BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031809
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D7STK2|GATC_VITVI Glutamyl-tRNA(Gln) amidotransferase subunit C,
chloroplastic/mitochondrial OS=Vitis vinifera GN=GATC
PE=3 SV=1
Length = 137
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 114/152 (75%), Gaps = 15/152 (9%)
Query: 1 MGSRGLLLLKGAAPKHHIFNNTKGSIFSSKMPTRYYYYDYDYNNRTRNCSTTTTRSSLEP 60
MGSR LLLLK + +F T S FS + N TR+ ST RS+L P
Sbjct: 1 MGSRALLLLKATTAETLLF--TSKSTFSKAL----------IRNSTRSFST---RSALLP 45
Query: 61 PDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLRED 120
PD+PRLA+TARISLTPHEVEEFAPKIRQVIDWFGQLQ VDL S++P++RAD+E LR+D
Sbjct: 46 PDLPRLAETARISLTPHEVEEFAPKIRQVIDWFGQLQAVDLQSIEPSIRADTEGDNLRDD 105
Query: 121 IPKTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
P+TF+NRE++IAA+PSY+EPY+KVPKVLNK+
Sbjct: 106 SPETFENREAIIAAIPSYEEPYLKVPKVLNKD 137
>sp|B9RRX2|GATC_RICCO Glutamyl-tRNA(Gln) amidotransferase subunit C,
chloroplastic/mitochondrial OS=Ricinus communis GN=GATC
PE=3 SV=1
Length = 143
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 89/101 (88%)
Query: 52 TTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRAD 111
T SSL+PPDV RLA+TARISL +EVEEFAPKIRQVIDWFGQLQ VDL+SV+PA+RAD
Sbjct: 43 ATNGSSLQPPDVSRLAETARISLNQNEVEEFAPKIRQVIDWFGQLQAVDLNSVEPAIRAD 102
Query: 112 SETGYLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
SE LR+D+P+TF RE++IAAVPSY++PY+KVPKVLNKE
Sbjct: 103 SEGENLRDDVPETFSEREAIIAAVPSYEKPYVKVPKVLNKE 143
>sp|B9INH0|GATC_POPTR Glutamyl-tRNA(Gln) amidotransferase subunit C,
chloroplastic/mitochondrial OS=Populus trichocarpa
GN=GATC PE=3 SV=1
Length = 141
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 105/156 (67%), Gaps = 19/156 (12%)
Query: 1 MGSRGLLLLKGAAPKHH----IFNNTKGSIFSSKMPTRYYYYDYDYNNRTRNCSTTTTRS 56
MGSR +LLLKG +P H + N+ K S S R T S
Sbjct: 1 MGSRAVLLLKGPSPPKHSILFLLNHKKISPAPSI--------------RRFTTKATANGS 46
Query: 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGY 116
SLEPPDV RLA+TARISLTP +VEEF PKIRQVIDW L VDLDSV+P++RAD+E
Sbjct: 47 SLEPPDVARLAETARISLTPQQVEEFGPKIRQVIDWHALLS-VDLDSVEPSIRADTEGDN 105
Query: 117 LREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
LR D P+TF+NRE++IAAVP+Y++PY+KVPKVLNKE
Sbjct: 106 LRHDNPETFENREAIIAAVPNYEDPYVKVPKVLNKE 141
>sp|F4JV80|GATC_ARATH Glutamyl-tRNA(Gln) amidotransferase subunit C,
chloroplastic/mitochondrial OS=Arabidopsis thaliana
GN=GATC PE=2 SV=1
Length = 155
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 109/155 (70%), Gaps = 3/155 (1%)
Query: 1 MGSRGLLLLKGAAPKHHIFNNTKGSIFSSKMPTRYYYYDYDY--NNR-TRNCSTTTTRSS 57
M +R LL + A+P + ++ I S + +YY N+R R+ S+ + S
Sbjct: 1 MATRALLAVIYASPNRCYISPSRIKIQSLTCSSSSHYYQRQSRKNHRIARSYSSDSDSSV 60
Query: 58 LEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYL 117
L+PPDV RLAQTARISLTP E+EE KIR+VIDWFGQLQ VD++SV+PA+RA+ + G L
Sbjct: 61 LQPPDVARLAQTARISLTPAEIEECETKIRRVIDWFGQLQQVDVNSVEPAIRAEMDGGNL 120
Query: 118 REDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
RED P+TF NR+S+ A++PS+++ Y+KVPK+LNKE
Sbjct: 121 REDAPETFDNRDSIRASIPSFEDAYLKVPKILNKE 155
>sp|Q7XZZ1|GATC_ORYSJ Glutamyl-tRNA(Gln) amidotransferase subunit C,
chloroplastic/mitochondrial OS=Oryza sativa subsp.
