Query 031810
Match_columns 152
No_of_seqs 146 out of 1798
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 08:42:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031810.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031810hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 7.3E-25 2.5E-29 145.9 9.6 127 10-142 33-160 (169)
2 4gpm_A Engineered protein OR26 99.9 6.8E-24 2.3E-28 141.2 12.6 98 8-111 64-161 (169)
3 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.2E-23 4.1E-28 126.6 8.9 92 13-110 1-92 (93)
4 2jab_A H10-2-G3; HER2, darpin, 99.9 4.3E-22 1.5E-26 127.6 9.6 95 11-111 11-105 (136)
5 1d9s_A Cyclin-dependent kinase 99.9 4E-22 1.4E-26 127.7 8.3 95 10-111 8-103 (136)
6 3f6q_A Integrin-linked protein 99.9 2.7E-21 9.3E-26 129.0 11.9 97 9-111 34-130 (179)
7 3c5r_A BARD-1, BRCA1-associate 99.9 1.8E-21 6E-26 124.7 9.8 96 10-111 6-101 (137)
8 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-21 5.6E-26 124.8 9.4 95 9-109 38-132 (137)
9 3f6q_A Integrin-linked protein 99.9 9.5E-21 3.2E-25 126.4 13.1 100 9-114 67-166 (179)
10 3aaa_C Myotrophin, protein V-1 99.9 2.5E-21 8.7E-26 121.9 9.8 95 11-111 4-98 (123)
11 3v31_A Ankyrin repeat family A 99.9 3.6E-21 1.2E-25 127.0 10.9 99 8-112 30-128 (167)
12 2y1l_E Darpin-8.4; hydrolase-i 99.9 8E-21 2.7E-25 125.7 12.6 97 9-111 42-138 (169)
13 4b93_B Ankyrin repeat domain-c 99.9 1E-21 3.6E-26 139.4 8.6 81 9-93 147-227 (269)
14 2l6b_A NR1C; ankyrin, consensu 99.9 9.8E-22 3.3E-26 122.3 7.2 96 10-111 5-100 (115)
15 1dcq_A PYK2-associated protein 99.9 3.5E-21 1.2E-25 137.3 11.1 97 9-111 164-263 (278)
16 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.8E-21 1.6E-25 125.6 10.8 98 8-112 32-129 (162)
17 3v30_A DNA-binding protein rfx 99.9 3.8E-21 1.3E-25 127.4 10.3 98 9-112 31-128 (172)
18 3twr_A Tankyrase-2; ankyrin re 99.9 6.7E-21 2.3E-25 125.4 10.9 99 8-112 36-134 (165)
19 1d9s_A Cyclin-dependent kinase 99.9 1.2E-21 4.3E-26 125.4 7.1 96 9-110 40-135 (136)
20 4b93_B Ankyrin repeat domain-c 99.9 5E-21 1.7E-25 135.9 10.9 79 10-92 82-160 (269)
21 2rfm_A Putative ankyrin repeat 99.9 7.8E-21 2.7E-25 128.1 11.0 94 11-110 65-158 (192)
22 2vge_A RELA-associated inhibit 99.8 9.8E-21 3.3E-25 131.5 11.7 98 10-111 50-148 (229)
23 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.4E-21 1.5E-25 125.8 9.4 97 9-110 65-161 (162)
24 1bd8_A P19INK4D CDK4/6 inhibit 99.8 9E-21 3.1E-25 123.6 10.7 93 9-108 31-123 (156)
25 1awc_B Protein (GA binding pro 99.8 5E-21 1.7E-25 124.7 9.4 97 10-112 30-126 (153)
26 1awc_B Protein (GA binding pro 99.8 1.3E-20 4.6E-25 122.7 11.2 90 10-105 63-152 (153)
27 3twr_A Tankyrase-2; ankyrin re 99.8 8.2E-21 2.8E-25 125.0 10.1 93 10-109 71-163 (165)
28 1bd8_A P19INK4D CDK4/6 inhibit 99.8 5.4E-21 1.8E-25 124.7 9.0 94 8-108 62-155 (156)
29 2zgd_A 3 repeat synthetic anky 99.8 2.8E-21 9.6E-26 119.7 7.2 91 9-105 19-109 (110)
30 3v30_A DNA-binding protein rfx 99.8 8.9E-21 3.1E-25 125.6 10.1 97 9-111 64-160 (172)
31 3aaa_C Myotrophin, protein V-1 99.8 5.9E-21 2E-25 120.2 8.6 81 8-92 34-114 (123)
32 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.4E-20 4.8E-25 118.1 10.2 93 13-111 1-93 (126)
33 2rfm_A Putative ankyrin repeat 99.8 1.6E-20 5.4E-25 126.5 10.5 133 9-147 30-163 (192)
34 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.4E-20 4.8E-25 124.5 9.6 94 9-108 75-168 (169)
35 3d9h_A CDNA FLJ77766, highly s 99.8 4.6E-20 1.6E-24 131.7 12.9 100 8-113 53-152 (285)
36 2jab_A H10-2-G3; HER2, darpin, 99.8 1.5E-20 5E-25 120.4 9.3 94 9-108 42-135 (136)
37 3v31_A Ankyrin repeat family A 99.8 1.3E-20 4.5E-25 124.3 9.3 97 9-111 64-160 (167)
38 1ycs_B 53BP2, P53BP2; ankyrin 99.8 9.3E-21 3.2E-25 132.1 8.8 91 13-109 36-126 (239)
39 3ui2_A Signal recognition part 99.8 2.9E-20 9.8E-25 130.1 10.5 95 10-108 73-182 (244)
40 1bi7_B P16INK4A, MTS1, multipl 99.8 2.2E-21 7.5E-26 127.0 4.5 129 10-145 8-138 (156)
41 3deo_A Signal recognition part 99.8 3.2E-20 1.1E-24 124.4 10.2 94 11-111 41-135 (183)
42 3t8k_A Uncharacterized protein 99.8 2.9E-21 1E-25 130.3 5.0 96 12-111 36-146 (186)
43 2xai_A ASB-9, ankyrin repeat a 99.8 5.8E-20 2E-24 129.4 11.8 95 10-111 32-126 (261)
44 2etb_A Transient receptor pote 99.8 2.8E-20 9.6E-25 130.4 9.9 107 4-112 80-207 (256)
45 3ehr_A Osteoclast-stimulating 99.8 2.1E-20 7.2E-25 128.6 9.1 90 13-108 72-162 (222)
46 2pnn_A Transient receptor pote 99.8 3.2E-20 1.1E-24 131.4 10.2 105 3-111 90-218 (273)
47 1oy3_D Transcription factor in 99.8 2.7E-20 9.4E-25 131.6 9.8 101 8-113 152-252 (282)
48 3jxi_A Vanilloid receptor-rela 99.8 1.9E-20 6.6E-25 131.4 9.0 103 5-111 84-210 (260)
49 1bi7_B P16INK4A, MTS1, multipl 99.8 1.4E-20 4.7E-25 123.1 7.6 98 8-112 39-137 (156)
50 4hbd_A KN motif and ankyrin re 99.8 3.2E-20 1.1E-24 132.1 9.9 93 11-109 180-273 (276)
51 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.1E-19 3.7E-24 114.0 11.2 96 9-110 30-125 (126)
52 1yyh_A HN1;, notch 1, ankyrin 99.8 6.1E-20 2.1E-24 128.7 11.0 95 11-111 121-215 (253)
53 3lvq_E ARF-GAP with SH3 domain 99.8 2.5E-20 8.5E-25 142.4 9.6 96 11-112 168-266 (497)
54 3t8k_A Uncharacterized protein 99.8 4.2E-20 1.4E-24 124.6 9.5 96 10-111 71-179 (186)
55 3hra_A Ankyrin repeat family p 99.8 2.6E-19 9E-24 121.0 13.3 97 9-111 34-131 (201)
56 3b7b_A Euchromatic histone-lys 99.8 1.5E-19 5E-24 125.1 12.3 95 10-110 7-101 (237)
57 1yyh_A HN1;, notch 1, ankyrin 99.8 3.9E-20 1.3E-24 129.7 9.4 97 9-111 152-248 (253)
58 2f8y_A Notch homolog 1, transl 99.8 7.4E-20 2.5E-24 125.6 10.5 124 10-139 88-212 (223)
59 3aji_A 26S proteasome non-ATPa 99.8 2.5E-19 8.7E-24 123.5 13.1 78 11-92 37-114 (231)
60 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.4E-20 8.2E-25 130.0 8.0 103 7-113 63-166 (239)
61 2rfa_A Transient receptor pote 99.8 1.4E-19 4.9E-24 124.9 11.8 98 10-111 71-183 (232)
62 2xai_A ASB-9, ankyrin repeat a 99.8 2.5E-19 8.5E-24 126.2 13.1 97 10-113 65-161 (261)
63 3jue_A Arfgap with coiled-coil 99.8 7E-20 2.4E-24 135.2 10.3 95 12-112 233-327 (368)
64 2b0o_E UPLC1; arfgap, structur 99.8 4.8E-20 1.6E-24 132.8 9.2 96 10-111 186-284 (301)
65 1ikn_D Protein (I-kappa-B-alph 99.8 1.1E-19 3.9E-24 125.9 10.8 96 10-111 113-209 (236)
66 3aji_A 26S proteasome non-ATPa 99.8 1.8E-19 6.1E-24 124.3 11.3 98 9-112 101-198 (231)
67 2dzn_A Probable 26S proteasome 99.8 1.4E-19 4.9E-24 124.4 10.5 93 11-109 69-163 (228)
68 1ikn_D Protein (I-kappa-B-alph 99.8 1.4E-19 4.9E-24 125.4 10.6 98 10-111 41-142 (236)
69 2vge_A RELA-associated inhibit 99.8 6E-20 2.1E-24 127.5 8.6 98 10-113 17-114 (229)
70 1oy3_D Transcription factor in 99.8 1.5E-19 5.2E-24 127.7 10.7 94 10-109 5-101 (282)
71 1s70_B 130 kDa myosin-binding 99.8 5.9E-19 2E-23 126.0 13.7 92 10-107 69-160 (299)
72 2f8y_A Notch homolog 1, transl 99.8 4.6E-19 1.6E-23 121.6 12.6 129 9-143 53-183 (223)
73 1k1a_A B-cell lymphoma 3-encod 99.8 1.7E-19 5.9E-24 124.9 10.4 98 9-112 111-209 (241)
74 3kea_A K1L; tropism, ANK repea 99.8 2.1E-19 7E-24 128.3 10.5 96 9-112 26-121 (285)
75 3utm_A Tankyrase-1; tankyrase, 99.8 2.4E-19 8.3E-24 130.0 10.8 100 7-112 51-150 (351)
76 1n11_A Ankyrin; clathrin, BAND 99.8 3.5E-19 1.2E-23 133.4 11.9 96 10-111 10-105 (437)
77 1k1a_A B-cell lymphoma 3-encod 99.8 7.8E-19 2.7E-23 121.6 12.7 95 10-110 5-103 (241)
78 3ljn_A Hypothetical protein; a 99.8 9.2E-20 3.2E-24 133.7 8.3 93 11-109 170-267 (364)
79 3ehr_A Osteoclast-stimulating 99.8 8.5E-20 2.9E-24 125.6 7.6 97 9-111 101-198 (222)
80 3d9h_A CDNA FLJ77766, highly s 99.8 8.2E-19 2.8E-23 125.2 12.9 92 11-109 122-213 (285)
81 3hra_A Ankyrin repeat family p 99.8 1.7E-19 6E-24 121.9 8.8 100 9-112 67-171 (201)
82 3jxi_A Vanilloid receptor-rela 99.8 7.7E-20 2.6E-24 128.3 7.2 96 12-111 138-250 (260)
83 2pnn_A Transient receptor pote 99.8 7.7E-20 2.6E-24 129.4 7.0 97 12-112 146-259 (273)
84 2dzn_A Probable 26S proteasome 99.8 7.1E-19 2.4E-23 120.9 11.7 90 11-106 104-194 (228)
85 2rfa_A Transient receptor pote 99.8 7.8E-19 2.7E-23 121.2 11.9 98 8-111 31-146 (232)
86 3deo_A Signal recognition part 99.8 6.8E-20 2.3E-24 122.8 6.2 81 9-93 71-152 (183)
87 3kea_A K1L; tropism, ANK repea 99.8 1E-19 3.4E-24 130.0 6.9 92 14-111 62-154 (285)
88 4hbd_A KN motif and ankyrin re 99.8 9.8E-19 3.4E-23 124.3 11.6 94 10-107 107-237 (276)
89 2etb_A Transient receptor pote 99.8 1.4E-19 4.6E-24 126.9 7.0 95 13-111 135-246 (256)
90 3ljn_A Hypothetical protein; a 99.8 2.6E-19 8.7E-24 131.4 8.7 97 10-112 134-237 (364)
91 1sw6_A Regulatory protein SWI6 99.8 3E-19 1E-23 129.8 8.5 96 10-109 127-228 (327)
