Query 031809
Match_columns 152
No_of_seqs 135 out of 1126
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 08:41:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031809.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031809hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ip4_C Aspartyl/glutamyl-tRNA( 100.0 2.5E-35 8.4E-40 211.9 10.7 98 55-152 1-98 (100)
2 3h0l_C Glutamyl-tRNA(Gln) amid 100.0 1.5E-33 5.1E-38 200.5 9.7 93 57-150 1-93 (94)
3 3kfu_G Glutamyl-tRNA(Gln) amid 100.0 8E-32 2.8E-36 191.0 10.4 89 56-150 4-92 (92)
4 3al0_C Glutamyl-tRNA(Gln) amid 99.9 2.1E-27 7.3E-32 213.8 8.5 97 55-151 2-98 (592)
5 2lv7_A Calcium-binding protein 43.1 30 0.001 22.8 4.0 33 53-85 48-80 (100)
6 1h8b_A ACT-EF34, alpha-actinin 43.0 16 0.00055 23.5 2.5 27 52-85 20-46 (75)
7 2veb_A Protoglobin; hemoprotei 41.2 34 0.0012 26.5 4.5 34 48-83 10-43 (195)
8 3a1k_A Amidase; AS family enzy 39.8 38 0.0013 29.4 5.1 45 56-100 4-48 (521)
9 2lhi_A Calmodulin, serine/thre 38.0 45 0.0015 23.8 4.6 33 53-85 96-128 (176)
10 1tiz_A Calmodulin-related prot 36.1 51 0.0018 18.6 3.9 30 55-84 15-44 (67)
11 1taf_B TFIID TBP associated fa 34.1 93 0.0032 20.0 6.0 39 55-93 4-43 (70)
12 2kn2_A Calmodulin; S MAPK phos 33.8 47 0.0016 20.4 3.7 31 55-85 23-53 (92)
13 1s6j_A CDPK, calcium-dependent 32.9 51 0.0018 19.9 3.7 32 54-85 36-67 (87)
14 2kz2_A Calmodulin, CAM; TR2C, 31.6 77 0.0026 20.0 4.5 32 54-85 42-73 (94)
15 3i5g_C Myosin catalytic light 31.0 37 0.0013 23.9 3.1 32 54-85 98-129 (159)
16 1avs_A Troponin C; muscle cont 30.7 62 0.0021 19.8 3.9 32 54-85 33-64 (90)
17 1k2h_A S100A1, S-100 protein, 29.2 96 0.0033 18.9 4.6 30 57-86 27-61 (93)
18 3i5g_B Myosin regulatory light 28.8 38 0.0013 23.7 2.8 32 53-84 97-128 (153)
19 3rm1_A Protein S100-B; alpha-h 28.7 86 0.003 19.8 4.4 31 56-86 26-61 (92)
20 1exr_A Calmodulin; high resolu 26.2 1E+02 0.0035 20.4 4.6 32 54-85 96-127 (148)
21 2ktg_A Calmodulin, putative; e 25.7 66 0.0023 19.3 3.2 32 55-86 28-59 (85)
22 3j04_B Myosin regulatory light 25.6 72 0.0025 20.8 3.6 31 54-84 89-119 (143)
23 2d8n_A Recoverin; structural g 25.1 1.3E+02 0.0045 21.2 5.2 30 56-87 14-43 (207)
24 4ds7_A Calmodulin, CAM; protei 24.8 84 0.0029 20.4 3.9 33 54-86 97-129 (147)
25 3o0r_C Nitric oxide reductase 24.6 62 0.0021 22.2 3.2 22 85-106 121-142 (146)
26 2b1u_A Calmodulin-like protein 24.4 43 0.0015 19.3 2.0 29 55-83 20-48 (71)
27 2ovk_B RLC, myosin regulatory 24.4 98 0.0034 20.5 4.2 32 54-85 98-129 (153)
28 2lmt_A Calmodulin-related prot 24.3 80 0.0027 21.3 3.7 32 54-85 96-127 (148)
29 3deu_A Transcriptional regulat 24.3 71 0.0024 22.5 3.6 27 73-99 139-165 (166)
30 1ggw_A Protein (CDC4P); light 23.7 73 0.0025 20.8 3.4 31 54-84 89-119 (140)
31 2joj_A Centrin protein; N-term 23.7 55 0.0019 19.2 2.5 31 55-85 21-51 (77)
32 3nso_A Protein S100-A3; EF-han 23.4 1E+02 0.0035 20.5 4.0 32 56-87 27-63 (101)
33 3qrx_A Centrin; calcium-bindin 23.3 1.2E+02 0.0041 20.3 4.6 32 54-85 114-145 (169)
34 2e9x_A DNA replication complex 23.0 1.3E+02 0.0044 21.6 4.8 35 72-106 104-142 (149)
35 2bl0_C Myosin regulatory light 22.9 1E+02 0.0035 20.0 4.0 32 54-85 92-123 (142)
36 3a1y_A 50S ribosomal protein P 22.8 1.1E+02 0.0038 18.7 3.8 31 56-86 15-45 (58)
37 2lbf_B 60S acidic ribosomal pr 22.7 83 0.0028 20.2 3.3 31 57-87 18-48 (70)
38 2obh_A Centrin-2; DNA repair c 22.5 1.3E+02 0.0045 19.9 4.6 32 54-85 92-123 (143)
39 2wuj_A Septum site-determining 21.3 28 0.00097 21.4 0.7 38 56-93 1-39 (57)
40 1qa6_A Ribosomal protein L11; 21.0 1.2E+02 0.004 19.3 3.7 35 54-88 26-60 (67)
41 2lnk_A Protein S100-A4; EF-han 20.7 1.1E+02 0.0038 20.7 3.9 30 57-86 40-74 (113)
