L L+ +
Sbjct: 465 DKVMQVVREQLARTLALKPTS 485
>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus
GN=Elmo3 PE=2 SV=1
Length = 720
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 1 MGWQGKDPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVN 58
+G+ P+ D G ++L+N+LY +R+ P ++ + + E PFA + +
Sbjct: 347 LGFSNSSPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQ 406
Query: 59 ITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 118
+T +L ++L + +P + F + +F L+C+ +L++ W MRA+ DF
Sbjct: 407 LTVLLCELLHVG--EPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDF 464
Query: 119 NTVMKSTRRQLERELLLEDVT 139
+ VM+ R QL R L L+ +
Sbjct: 465 DKVMQVVREQLARTLALKPTS 485
>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D
OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1
Length = 1267
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 15/130 (11%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT 60
+G+Q KDPS+DFRG G L++L+YLA+N F + L ++ + + YP+A +G+ +T
Sbjct: 335 IGFQNKDPSSDFRGMGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY--YPYATSGIQVT 392
Query: 61 FMLIQMLDLEAVKP-------RTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA 113
L+ E VKP ++G + L E+E+A + +YC+ ++ W A
Sbjct: 393 SFLV-----ECVKPINISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNA 446
Query: 114 SYMDFNTVMK 123
+YM F V +
Sbjct: 447 TYMIFQKVFQ 456
>sp|Q8BYZ7|ELMO3_MOUSE Engulfment and cell motility protein 3 OS=Mus musculus GN=Elmo3
PE=1 SV=2
Length = 720
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 1 MGWQGKDPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVN 58
+G+ +P+ D G ++L+N+LY +R+ P ++ + + E PFA + +
Sbjct: 347 LGFSNSNPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQ 406
Query: 59 ITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 118
+T +L ++L + +P + F + +F L+C+ +L++ W MRA+ DF
Sbjct: 407 LTALLCELLRVG--EPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDF 464
Query: 119 NTVMKSTRRQLERELLLEDVT 139
+ VM+ R QL R L L+ +
Sbjct: 465 DKVMQVVREQLARTLALKPTS 485
>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2
SV=1
Length = 652
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 1 MGWQGKDPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVN 58
+G+ +P+ D G ++L+N+LY +R P ++ + + E PFA + +
Sbjct: 347 LGFSNSNPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPFARSSIQ 406
Query: 59 ITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 118
+T +L +L + +P + F + +F L+C++ +L++ W MRA+ DF
Sbjct: 407 LTVLLCDLLHVG--EPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQEDF 464
Query: 119 NTVMKSTRRQLERELLLE 136
+ VM+ R QL R L L+
Sbjct: 465 DKVMQVVREQLARTLALK 482
>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum
GN=elmoB PE=4 SV=1
Length = 284
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 21/129 (16%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT 60
+G+QG DP+TDFRG G + L+NL+Y + + +++L+ S YPFA+ G+NIT
Sbjct: 153 LGFQGMDPATDFRGMGILGLDNLIYFSTQHSEDAREILK---NSNSKCCYPFAITGINIT 209
Query: 61 FMLIQMLDLEAVKPRTMV-----GATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-S 114
+++ ++D KP + G+T +F NE LY + F D + + + S
Sbjct: 210 ALVLNLID----KPHFKIYFFKNGSTLTQF---NE-----LYSLVFISFDRFYQSKKPKS 257
Query: 115 YMDFNTVMK 123
M+FNT+ K
Sbjct: 258 IMEFNTIKK 266
>sp|Q92556|ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1