92 1wdy_A 2-5A-dependent ribonucl 99.8 3.7E-18 1.3E-22 120.4 13.3 96 11-112 36-131 (285)
93 3b7b_A Euchromatic histone-lys 99.8 3.4E-18 1.2E-22 118.3 12.7 57 13-71 43-99 (237)
94 1n11_A Ankyrin; clathrin, BAND 99.8 2.4E-18 8.2E-23 128.9 12.6 96 10-111 43-138 (437)
95 3ui2_A Signal recognition part 99.8 1.3E-19 4.4E-24 126.8 5.3 94 12-112 43-137 (244)
96 3utm_A Tankyrase-1; tankyrase, 99.8 1.8E-18 6.2E-23 125.4 10.9 96 10-111 207-305 (351)
97 2fo1_E LIN-12 protein; beta-ba 99.8 1.2E-18 4.1E-23 128.6 9.3 95 10-110 275-370 (373)
98 1s70_B 130 kDa myosin-binding 99.8 3.2E-18 1.1E-22 122.1 11.2 79 10-92 195-273 (299)
99 1wdy_A 2-5A-dependent ribonucl 99.8 3.9E-18 1.3E-22 120.3 10.8 133 11-149 145-284 (285)
100 2fo1_E LIN-12 protein; beta-ba 99.8 4.1E-18 1.4E-22 125.8 10.3 99 9-111 161-263 (373)
101 4g8k_A 2-5A-dependent ribonucl 99.7 3.1E-18 1.1E-22 124.4 8.4 100 2-111 194-298 (337)
102 3eu9_A Huntingtin-interacting 99.7 1.2E-16 4.3E-21 110.0 13.2 97 10-111 38-134 (240)
103 1sw6_A Regulatory protein SWI6 99.7 9.7E-18 3.3E-22 121.8 7.7 49 40-92 276-324 (327)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.7 3.9E-17 1.3E-21 97.8 8.7 65 8-74 29-93 (93)
105 3eu9_A Huntingtin-interacting 99.7 1E-16 3.4E-21 110.5 11.5 99 9-112 4-102 (240)
106 4g8k_A 2-5A-dependent ribonucl 99.7 1.1E-16 3.7E-21 116.2 11.7 93 10-108 164-261 (337)
107 3lvq_E ARF-GAP with SH3 domain 99.7 1.8E-16 6.1E-21 121.1 11.1 124 15-144 133-266 (497)
108 3jue_A Arfgap with coiled-coil 99.7 1.1E-16 3.7E-21 118.2 9.2 96 13-112 198-294 (368)
109 2l6b_A NR1C; ankyrin, consensu 99.7 2.1E-17 7.1E-22 102.6 4.1 78 7-88 35-112 (115)
110 2b0o_E UPLC1; arfgap, structur 99.6 6.2E-16 2.1E-20 111.3 9.3 93 14-112 151-252 (301)
111 1dcq_A PYK2-associated protein 99.6 3.8E-15 1.3E-19 106.1 10.8 92 15-112 131-231 (278)
112 2aja_A Ankyrin repeat family p 99.6 5.4E-17 1.8E-21 120.2 -3.0 91 11-108 125-221 (376)
113 2zgd_A 3 repeat synthetic anky 99.5 6.8E-14 2.3E-18 86.1 7.9 58 9-68 52-109 (110)
114 2aja_A Ankyrin repeat family p 99.5 4E-15 1.4E-19 110.1 0.4 96 11-111 89-188 (376)
115 1gp8_A Protein (scaffolding pr 42.9 23 0.00079 16.8 2.3 18 18-35 17-34 (40)
116 3zrh_A Ubiquitin thioesterase 27.8 1E+02 0.0036 23.1 4.8 50 22-71 30-91 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=7.3e-25 Score=145.89 Aligned_cols=127 Identities=33% Similarity=0.445 Sum_probs=99.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|.+|.||||+|+..++.++++.|++.|++++.++.. |+||||+|+..|+.+++++|+++|+++ +.+|..|+||||
T Consensus 33 ~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~--g~TpLh~A~~~g~~~~v~~Ll~~gadv--n~~d~~G~TpLh 108 (169)
T 4gpm_A 33 SDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD--GRTPLHHAAENGHKEVVKLLISKGADV--NAKDSDGRTPLH 108 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccC--CCCHHHHHHHcCCHHHHHHHHHCcCCC--CCCCCCCCCHHH
Confidence 4899999999999999999999999999999999887 999999999999999999999999988 889999999999
Q ss_pred ccccchhhHHHHHHHHHHhhcCCCc-cCCchhhhHHHHHHhhhhhHHHhhhcCC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSAGET-SYSSEKLNALSRLLVHMMPLLWLDLASD 142 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (152)
+|+ ..++.+++++|.+.+.+... ...+......+....+...+.++...+.
T Consensus 109 ~A~--~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 109 HAA--ENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HHH--HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHH--HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 998 44457899999888765432 2233333333334445555555555444
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.91 E-value=6.8e-24 Score=141.21 Aligned_cols=98 Identities=39% Similarity=0.582 Sum_probs=87.8
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
+.+|.+|+||||+|+..|+.+++++|++.|++++.++.. |+||||+|+..|+.+++++|+++|+++ +.+|..|+||
T Consensus 64 ~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~--G~TpLh~A~~~g~~~~v~~Ll~~gad~--~~~d~~G~Tp 139 (169)
T 4gpm_A 64 NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD--GRTPLHHAAENGHKEVVKLLISKGADV--NTSDSDGRTP 139 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCH
T ss_pred hhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCCH
Confidence 335899999999999999999999999999999999988 999999999999999999999999988 8899999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
||+|+ ..++.+++++|.+.+.+
T Consensus 140 L~~A~--~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 140 LDLAR--EHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp HHHHH--HTTCHHHHHHHHTC---
T ss_pred HHHHH--HcCCHHHHHHHHHCCCC
Confidence 99998 44557899999987754
No 3
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=1.2e-23 Score=126.56 Aligned_cols=92 Identities=43% Similarity=0.657 Sum_probs=83.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 031810 13 KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 92 (152)
Q Consensus 13 ~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~a~ 92 (152)
+|+||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.+|..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN--GRTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHH
Confidence 4899999999999999999999999999999888 999999999999999999999999988 889999999999998
Q ss_pred cchhhHHHHHHHHHHhhc
Q 031810 93 SLEWAYEEMMRFQRESFS 110 (152)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~ 110 (152)
. .++.+++++|.+.+.
T Consensus 77 ~--~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 77 R--NGHLEVVKLLLEAGA 92 (93)
T ss_dssp H--TTCHHHHHHHHHTTC
T ss_pred H--cCCHHHHHHHHHcCC
Confidence 4 445789999887653
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=4.3e-22 Score=127.56 Aligned_cols=95 Identities=27% Similarity=0.282 Sum_probs=73.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 90 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~ 90 (152)
...|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +..+..|.||||+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~ 86 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEY--GLTPLYLATAHGHLEIVEVLLKNGADV--NAVDAIGFTPLHL 86 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCCHHHH
Confidence 455778888888888888888888888888877766 888888888888888888888888876 7777888888888
Q ss_pred cccchhhHHHHHHHHHHhhcC
Q 031810 91 CPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 91 a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+ ..++.+++++|.+.+..
T Consensus 87 A~--~~~~~~~v~~Ll~~g~~ 105 (136)
T 2jab_A 87 AA--FIGHLEIAEVLLKHGAD 105 (136)
T ss_dssp HH--HHTCHHHHHHHHHTTCC
T ss_pred HH--HcCCHHHHHHHHHcCCC
Confidence 87 34446777777776544
No 5
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.87 E-value=4e-22 Score=127.72 Aligned_cols=95 Identities=21% Similarity=0.273 Sum_probs=87.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCC-CCCcc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSR-FNPPL 88 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~-g~tpl 88 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+. ++.+++++|+++|+++ +.++.. |.|||
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~-~~~~~v~~Ll~~g~~~--~~~~~~~g~t~L 82 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRF--GRRPIQVMMM-GSAQVAELLLLHGAEP--NCADPATLTRPV 82 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCTTTTTSTT-SCHHHHHHHHHHTCCS--SCCBTTTTBCHH
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCC--CCCHHHHHHc-CCHHHHHHHHHCCCCC--CCcCCCCCCCHH
Confidence 4889999999999999999999999999999998887 9999999999 9999999999999988 889999 99999
Q ss_pred cccccchhhHHHHHHHHHHhhcC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+|+ ..++.+++++|.+.+..
T Consensus 83 ~~A~--~~~~~~~v~~Ll~~ga~ 103 (136)
T 1d9s_A 83 HDAA--REGFLDTLVVLHRAGAR 103 (136)
T ss_dssp HHHH--HHTCHHHHHHHHHTCCC
T ss_pred HHHH--HcCCHHHHHHHHHcCCC
Confidence 9999 44557899999987655
No 6
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.86 E-value=2.7e-21 Score=129.04 Aligned_cols=97 Identities=29% Similarity=0.453 Sum_probs=85.3
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.++..|.|||
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~d~~g~t~L 109 (179)
T 3f6q_A 34 QGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRG--DDTPLHLAASHGHRDIVQKLLQYKADI--NAVNEHGNVPL 109 (179)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHH
Confidence 35888999999999999999999999999999988887 999999999999999999999999987 88899999999
Q ss_pred cccccchhhHHHHHHHHHHhhcC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+|+. .++.+++++|.+.+..