42 3ox6_A Calcium-binding protein 20.5 1.5E+02 0.0051 19.2 4.4 30 56-85 26-55 (153)
43 1wlz_A DJBP, CAP-binding prote 20.3 74 0.0025 20.0 2.7 30 54-83 37-66 (105)
44 2jjz_A Ionized calcium-binding 20.0 1.7E+02 0.0057 20.0 4.8 34 54-87 63-96 (150)
No 1
>3ip4_C Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: a.137.12.1 PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=100.00 E-value=2.5e-35 Score=211.86 Aligned_cols=98 Identities=24% Similarity=0.397 Sum_probs=91.4
Q ss_pred CCCCChhHHHHHHHHcCCCCChhHHHHHHHHHHHHHHHHHhhccCCCCCCCCccccCCCCCCCCCCCCCCCCCHHHHHhc
Q 031809 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIPKTFKNRESMIAA 134 (152)
Q Consensus 55 ~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~~Il~~~d~L~evDt~~VeP~~~~~~~~~~LReD~v~~~~~~e~iL~N 134 (152)
||.|++++|+|||+||||+|+++|++.+.++|++||+||++|++|||+||+||+|+.+..++||+|++.++++++++|+|
T Consensus 1 Mm~i~~e~v~~iA~LArL~l~eeE~~~~~~~l~~Il~~ve~L~evDt~~VeP~~~~~~~~~~lReD~v~~~~~~e~~L~n 80 (100)
T 3ip4_C 1 MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKN 80 (100)
T ss_dssp --CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHGGGGGSCCTTCCCCSCCSCCCCCCBCSCCCCCCCHHHHHTT
T ss_pred CCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCCCCCCCHHHHHHc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEecccccCC
Q 031809 135 VPSYDEPYIKVPKVLNKE 152 (152)
Q Consensus 135 Ap~~e~gyf~VPkVie~~ 152 (152)
||..++|||+|||||++|
T Consensus 81 AP~~e~g~f~VPkVie~~ 98 (100)
T 3ip4_C 81 AKETEDGQFKVPTIMNEE 98 (100)
T ss_dssp CSSEETTEEEEECC----
T ss_pred CchhcCCeEEeccccCCC
Confidence 999999999999999864
No 2
>3h0l_C Glutamyl-tRNA(Gln) amidotransferase subunit C; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_C 3h0r_C*
Probab=100.00 E-value=1.5e-33 Score=200.45 Aligned_cols=93 Identities=27% Similarity=0.522 Sum_probs=90.2
Q ss_pred CCChhHHHHHHHHcCCCCChhHHHHHHHHHHHHHHHHHhhccCCCCCCCCccccCCCCCCCCCCCCCCCCCHHHHHhcCC
Q 031809 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIPKTFKNRESMIAAVP 136 (152)
Q Consensus 57 ~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~~Il~~~d~L~evDt~~VeP~~~~~~~~~~LReD~v~~~~~~e~iL~NAp 136 (152)
+|++++|+|||+||||+|+++|++.+.++|++||+||++|+++||+||+||+|+.+. ++||+|++.++.+++++|+|||
T Consensus 1 ~i~~e~v~~iA~LArL~l~eee~~~~~~~l~~Il~~ve~L~evDt~~VeP~~~~~~~-~~lReD~v~~~~~~e~~L~nAP 79 (94)
T 3h0l_C 1 MVDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEE-TPMREDEPHPSLDREKALMNAP 79 (94)
T ss_dssp -CCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTTGGGSCCTTCCCCCCCCSS-CCCBCSCCCCCCCHHHHHTTCS
T ss_pred CCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCcCcccCcccc-cCCCCCCCCCCCCHHHHHHcCc
Confidence 489999999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred CCCCCcEEeccccc
Q 031809 137 SYDEPYIKVPKVLN 150 (152)
Q Consensus 137 ~~e~gyf~VPkVie 150 (152)
..++|||+|||||+
T Consensus 80 ~~e~g~f~VPkVie 93 (94)
T 3h0l_C 80 ERKDGFFVVPRVVE 93 (94)
T ss_dssp SEETTEEEEECCC-
T ss_pred hhcCCeEEcceEec
Confidence 99999999999996
No 3
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=99.97 E-value=8e-32 Score=190.97 Aligned_cols=89 Identities=26% Similarity=0.488 Sum_probs=84.7
Q ss_pred CCCChhHHHHHHHHcCCCCChhHHHHHHHHHHHHHHHHHhhccCCCCCCCCccccCCCCCCCCCCCCCCCCCHHHHHhcC
Q 031809 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIPKTFKNRESMIAAV 135 (152)
Q Consensus 56 ~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~~Il~~~d~L~evDt~~VeP~~~~~~~~~~LReD~v~~~~~~e~iL~NA 135 (152)
|.|++++|+|||+||||+|+++|++.+.++|++||+||++|+++||+||+| ..++||+|++.++++++++|+||
T Consensus 4 M~i~~e~V~~iA~LArL~l~eeE~~~~~~~l~~Il~~ve~L~evDt~~VeP------~~~~lReD~v~~~~~~e~~L~nA 77 (92)