PE=1 SV=2
Length = 727
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 7 DPSTDFRGG--GFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 64
+P+ DF G ++L+N+LY A++ ++ ++ + E PF + + +T ML
Sbjct: 366 NPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLC 425
Query: 65 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 124
++L + + T F ++ +F+ +CI +L++ W MRA+ DFN VM+
Sbjct: 426 EILKVGELPSETC--NDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQV 483
Query: 125 TRRQLEREL 133
+ Q+ R L
Sbjct: 484 VKEQVMRAL 492
>sp|Q8BPU7|ELMO1_MOUSE Engulfment and cell motility protein 1 OS=Mus musculus GN=Elmo1
PE=1 SV=2
Length = 727
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 7 DPSTDFRGG--GFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 64
+P+ DF G ++L+N+LY A++ ++ ++ + E PF + + +T ML
Sbjct: 366 NPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLC 425
Query: 65 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 124
++L + + T F ++ +F+ +CI +L++ W MRA+ DFN VM+
Sbjct: 426 EILKVGELPSETC--NDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQV 483
Query: 125 TRRQLEREL 133
+ Q+ R L
Sbjct: 484 VKEQVMRAL 492
>sp|A4FUD6|ELMO2_BOVIN Engulfment and cell motility protein 2 OS=Bos taurus GN=ELMO2 PE=2
SV=1
Length = 720
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 7 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 64
+P+ DF G ++L+N+LYLA+ ++ ++ + E PF + + +T ML
Sbjct: 359 NPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSREDKHECPFGRSAIELTKMLC 418
Query: 65 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 124
++L + + P F + ++ AF+ L+ I +L++ W MRA+ DFN VM+
Sbjct: 419 EILQVGEL-PNEGRNDYHPMFFT-HDRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQV 476
Query: 125 TRRQLEREL 133
R Q+ R L
Sbjct: 477 VREQITRAL 485
>sp|Q5RCC1|ELMO2_PONAB Engulfment and cell motility protein 2 OS=Pongo abelii GN=ELMO2
PE=2 SV=1
Length = 720
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 7 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 64
+P+ DF G ++L+N+LYLA+ ++ ++ + E PF + + +T ML
Sbjct: 359 NPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSREDKHECPFGRSAIELTKMLC 418
Query: 65 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 124
++L + + P F + ++ AF+ L+ I +L++ W MRA+ DFN VM+
Sbjct: 419 EILQVGEL-PNEGRNDYHPMFFT-HDRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQV 476
Query: 125 TRRQLEREL 133
R Q+ R L
Sbjct: 477 VREQITRAL 485
>sp|Q96JJ3|ELMO2_HUMAN Engulfment and cell motility protein 2 OS=Homo sapiens GN=ELMO2
PE=1 SV=2
Length = 720
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 7 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 64
+P+ DF G ++L+N+LYLA+ ++ ++ + E PF + + +T ML
Sbjct: 359 NPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSREDKHECPFGRSAIELTKMLC 418
Query: 65 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 124
++L + + P F + ++ AF+ L+ I +L++ W MRA+ DFN VM+
Sbjct: 419 EILQVGEL-PNEGRNDYHPMFFT-HDRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQV 476
Query: 125 TRRQLEREL 133
R Q+ R L
Sbjct: 477 VREQITRAL 485
>sp|Q8BHL5|ELMO2_MOUSE Engulfment and cell motility protein 2 OS=Mus musculus GN=Elmo2
PE=1 SV=1
Length = 732
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 7 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 64