T Consensus 110 ~~A~~--~~~~~~v~~Ll~~ga~ 130 (179)
T 3f6q_A 110 HYACF--WGQDQVAEDLVANGAL 130 (179)
T ss_dssp HHHHH--TTCHHHHHHHHHTTCC
T ss_pred HHHHH--cCCHHHHHHHHHCCCC
Confidence 99984 3447888888887655
No 7
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=1.8e-21 Score=124.69 Aligned_cols=96 Identities=24% Similarity=0.474 Sum_probs=87.6
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.||||
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~ 81 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHA--GWTPLHEACNHGHLKVVELLLQHKALV--NTTGYQNDSPLH 81 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCGGGCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCcc--cCcCCCCCCHHH
Confidence 4889999999999999999999999999999998887 999999999999999999999999988 889999999999
Q ss_pred ccccchhhHHHHHHHHHHhhcC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+|+. .++.+++++|.+.+..
T Consensus 82 ~A~~--~~~~~~v~~Ll~~ga~ 101 (137)
T 3c5r_A 82 DAAK--NGHVDIVKLLLSYGAS 101 (137)
T ss_dssp HHHH--TTCHHHHHHHHHTTCC
T ss_pred HHHH--cCCHHHHHHHHHcCCC
Confidence 9984 4457899999887654
No 8
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=1.6e-21 Score=124.84 Aligned_cols=95 Identities=26% Similarity=0.369 Sum_probs=83.3
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.+|..|.|||
T Consensus 38 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl 113 (137)
T 3c5r_A 38 VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQ--NDSPLHDAAKNGHVDIVKLLLSYGASR--NAVNIFGLRPV 113 (137)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGG--GCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCGG
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHH
Confidence 35889999999999999999999999999999999888 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhh
Q 031810 89 HYCPSLEWAYEEMMRFQRESF 109 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~ 109 (152)
++|+ ..+..++++++.+..
T Consensus 114 ~~A~--~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 114 DYTD--DESMKSLLLLPEKNE 132 (137)
T ss_dssp GGCC--CHHHHHHHSCC----
T ss_pred HHHh--hccHHHHHhhccccc
Confidence 9998 555567776665543
No 9
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.86 E-value=9.5e-21 Score=126.40 Aligned_cols=100 Identities=27% Similarity=0.266 Sum_probs=91.6
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +..+..|.|||
T Consensus 67 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl 142 (179)
T 3f6q_A 67 VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEH--GNVPLHYACFWGQDQVAEDLVANGALV--SICNKYGEMPV 142 (179)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCS--SBCCTTSCCGG
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCc--chhccCCCCcH
Confidence 34889999999999999999999999999999999887 999999999999999999999999988 89999999999
Q ss_pred cccccchhhHHHHHHHHHHhhcCCCc
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSAGET 114 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~~~~ 114 (152)
++|+ .....+++++|.+.+.....
T Consensus 143 ~~A~--~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 143 DKAK--APLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp GGSC--HHHHHHHHHHHHHTTCCCSC
T ss_pred HHHH--HHHHHHHHHHHHHhhcCccc
Confidence 9998 56668899999998876543
No 10
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=2.5e-21 Score=121.86 Aligned_cols=95 Identities=22% Similarity=0.274 Sum_probs=80.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 90 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~ 90 (152)
+..|.||||+|+..|+.++++.|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.+|..|.||||+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEG--GRKPLHYAADCGQLEILEFLLLKGADI--NAPDKHHITPLLS 79 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTT--SSCHHHHHHHTTCHHHHHHHHTTTCCT--TCCCTTSCCHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCC--CCcHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCCHHHH
Confidence 567889999999999999999999999999888877 899999999999999999999999987 8889999999999
Q ss_pred cccchhhHHHHHHHHHHhhcC
Q 031810 91 CPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 91 a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+ ..++.+++++|.+.+..
T Consensus 80 A~--~~~~~~~v~~Ll~~ga~ 98 (123)
T 3aaa_C 80 AV--YEGHVSCVKLLLSKGAD 98 (123)
T ss_dssp HH--HHTCHHHHHHHHHTTCC
T ss_pred HH--HcCCHHHHHHHHHcCCC
Confidence 98 44457888888887654
No 11
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.86 E-value=3.6e-21 Score=126.96 Aligned_cols=99 Identities=26% Similarity=0.308 Sum_probs=88.2
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
+.+|..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|++.|+++ +..+..|.||
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~ 105 (167)
T 3v31_A 30 NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG--RESALSLACSKGYTDIVKMLLDCGVDV--NEYDWNGGTP 105 (167)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHHTCHHHHHHHHHHTCCT--TCCCTTSCCH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC--CCcHHHHHHHcCCHHHHHHHHHCCCCC--CcCCCCCCCH
Confidence 335889999999999999999999999999999988877 999999999999999999999999988 8899999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcCC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
||+|+. .+..+++++|.+.+...
T Consensus 106 L~~A~~--~~~~~~v~~Ll~~g~~~ 128 (167)
T 3v31_A 106 LLYAVH--GNHVKCVKMLLESGADP 128 (167)
T ss_dssp HHHHHH--TTCHHHHHHHHHTTCCT
T ss_pred HHHHHH--cCCHHHHHHHHHcCCCC
Confidence 999984 44578999998876553
No 12
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.86 E-value=8e-21 Score=125.73 Aligned_cols=97 Identities=38% Similarity=0.539 Sum_probs=86.6
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.|||
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L 117 (169)
T 2y1l_E 42 AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHA--GMTPLRLAALFGHLEIVEVLLKNGADV--NANDMEGHTPL 117 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHH
Confidence 34888999999999999999999999999999988887 999999999999999999999999988 88899999999
Q ss_pred cccccchhhHHHHHHHHHHhhcC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+|+. .++.+++++|.+.+..
T Consensus 118 ~~A~~--~~~~~~v~~Ll~~g~~ 138 (169)
T 2y1l_E 118 HLAAM--FGHLEIVEVLLKNGAD 138 (169)
T ss_dssp HHHHH--TTCHHHHHHHHHTTCC
T ss_pred HHHHH--cCCHHHHHHHHHcCCC
Confidence 99984 4457899999887655
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.86 E-value=1e-21 Score=139.41 Aligned_cols=81 Identities=32% Similarity=0.474 Sum_probs=66.5
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 147 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~--g~t~Lh~A~~~g~~~~v~~Ll~~Gad~--~~~d~~G~TpL 222 (269)
T 4b93_B 147 KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNK--GNTALHEAVIEKHVFVVELLLLHGASV--QVLNKRQRTAV 222 (269)
T ss_dssp CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTT--SCBHHHHHHHTTCHHHHHHHHHTTCCS--CCCCTTSCCSG
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccC--CCcHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHH
Confidence 34778888888888888888888888888888887776 888888888888888888888888877 77888888888
Q ss_pred ccccc
Q 031810 89 HYCPS 93 (152)
Q Consensus 89 ~~a~~ 93 (152)
|+|+.
T Consensus 223 ~~A~~ 227 (269)
T 4b93_B 223 DCAEQ 227 (269)
T ss_dssp GGSCT
T ss_pred HHHHh
Confidence 88873
No 14
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=9.8e-22 Score=122.34 Aligned_cols=96 Identities=36% Similarity=0.524 Sum_probs=88.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|.+|.||||+|+..|+.++++.|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.||||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~d~~g~tpl~ 80 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD--GNTPLHLAAKNGHAEIVKLLLAKGADV--NARSKDGNTPEH 80 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSS--SCCTTHHHHTTTCHHHHHHHTTTTCCT--TCCCTTCCCTTH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHcCcHHHHHHHHHcCCCC--cccCCCCCCHHH
Confidence 5889999999999999999999999999999998887 999999999999999999999999988 889999999999
Q ss_pred ccccchhhHHHHHHHHHHhhcC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+|+.. ++.+++++|.+.+.+
T Consensus 81 ~A~~~--~~~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 81 LAKKN--GHHEIVKLLDAKGAD 100 (115)
T ss_dssp HHHTT--TCHHHHHHHHTTSSS
T ss_pred HHHHC--CCHHHHHHHHHcCCC
Confidence 99844 457899999987655
No 15
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=3.5e-21 Score=137.30 Aligned_cols=97 Identities=23% Similarity=0.361 Sum_probs=89.0
Q ss_pred CCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCC
Q 031810 9 GPKSKGVTPLHLAAQG---GHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFN 85 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~---g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~ 85 (152)
..|..|.||||+|+.. |+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|.
T Consensus 164 ~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~--g~TpLh~A~~~g~~~~v~~Ll~~gad~--~~~d~~g~ 239 (278)
T 1dcq_A 164 NGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGK--GSTALHYCCLTDNAECLKLLLRGKASI--EIANESGE 239 (278)
T ss_dssp SCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSC
T ss_pred ccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCccCCCC
Confidence 3478899999999998 8999999999999999999988 999999999999999999999999988 89999999
Q ss_pred CcccccccchhhHHHHHHHHHHhhcC
Q 031810 86 PPLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 86 tpl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
||||+|+. .++.+++++|.+.+..
T Consensus 240 tpL~~A~~--~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 240 TPLDIAKR--LKHEHCEELLTQALSG 263 (278)
T ss_dssp CHHHHHHH--TTCHHHHHHHHHHHTT
T ss_pred CHHHHHHH--cCCHHHHHHHHHcCCC
Confidence 99999984 4457899999988765
No 16
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.86 E-value=4.8e-21 Score=125.60 Aligned_cols=98 Identities=26% Similarity=0.342 Sum_probs=88.4
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
+.+|..|.||||+|+. |+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.||
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~ 106 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT--GFAVIHDAARAGFLDTLQTLLEFQADV--NIEDNEGNLP 106 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCH
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCH
Confidence 3458899999999999 9999999999999999998887 999999999999999999999999988 8899999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcCC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
||+|+ ..++.+++++|.+.+...
T Consensus 107 L~~A~--~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 107 LHLAA--KEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp HHHHH--HTTCHHHHHHHHHHSCCC
T ss_pred HHHHH--HcCCHHHHHHHHHccCCC
Confidence 99998 444578999999887764
No 17
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=3.8e-21 Score=127.41 Aligned_cols=98 Identities=26% Similarity=0.250 Sum_probs=88.3
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +..+..|.|||
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L 106 (172)
T 3v30_A 31 KPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKE--RESALSLASTGGYTDIVGLLLERDVDI--NIYDWNGGTPL 106 (172)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHTTTCCT--TCCCTTSCCHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhccc--CCCHHHHHHHCCCHHHHHHHHHcCCCC--CCCCCCCCCHH
Confidence 35889999999999999999999999999999998887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhhcCC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
|+|+. .+..+++++|.+.+...