japonica GN=GATC PE=2 SV=1
Length = 153
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Query: 58 LEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG-Y 116
LEPPD+PRLA ARISL+P E EEFAPKIRQV+DWFGQLQ VDL+SV+P+LRA + G
Sbjct: 58 LEPPDLPRLANAARISLSPEEAEEFAPKIRQVVDWFGQLQAVDLESVEPSLRAGTAAGNS 117
Query: 117 LREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
LRED P+TF NR+++I +VPSYD+PYIKVP+VLNKE
Sbjct: 118 LREDRPETFTNRDAIIESVPSYDDPYIKVPRVLNKE 153
>sp|A2XK57|GATC_ORYSI Glutamyl-tRNA(Gln) amidotransferase subunit C,
chloroplastic/mitochondrial OS=Oryza sativa subsp.
indica GN=GATC PE=3 SV=1
Length = 153
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Query: 58 LEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG-Y 116
LEPPD+PRLA ARISL+P E EEFAPKIRQV+DWFGQLQ VDL+SV+P+LRA + G
Sbjct: 58 LEPPDLPRLANAARISLSPEEAEEFAPKIRQVVDWFGQLQAVDLESVEPSLRAGTAAGNS 117
Query: 117 LREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
LRED P+TF NR+++I +VPSYD+PYIKVP+VLNKE
Sbjct: 118 LREDRPETFTNRDAIIESVPSYDDPYIKVPRVLNKE 153
>sp|C5WR30|GATC_SORBI Glutamyl-tRNA(Gln) amidotransferase subunit C,
chloroplastic/mitochondrial OS=Sorghum bicolor GN=GATC
PE=3 SV=1
Length = 146
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 30 KMPTRYYYYDYDYNNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQV 89
+ P Y+ ++ + LEPPD+ RLA ARISL+P E E+F PKIRQV
Sbjct: 23 RRPAARTYWPRPLSSSSHVTPAAAGAGELEPPDLTRLANAARISLSPQEAEDFEPKIRQV 82
Query: 90 IDWFGQLQDVDLDSVDPALRADSET-GYLREDIPKTFKNRESMIAAVPSYDEPYIKVPKV 148
+DWFGQLQ VDL+S++P+LRA + LRED P+TF NR++++ A+PSYD+PYIKVP+V
Sbjct: 83 VDWFGQLQAVDLESIEPSLRAGTTADSSLREDKPETFDNRDAIVEAIPSYDDPYIKVPRV 142
Query: 149 LNKE 152
LNKE
Sbjct: 143 LNKE 146
>sp|A9P2J1|GATC_PICSI Glutamyl-tRNA(Gln) amidotransferase subunit C,
chloroplastic/mitochondrial OS=Picea sitchensis GN=GATC
PE=2 SV=1
Length = 181
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 83/126 (65%), Gaps = 17/126 (13%)
Query: 25 SIFSSKMPTRYYYYDYDYNNRTRNCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84
S+ S P R+Y + ++ E PDV +LA ARISLTP EVE++ P
Sbjct: 67 SLISRSQPWRFY----------------SVHNNFEAPDVVQLAAKARISLTPKEVEDYGP 110
Query: 85 KIRQVIDWFGQLQDVDLDSVDPALRADSE-TGYLREDIPKTFKNRESMIAAVPSYDEPYI 143
KI QVIDWFGQLQ V+L++V+PA+RAD++ LR D P +++RE MIA VP+ +EP+I
Sbjct: 111 KIGQVIDWFGQLQGVNLENVEPAIRADTDKLSNLRPDEPIIYEDREEMIAGVPTLEEPFI 170
Query: 144 KVPKVL 149
KVPK+L
Sbjct: 171 KVPKIL 176
>sp|B0BZ26|GATC_ACAM1 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Acaryochloris marina (strain MBIC 11017) GN=gatC PE=3
SV=1
Length = 96
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 58 LEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYL 117
LE +V ++A AR+SLT E E+F ++ ++D+F QL ++D+ V+P RA +
Sbjct: 2 LERAEVDKVAHLARLSLTDAESEQFTTQLGDILDYFEQLSELDVAEVEPTTRAIDVSNVT 61
Query: 118 REDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
R D + +RES++A P ++ Y KVPK++ +
Sbjct: 62 RVDHLTPYDDRESILACAPDQEDEYFKVPKIMGE 95
>sp|B2J1S6|GATC_NOSP7 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=gatC PE=3 SV=1
Length = 97
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ LTP E E+F ++ ++D+ QL ++D+ +V P RA + RED