+P+ DF G ++L+N+LYLA+ ++ ++ + E PF + + +T ML
Sbjct: 371 NPALDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSREDKHECPFGRSAIELTKMLC 430
Query: 65 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 124
++L + + P F + ++ AF+ L+ I +L++ W MRA+ DFN VM+
Sbjct: 431 EILQVGEL-PNEGRNDYHPMFFT-HDRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQV 488
Query: 125 TRRQLEREL 133
R Q+ R L
Sbjct: 489 VREQITRAL 497
>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1
Length = 293
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT 60
+G+QG DP TDFRG G + L NL+Y + N+ +L + + Y +A+ G+N+T
Sbjct: 155 IGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSR--SNHPKLGYSYAIVGINLT 212
Query: 61 FMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 119
M +L EA+K F+ + E F YC D W + S M FN
Sbjct: 213 EMAYSLLKSEALKFHLY---NFVPGIPTMEH-FHQFYCYLVYEFDKFWFEEKPESIMYFN 268
Query: 120 TVMKSTRRQLERELLLEDVT 139
+ +++ LL +V+
Sbjct: 269 VYREKFHEKIKGLLLDCNVS 288
>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2
SV=1
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT 60
+G+QG DP TDFRG G + L NL+Y + N+ +L + + Y +A+ G+N+T
Sbjct: 155 IGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSR--SNHPKLGYSYAIVGINLT 212
Query: 61 FMLIQMLDLEAVK 73
M +L EA+K
Sbjct: 213 EMAYSLLKSEALK 225
>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1
SV=1
Length = 293
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT 60
+G+QG DP TDFRG G + L NL+Y + N+ +L + + Y +A+ G+N+T
Sbjct: 155 IGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSR--SNHPKLGYSYAIVGINLT 212
Query: 61 FMLIQMLDLEAVK 73
M +L EA+K
Sbjct: 213 EMAYSLLKSEALK 225
>sp|Q0IIE6|ELMD1_BOVIN ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1
Length = 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLL------RKQEGDRSVWE----- 49
+G+QG DP TDFRG G + L NL Y A + Q +L + + ++ WE
Sbjct: 162 IGFQGDDPKTDFRGMGLLGLYNLQYFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMD 221
Query: 50 ----YPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMD 105
Y FA+ G+NIT + +L A+K A LS F +C
Sbjct: 222 KAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFH 277
Query: 106 HQWLAMRA-SYMDFNTVMKSTRRQLERELLLEDVT 139
W+ M+FN V + R+++ ++L D+
Sbjct: 278 KFWIEEDPMDIMEFNRVREKFRKRIIKQLQNPDMA 312
>sp|Q5NVD7|ELMD1_PONAB ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2
SV=1
Length = 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLL------RKQEGDRSVWE----- 49
+G+QG DP TDFRG G + L NL Y A + Q +L + + ++ WE
Sbjct: 162 IGFQGDDPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMD 221
Query: 50 ----YPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMD 105
Y FA+ G+NIT + +L A+K A LS F +C
Sbjct: 222 KAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFH 277
Query: 106 HQWLAMRA-SYMDFNTVMKSTRRQLERELLLEDVT 139
W+ M+FN V + R+++ ++L D+
Sbjct: 278 KFWIEEDPMDIMEFNRVREKFRKRIIKQLQNPDMA 312
>sp|Q3V1U8|ELMD1_MOUSE ELMO domain-containing protein 1 OS=Mus musculus GN=Elmod1 PE=2
SV=2
Length = 326
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLL----------------RKQEGD 44
+G+QG DP TDFRG G + L NL Y A Q +L K++ D
Sbjct: 162 IGFQGDDPKTDFRGMGLLGLYNLQYFAERDATVAQQVLSDSVHPKCSKFSKIEWEKKKMD 221
Query: 45 RSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLM 104
+++ Y FA+ G+NIT + +L A+K A LS F +C