T Consensus 107 ~~A~~--~~~~~~v~~Ll~~ga~~ 128 (172)
T 3v30_A 107 LYAVR--GNHVKCVEALLARGADL 128 (172)
T ss_dssp HHHHH--TTCHHHHHHHHHTTCCT
T ss_pred HHHHH--cCCHHHHHHHHHcCCCc
Confidence 99984 44578999998876553
No 18
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.85 E-value=6.7e-21 Score=125.42 Aligned_cols=99 Identities=29% Similarity=0.442 Sum_probs=87.8
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
+..+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +..+..|.||
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~ 111 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG--GLVPLHNACSYGHYEVAELLVKHGAVV--NVADLWKFTP 111 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCH
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCC--CCCHHHHHHHcCcHHHHHHHHhCCCCC--CCcCCCCCCH
Confidence 345788999999999999999999999999999998887 999999999999999999999999988 8899999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcCC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
||+|+. .++.+++++|.+.+...
T Consensus 112 L~~A~~--~~~~~~v~~Ll~~ga~~ 134 (165)
T 3twr_A 112 LHEAAA--KGKYEICKLLLQHGADP 134 (165)
T ss_dssp HHHHHH--TTCHHHHHHHHHTTCCT
T ss_pred HHHHHH--cCCHHHHHHHHHcCCCC
Confidence 999984 44578999998886553
No 19
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=1.2e-21 Score=125.39 Aligned_cols=96 Identities=23% Similarity=0.329 Sum_probs=85.7
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+. ++.+++++|++.|++++..+... |+||||+|+..++.+++++|+++|+++ +.++..|.|||
T Consensus 40 ~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~tpl 115 (136)
T 1d9s_A 40 ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPAT-LTRPVHDAAREGFLDTLVVLHRAGARL--DVCDAWGRLPV 115 (136)
T ss_dssp CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTT-TBCHHHHHHHHTCHHHHHHHHHTCCCC--CCCSSSSSCHH
T ss_pred CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHH
Confidence 358899999999999 99999999999999999876531 689999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhhc
Q 031810 89 HYCPSLEWAYEEMMRFQRESFS 110 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~ 110 (152)
|+|+ ..++.+++++|.+.+.
T Consensus 116 ~~A~--~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 116 DLAE--EQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHH--HHTCHHHHHHHHHHHC
T ss_pred HHHH--HcCCHHHHHHHHHcCC
Confidence 9998 4445789999988764
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.85 E-value=5e-21 Score=135.89 Aligned_cols=79 Identities=32% Similarity=0.492 Sum_probs=43.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|.+|+||||+|+..|+.+++++|++.|++++..+.. |.||+|+|+..++.+++++|++.|+++ +.+|..|.||||
T Consensus 82 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~--g~t~l~~a~~~~~~~~~~~Ll~~g~~~--n~~d~~g~TpL~ 157 (269)
T 4b93_B 82 TSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNAD--QAVPLHLACQQGHFQVVKCLLDSNAKP--NKKDLSGNTPLI 157 (269)
T ss_dssp CCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTT--CCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTCCCHHH
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCC--CCCccccccccChHHHHHHHHHCCCCC--CCCCCCCCCHHH
Confidence 3677777777777777777777666666555554443 444444444444444444444444443 344444444444
Q ss_pred ccc
Q 031810 90 YCP 92 (152)
Q Consensus 90 ~a~ 92 (152)
+|+
T Consensus 158 ~A~ 160 (269)
T 4b93_B 158 YAC 160 (269)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 21
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.85 E-value=7.8e-21 Score=128.05 Aligned_cols=94 Identities=23% Similarity=0.310 Sum_probs=60.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 90 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~ 90 (152)
|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.||||+
T Consensus 65 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~ 140 (192)
T 2rfm_A 65 DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFS--GKTPLMWSIIFGYSEMSYFLLEHGANV--NDRNLEGETPLIV 140 (192)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTCCCHHHH
T ss_pred cccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--CCcHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHH
Confidence 556666666666666666666666666666666655 666666666666666666666666655 5666666666666
Q ss_pred cccchhhHHHHHHHHHHhhc
Q 031810 91 CPSLEWAYEEMMRFQRESFS 110 (152)
Q Consensus 91 a~~~~~~~~~~~~~l~~~~~ 110 (152)
|+ ..++.+++++|.+.+.
T Consensus 141 A~--~~~~~~~v~~Ll~~ga 158 (192)
T 2rfm_A 141 AS--KYGRSEIVKKLLELGA 158 (192)
T ss_dssp HH--HHTCHHHHHHHHHTTC
T ss_pred HH--HcCCHHHHHHHHHCCC
Confidence 66 3333566666665543
No 22
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.85 E-value=9.8e-21 Score=131.45 Aligned_cols=98 Identities=26% Similarity=0.459 Sum_probs=80.9
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCC-CCCCCcc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDIND-SRFNPPL 88 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~-~~g~tpl 88 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|++.|+++ +..+ ..|.|||
T Consensus 50 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~--g~tpLh~A~~~g~~~~v~~Ll~~ga~~--~~~~~~~g~tpL 125 (229)
T 2vge_A 50 PNEEGITALHNAICGANYSIVDFLITAGANVNSPDSH--GWTPLHCAASCNDTVICMALVQHGAAI--FATTLSDGATAF 125 (229)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHTTTCCT--TCCCSSTTCCTG
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--ccccCCCCCCHH
Confidence 4788999999999999999999999999998888877 889999999999999999999999877 6664 6889999
Q ss_pred cccccchhhHHHHHHHHHHhhcC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+|+....+..+++++|.+.+.+
T Consensus 126 ~~A~a~~~~~~~~v~~Ll~~ga~ 148 (229)
T 2vge_A 126 EKCDPYREGYADCATYLADVEQS 148 (229)
T ss_dssp GGCCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhcChHHHHHHHHHcCCC
Confidence 99822255667888888887654
No 23
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.85 E-value=4.4e-21 Score=125.80 Aligned_cols=97 Identities=25% Similarity=0.328 Sum_probs=86.8
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|++. .+..+..|.|||
T Consensus 65 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~t~l 141 (162)
T 1ihb_A 65 LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNE--GNLPLHLAAKEGHLRVVEFLVKHTASN-VGHRNHKGDTAC 141 (162)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHHSCCC-TTCCCTTSCCHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHccCCC-CCCcCCCCCcHH
Confidence 35889999999999999999999999999999999887 999999999999999999999999972 278899999999
Q ss_pred cccccchhhHHHHHHHHHHhhc
Q 031810 89 HYCPSLEWAYEEMMRFQRESFS 110 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~ 110 (152)
|+|+ ..++.+++++|.+.+.
T Consensus 142 ~~A~--~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 142 DLAR--LYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHH--HTTCHHHHHHHHHTC-
T ss_pred HHHH--HcCCHHHHHHHHHhCC
Confidence 9998 4455789999988654
No 24
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.85 E-value=9e-21 Score=123.64 Aligned_cols=93 Identities=23% Similarity=0.339 Sum_probs=85.5
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+ +..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|++.|+++ +.++..|.|||
T Consensus 31 ~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L 105 (156)
T 1bd8_A 31 ALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTS--GTSPVHDAARTGFLDTLKVLVEHGADV--NVPDGTGALPI 105 (156)
T ss_dssp CCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCS--CCCCTTSCCHH
T ss_pred ccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC--CCCHHHHHHHcCcHHHHHHHHHcCCCC--CCcCCCCCcHH
Confidence 358899999999 9999999999999999999998887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHh
Q 031810 89 HYCPSLEWAYEEMMRFQRES 108 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~ 108 (152)
|+|+ ..++.+++++|.+.
T Consensus 106 ~~A~--~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 106 HLAV--QEGHTAVVSFLAAE 123 (156)
T ss_dssp HHHH--HHTCHHHHHHHHTT
T ss_pred HHHH--HhChHHHHHHHHhc
Confidence 9999 44557899999887
No 25
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=5e-21 Score=124.72 Aligned_cols=97 Identities=35% Similarity=0.444 Sum_probs=88.4
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
.|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.++..|.||||
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~ 105 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV--DRTPLHMAASEGHANIVEVLLKHGADV--NAKDMLKMTALH 105 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT--CCCHHHHHHHHTCHHHHHHHHTTTCCT--TCCCTTSCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcChHHHHHHHHHcCCCC--CCCCCCCCCHHH
Confidence 4788999999999999999999999999999998887 999999999999999999999999988 889999999999
Q ss_pred ccccchhhHHHHHHHHHHhhcCC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
+|+. .++.+++++|.+.+...
T Consensus 106 ~A~~--~~~~~~v~~Ll~~ga~~ 126 (153)
T 1awc_B 106 WATE--HNHQEVVELLIKYGADV 126 (153)
T ss_dssp HHHH--TTCHHHHHHHHHTTCCT
T ss_pred HHHH--cCCHHHHHHHHHcCCCc
Confidence 9984 44578999999886553
No 26
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=1.3e-20 Score=122.68 Aligned_cols=90 Identities=29% Similarity=0.430 Sum_probs=53.9
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.++..|.||||
T Consensus 63 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~ 138 (153)
T 1awc_B 63 RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDML--KMTALHWATEHNHQEVVELLIKYGADV--HTQSKFCKTAFD 138 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCCHHH
Confidence 3555666666666666666666666666666665555 666666666666666666666666655 555666666666
Q ss_pred ccccchhhHHHHHHHH
Q 031810 90 YCPSLEWAYEEMMRFQ 105 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l 105 (152)
+|+ ..++.+++++|
T Consensus 139 ~A~--~~~~~~i~~~L 152 (153)
T 1awc_B 139 ISI--DNGNEDLAEIL 152 (153)
T ss_dssp HHH--HTTCHHHHHHH
T ss_pred HHH--HcCCHHHHHHh
Confidence 665 22334555544
No 27
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.85 E-value=8.2e-21 Score=125.01 Aligned_cols=93 Identities=29% Similarity=0.429 Sum_probs=72.6
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.++..|.||||
T Consensus 71 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~ 146 (165)
T 3twr_A 71 KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLW--KFTPLHEAAAKGKYEICKLLLQHGADP--TKKNRDGNTPLD 146 (165)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCTGG
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCChhH
Confidence 4777888888888888888888888888888877776 888888888888888888888888876 778888888888
Q ss_pred ccccchhhHHHHHHHHHHhh
Q 031810 90 YCPSLEWAYEEMMRFQRESF 109 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~ 109 (152)
+|.. ++.+++++|.+.+
T Consensus 147 ~a~~---~~~~i~~~L~~~g 163 (165)
T 3twr_A 147 LVKD---GDTDIQDLLRGDA 163 (165)
T ss_dssp GSCT---TCHHHHHHHHTC-
T ss_pred hHhc---CChHHHHHHhhcc
Confidence 8763 2357777776543
No 28
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.85 E-value=5.4e-21 Score=124.72 Aligned_cols=94 Identities=28% Similarity=0.435 Sum_probs=85.1
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
+.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|++. +++ +.++..|.||
T Consensus 62 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~-~~~--~~~~~~g~t~ 136 (156)
T 1bd8_A 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT--GALPIHLAVQEGHTAVVSFLAAE-SDL--HRRDARGLTP 136 (156)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT--SCCHHHHHHHHTCHHHHHHHHTT-SCT--TCCCTTSCCH
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC--CCcHHHHHHHhChHHHHHHHHhc-cCC--CCcCCCCCCH
Confidence 335889999999999999999999999999999999887 99999999999999999999999 877 8899999999
Q ss_pred ccccccchhhHHHHHHHHHHh
Q 031810 88 LHYCPSLEWAYEEMMRFQRES 108 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~ 108 (152)
||+|+ ..++.+++++|.+.