T 3kfu_G 4 MELSPELLRKLETLAKIRLSPEEEALLLQDLKRILDFVDALPRVEEGGAEE------ALGRLREDEPRPSLPQAEALALA 77 (92)
T ss_dssp -CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCC------CCCCCBCSCCCCCCCHHHHHTTC
T ss_pred CccCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC------CcCCCCCCCCCCCCCHHHHHHcC
Confidence 789999999999999999999999999999999999999999999999999 57899999999999999999999
Q ss_pred CCCCCCcEEeccccc
Q 031809 136 PSYDEPYIKVPKVLN 150 (152)
Q Consensus 136 p~~e~gyf~VPkVie 150 (152)
|..++|||+||||||
T Consensus 78 P~~e~g~f~VPkVie 92 (92)
T 3kfu_G 78 PEAEDGFFRVPPVLE 92 (92)
T ss_dssp SSEETTEEEECCC--
T ss_pred chhcCCeEEeceecC
Confidence 999999999999986
No 4
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=99.94 E-value=2.1e-27 Score=213.83 Aligned_cols=97 Identities=23% Similarity=0.401 Sum_probs=91.3
Q ss_pred CCCCChhHHHHHHHHcCCCCChhHHHHHHHHHHHHHHHHHhhccCCCCCCCCccccCCCCCCCCCCCCCCCCCHHHHHhc
Q 031809 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRADSETGYLREDIPKTFKNRESMIAA 134 (152)
Q Consensus 55 ~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~~Il~~~d~L~evDt~~VeP~~~~~~~~~~LReD~v~~~~~~e~iL~N 134 (152)
||.|++++|+|||+||||+|+++|++.+.++|++||+||++|++|||+||+||+|+.+..++||+|++.++++++++|+|
T Consensus 2 ~m~i~~e~v~~iA~LArL~l~eee~~~~~~~l~~Il~~ve~L~evDt~~Vep~~~~~~~~~~lReD~v~~~~~~e~~L~n 81 (592)
T 3al0_C 2 GIKVTKDLVLHLENLARLELSEDQRESLMKDFQEILDYVELLNEVDVEGVEPMYTPVEDSAKLRKGDPRFFEMRDLIKKN 81 (592)
T ss_dssp --CCCSTHHHHHHTTTTCCCCSSSHHHHHHHHHHHHHHHTTTCSSCCSSCCCCSCCSCSCCCCBCCCCCCCTTHHHHHTT
T ss_pred CCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcCcccccccccCCCCcCCCCCCHHHHHhc
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEecccccC
Q 031809 135 VPSYDEPYIKVPKVLNK 151 (152)
Q Consensus 135 Ap~~e~gyf~VPkVie~ 151 (152)
||+.++|||+|||||++
T Consensus 82 AP~~e~g~f~VPkVie~ 98 (592)
T 3al0_C 82 FPEEKDGHIKVPGIHRG 98 (592)
T ss_dssp CSCEETTEEEEECC---
T ss_pred CchhhCCEEEEEEEccc
Confidence 99999999999999986
No 5
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=43.09 E-value=30 Score=22.82 Aligned_cols=33 Identities=6% Similarity=0.043 Sum_probs=25.4
Q ss_pred CCCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 53 TTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 53 ~~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
...-.|+.++++.+.+-.-+.++++|++.+..+
T Consensus 48 d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~ 80 (100)
T 2lv7_A 48 DGNGFISKQELGTAMRSLGYMPNEVELEVIIQR 80 (100)
T ss_dssp SCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 345679999999988888888888887666444
No 6
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=43.04 E-value=16 Score=23.51 Aligned_cols=27 Identities=11% Similarity=0.310 Sum_probs=22.0
Q ss_pred CCCCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 52 TTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 52 ~~~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
+.....|+.+++++ .|+++|++.+.++
T Consensus 20 ~dg~G~It~~eLr~-------~lt~eevd~~i~~ 46 (75)
T 1h8b_A 20 ASDKPYILAEELRR-------ELPPDQAQYCIKR 46 (75)
T ss_dssp TTSCSSBCHHHHHH-------HSCHHHHHHHHHH
T ss_pred hcCCCCcCHHHHHh-------cCCHHHHHHHHHh
Confidence 34567899999999 5999999888766
No 7
>2veb_A Protoglobin; hemoprotein structure, protein matrix tunnels, methanogenesis, archaea protein, transport protein; HET: HEM; 1.30A {Methanosarcina acetivorans} PDB: 2vee_A* 3r0g_A* 3qzz_A* 3qzx_A*
Probab=41.25 E-value=34 Score=26.47 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=25.1
Q ss_pred CCCCCCCCCCCChhHHHHHHHHcCCCCChhHHHHHH
Q 031809 48 NCSTTTTRSSLEPPDVPRLAQTARISLTPHEVEEFA 83 (152)
Q Consensus 48 ~~ss~~~~~~I~~E~v~~LA~LArL~L~eeE~e~~~ 83 (152)
.+++....+.|+.++++.|-++ +.|++++.+.+.