Sbjct: 7 VHKVANLARLELTPEEEEQFTTQLGSILDYIQQLDELDVSNVPPTTRAIDVSNITREDEL 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLN 150
+ + NRES++ + P + + KVPK+LN
Sbjct: 67 QPYANRESILNSAPEQEGEFFKVPKILN 94
>sp|B7K034|GATC_CYAP8 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Cyanothece sp. (strain PCC 8801) GN=gatC PE=3 SV=1
Length = 98
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 56/90 (62%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ +TP E E FAP++ ++ +F QL ++D ++V P RA + R D
Sbjct: 7 VEKIAHLARLEITPAEEEAFAPQLNSILQYFDQLSELDTENVPPMTRAIELSNITRSDRT 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
+T+ +RES++ + P + + +VP+++N +
Sbjct: 67 ETYGDRESLLKSAPEQEGDFFRVPQIMNND 96
>sp|Q3M691|GATC_ANAVT Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=gatC PE=3 SV=1
Length = 96
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ LTP E E+F ++ ++D+ QL ++D+ +V P RA + RED
Sbjct: 7 VRKVALLARLELTPQEEEQFTTQLGSILDYVEQLNELDVSNVPPTARAIDVSNITREDNL 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
+ + +RE+++++ P + + KVPK+LN E
Sbjct: 67 QPYADREAILSSAPEQEGEFFKVPKILNAE 96
>sp|P58527|GATC_NOSS1 Glutamyl-tRNA(Gln) amidotransferase subunit C OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=gatC PE=3 SV=1
Length = 96
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ LTP E E+F ++ ++D+ QL ++D+ +V P RA + RED
Sbjct: 7 VRKVALLARLELTPEEEEQFTTQLGSILDYVEQLNELDVSNVPPTARAIDVSNITREDNL 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
+ + +RE+++++ P + + KVPK+LN E
Sbjct: 67 QPYADREAILSSAPEQEGEFFKVPKILNAE 96
>sp|Q5FND2|GATC_GLUOX Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Gluconobacter oxydans (strain 621H) GN=gatC PE=3 SV=1
Length = 95
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%)
Query: 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGY 116
SL+ V R+A+ ARI L P E+E + +IDW QL++VD+ VDP +
Sbjct: 2 SLDAKTVTRIARLARIGLQPEEIETLGKDMGSIIDWVEQLKEVDVTGVDPMIGTGLAKPR 61
Query: 117 LREDIPKTFKNRESMIAAVPSYDEPYIKVPKVL 149
LRED R+ +++ P + P+ VPKV+
Sbjct: 62 LREDRVTDGNCRDKVLSNAPEREGPFYTVPKVV 94
>sp|A8G2P3|GATC_PROM2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus (strain MIT 9215) GN=gatC
PE=3 SV=1
Length = 97
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%)
Query: 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG 115
S + +V ++AQ AR+ L +E+ A ++ +++D+ QL+ +D D+V RA
Sbjct: 2 SRINKEEVKKVAQLARLELNINEINNHAEQLEKILDYIRQLEKIDTDNVPCTTRAIEVIN 61
Query: 116 YLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
R+D K + E ++ PS ++ Y KVPK++N+
Sbjct: 62 VFRKDEKKNYDRTEELLELGPSREDKYFKVPKIMNE 97
>sp|Q11R87|GATC_CYTH3 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469) GN=gatC PE=3 SV=1
Length = 95
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGY 116
SL+ + ++A AR+ +E F+ +++ W +L +V+ D+V+P + E
Sbjct: 2 SLDTKTIGKIAHLARLEFDDKSLEAFSTDFNKILSWIDKLNEVNTDNVEPLIHMSHELNV 61
Query: 117 LREDIPKTFKNRESMIAAVPSYDEPYIKVPKVL 149
LREDI K + E + P D Y +VPK L
Sbjct: 62 LREDIDKVTISHEEALKNAPKKDSDYFRVPKFL 94
>sp|Q7V354|GATC_PROMP Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=gatC PE=3 SV=1
Length = 97
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 53/90 (58%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