T Consensus 137 l~~A~--~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 137 LELAL--QRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHH--HSCCHHHHHHHHTT
T ss_pred HHHHH--HcCcHHHHHHHHhh
Confidence 99998 44457899888764
No 29
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.84 E-value=2.8e-21 Score=119.68 Aligned_cols=91 Identities=29% Similarity=0.356 Sum_probs=81.4
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
..|.+|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.+|..|.|||
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~--g~tpLh~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~tpl 94 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN--GSTPLHLAARNGHLEVVKLLLEAGADV--XAQDKFGKTAF 94 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccccCCCcHH
Confidence 35788999999999999999999999999999999887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHH
Q 031810 89 HYCPSLEWAYEEMMRFQ 105 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l 105 (152)
|+|+ ..++.+++++|
T Consensus 95 ~~A~--~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISI--DNGNEDLAEIL 109 (110)
T ss_dssp HHHH--HHTCHHHHHHH
T ss_pred HHHH--HcCCHHHHHHh
Confidence 9998 44457788776
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=8.9e-21 Score=125.61 Aligned_cols=97 Identities=24% Similarity=0.320 Sum_probs=88.9
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.|||
T Consensus 64 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l 139 (172)
T 3v30_A 64 ILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWN--GGTPLLYAVRGNHVKCVEALLARGADL--TTEADSGYTPM 139 (172)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred hhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCCHH
Confidence 34889999999999999999999999999999999887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhhcC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+|+ ..++.+++++|.+....
T Consensus 140 ~~A~--~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 140 DLAV--ALGYRKVQQVIENHILK 160 (172)
T ss_dssp HHHH--HHTCHHHHHHHHHHHHH
T ss_pred HHHH--HhCcHHHHHHHHHHHHH
Confidence 9998 44457899999888765
No 31
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=5.9e-21 Score=120.17 Aligned_cols=81 Identities=32% Similarity=0.414 Sum_probs=76.6
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
+.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.++..|.||
T Consensus 34 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~--g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~ 109 (123)
T 3aaa_C 34 NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH--HITPLLSAVYEGHVSCVKLLLSKGADK--TVKGPDGLTA 109 (123)
T ss_dssp TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCH
Confidence 345889999999999999999999999999999999887 999999999999999999999999988 8899999999
Q ss_pred ccccc
Q 031810 88 LHYCP 92 (152)
Q Consensus 88 l~~a~ 92 (152)
||+|.
T Consensus 110 l~~A~ 114 (123)
T 3aaa_C 110 FEATD 114 (123)
T ss_dssp HHHCC
T ss_pred HHHhC
Confidence 99996
No 32
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.4e-20 Score=118.14 Aligned_cols=93 Identities=43% Similarity=0.649 Sum_probs=67.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 031810 13 KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 92 (152)
Q Consensus 13 ~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~a~ 92 (152)
+|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|++.|+++ +.++..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN--GRTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC--CCcHHHHHHHcCcHHHHHHHHHcCCCC--cccCCCCCcHHHHHH
Confidence 3677777777777777777777777777776665 777777777777777777777777766 667777777777777
Q ss_pred cchhhHHHHHHHHHHhhcC
Q 031810 93 SLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~~ 111 (152)
. .++.+++++|.+.+..
T Consensus 77 ~--~~~~~~~~~Ll~~g~~ 93 (126)
T 1n0r_A 77 R--NGHLEVVKLLLEAGAD 93 (126)
T ss_dssp H--TTCHHHHHHHHHTTCC
T ss_pred H--cChHHHHHHHHHcCCC
Confidence 3 3346677777766544
No 33
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.84 E-value=1.6e-20 Score=126.55 Aligned_cols=133 Identities=20% Similarity=0.141 Sum_probs=102.7
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +..+..|.|||
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L 105 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIE--GSTALIWAVKNNRLGIAEKLLSKGSNV--NTKDFSGKTPL 105 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTSCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhcccccccccc--CccHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCcHH
Confidence 35899999999999999999999999999999998887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhhcCCCc-cCCchhhhHHHHHHhhhhhHHHhhhcCCccccc
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSAGET-SYSSEKLNALSRLLVHMMPLLWLDLASDAVLSV 147 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (152)
|+|+ ..++.+++++|.+.+..... ...+......+....+...+.+....+..+..+
T Consensus 106 ~~A~--~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 163 (192)
T 2rfm_A 106 MWSI--IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISAR 163 (192)
T ss_dssp HHHH--HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB
T ss_pred HHHH--HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 9998 44457899999887655322 222222222333344445555555544444333
No 34
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=1.4e-20 Score=124.54 Aligned_cols=94 Identities=35% Similarity=0.482 Sum_probs=86.2
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.++..|.|||
T Consensus 75 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l 150 (169)
T 2y1l_E 75 AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDME--GHTPLHLAAMFGHLEIVEVLLKNGADV--NAQDKFGKTAF 150 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHH
Confidence 35889999999999999999999999999999998887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHh
Q 031810 89 HYCPSLEWAYEEMMRFQRES 108 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~ 108 (152)
++|+ ..++.+++++|.+.
T Consensus 151 ~~A~--~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 151 DISI--DNGNEDLAEILQKL 168 (169)
T ss_dssp HHHH--HTTCHHHHHHHHTC
T ss_pred HHHH--HhCCHHHHHHHHHc
Confidence 9998 44457899988764
No 35
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=4.6e-20 Score=131.66 Aligned_cols=100 Identities=20% Similarity=0.252 Sum_probs=86.9
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
+.+|..|.||||+|+..|+.++++.|++.|++++..+.. |+||||+|+..|+.+++++|++.|+++ +..+..|.||
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~t~ 128 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD--HVSPLHEACLGGHLSCVKILLKHGAQV--NGVTADWHTP 128 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTT--CCCHHHHHHHTTCHHHHHHHHHTTCCS--SCCCTTCCCH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC--CCCHHHHHHHCCcHHHHHHHHHCCCCC--CCCCCCCCCH
Confidence 346888999999999999999999999999999988887 999999999999999999999999987 8889999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcCCC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSAGE 113 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~~~ 113 (152)
||+|+ ..++.+++++|.+......
T Consensus 129 L~~A~--~~~~~~~v~~Ll~~g~~~~ 152 (285)
T 3d9h_A 129 LFNAC--VSGSWDCVNLLLQHGASVQ 152 (285)
T ss_dssp HHHHH--HHTCHHHHHHHHHTTCCSS
T ss_pred HHHHH--HcCHHHHHHHHHHCCCCCC
Confidence 99998 4445788888888765543
No 36
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.84 E-value=1.5e-20 Score=120.37 Aligned_cols=94 Identities=32% Similarity=0.447 Sum_probs=86.2
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +..|..|.|||
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~tpl 117 (136)
T 2jab_A 42 AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI--GFTPLHLAAFIGHLEIAEVLLKHGADV--NAQDKFGKTAF 117 (136)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--cCcCCCCCCHH
Confidence 35889999999999999999999999999999998887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHh
Q 031810 89 HYCPSLEWAYEEMMRFQRES 108 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~ 108 (152)
|+|+ ..++.+++++|.+.
T Consensus 118 ~~A~--~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 118 DISI--GNGNEDLAEILQKL 135 (136)
T ss_dssp HHHH--HTTCHHHHHHHHHC
T ss_pred HHHH--HCCCHHHHHHHHHc
Confidence 9998 44457899988764
No 37
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.84 E-value=1.3e-20 Score=124.25 Aligned_cols=97 Identities=21% Similarity=0.271 Sum_probs=88.7
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +..+..|.|||
T Consensus 64 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l 139 (167)
T 3v31_A 64 LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWN--GGTPLLYAVHGNHVKCVKMLLESGADP--TIETDSGYNSM 139 (167)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHH
Confidence 34889999999999999999999999999999999887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhhcC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
++|+ ..++.+++++|.+...+
T Consensus 140 ~~A~--~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 140 DLAV--ALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHH--HHTCHHHHHHHHHHHHH
T ss_pred HHHH--HcCcHHHHHHHHHHHHH
Confidence 9998 44558899999887654
No 38
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=9.3e-21 Score=132.06 Aligned_cols=91 Identities=23% Similarity=0.276 Sum_probs=43.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 031810 13 KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 92 (152)
Q Consensus 13 ~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~a~ 92 (152)
.|.||||.|+..|+.++++.|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~tpL~~A~ 111 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE--GITALHNAVCAGHTEIVKFLVQFGVNV--NAADSDGWTPLHCAA 111 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTT--SCCHHHHHHHHTCHHHHHHHHHHTCCT--TCCCTTCCCHHHHHH
T ss_pred hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHH
Confidence 3445555555555555555555544444444444 445555555555555555555554444 444444555555554
Q ss_pred cchhhHHHHHHHHHHhh
Q 031810 93 SLEWAYEEMMRFQRESF 109 (152)
Q Consensus 93 ~~~~~~~~~~~~l~~~~ 109 (152)
..++.+++++|.+.+
T Consensus 112 --~~~~~~~v~~Ll~~g 126 (239)
T 1ycs_B 112 --SCNNVQVCKFLVESG 126 (239)
T ss_dssp --HTTCHHHHHHHHHTT
T ss_pred --HcCCHHHHHHHHHcC
Confidence 222244444444443
No 39
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=2.9e-20 Score=130.11 Aligned_cols=95 Identities=31% Similarity=0.411 Sum_probs=77.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc-cCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART-KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+ .. |+||||+|+..|+.+++++|+++|+++ +.++..|.|||
T Consensus 73 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~t~l 148 (244)
T 3ui2_A 73 VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG--GLTALHMAAGYVRPEVVEALVELGADI--EVEDERGLTAL 148 (244)
T ss_dssp BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCcHH
Confidence 47888899999998888888998988888888777 55 889999998888888999888888877 77888888888
Q ss_pred cccccc--------------hhhHHHHHHHHHHh
Q 031810 89 HYCPSL--------------EWAYEEMMRFQRES 108 (152)
Q Consensus 89 ~~a~~~--------------~~~~~~~~~~l~~~ 108 (152)
|+|+.. ..+..+++++|.+.