Sbjct: 222 KAIG-YSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSH----FQQTFCYLMHEF 276
Query: 105 DHQWLAMRA-SYMDFNTVMKSTRRQLERELLLEDVT 139
W+ M+FN V + R+++ ++L D+
Sbjct: 277 HKFWIEEDPMDIMEFNRVREKFRKRIIKQLQNPDMA 312
>sp|Q8N336|ELMD1_HUMAN ELMO domain-containing protein 1 OS=Homo sapiens GN=ELMOD1 PE=2
SV=3
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 28/163 (17%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLR-----------KQEG---DRS 46
+G+QG DP TDFRG G + L NL Y A + Q +L K+E ++
Sbjct: 162 IGFQGDDPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKA 221
Query: 47 VWE---------YPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLY 97
WE Y FA+ G+NIT + +L A+K A LS F +
Sbjct: 222 EWEKKRMDKAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSH----FQQTF 277
Query: 98 CITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQLERELLLEDVT 139
C W+ M+FN V + R+++ ++L D+
Sbjct: 278 CYLMHEFHKFWIEEDPMDIMEFNRVREKFRKRIIKQLQNPDMA 320
>sp|Q96FG2|ELMD3_HUMAN ELMO domain-containing protein 3 OS=Homo sapiens GN=ELMOD3 PE=2
SV=2
Length = 381
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYL---ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGV 57
+G+QG +P+TD RG GF++L +LLYL ++ P + Q++ R + ++PF + V
Sbjct: 199 LGFQGANPATDLRGAGFLALLHLLYLVMDSKTLPMA-QEIFRLSR--HHIQQFPFCLMSV 255
Query: 58 NITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 117
NIT + IQ L E + + ++ Y TF + H W R + D
Sbjct: 256 NITHIAIQALREECLSRECNRQQKVIPVVNS-------FYAATFLHLAHVWRTQRKTISD 308
Query: 118 FNTVMK 123
V+K
Sbjct: 309 SGFVLK 314
>sp|Q58DT5|ELMD3_BOVIN ELMO domain-containing protein 3 OS=Bos taurus GN=ELMOD3 PE=2 SV=1
Length = 381
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 25/132 (18%)
Query: 1 MGWQGKDPSTDFRGGGFISL---------ENLLYLARNFPKSFQDLLRKQEGDRSVWEYP 51
+G+QG +P+TD RG GF++L L +AR ++LR + ++P
Sbjct: 199 LGFQGTNPATDLRGAGFLALLHLLYLVMDSKTLLMAR-------EILRLSR--HHIQQFP 249
Query: 52 FAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAM 111
F + VNIT + IQ L E + + ++ Y TF + H W
Sbjct: 250 FCLMSVNITRIAIQALREECLSRECNRQQKVIPVVNS-------FYAATFLRLAHIWRTQ 302
Query: 112 RASYMDFNTVMK 123
+ D V+K
Sbjct: 303 HKTISDSGFVLK 314
>sp|Q91YP6|ELMD3_MOUSE ELMO domain-containing protein 3 OS=Mus musculus GN=Elmod3 PE=2
SV=1
Length = 381
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF---QDLLRKQEGDRSVWEYPFAVAGV 57
+G+QG +P+TD RG GF++L +LLYL + K+F Q++ R + ++PF + V
Sbjct: 199 LGFQGANPATDLRGAGFLALLHLLYLVMD-SKTFLMAQEIFRLSH--HHIQQFPFCLMSV 255
Query: 58 NITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 117
NIT + IQ L E + + ++ Y TF + W + + +D
Sbjct: 256 NITRIAIQALREECLSRECNRRQKVIPVVNS-------FYAATFLHLARVWRTQQKTILD 308
Query: 118 FNTVMK 123
V+K
Sbjct: 309 SGFVLK 314
>sp|Q09292|ELMD3_CAEEL ELMO domain-containing protein C56G7.3 OS=Caenorhabditis elegans
GN=C56G7.3 PE=4 SV=2
Length = 322
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQD---LLRKQEGDRSVWEYPFAVAGV 57
+G+Q P TDFRG G + L + + P + LL E + ++P AV +
Sbjct: 179 VGFQSATPHTDFRGCGVLGLLQMHTFTQRVPANLLRAIVLLATTEPN----DFPLAVVSI 234
Query: 58 NITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 117
NIT +L+ L A+ F S ++ +C +K + + + +
Sbjct: 235 NITSILLTQLKKGALDNFGNEIEGLYPFFSALHASAMCRFCSIYK-------SQKCTLAN 287
Query: 118 FNTVMKSTRRQLERELL 134
T+ RQLE+ L
Sbjct: 288 TQTIFSEITRQLEKSPL 304