+V ++AQ AR+ L E+ + A ++ +++++ QL+ ++ + + RA LR+D
Sbjct: 8 EVKKVAQLARLELNESEINQHAEQLEKILEYIKQLEKINTEDIPCTTRAIEVVNVLRKDE 67
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
K ++N E ++ PS + + KVPK++N+
Sbjct: 68 KKNYENSEEILDLAPSRENKFFKVPKIINE 97
>sp|B1X0Z4|GATC_CYAA5 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Cyanothece sp. (strain ATCC 51142) GN=gatC PE=3 SV=1
Length = 98
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 55/88 (62%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ +T E E+FA ++ ++D+F QL ++D ++V P RA + R+D
Sbjct: 7 VQKIAHLARLDITSEEEEKFADQLSDILDYFEQLSELDTENVPPTTRAIELSNITRQDSF 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLN 150
+ + +R++++ P+ + + +VP++LN
Sbjct: 67 ELYHDRDALLNEAPNPEGDFFRVPQILN 94
>sp|A8FAR9|GATC_BACP2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Bacillus pumilus (strain SAFR-032) GN=gatC PE=3 SV=1
Length = 96
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSE 113
+R S+E +V +A AR+++T E E F ++ +I + QL +VD ++V+P
Sbjct: 2 SRISIE--EVKHVAHLARLAITEEEAEMFTEQLDSIISFAEQLNEVDTENVEPTTHVLKM 59
Query: 114 TGYLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLN 150
+RED+P + E++I P + + YI+VP +L+
Sbjct: 60 KNVMREDVPNKGLSIEAVIKNAPDHKDGYIRVPSILD 96
>sp|B8HU22|GATC_CYAP4 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gatC
PE=3 SV=1
Length = 97
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 58 LEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYL 117
L V ++A AR+ L+ EV +F ++ ++D+F QL+++++ V P RA +
Sbjct: 2 LNEEQVKKVAHLARLELSGEEVAQFTTQLGSILDYFQQLEELNVTDVPPTTRAIESSNIT 61
Query: 118 REDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
R D + RE+++A P D + +VPK+++ E
Sbjct: 62 RADQLHPWAERENILAIAPEQDGDFFRVPKIISTE 96
>sp|B1XNN1|GATC_SYNP2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=gatC PE=3 SV=1
Length = 97
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ LTP E + ++ ++D+ QL ++D D+V+P RA + R D
Sbjct: 7 VRKVAHLARLELTPEEEQRLPSQLSAILDYVEQLSELDTDNVEPTTRAIDVSNITRTDEQ 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
KTF + + ++ P ++ Y +VPK+L +
Sbjct: 67 KTFGDCQLLLDNAPDREDDYFRVPKILGE 95
>sp|A9HRJ1|GATC_GLUDA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 /
DSM 5601 / PAl5) GN=gatC PE=3 SV=1
Length = 95
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGY 116
SL+P V R+A+ ARI + ++ ++ ++ W QL +VD+D V+P +
Sbjct: 2 SLDPATVRRIARLARIGIDESDLHALQGELNGILGWIEQLNEVDIDGVEPMVGTGHAALR 61
Query: 117 LREDIPKTFKNRESMIAAVPSYDEPYIKVPKVL 149
+RED+ R+++++ P P+ VPKV+
Sbjct: 62 MREDVVTDGAARDAVLSNAPDAAGPFYTVPKVV 94
>sp|A2BP33|GATC_PROMS Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus (strain AS9601) GN=gatC PE=3
SV=1
Length = 97
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG 115
+ + +V ++A AR+ L +E+ A ++ +++D+ QL+ +D D V RA
Sbjct: 2 TKITKEEVNKVAHLARLELNENEINNHAEQLEKILDYIRQLEKIDTDDVPCTTRAIEVVN 61
Query: 116 YLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
R+D K E ++ PS ++ Y KVPK+LN+
Sbjct: 62 VFRKDEKKNSDCNEELLELGPSREDKYFKVPKILNE 97
>sp|A8AVE1|GATC_STRGC Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Streptococcus gordonii (strain Challis / ATCC 35105 /
CH1 / DL1 / V288) GN=gatC PE=3 SV=1
Length = 100