T Consensus 149 ~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 149 ELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 888632 23556777777765
No 40
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.83 E-value=2.2e-21 Score=126.98 Aligned_cols=129 Identities=19% Similarity=0.159 Sum_probs=86.9
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCC-cc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNP-PL 88 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~t-pl 88 (152)
.+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+ .++.+++++|++.|+++ +.++..|.| ||
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~-~~~~~~v~~Ll~~g~~~--~~~d~~g~ttpL 82 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSY--GRRPIQVMM-MGSARVAELLLLHGAEP--NCADPATLTRPV 82 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSS--SCCTTTSSC-TTCHHHHHHHHTTTCCC--CCCCTTTCCCHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHH-cCCHHHHHHHHHcCCCC--CCcCCCCCcHHH
Confidence 3677888888888888888888888888888887776 888888874 78888888888888877 778888888 88
Q ss_pred cccccchhhHHHHHHHHHHhhcCCCc-cCCchhhhHHHHHHhhhhhHHHhhhcCCccc
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSAGET-SYSSEKLNALSRLLVHMMPLLWLDLASDAVL 145 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (152)
|+|+ ..++.+++++|.+.+..... ...+......+....+...+.++...+..+.
T Consensus 83 ~~A~--~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~ 138 (156)
T 1bi7_B 83 HDAA--REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR 138 (156)
T ss_dssp HHHH--HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----
T ss_pred HHHH--HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC
Confidence 8887 34446788888777654322 2222233333333445555555555544443
No 41
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=3.2e-20 Score=124.43 Aligned_cols=94 Identities=30% Similarity=0.274 Sum_probs=64.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCC-CCCCCccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDIND-SRFNPPLH 89 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~-~~g~tpl~ 89 (152)
+..|.||||+|+..|+.++++.|++ |++++..+.. |+||||+|+..|+.+++++|+++|+++ +.++ ..|.||||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~~g~tpL~ 115 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN--GRTALLFVAGLGSDKCVRLLAEAGADL--DHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCSSSSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CcCCCCCCCCHHH
Confidence 3456777777777777777777777 7777776666 777777777777777777777777766 5555 66777777
Q ss_pred ccccchhhHHHHHHHHHHhhcC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+|+ ..++.+++++|.+.+..
T Consensus 116 ~A~--~~~~~~~v~~Ll~~ga~ 135 (183)
T 3deo_A 116 MAA--GYVRPEVVEALVELGAD 135 (183)
T ss_dssp HHH--HTTCHHHHHHHHHHTCC
T ss_pred HHH--hcCcHHHHHHHHHcCCC
Confidence 776 33345677777666544
No 42
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.83 E-value=2.9e-21 Score=130.26 Aligned_cols=96 Identities=17% Similarity=0.119 Sum_probs=82.9
Q ss_pred CCCCcHHHHHHHcCC----HHHHHHHHhcCCCccccccCCCCchHHHHHHhhCc------HHHHHHHHHcCCCCCCCCCC
Q 031810 12 SKGVTPLHLAAQGGH----LEVMDVLLERGADIDARTKGACGWTPLHTAAKERK------KEAVRFLIENGAFLPDDIND 81 (152)
Q Consensus 12 ~~g~t~L~~a~~~g~----~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~------~~~~~~Ll~~ga~~~~~~~~ 81 (152)
..|+||||+|+..++ .+++++|++.|+++|.++.. |+||||+|+..++ .+++++|+++|+++ +.+|
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~--g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi--n~~d 111 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKE--GTTLFFPLFQGGGNDITGTTELCKIFLEKGADI--TALY 111 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTT--CCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS--SSCB
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCC--CCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC--CccC
Confidence 669999999999874 89999999999999999987 9999999999886 57899999999988 8999
Q ss_pred CCCC-Ccccccccch---hhHHHHHHHHHH-hhcC
Q 031810 82 SRFN-PPLHYCPSLE---WAYEEMMRFQRE-SFSA 111 (152)
Q Consensus 82 ~~g~-tpl~~a~~~~---~~~~~~~~~l~~-~~~~ 111 (152)
..|. ||||+|+..+ ....+++++|++ .+.+
T Consensus 112 ~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad 146 (186)
T 3t8k_A 112 KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ 146 (186)
T ss_dssp GGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC
T ss_pred CCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC
Confidence 9999 9999998532 344678888887 5544
No 43
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.83 E-value=5.8e-20 Score=129.42 Aligned_cols=95 Identities=27% Similarity=0.391 Sum_probs=69.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|++.|+++ +. +..|.||||
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~-~~~g~t~L~ 106 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD--WHTPLFNACVSGSWDCVNLLLQHGASV--QP-ESDLASPIH 106 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCS--SC-SCTTCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC--CC-CCCCCCHHH
Confidence 4777888888888888888888888888887777766 778888888888888888888887766 32 345778888
Q ss_pred ccccchhhHHHHHHHHHHhhcC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+|+. .++.+++++|.+.+..
T Consensus 107 ~A~~--~~~~~~v~~Ll~~g~~ 126 (261)
T 2xai_A 107 EAAR--RGHVECVNSLIAYGGN 126 (261)
T ss_dssp HHHH--TTCHHHHHHHHHTTCC
T ss_pred HHHH--cCcHHHHHHHHHcCCC
Confidence 8873 3346777777776544
No 44
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.83 E-value=2.8e-20 Score=130.41 Aligned_cols=107 Identities=28% Similarity=0.275 Sum_probs=89.4
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccC-----------CCCchHHHHHHhhCcHHHHHHHHH--
Q 031810 4 NVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG-----------ACGWTPLHTAAKERKKEAVRFLIE-- 70 (152)
Q Consensus 4 n~~~~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~-----------~~g~t~l~~a~~~~~~~~~~~Ll~-- 70 (152)
|.....+|..|.||||+|+..|+.+++++|++.|++++..+.. ..|+||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 3333445688999999999999999999999999999987652 128999999999999999999999
Q ss_pred -cCCCCCCCCCCCCCCCcccccccchhhHHH-------HHHHHHHhhcCC
Q 031810 71 -NGAFLPDDINDSRFNPPLHYCPSLEWAYEE-------MMRFQRESFSAG 112 (152)
Q Consensus 71 -~ga~~~~~~~~~~g~tpl~~a~~~~~~~~~-------~~~~l~~~~~~~ 112 (152)
.|+++ +.+|..|+||||+|+..+.+..+ ++++|.+.+.+.
T Consensus 160 ~~ga~~--n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 160 HQPASL--EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp SCCCCT--TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCc--CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 99988 89999999999999853344455 888888876543
No 45
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=2.1e-20 Score=128.65 Aligned_cols=90 Identities=22% Similarity=0.268 Sum_probs=42.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHc-CCCCCCCCCCCCCCCccccc
Q 031810 13 KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIEN-GAFLPDDINDSRFNPPLHYC 91 (152)
Q Consensus 13 ~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-ga~~~~~~~~~~g~tpl~~a 91 (152)
.|.||||+|+..|+.++++.|++.|++++..+.. |+||||+|+..|+.+++++|++. |+++ +.+|..|.||||+|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~~g~~~--~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKA--GSTALYWACHGGHKDIVEMLFTQPNIEL--NQQNKLGDTALHAA 147 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHTTSTTCCC--CCCCTTSCCHHHHH
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCC--CCCHHHHHHHcCCHHHHHHHHcCCCCCc--cccCCCCCCHHHHH
Confidence 3444555554444444444444444444444443 44555555444444444444444 4444 44444444555444
Q ss_pred ccchhhHHHHHHHHHHh
Q 031810 92 PSLEWAYEEMMRFQRES 108 (152)
Q Consensus 92 ~~~~~~~~~~~~~l~~~ 108 (152)
+ ..++.+++++|++.
T Consensus 148 ~--~~~~~~~v~~Ll~~ 162 (222)
T 3ehr_A 148 A--WKGYADIVQLLLAK 162 (222)
T ss_dssp H--HHTCHHHHHHHHHH
T ss_pred H--HcCCHHHHHHHHHc
Confidence 4 22223444444444
No 46
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.83 E-value=3.2e-20 Score=131.35 Aligned_cols=105 Identities=28% Similarity=0.259 Sum_probs=88.8
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccc--------------CCCCchHHHHHHhhCcHHHHHHH
Q 031810 3 VNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK--------------GACGWTPLHTAAKERKKEAVRFL 68 (152)
Q Consensus 3 ~n~~~~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~--------------~~~g~t~l~~a~~~~~~~~~~~L 68 (152)
+|.....+|..|.||||+|+..|+.+++++|++.|++++..+. . |+||||+|+..|+.+++++|
T Consensus 90 i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~--g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 90 VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYF--GELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp HTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCS--CBSHHHHHHHTTCHHHHHHH
T ss_pred hhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccC--CCCHHHHHHHcCCHHHHHHH
Confidence 3444444578999999999999999999999999999998876 5 89999999999999999999
Q ss_pred HH---cCCCCCCCCCCCCCCCcccccccchhh-------HHHHHHHHHHhhcC
Q 031810 69 IE---NGAFLPDDINDSRFNPPLHYCPSLEWA-------YEEMMRFQRESFSA 111 (152)
Q Consensus 69 l~---~ga~~~~~~~~~~g~tpl~~a~~~~~~-------~~~~~~~l~~~~~~ 111 (152)
++ .|+++ +.+|..|+||||+|+..+.. ..+++++|.+.+..
T Consensus 168 l~~~~~gad~--~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~ 218 (273)
T 2pnn_A 168 LQNSWQPADI--SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK 218 (273)
T ss_dssp HHCSSCCCCT--TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcccCCCCc--eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh
Confidence 99 89988 88999999999999853321 04677788777654
No 47
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.83 E-value=2.7e-20 Score=131.56 Aligned_cols=101 Identities=25% Similarity=0.314 Sum_probs=89.7
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
+.+|..|.||||+|+..|+.+++++|++.|++++..+.. .|+||||+|+..++.+++++|+++|+++ +.++..|.||
T Consensus 152 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~g~tpL~~A~~~~~~~~v~~Ll~~gad~--~~~d~~g~tp 228 (282)
T 1oy3_D 152 EAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPT-CGRTPLHLAVEAQAASVLELLLKAGADP--TARMYGGRTP 228 (282)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCH
T ss_pred CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCC--cccccCCCCH
Confidence 345889999999999999999999999999999987632 2899999999999999999999999988 8899999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcCCC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSAGE 113 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~~~ 113 (152)
||+|+. .++.+++++|.+.+....