T Consensus 10 ~~g~~~~~~~i~m~~le~Lk~~--~~fTeeD~~~L~ 43 (195)
T 2veb_A 10 TYGETENRAPFNLEDLKLLKEA--VMFTAEDEEYIQ 43 (195)
T ss_dssp CTTCCCCCCSCCHHHHHHHHHH--HTCCHHHHHHHH
T ss_pred CCCCccccCCccHHHHHHHHHH--hCCCHHHHHHHH
Confidence 4555558899999999999874 566777765544
No 8
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A
Probab=39.83 E-value=38 Score=29.41 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=39.4
Q ss_pred CCCChhHHHHHHHHcCCCCChhHHHHHHHHHHHHHHHHHhhccCC
Q 031809 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVD 100 (152)
Q Consensus 56 ~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~~Il~~~d~L~evD 100 (152)
..+|.+++...+....+.|.++|+..+.+-++..++.++.+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (521)
T 3a1k_A 4 IRPDDKAIDAAARHYGITLDKTARLEWPALIDGALGSYDVVDQLY 48 (521)
T ss_dssp CCCCHHHHHHHHHHTTCCCCTTHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 458999999999999999999999999999998888887777544
No 9
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=38.02 E-value=45 Score=23.83 Aligned_cols=33 Identities=12% Similarity=0.217 Sum_probs=26.9
Q ss_pred CCCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 53 TTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 53 ~~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
...-.|+.++++++..-....++++|++.+..+
T Consensus 96 d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~ 128 (176)
T 2lhi_A 96 NGDGLISAAELKHVLTSIGEKLTDAEVDDMLRE 128 (176)
T ss_dssp SCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHHHcCcccchHHHHHHHHh
Confidence 345689999999999988889999988766543
No 10
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=36.08 E-value=51 Score=18.60 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=23.5
Q ss_pred CCCCChhHHHHHHHHcCCCCChhHHHHHHH
Q 031809 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (152)
Q Consensus 55 ~~~I~~E~v~~LA~LArL~L~eeE~e~~~~ 84 (152)
...|+.+++..+.+.....+++++++.+..
T Consensus 15 ~G~i~~~el~~~l~~~~~~~~~~~~~~~~~ 44 (67)
T 1tiz_A 15 DGKLSLDEFREVALAFSPYFTQEDIVKFFE 44 (67)
T ss_dssp SSCEEHHHHHHHHHHTCTTSCHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 457999999999888888888887655444
No 11
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=34.05 E-value=93 Score=19.96 Aligned_cols=39 Identities=18% Similarity=0.293 Sum_probs=33.8
Q ss_pred CCCCChhHHHHHHHHcCC-CCChhHHHHHHHHHHHHHHHH
Q 031809 55 RSSLEPPDVPRLAQTARI-SLTPHEVEEFAPKIRQVIDWF 93 (152)
Q Consensus 55 ~~~I~~E~v~~LA~LArL-~L~eeE~e~~~~~l~~Il~~~ 93 (152)
|..+..+-|+.+|+-+=+ .++|+-...+.++++..+..+
T Consensus 4 ~s~lp~~~v~~iaes~Gi~~lsddaa~~LA~dvEyr~~eI 43 (70)
T 1taf_B 4 GSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRI 43 (70)
T ss_dssp SCCCCHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 567999999999999999 899999988888888776655
No 12
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=33.81 E-value=47 Score=20.41 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=25.1
Q ss_pred CCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 55 ~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
...|+.+++..+.+.....+++++++.+...
T Consensus 23 ~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~ 53 (92)
T 2kn2_A 23 NGYISASELRHVMINLGEKLTDEEVEQMIKE 53 (92)
T ss_dssp SSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCeEcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3569999999999888888999887766544
No 13
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=32.88 E-value=51 Score=19.93 Aligned_cols=32 Identities=6% Similarity=0.114 Sum_probs=25.2
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
....|+.+++..+.+.....+++++++.+...