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
+V +A+ ++++ +P E EFA + +++D L +VD + V + Y+RED+
Sbjct: 7 EVSHVAKLSKLAFSPEETAEFATTLSKIVDMVELLNEVDTEGVPFTSNVAANINYMREDV 66
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVLN 150
+ NRE + VP + YIKVP +L+
Sbjct: 67 AQPGWNREELFQNVPEKERGYIKVPAILD 95
>sp|A3CLF7|GATC_STRSV Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Streptococcus sanguinis (strain SK36) GN=gatC PE=3
SV=1
Length = 100
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
+V +A+ ++++ +P E EFA + +++D L +VD + V + Y+RED+
Sbjct: 7 EVSHVAKLSKLAFSPEETAEFATTLTKIVDMVELLNEVDTEGVPFTSNVAANINYMREDV 66
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVLN 150
+ NRE + VP + YIKVP +L+
Sbjct: 67 AQPGWNREELFQNVPEKERGYIKVPAILD 95
>sp|B7KKZ9|GATC_CYAP7 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Cyanothece sp. (strain PCC 7424) GN=gatC PE=3 SV=1
Length = 98
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ +TP + E+F ++ ++++F QL ++D V P RA R D
Sbjct: 7 VKKIAHLARLEITPEQEEQFTGQLSSILEYFDQLSELDTTDVPPTTRAIEIKNITRSDSM 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLN 150
+ + +RE ++ P + + KVP++LN
Sbjct: 67 QPYPSREELLKEAPEQEGDFFKVPQILN 94
>sp|A2BUL5|GATC_PROM5 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus (strain MIT 9515) GN=gatC
PE=3 SV=1
Length = 97
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 55/90 (61%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
+V ++A+ AR+ L +E+ + A ++ +++++ QL+ ++ +++ RA LR+D
Sbjct: 8 EVKKVAELARLELNENEIHQHAEQLEKILEYIKQLEKINTENIACTTRAIEVVNVLRKDE 67
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
+ ++N + ++ PS + + KVPK++N+
Sbjct: 68 RRDYENSDELLDLAPSRENKFFKVPKIINE 97
>sp|B8E2U4|GATC_DICTD Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724)
GN=gatC PE=3 SV=1
Length = 100
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
+ + A AR+ LTP E E +A +++ ++D+F +LQ+VD +++P S + RED P
Sbjct: 10 LKKTAHLARLYLTPEEEELYAKQLQDILDYFKKLQEVDTSNIEPMAHVLSLSNIWREDEP 69
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
K ++E P + K+P+++ +E
Sbjct: 70 KGSISQEEAFKNAPEIENLGFKIPRIIKRE 99
>sp|A2C068|GATC_PROM1 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus (strain NATL1A) GN=gatC PE=3
SV=1
Length = 95
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 52/88 (59%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
DV ++AQ AR+ L ++E + ++ +++ + QLQ++D +++ P RA +R+D+
Sbjct: 8 DVRKVAQLARLELPEDQIETYTEQLEEILSYVDQLQEIDTENIPPTTRAVEVVNSMRDDL 67
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVL 149
+ +RE ++ P + + +VPK+L
Sbjct: 68 VEVNCSREDLLNQAPHREGDFFRVPKIL 95
>sp|A3PAV5|GATC_PROM0 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus (strain MIT 9301) GN=gatC
PE=3 SV=1
Length = 97
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG 115
+ + +V ++A AR+ L +E+ A ++ +++D+ QL+ +D D V RA
Sbjct: 2 TKITKEEVNKVANLARLELNENEINNHAEQLEKILDYIRQLEKIDTDDVPCTTRAIEVVN 61
Query: 116 YLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
R+D K E ++ PS ++ Y KVPK++N+
Sbjct: 62 VFRKDENKNSDCNEEILELGPSREDKYFKVPKIINE 97
>sp|Q12VH0|GATC_METBU Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Methanococcoides burtonii (strain DSM 6242) GN=gatC
PE=3 SV=1
Length = 93