>sp|Q5XIQ2|ELMD3_RAT ELMO domain-containing protein 3 OS=Rattus norvegicus GN=Elmod3
PE=2 SV=1
Length = 356
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQE----GDRSVWEYPFAVAG 56
+G+QG +P+TD RG GF++L +LLYL + + LL QE + ++PF +
Sbjct: 199 LGFQGANPATDLRGTGFLALLHLLYLVMD----SKTLLMAQEILRLSHHHIQQFPFCLMS 254
Query: 57 VNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYM 116
VNIT + IQ L E + + ++ Y TF + W + +
Sbjct: 255 VNITRIAIQALREECLSRECNRRRKVIPVVNS-------FYAATFLHLARMWRTQHNTIL 307
Query: 117 DFNTVMK 123
D V+K
Sbjct: 308 DSGFVLK 314
>sp|Q54WH5|ELMOE_DICDI ELMO domain-containing protein E OS=Dictyostelium discoideum
GN=elmoE PE=4 SV=1
Length = 1677
Score = 37.4 bits (85), Expect = 0.039, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 50 YPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWL 109
YP A +++T+ L + + + + + ++ + FD ++ TF L + W
Sbjct: 628 YPLATVAISLTYTLSNIFRIGRIND-SPIDSSIWDIAFSGSNWFDEIFVTTFNLFESLWH 686
Query: 110 AMRASYMDFNTVMKSTRRQLER 131
+ SY DF V+ TR +E+
Sbjct: 687 SEAHSYSDFPQVISHTREIIEK 708
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 1 MGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQ 41
+G++ +P DF+ G ++L NL Y ++ + FQ LL Q
Sbjct: 521 LGFRSSNPMEDFKNTGVLALRNLSYFSKQHLQPFQSLLLTQ 561
>sp|Q9UF56|FXL17_HUMAN F-box/LRR-repeat protein 17 OS=Homo sapiens GN=FBXL17 PE=2 SV=3
Length = 701
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 52 FAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAM 111
+A+ + M I+ +D+ K T GAT + S++ L+ C + + L
Sbjct: 607 YALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQ 666
Query: 112 RASYMDFNTVMKSTRRQLER 131
+ ++ F+TV++ +R LER
Sbjct: 667 QYPHITFSTVLQDCKRTLER 686
>sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F OS=Dictyostelium discoideum
GN=elmoF PE=4 SV=1
Length = 1185
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 50 YPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWL 109
Y F+ G +T ++ ++ + + + + + F+ L+CI+F+L D W
Sbjct: 414 YSFSRVGFTLTNLIFELY---------IEDENLYEIIFDQDDWFEELFCISFELFDEIWE 464
Query: 110 AMRASYMDFNTVMKSTRRQLER 131
D+ V+ TR L R
Sbjct: 465 REGTCQEDYIPVLHKTRAVLSR 486
>sp|Q9QZN1|FXL17_MOUSE F-box/LRR-repeat protein 17 OS=Mus musculus GN=Fbxl17 PE=2 SV=3
Length = 701
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 52 FAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAM 111
+A+ + + I+ +D+ K T GAT + S++ L+ C + + L
Sbjct: 607 YALIAIGRYSVTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNELTVEQLVQ 666
Query: 112 RASYMDFNTVMKSTRRQLER 131
+ ++ F+TV++ +R LER
Sbjct: 667 QYPHITFSTVLQDCKRTLER 686
>sp|Q10276|KICH_SCHPO Putative choline kinase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC13G7.12c PE=3 SV=1
Length = 456
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 73 KPRTMVGATFLKFLSENESAFDLL-----YCITFKLMDHQWLAMRASYMDFNTVMKSTRR 127
K RT+V F ++ N AFDL + + H +L R+ Y DFN
Sbjct: 265 KHRTLVPVDF-EYAGPNLCAFDLANYFAEWMADYHHPTHNYLMDRSRYPDFNARKLVYHA 323
Query: 128 QLERELLLEDVTRLED 143
+E+ ++ D+ +ED
Sbjct: 324 YVEQSAVINDLLEIED 339
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,099,157
Number of Sequences: 539616
Number of extensions: 1839412
Number of successful extensions: 4835
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4777
Number of HSP's gapped (non-prelim): 35
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)