T Consensus 36 ~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~ 67 (87)
T 1s6j_A 36 NSGTITFDELKDGLKRVGSELMESEIKDLMDA 67 (87)
T ss_dssp CSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34679999999999888888998887655443
No 14
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=31.63 E-value=77 Score=20.01 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=24.7
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
..-.|+.+++..+.+.....+++++++.+...
T Consensus 42 ~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~ 73 (94)
T 2kz2_A 42 GNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 73 (94)
T ss_dssp CCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34579999999998887888888887655443
No 15
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=30.96 E-value=37 Score=23.90 Aligned_cols=32 Identities=3% Similarity=0.106 Sum_probs=26.0
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
..-.|+.++++++.+-.-..++++|++.+.+.
T Consensus 98 ~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~ 129 (159)
T 3i5g_C 98 GQGLISSAEIRNVLKMLGERITEDQCNDIFTF 129 (159)
T ss_dssp SSSEECHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45679999999999888889999998766543
No 16
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=30.71 E-value=62 Score=19.84 Aligned_cols=32 Identities=6% Similarity=0.125 Sum_probs=24.8
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
....|+.+++..+.+.....+++++++.+...
T Consensus 33 ~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~ 64 (90)
T 1avs_A 33 GGGDISTKELGTVMRMLGQNPTKEELDAIIEE 64 (90)
T ss_dssp CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34579999999999888888888887665443
No 17
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=29.23 E-value=96 Score=18.93 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHH-----cCCCCChhHHHHHHHHH
Q 031809 57 SLEPPDVPRLAQT-----ARISLTPHEVEEFAPKI 86 (152)
Q Consensus 57 ~I~~E~v~~LA~L-----ArL~L~eeE~e~~~~~l 86 (152)
.|+.+++..+.+- ....+++++++.+...+
T Consensus 27 ~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~ 61 (93)
T 1k2h_A 27 KLSKKELKDLLQTELSSFLDVQKDADAVDKIMKEL 61 (93)
T ss_dssp SCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 7999999998875 56778888887766554
No 18
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=28.81 E-value=38 Score=23.66 Aligned_cols=32 Identities=6% Similarity=0.061 Sum_probs=25.4
Q ss_pred CCCCCCChhHHHHHHHHcCCCCChhHHHHHHH
Q 031809 53 TTRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (152)
Q Consensus 53 ~~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~ 84 (152)
...-.|+.++++++..-.-..++++|++.+..
T Consensus 97 d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~ 128 (153)
T 3i5g_B 97 DGQGFIPEDYLKDLLENMGDNFSKEEIKNVWK 128 (153)
T ss_dssp SCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHT
T ss_pred CCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHH
Confidence 34568999999999887777899998766543
No 19
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=28.66 E-value=86 Score=19.78 Aligned_cols=31 Identities=10% Similarity=0.147 Sum_probs=23.5
Q ss_pred CCCChhHHHHHHHH-----cCCCCChhHHHHHHHHH
Q 031809 56 SSLEPPDVPRLAQT-----ARISLTPHEVEEFAPKI 86 (152)
Q Consensus 56 ~~I~~E~v~~LA~L-----ArL~L~eeE~e~~~~~l 86 (152)
..|+.++++++.+- ....+++++++.+.+++
T Consensus 26 g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~ 61 (92)
T 3rm1_A 26 HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61 (92)
T ss_dssp TSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHH
Confidence 48999999998876 55567888877666543
No 20
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=26.23 E-value=1e+02 Score=20.38 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=25.2
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
..-.|+.+++.++..-....+++++++.+...
T Consensus 96 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 127 (148)
T 1exr_A 96 GNGLISAAELRHVMTNLGEKLTDDEVDEMIRE 127 (148)
T ss_dssp CSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34579999999998887788899887766554
No 21
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=25.68 E-value=66 Score=19.30 Aligned_cols=32 Identities=9% Similarity=0.183 Sum_probs=24.9
Q ss_pred CCCCChhHHHHHHHHcCCCCChhHHHHHHHHH
Q 031809 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (152)
Q Consensus 55 ~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l 86 (152)
...|+.+++..+.+.....+++++++.+...+
T Consensus 28 ~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 59 (85)
T 2ktg_A 28 DNKLTAEELGTVMRALGANPTKQKISEIVKDY 59 (85)
T ss_dssp CSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 45799999999988877888888876665543
No 22
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=25.60 E-value=72 Score=20.84 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=24.3
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~ 84 (152)
..-.|+.+++..+.+-....+++++++.+..