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
+V + ARI + E E++A K+ V+D+FGQL +VD + V+P RED+
Sbjct: 6 EVEHVGWLARIEIGAAEAEDYAVKLSSVLDYFGQLDEVDTEGVEPTYHVADIMNVFREDV 65
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVL 149
K +++ ++A + YIK P+++
Sbjct: 66 VKPSLDQKDVLANTAEEKDGYIKAPRII 93
>sp|Q032T4|GATC_LACLS Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Lactococcus lactis subsp. cremoris (strain SK11)
GN=gatC PE=3 SV=1
Length = 101
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG 115
S + V +A +++ + +EV+ F ++ID L +VD D V +
Sbjct: 2 SQITEEQVKHVALLSKLEFSENEVKSFTDTFGKIIDMVEMLDEVDTDGVPFTMNVADNLN 61
Query: 116 YLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLN 150
++RED+ + +RE ++AAVP ++ +IKVP +L+
Sbjct: 62 FMREDVAEKGLDREKLMAAVPEKEDGFIKVPAMLS 96
>sp|A2RHP4|GATC_LACLM Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=gatC PE=3 SV=1
Length = 101
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG 115
S + V +A +++ + +EV+ F ++ID L +VD D V +
Sbjct: 2 SQITEEQVKHVALLSKLEFSENEVKSFTVTFGKIIDMVEMLDEVDTDGVPFTMNVADNLN 61
Query: 116 YLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLN 150
++RED+ + +RE ++AAVP ++ +IKVP +L+
Sbjct: 62 FMREDVAEKGLDREKLMAAVPEKEDGFIKVPAMLS 96
>sp|Q8DIQ7|GATC_THEEB Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Thermosynechococcus elongatus (strain BP-1) GN=gatC
PE=3 SV=1
Length = 97
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
DV ++A AR+++ E+E ++ ++D+ QL ++D+ V P RA + R D+
Sbjct: 10 DVRKVAHLARLAIDESEIEALTQQLDSILDYVNQLSELDVTEVPPTTRAIEVSNVTRPDV 69
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVL 149
+ NRE ++A P ++ + +VPK++
Sbjct: 70 LAPWPNREDLLAIAPEREDDFFRVPKIM 97
>sp|Q46HD8|GATC_PROMT Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus (strain NATL2A) GN=gatC PE=3
SV=1
Length = 95
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 51/88 (57%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
DV ++AQ AR+ L ++E + ++ +++ + QLQ++D ++ P RA +R+D+
Sbjct: 8 DVRKVAQLARLELPEDQIETYTEQLEEILSYVDQLQEIDTKNIPPTTRAVEVVNAMRDDL 67
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVL 149
+ +RE ++ P + + +VPK+L
Sbjct: 68 VEVNCSREDLLNQAPHREGDFFRVPKIL 95
>sp|A9BDK3|GATC_PROM4 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus (strain MIT 9211) GN=gatC
PE=3 SV=1
Length = 97
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 53/90 (58%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
DV ++A AR++L ++ + ++ +++ + QL++VD + + P RA T LREDI
Sbjct: 8 DVRKVATLARLNLPEDLIDTYTSQLEKILGYVAQLEEVDTEDIPPTSRAVEVTNVLREDI 67
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
+ RE +I P+ + + +VPK+L++
Sbjct: 68 IQETDIREDLINLAPNREGDFFRVPKILSE 97
>sp|A5V3V1|GATC_SPHWW Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM
10273) GN=gatC PE=3 SV=1
Length = 95
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGY 116
S++ V ++A ARI++T +VE P++ ++ W QL +VD D V P
Sbjct: 2 SVDAATVRKIASLARIAVTDGDVEAMVPELNNILGWIEQLGEVDTDGVAPLAAVIPNHQR 61
Query: 117 LREDIPKTFKNRESMIAAVPSYDEPYIKVPKVL 149
LR+D+ R+ ++A P + + VPKV+
Sbjct: 62 LRDDVVTDGNIRDKVLANAPQAEHGFFAVPKVI 94
>sp|Q2ND76|GATC_ERYLH Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Erythrobacter litoralis (strain HTCC2594) GN=gatC