T Consensus 229 L~~A~~--~~~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 229 LGSALL--RPNPILARLLRAHGAPEP 252 (282)
T ss_dssp HHHHHT--SSCHHHHHHHHHTTCCCC
T ss_pred HHHHHH--cCCcHHHHHHHHcCCCcC
Confidence 999994 445789999999887643
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.83 E-value=1.9e-20 Score=131.43 Aligned_cols=103 Identities=27% Similarity=0.268 Sum_probs=87.5
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc--------------cCCCCchHHHHHHhhCcHHHHHHHHH
Q 031810 5 VAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART--------------KGACGWTPLHTAAKERKKEAVRFLIE 70 (152)
Q Consensus 5 ~~~~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~--------------~~~~g~t~l~~a~~~~~~~~~~~Ll~ 70 (152)
...+..|..|.||||+|+..|+.+++++|++.|++++..+ .. |+||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~--g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYF--GELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCS--CSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccC--CCCHHHHHHHcCCHHHHHHHHh
Confidence 3334456789999999999999999999999999999887 35 9999999999999999999999
Q ss_pred ---cCCCCCCCCCCCCCCCcccccccchhhH-------HHHHHHHHHhhcC
Q 031810 71 ---NGAFLPDDINDSRFNPPLHYCPSLEWAY-------EEMMRFQRESFSA 111 (152)
Q Consensus 71 ---~ga~~~~~~~~~~g~tpl~~a~~~~~~~-------~~~~~~l~~~~~~ 111 (152)
.|+++ +.+|..|+||||+|+..+... .+++++|.+.+..
T Consensus 162 ~~~~ga~~--~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~ 210 (260)
T 3jxi_A 162 NGHKQADL--RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK 210 (260)
T ss_dssp CSSCCCCT--TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCC--cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc
Confidence 89988 899999999999998433311 4778888877654
No 49
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.83 E-value=1.4e-20 Score=123.13 Aligned_cols=98 Identities=27% Similarity=0.393 Sum_probs=86.2
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCch-HHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCC
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWT-PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNP 86 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~t 86 (152)
+.+|..|.||||+|+ .|+.+++++|++.|++++..+.. |+| |||+|+..++.+++++|+++|+++ +.++..|.|
T Consensus 39 ~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~--g~ttpL~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~t 113 (156)
T 1bi7_B 39 NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPA--TLTRPVHDAAREGFLDTLVVLHRAGARL--DVRDAWGRL 113 (156)
T ss_dssp TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTT--TCCCHHHHHHHHTCHHHHHHHHHHTCCS--SCCCTTCCC
T ss_pred CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCC--CCcHHHHHHHHCCCHHHHHHHHHcCCCC--cccCCCCCC
Confidence 335889999999985 89999999999999999999887 999 999999999999999999999988 889999999
Q ss_pred cccccccchhhHHHHHHHHHHhhcCC
Q 031810 87 PLHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 87 pl~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
|||+|+ ..++.+++++|.+.+...
T Consensus 114 pl~~A~--~~~~~~~v~~Ll~~ga~~ 137 (156)
T 1bi7_B 114 PVDLAE--ELGHRDVARYLRAAAGGT 137 (156)
T ss_dssp HHHHHH--HHTCHHHHHHHSSCC---
T ss_pred HHHHHH--HhCHHHHHHHHHHcCCCC
Confidence 999998 445578999998876553
No 50
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.83 E-value=3.2e-20 Score=132.05 Aligned_cols=93 Identities=23% Similarity=0.304 Sum_probs=58.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHH-cCCCCCCCCCCCCCCCccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIE-NGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~ga~~~~~~~~~~g~tpl~ 89 (152)
|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|++ .|+++ +.+|..|.||||
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~--G~TpLh~A~~~g~~~iv~~Ll~~~gad~--~~~d~~g~TpL~ 255 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDD--GSTALMCACEHGHKEIAGLLLAVPSCDI--SLTDRDGSTALM 255 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHTSTTCCT--TCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC--CCCHHHHHHHCCCHHHHHHHHhcCCCCC--cCcCCCCCCHHH
Confidence 555666666666666666666666666666666655 6666666666666666666666 56655 566666666666
Q ss_pred ccccchhhHHHHHHHHHHhh
Q 031810 90 YCPSLEWAYEEMMRFQRESF 109 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~ 109 (152)
+|+ ..++.+++++|.+..
T Consensus 256 ~A~--~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 256 VAL--DAGQSEIASMLYSRM 273 (276)
T ss_dssp HHH--HHTCHHHHHHHHHHC
T ss_pred HHH--HcCCHHHHHHHHhcc
Confidence 666 333356666665543
No 51
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=1.1e-19 Score=114.03 Aligned_cols=96 Identities=42% Similarity=0.633 Sum_probs=87.6
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..++.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.|||
T Consensus 30 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~l~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~l 105 (126)
T 1n0r_A 30 AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN--GRTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPL 105 (126)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCC--CCcHHHHHHHcChHHHHHHHHHcCCCC--cccCCCCCCHH
Confidence 35889999999999999999999999999999998887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhhc
Q 031810 89 HYCPSLEWAYEEMMRFQRESFS 110 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~ 110 (152)
++|+ ..++.+++++|.+.+.
T Consensus 106 ~~A~--~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 106 HLAA--RNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHH--HTTCHHHHHHHHHHTC
T ss_pred HHHH--HcCcHHHHHHHHHcCC
Confidence 9998 4445789999988754
No 52
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.82 E-value=6.1e-20 Score=128.73 Aligned_cols=95 Identities=28% Similarity=0.346 Sum_probs=62.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 90 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~ 90 (152)
|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.||||+
T Consensus 121 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpL~~ 196 (253)
T 1yyh_A 121 MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL--GKSALHWAAAVNNVDAAVVLLKNGANK--DMQNNREETPLFL 196 (253)
T ss_dssp CTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTT--SCBHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHH
T ss_pred CCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHH
Confidence 566666666666666666666666666666666655 667777777777777777777777665 6666667777777
Q ss_pred cccchhhHHHHHHHHHHhhcC
Q 031810 91 CPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 91 a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+ ..++.+++++|.+.+.+
T Consensus 197 A~--~~~~~~~v~~Ll~~ga~ 215 (253)
T 1yyh_A 197 AA--REGSYETAKVLLDHFAN 215 (253)
T ss_dssp HH--HHTCHHHHHHHHHTTCC
T ss_pred HH--HCCCHHHHHHHHHcCCC
Confidence 76 33335666666666544
No 53
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=2.5e-20 Score=142.43 Aligned_cols=96 Identities=20% Similarity=0.309 Sum_probs=87.4
Q ss_pred CCCCCcHHHHHHH---cCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 11 KSKGVTPLHLAAQ---GGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 11 d~~g~t~L~~a~~---~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
|..|.||||+|+. .|+.+++++|++.|+++|..|.. |+||||+|+..|+.+++++|+++|+++ +.+|..|.||
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~--g~TpLh~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~tp 243 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD--GNTALHYAALYNQPDCLKLLLKGRALV--GTVNEAGETA 243 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSS--SCCHHHHHTTTTCHHHHHHHHHTCCCC--SCCCTTCCCH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCC--CCcHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCH
Confidence 7889999999977 89999999999999999999988 999999999999999999999999988 8999999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcCC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
||+|+ ..++.+++++|.+.+.+.
T Consensus 244 l~~A~--~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 244 LDIAR--KKHHKECEELLEQAQAGT 266 (497)
T ss_dssp HHHHH--HTTCHHHHHHHHHTCC--
T ss_pred HHHHH--HcCCHHHHHHHHHhCCCC
Confidence 99998 445578999999887653
No 54
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.82 E-value=4.2e-20 Score=124.58 Aligned_cols=96 Identities=20% Similarity=0.207 Sum_probs=82.9
Q ss_pred CCCCCCcHHHHHHHcCC------HHHHHHHHhcCCCccccccCCCCc-hHHHHHHhh-----CcHHHHHHHHH-cCCCCC
Q 031810 10 PKSKGVTPLHLAAQGGH------LEVMDVLLERGADIDARTKGACGW-TPLHTAAKE-----RKKEAVRFLIE-NGAFLP 76 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~------~~~~~~Ll~~~~~~~~~~~~~~g~-t~l~~a~~~-----~~~~~~~~Ll~-~ga~~~ 76 (152)
+|..|+||||+|+..++ .+++++|++.|+++|.+|.. |+ ||||+|+.. +..+++++|++ .|+++
T Consensus 71 ~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~--g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~- 147 (186)
T 3t8k_A 71 RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKP--YKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL- 147 (186)
T ss_dssp CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGG--GTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-
T ss_pred CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCC--cCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-
Confidence 48999999999999886 57899999999999999988 99 999999984 34578999999 99988
Q ss_pred CCCCCCCCCCcccccccchhhHHHHHHHHHHhhcC
Q 031810 77 DDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 77 ~~~~~~~g~tpl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+.+|..|.||||+|+.. +..+++++|.+...+
T Consensus 148 -~~~d~~G~TpL~~A~~~--~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 148 -LIKDKWGLTALEFVKRC--QKPIALKMMEDYIKK 179 (186)
T ss_dssp -TCCCTTSCCHHHHHHTT--TCHHHHHHHHHHHHH
T ss_pred -cccCCCCCCHHHHHHHc--CCHHHHHHHHHHHHH
Confidence 89999999999999844 447888888887654
No 55
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=2.6e-19 Score=120.99 Aligned_cols=97 Identities=19% Similarity=0.268 Sum_probs=84.8
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHH-HcCCCCCCCCCCCCCCCc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLI-ENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~ga~~~~~~~~~~g~tp 87 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+ ..++++ +..+..|.||
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~l~~A~~~~~~~~~~~Ll~~~~~~~--~~~~~~g~t~ 109 (201)
T 3hra_A 34 EVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSI--SDSPYLYAGAQGRTEILAYMLKHATPDL--NKHNRYGGNA 109 (201)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHHSCCCT--TCCCTTSCCS
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHhccCccc--ccccCCCCcH
Confidence 34888999999999999999999999999999998887 999999999999999999999 556666 8889999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
||+|+. .++.+++++|.+....
T Consensus 110 L~~A~~--~~~~~~v~~Ll~~g~~ 131 (201)
T 3hra_A 110 LIPAAE--KGHIDNVKLLLEDGRE 131 (201)
T ss_dssp HHHHHH--TTCHHHHHHHHHHCCC
T ss_pred HHHHHH--cCCHHHHHHHHHcCCC
Confidence 999984 4457899999888743
No 56
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.82 E-value=1.5e-19 Score=125.14 Aligned_cols=95 Identities=31% Similarity=0.483 Sum_probs=80.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|++.|+++ +..+..|.||||
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~ 82 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSED--QRTPLMEAAENNHLEAVKYLIKAGALV--DPKDAEGSTCLH 82 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHTTTCCC--CCCCTTSCCHHH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCC--CCCHHHHHHHhCCHHHHHHHHhCCCCC--CCCCCCCCcHHH
Confidence 3788999999999999999999999999998888777 889999999999999999999999877 778888899999
Q ss_pred ccccchhhHHHHHHHHHHhhc
Q 031810 90 YCPSLEWAYEEMMRFQRESFS 110 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~ 110 (152)
+|+. .+..+++++|.+...