T Consensus 89 ~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~ 119 (143)
T 3j04_B 89 ASGFIHEDHLRELLTTMGDRFTDEEVDEMYR 119 (143)
T ss_dssp SCCCCCTTTHHHHHHTSSSCCCHHHHHHHHH
T ss_pred CCCeEcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 4567999999999988778889888755433
No 23
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=25.14 E-value=1.3e+02 Score=21.16 Aligned_cols=30 Identities=10% Similarity=0.135 Sum_probs=22.7
Q ss_pred CCCChhHHHHHHHHcCCCCChhHHHHHHHHHH
Q 031809 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (152)
Q Consensus 56 ~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~ 87 (152)
..|+++++..+.+.. .++++++..+...+.
T Consensus 14 g~l~~~el~~~~~~~--~~~~~~i~~~f~~~d 43 (207)
T 2d8n_A 14 GALSKEILEELQLNT--KFSEEELCSWYQSFL 43 (207)
T ss_dssp TCCCHHHHHHHHHHS--SCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHc--CCCHHHHHHHHHHHH
Confidence 369999999998754 468888877766554
No 24
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=24.78 E-value=84 Score=20.39 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=26.0
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l 86 (152)
....|+.+++..+.+-....+++++++.+...+
T Consensus 97 ~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 129 (147)
T 4ds7_A 97 GDGLISAAELKHVLTSIGEKLTDAEVDEMLREV 129 (147)
T ss_dssp CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 346799999999999888889998876665544
No 25
>3o0r_C Nitric oxide reductase subunit C; oxidoreductase, electron transport, heme, iron, membrane, CY membrane; HET: HEM HEC; 2.70A {Pseudomonas aeruginosa}
Probab=24.62 E-value=62 Score=22.21 Aligned_cols=22 Identities=9% Similarity=0.342 Sum_probs=17.1
Q ss_pred HHHHHHHHHHhhccCCCCCCCC
Q 031809 85 KIRQVIDWFGQLQDVDLDSVDP 106 (152)
Q Consensus 85 ~l~~Il~~~d~L~evDt~~VeP 106 (152)
++.+|+.|+..+..+++.+-+|
T Consensus 121 ei~~l~ayl~~l~~~~~~~wP~ 142 (146)
T 3o0r_C 121 QVDDLAEFLKWSSKIDTNQWPP 142 (146)
T ss_dssp HHHHHHHHHHHHTTSCCSSCSS
T ss_pred HHHHHHHHHHHhccCccCCCCC
Confidence 3577888888999999877654
No 26
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=24.38 E-value=43 Score=19.31 Aligned_cols=29 Identities=10% Similarity=0.171 Sum_probs=22.4
Q ss_pred CCCCChhHHHHHHHHcCCCCChhHHHHHH
Q 031809 55 RSSLEPPDVPRLAQTARISLTPHEVEEFA 83 (152)
Q Consensus 55 ~~~I~~E~v~~LA~LArL~L~eeE~e~~~ 83 (152)
...|+.+++..+.+.....+++++++.+.
T Consensus 20 ~G~i~~~el~~~l~~~~~~~~~~~~~~~~ 48 (71)
T 2b1u_A 20 DGHITVDELRRAMAGLGQPLPQEELDAMI 48 (71)
T ss_dssp SSEEEHHHHHHHGGGTTCSSCHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 45799999999988777788887765443
No 27
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=24.35 E-value=98 Score=20.52 Aligned_cols=32 Identities=6% Similarity=0.066 Sum_probs=25.9
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
..-.|+.+++..+.+-....+++++++.+...
T Consensus 98 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 129 (153)
T 2ovk_B 98 GQGFIPEDYLKDLLENMGDNFSKEEIKNVWKD 129 (153)
T ss_dssp CSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred CCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 45679999999999988888999887665544
No 28
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=24.35 E-value=80 Score=21.29 Aligned_cols=32 Identities=13% Similarity=0.215 Sum_probs=25.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
..-.|+.++++++..-.-..+++++++.+...
T Consensus 96 ~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~ 127 (148)
T 2lmt_A 96 GDGFISPAELRFVMINLGEKVTDEEIDEMIRE 127 (148)
T ss_dssp CSSEECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CcCcCcHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 45679999999998888888998887665443
No 29
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=24.31 E-value=71 Score=22.48 Aligned_cols=27 Identities=15% Similarity=0.190 Sum_probs=22.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhhccC
Q 031809 73 SLTPHEVEEFAPKIRQVIDWFGQLQDV 99 (152)
Q Consensus 73 ~L~eeE~e~~~~~l~~Il~~~d~L~ev 99 (152)
.|+++|.+.+..-+..+.+.++.+.+-
T Consensus 139 ~l~~~e~~~l~~~L~~l~~~l~~~~~~ 165 (166)
T 3deu_A 139 GISSEEIELLIKLIAKLEHNIMELHSH 165 (166)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 799999999999999999999887653
No 30
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=23.69 E-value=73 Score=20.76 Aligned_cols=31 Identities=10% Similarity=0.150 Sum_probs=23.1
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~ 84 (152)
..-.|+.+++.++.+-.-..+++++++.+..