PE=3 SV=1
Length = 100
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGY 116
S++ V ++A ARI +T E+E+ AP++ ++DW QL +VD V+P T
Sbjct: 2 SVDKETVAKIASLARIKMTDAELEKMAPELSNILDWVEQLGEVDTSDVEPMTAVIPNTLR 61
Query: 117 LREDI----PKTFKN-RESMIAAVPSYDEPYIKVPKVL 149
LRED P T R+ ++A P+ + + VPKV+
Sbjct: 62 LREDEVNADPLTGGGVRDKVLANAPAAEHGFFGVPKVI 99
>sp|Q7VDV3|GATC_PROMA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
SS120) GN=gatC PE=3 SV=1
Length = 97
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 51/88 (57%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
DV ++++ AR+ ++ VE +A ++ +++++ QL+ +D ++ P RA LREDI
Sbjct: 8 DVRKVSKLARLEISEEHVETYANQLEEILEYIAQLEKIDTKNIPPTTRAVEVVNVLREDI 67
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVL 149
R+ ++ P+ + + +VPK+L
Sbjct: 68 VDKSNVRDKILDLAPNREGQFYRVPKIL 95
>sp|Q1DCA4|GATC_MYXXD Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Myxococcus xanthus (strain DK 1622) GN=gatC PE=3 SV=1
Length = 95
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V +A AR+SLTP E + F ++ V+D QLQ +D+++V+P A + LRED+
Sbjct: 8 VRHVATLARLSLTPEEEQRFTTQLSAVLDAVEQLQSLDVEAVEPTSHATLTSSRLREDVT 67
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLN 150
+ E +A P+ + VPK++
Sbjct: 68 RPSLPPEKSLANAPAKSDTSFAVPKIIE 95
>sp|A5GW52|GATC_SYNR3 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Synechococcus sp. (strain RCC307) GN=gatC PE=3 SV=1
Length = 97
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG 115
S + DV ++AQ AR+ L + F P++ +++D+ QL+ +D + + P RA
Sbjct: 2 SHISADDVRKVAQLARLDLPDDSIATFTPQLERILDFVAQLEAIDTEGLPPTTRAVEVVN 61
Query: 116 YLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLN 150
RED + RE ++ P + + +VP++LN
Sbjct: 62 VTREDGVEPTPVREELLNQAPQREGDFFRVPRILN 96
>sp|Q04BV8|GATC_LACDB Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Lactobacillus delbrueckii subsp. bulgaricus (strain
ATCC BAA-365) GN=gatC PE=3 SV=1
Length = 101
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 51/90 (56%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
+ +A A++ + E+ +F P++ ++++ +LQ VD V+ ++ RED+P
Sbjct: 9 IKHVAALAQLEFSEEELAKFTPQMGKILEMAEELQAVDTTGVEETVQVVDRDTVFREDVP 68
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
+ ++ RE M+ VP ++KVP +++K+
Sbjct: 69 EKWQTREEMMKNVPDKSNGFVKVPVIIDKD 98
>sp|Q1GBF5|GATC_LACDA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Lactobacillus delbrueckii subsp. bulgaricus (strain
ATCC 11842 / DSM 20081) GN=gatC PE=3 SV=1
Length = 101
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 51/90 (56%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
+ +A A++ + E+ +F P++ ++++ +LQ VD V+ ++ RED+P
Sbjct: 9 IKHVAALAQLEFSEEELAKFTPQMGKILEMAEELQAVDTTGVEETVQVVDRDTVFREDVP 68
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLNKE 152
+ ++ RE M+ VP ++KVP +++K+
Sbjct: 69 EKWQTREEMMKNVPDKSNGFVKVPVIIDKD 98
>sp|A1T6X9|GATC_MYCVP Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
GN=gatC PE=3 SV=1
Length = 99
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG 115
S + +V LA+ AR++LT E++ FA ++ ++ GQ+Q VD+ V+ +
Sbjct: 2 SQISRDEVAHLARLARLALTDSELDSFAGQLDAILGHVGQIQTVDVTGVEATGNPLKDVN 61
Query: 116 YLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLNK 151
R D+ +E +AA P+ DE VP++L +
Sbjct: 62 VFRPDVEAPSLTQEQALAAAPNTDEGRFAVPRILGE 97
>sp|Q9CJ44|GATC_LACLA Glutamyl-tRNA(Gln) amidotransferase subunit C OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=gatC PE=3 SV=1
Length = 101
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%)
Query: 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETG 115
S + V +A +++ + +EV+ F ++ID L +VD + V +
Sbjct: 2 SQITEEQVKHVALLSKLEFSENEVKSFTDTFGKIIDMVEMLDEVDGEGVPFTMNVADNLN 61
Query: 116 YLREDIPKTFKNRESMIAAVPSYDEPYIKVPKVLN 150
++RED+ + +RE ++AAVP ++ +IKVP +L+
Sbjct: 62 FMREDVAEKGLDREKLMAAVPEKEDGFIKVPAMLS 96
>sp|Q0W278|GATC_UNCMA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Uncultured methanogenic archaeon RC-I GN=gatC PE=3
SV=1
Length = 93
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
DV + A I L+P E FA + ++D+F +L +V+ D V+P T RED+
Sbjct: 6 DVEHIGSLACIDLSPEETGLFAKQFNSILDYFRELDEVNTDGVEPTHHVIGLTNVFREDV 65
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVL 149
+E IA ++ +IK P+++
Sbjct: 66 AGESLTQEECIANAARKEKGFIKGPRIV 93
>sp|A4XHY7|GATC_CALS8 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=gatC PE=3 SV=1
Length = 94
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 62 DVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDI 121
DV +A AR++LT E+E+ ++ +I++ +L D+D + ++P + R D
Sbjct: 6 DVEYVANLARLTLTEEEIEKMTKELGAIIEFANKLSDLDTEGIEPTAHVLNLYNVFRSDE 65
Query: 122 PKTFKNRESMIAAVPSYDEPYIKVPKVL 149
K RE ++ PS+D+ IKVPK++
Sbjct: 66 VKPSYPREEILKNAPSHDDVCIKVPKIV 93
>sp|Q5FLL2|GATC_LACAC Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56
/ N2 / NCFM) GN=gatC PE=3 SV=1
Length = 102
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
+ +A +R++ E+++F ++ +I+ QL +VD + V+ ++ REDIP
Sbjct: 8 IKHVATLSRLAFNEEELDKFTDQMGSIINMADQLSEVDTEGVEETVQVVDRDTVFREDIP 67
Query: 123 KTFKN--RESMIAAVPSYDEPYIKVPKVLNKE 152
+ ++ RE+++ VP YIKVP ++NK+
Sbjct: 68 EHWQGQTRETLMENVPEKANGYIKVPVIINKD 99
>sp|B0JVY2|GATC_MICAN Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Microcystis aeruginosa (strain NIES-843) GN=gatC PE=3
SV=1
Length = 98
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ + E E+FA ++ ++D+F QL ++D ++V P RA R D
Sbjct: 7 VEKIAHLARLEINSGEEEQFALQLSGILDYFEQLSELDTENVLPTTRAIEIQNITRADSN 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLN 150
+ + + E ++ P+ + Y VP++LN
Sbjct: 67 RLYPDHEVLVQESPAPEGDYFLVPRILN 94
>sp|Q7NG91|GATC_GLOVI Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
OS=Gloeobacter violaceus (strain PCC 7421) GN=gatC PE=3
SV=1
Length = 95
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 63 VPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIP 122
V ++A AR+ ++ E E F ++ ++D+ +LQ VD + V P RA +R D
Sbjct: 7 VKKVAFLARLEISEQEQEMFTRQLGAILDYIAELQQVDTEGVPPTTRAIEVHNVVRPDAL 66
Query: 123 KTFKNRESMIAAVPSYDEPYIKVPKVLN 150
F++RE ++ P E + KVP+++
Sbjct: 67 VVFEDREGILENAPERAEDFFKVPRIME 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,904,797
Number of Sequences: 539616
Number of extensions: 2351874
Number of successful extensions: 7102
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 6632
Number of HSP's gapped (non-prelim): 489
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)