T Consensus 89 ~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 119 (140)
T 1ggw_A 89 ATGMIGVGELRYVLTSLGEKLSNEEMDELLK 119 (140)
T ss_dssp CSSCCCHHHHHHHHHHHHSCSCHHHHHHHHH
T ss_pred CCCcEeHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 3457999999998887777788887665543
No 31
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=23.67 E-value=55 Score=19.18 Aligned_cols=31 Identities=10% Similarity=0.157 Sum_probs=23.5
Q ss_pred CCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 55 ~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
...|+.+++..+.+.....+++++++.+...
T Consensus 21 ~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 51 (77)
T 2joj_A 21 TGSIDYHELKVAMRALGFDVKKPEILELMNE 51 (77)
T ss_dssp SSEEEHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3569999999998888888888776655443
No 32
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=23.35 E-value=1e+02 Score=20.50 Aligned_cols=32 Identities=13% Similarity=0.207 Sum_probs=24.8
Q ss_pred CCCChhHHHHHHHH-----cCCCCChhHHHHHHHHHH
Q 031809 56 SSLEPPDVPRLAQT-----ARISLTPHEVEEFAPKIR 87 (152)
Q Consensus 56 ~~I~~E~v~~LA~L-----ArL~L~eeE~e~~~~~l~ 87 (152)
-.|+.++++++-+- ..-.+++++++.+.++++
T Consensus 27 G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D 63 (101)
T 3nso_A 27 YKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLD 63 (101)
T ss_dssp TEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHH
T ss_pred CEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhC
Confidence 57999999998863 235678888888877764
No 33
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=23.33 E-value=1.2e+02 Score=20.30 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=25.2
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
..-.|+.+++.++.+-....+++++++.+...
T Consensus 114 ~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 145 (169)
T 3qrx_A 114 NSGTITIKDLRRVAKELGENLTEEELQEMIAE 145 (169)
T ss_dssp CSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 44679999999999888888999887665443
No 34
>2e9x_A DNA replication complex GINS protein PSF1; eukaryotic DNA replication; HET: DNA; 2.30A {Homo sapiens} SCOP: a.278.1.1 PDB: 2eho_B*
Probab=23.00 E-value=1.3e+02 Score=21.58 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=26.9
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhhcc---CCCCC-CCC
Q 031809 72 ISLTPHEVEEFAPKIRQVIDWFGQLQD---VDLDS-VDP 106 (152)
Q Consensus 72 L~L~eeE~e~~~~~l~~Il~~~d~L~e---vDt~~-VeP 106 (152)
=.|+++|.+-+.+--+-+-+|+..+.+ +|+++ ..|
T Consensus 104 ~~LS~~E~~f~~~Y~~lL~~y~~~~~~~~~ldlt~~l~P 142 (149)
T 2e9x_A 104 FHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKP 142 (149)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHSSSSSCCCTTSCCSC
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCCCC
Confidence 468889998888888888889988874 77654 444
No 35
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=22.91 E-value=1e+02 Score=20.00 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=24.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
....|+.+++..+.+-....+++++++.+...
T Consensus 92 ~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 123 (142)
T 2bl0_C 92 GTGYIPKAALQDALLNLGDRLKPHEFAEFLGI 123 (142)
T ss_dssp SCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 44579999999999877778888886655433
No 36
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=22.76 E-value=1.1e+02 Score=18.69 Aligned_cols=31 Identities=6% Similarity=0.219 Sum_probs=28.0
Q ss_pred CCCChhHHHHHHHHcCCCCChhHHHHHHHHH
Q 031809 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (152)
Q Consensus 56 ~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l 86 (152)
..+|.++|++|.+-+-++.++.-...|.+.|
T Consensus 15 ~~~t~~~I~~il~aaGveve~~~~~~~~~~L 45 (58)
T 3a1y_A 15 KEINEENLKAVLQAAGVEPEEARIKALVAAL 45 (58)
T ss_dssp CCCCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence 4689999999999999999999998888876
No 37
>2lbf_B 60S acidic ribosomal protein P2; ribosome, stalk, P1/P2; NMR {Homo sapiens} PDB: 2w1o_A
Probab=22.66 E-value=83 Score=20.22 Aligned_cols=31 Identities=10% Similarity=0.258 Sum_probs=27.9
Q ss_pred CCChhHHHHHHHHcCCCCChhHHHHHHHHHH
Q 031809 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (152)
Q Consensus 57 ~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~ 87 (152)
.++.++|++|.+-+-++.+++-...|.+.|+
T Consensus 18 ~~ta~~I~~il~aaGvevd~~~~~~~~~aL~ 48 (70)
T 2lbf_B 18 SPSAKDIKKILDSVGIEADDDRLNKVISELN 48 (70)
T ss_dssp SCCHHHHHHHHHTTTCCCCTTHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHcCCCccHHHHHHHHHHHc
Confidence 6899999999999999999999988887763
No 38
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=22.47 E-value=1.3e+02 Score=19.87 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=24.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
..-.|+.++++++..-.-..+++++++.+..+
T Consensus 92 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 123 (143)
T 2obh_A 92 ETGKISFKNLKRVAKELGENLTDEELQEMIDE 123 (143)
T ss_dssp CSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34579999999998776677888887766543
No 39
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=21.33 E-value=28 Score=21.37 Aligned_cols=38 Identities=24% Similarity=0.336 Sum_probs=21.3
Q ss_pred CCCChhHHHHHHHHcC-CCCChhHHHHHHHHHHHHHHHH
Q 031809 56 SSLEPPDVPRLAQTAR-ISLTPHEVEEFAPKIRQVIDWF 93 (152)
Q Consensus 56 ~~I~~E~v~~LA~LAr-L~L~eeE~e~~~~~l~~Il~~~ 93 (152)
|.||+.+|..-.--.. =..+.+|++.|+.++.+-++-+
T Consensus 1 M~lTp~dI~~k~F~~~~rGY~~~EVD~FLd~v~~~~~~l 39 (57)
T 2wuj_A 1 MPLTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYEIV 39 (57)
T ss_dssp --CCHHHHTTCCCCEETTEEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhhCcCCCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 4466666654433222 2667888888877766555443
No 40
>1qa6_A Ribosomal protein L11; ribosomal RNA, tertiary structur,E RNA-protein interaction, minor groove binding, antibiotic binding; 2.80A {Geobacillus stearothermophilus} SCOP: a.4.7.1 PDB: 1c04_C
Probab=20.96 E-value=1.2e+02 Score=19.27 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=28.2
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQ 88 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~~ 88 (152)
..-.||.++|.+||+.-+-++.-.+++...+.+-.
T Consensus 26 ~vG~it~~qv~eIA~~K~~dl~a~~l~~a~k~I~G 60 (67)
T 1qa6_A 26 KVATIKRDKVREIAELKMPDLNAASIEAAMRMIEG 60 (67)
T ss_dssp CCCCCTTTHHHHHHHHHGGGCCCSSHHHHHHHHHH
T ss_pred ccceecHHHHHHHHHHHHHhhcccCHHHHHHHHHH
Confidence 44679999999999998888888888777666543
No 41
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=20.66 E-value=1.1e+02 Score=20.75 Aligned_cols=30 Identities=7% Similarity=0.145 Sum_probs=22.4
Q ss_pred CCChhHHHHHHHH-----cCCCCChhHHHHHHHHH
Q 031809 57 SLEPPDVPRLAQT-----ARISLTPHEVEEFAPKI 86 (152)
Q Consensus 57 ~I~~E~v~~LA~L-----ArL~L~eeE~e~~~~~l 86 (152)
.|+.++++.+.+- .-..+++++++.+..++
T Consensus 40 ~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~ 74 (113)
T 2lnk_A 40 KLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNL 74 (113)
T ss_dssp CBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHH
T ss_pred EECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHh
Confidence 7999999999863 23467888887776554
No 42
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=20.53 E-value=1.5e+02 Score=19.19 Aligned_cols=30 Identities=17% Similarity=0.119 Sum_probs=23.9
Q ss_pred CCCChhHHHHHHHHcCCCCChhHHHHHHHH
Q 031809 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (152)
Q Consensus 56 ~~I~~E~v~~LA~LArL~L~eeE~e~~~~~ 85 (152)
..|+.+++..+.+...+.++++++..+...
T Consensus 26 G~i~~~el~~~l~~~~~~~~~~~~~~l~~~ 55 (153)
T 3ox6_A 26 GYINCRDLGNCMRTMGYMPTEMELIELSQQ 55 (153)
T ss_dssp SSCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 568999999988887888888887776654
No 43
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=20.28 E-value=74 Score=20.04 Aligned_cols=30 Identities=7% Similarity=0.138 Sum_probs=24.3
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFA 83 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~ 83 (152)
....|+.+++..+.+-....+++++++.+.
T Consensus 37 ~~G~i~~~el~~~l~~~g~~~~~~e~~~l~ 66 (105)
T 1wlz_A 37 KTNTISREEFRAICNRRVQILTDEQFDRLW 66 (105)
T ss_dssp CSSCBCHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 346799999999998888889988876554
No 44
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=20.03 E-value=1.7e+02 Score=20.01 Aligned_cols=34 Identities=9% Similarity=0.239 Sum_probs=27.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCChhHHHHHHHHHH
Q 031809 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (152)
Q Consensus 54 ~~~~I~~E~v~~LA~LArL~L~eeE~e~~~~~l~ 87 (152)
..-.|+.+++..+.+-.-..+++++++.+...++
T Consensus 63 ~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D 96 (150)
T 2jjz_A 63 NEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVT 96 (150)
T ss_dssp TTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred CcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHC
Confidence 3457999999999888778899998887776554
Done!