T Consensus 83 ~A~~--~~~~~~~~~Ll~~~~ 101 (237)
T 3b7b_A 83 LAAK--KGHYEVVQYLLSNGQ 101 (237)
T ss_dssp HHHH--TTCHHHHHHHHTTTC
T ss_pred HHHH--cCCHHHHHHHHhCCC
Confidence 9983 444788888887763
No 57
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.82 E-value=3.9e-20 Score=129.68 Aligned_cols=97 Identities=27% Similarity=0.307 Sum_probs=86.7
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.+|..|.||+
T Consensus 152 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~--g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~tpl 227 (253)
T 1yyh_A 152 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR--EETPLFLAAREGSYETAKVLLDHFANR--DITDHMDRLPR 227 (253)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTCCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHcCCCc--cccccCCCCHH
Confidence 34889999999999999999999999999999999887 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhhcC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
++|+ ..++.+++++|......
T Consensus 228 ~~A~--~~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 228 DIAQ--ERMHHDIVRLLDLEHHH 248 (253)
T ss_dssp HHHH--HTTCHHHHHHHHC----
T ss_pred HHHH--HcCCHHHHHHHHHHhhh
Confidence 9998 55558999999876654
No 58
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.82 E-value=7.4e-20 Score=125.56 Aligned_cols=124 Identities=24% Similarity=0.267 Sum_probs=97.7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
++..|.||||+|+..++.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +.++..|.||||
T Consensus 88 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~ 163 (223)
T 2f8y_A 88 RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL--GKSALHWAAAVNNVDAAVVLLKNGANK--DMQNNREETPLF 163 (223)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT--SCBHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHH
T ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCC--CCcHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCcCHHH
Confidence 4888999999999999999999999999999998887 999999999999999999999999988 889999999999
Q ss_pred ccccchhhHHHHHHHHHHhhcCCCcc-CCchhhhHHHHHHhhhhhHHHhhh
Q 031810 90 YCPSLEWAYEEMMRFQRESFSAGETS-YSSEKLNALSRLLVHMMPLLWLDL 139 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 139 (152)
+|+ ..++.+++++|.+.+...... ..+......+....+...+.+...
T Consensus 164 ~A~--~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~ 212 (223)
T 2f8y_A 164 LAA--REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE 212 (223)
T ss_dssp HHH--HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHH--HcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHH
Confidence 998 445578999998887654322 222233333333444444444443
No 59
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.82 E-value=2.5e-19 Score=123.49 Aligned_cols=78 Identities=33% Similarity=0.629 Sum_probs=34.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 90 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~ 90 (152)
|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|+++ +..+..|.||||+
T Consensus 37 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~ 112 (231)
T 3aji_A 37 DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDA--GWSPLHIAASAGXDEIVKALLVKGAHV--NAVNQNGCTPLHY 112 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCC--CCCHHHHHHHcCHHHHHHHHHHcCCCC--CCCCCCCCCHHHH
Confidence 344444444444444444444444444444444333 444444444444444444444444433 3344444444444
Q ss_pred cc
Q 031810 91 CP 92 (152)
Q Consensus 91 a~ 92 (152)
|+
T Consensus 113 A~ 114 (231)
T 3aji_A 113 AA 114 (231)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 60
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.82 E-value=2.4e-20 Score=129.97 Aligned_cols=103 Identities=28% Similarity=0.438 Sum_probs=90.8
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCC-
Q 031810 7 AWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFN- 85 (152)
Q Consensus 7 ~~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~- 85 (152)
.+.+|..|.||||+|+..|+.+++++|+++|++++..+.. |+||||+|+..|+.+++++|+++|+++ +..+..|.
T Consensus 63 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~--g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~~~~ 138 (239)
T 1ycs_B 63 PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSD--GWTPLHCAASCNNVQVCKFLVESGAAV--FAMTYSDMQ 138 (239)
T ss_dssp CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCSSSCC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--ceecCCCCc
Confidence 3345899999999999999999999999999999999887 999999999999999999999999988 77887776
Q ss_pred CcccccccchhhHHHHHHHHHHhhcCCC
Q 031810 86 PPLHYCPSLEWAYEEMMRFQRESFSAGE 113 (152)
Q Consensus 86 tpl~~a~~~~~~~~~~~~~l~~~~~~~~ 113 (152)
||||+|.....++.+++++|.+......
T Consensus 139 t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 139 TAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp CHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred chHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 9999995445666789999998876643
No 61
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.82 E-value=1.4e-19 Score=124.93 Aligned_cols=98 Identities=32% Similarity=0.343 Sum_probs=59.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccC-----------CCCchHHHHHHhhCcHHHHHHHHHcCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG-----------ACGWTPLHTAAKERKKEAVRFLIENGAFLPDD 78 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~-----------~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~ 78 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. ..|+||||+|+..|+.+++++|+++|+++ +
T Consensus 71 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~ 148 (232)
T 2rfa_A 71 ELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI--R 148 (232)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT--T
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC--C
Confidence 3556666666666666666666666666666655430 12666666666666666666666666665 6
Q ss_pred CCCCCCCCcccccccchhhHHHHH----HHHHHhhcC
Q 031810 79 INDSRFNPPLHYCPSLEWAYEEMM----RFQRESFSA 111 (152)
Q Consensus 79 ~~~~~g~tpl~~a~~~~~~~~~~~----~~l~~~~~~ 111 (152)
.+|..|.||||+|+..+. .+++ ++|.+.+..
T Consensus 149 ~~d~~g~t~L~~A~~~~~--~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPN--KTFACQMYNLLLSYDGG 183 (232)
T ss_dssp CCCTTSCCHHHHHHTCSC--HHHHHHHHHHHHHTTCS
T ss_pred CCCCCCCCHHHHHHHcCC--hHHHHHHHHHHHhcCCc
Confidence 666666666666663332 3333 555555443
No 62
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.82 E-value=2.5e-19 Score=126.19 Aligned_cols=97 Identities=26% Similarity=0.293 Sum_probs=78.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++.. .. |.||||+|+..|+.+++++|++.|+++ +..+..|.||||
T Consensus 65 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~ 139 (261)
T 2xai_A 65 VTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SD--LASPIHEAARRGHVECVNSLIAYGGNI--DHKISHLGTPLY 139 (261)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CT--TCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCBTTTBCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-CC--CCCHHHHHHHcCcHHHHHHHHHcCCCC--CcCCCCCCCHHH
Confidence 4788889999999988889999999888888753 33 788999988888888888888888877 778888888988
Q ss_pred ccccchhhHHHHHHHHHHhhcCCC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSAGE 113 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~~~ 113 (152)
+|+ ..++.+++++|.+.+....
T Consensus 140 ~A~--~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 140 LAC--ENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHH--HTTCHHHHHHHHHHTCCTT
T ss_pred HHH--HhCCHHHHHHHHHcCCCCC
Confidence 888 4444778888888766543
No 63
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=7e-20 Score=135.25 Aligned_cols=95 Identities=25% Similarity=0.321 Sum_probs=86.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccccc
Q 031810 12 SKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYC 91 (152)
Q Consensus 12 ~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~a 91 (152)
..|.||||+|+..|+.+++++|+++|++++..+.. |+||||+|+..++.+++++|+++|+++ +..|..|.||||+|
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~--G~TpLh~A~~~g~~~~v~~LL~~Gad~--~~~d~~G~TpL~~A 308 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQADSA--GRGPLHHATILGHTGLACLFLKRGADL--GARDSEGRDPLTIA 308 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHHCcCCC--CCcCCCCCCHHHHH
Confidence 88999999999999999999999999999999888 999999999999999999999999988 89999999999999
Q ss_pred ccchhhHHHHHHHHHHhhcCC
Q 031810 92 PSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~~~ 112 (152)
+ ..++.+++++|+......
T Consensus 309 ~--~~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 309 M--ETANADIVTLLRLAKMRE 327 (368)
T ss_dssp H--HTTCHHHHHHHHHHHC--
T ss_pred H--HCCCHHHHHHHHHcCCCc
Confidence 8 444578999998877553
No 64
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=4.8e-20 Score=132.84 Aligned_cols=96 Identities=20% Similarity=0.306 Sum_probs=87.7
Q ss_pred CCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQG---GHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNP 86 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~---g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~t 86 (152)
.+..|.||||+|+.. ++.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|.|
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~--G~TpLh~A~~~g~~~~v~~Ll~~gad~--~~~d~~G~T 261 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD--GNTALHYAALYNQPDCLKLLLKGRALV--GTVNEAGET 261 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCC--SCCCTTSCC
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCC
Confidence 378899999999997 8999999999999999999887 999999999999999999999999988 899999999
Q ss_pred cccccccchhhHHHHHHHHHHhhcC
Q 031810 87 PLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 87 pl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|||+|+ ..++.+++++|.+.+..
T Consensus 262 pL~~A~--~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 262 ALDIAR--KKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHH--HHTCHHHHHHHHHHHHH
T ss_pred HHHHHH--HcCCHHHHHHHHHhcCC
Confidence 999998 44557899999887654
No 65
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.82 E-value=1.1e-19 Score=125.88 Aligned_cols=96 Identities=24% Similarity=0.292 Sum_probs=57.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccc-CCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK-GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.|..|.||||+|+..|+.+++++|++.|++++..+. . |+||||+|+..++.+++++|+++|+++ +..+..|.|||
T Consensus 113 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~--g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl 188 (236)
T 1ikn_D 113 TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCN--GRTALHLAVDLQNPDLVSLLLKCGADV--NRVTYQGYSPY 188 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTT--CCCHHHHHHHTTCHHHHHHHHTTTCCS--CCCCTTCCCGG
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CcccCCCCCHH
Confidence 355566666666666666666666666666665554 4 666666666666666666666666655 55666666666
Q ss_pred cccccchhhHHHHHHHHHHhhcC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|+|+. .++.+++++|.+.+..
T Consensus 189 ~~A~~--~~~~~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 189 QLTWG--RPSTRIQQQLGQLTLE 209 (236)
T ss_dssp GGCTT--SSCHHHHHHHHTTSCG
T ss_pred HHHHc--cCchHHHHHHHHcchh
Confidence 66652 2335566666655543
No 66
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.81 E-value=1.8e-19 Score=124.25 Aligned_cols=98 Identities=31% Similarity=0.333 Sum_probs=87.6
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..++.+++++|++.|++++..+.. |.||||+|+..++.+++++|++.|+++ +.++..|.|||
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L 176 (231)
T 3aji_A 101 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHY--DATAMHRAAAKGNLKMVHILLFYKAST--NIQDTEGNTPL 176 (231)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCcHHHHHHHcCCHHHHHHHHhcCCCc--cccCCCCCCHH
Confidence 34888999999999999999999999999999988877 999999999999999999999999988 88899999999
Q ss_pred cccccchhhHHHHHHHHHHhhcCC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
|+|+ ..++.+++++|.+.+.+.
T Consensus 177 ~~A~--~~~~~~~v~~Ll~~ga~~ 198 (231)
T 3aji_A 177 HLAC--DEERVEEAKFLVTQGASI 198 (231)
T ss_dssp HHHH--HTTCHHHHHHHHHTTCCS
T ss_pred HHHH--HCCCHHHHHHHHHCCCCC
Confidence 9998 444578999998886653
No 67
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.81 E-value=1.4e-19 Score=124.44 Aligned_cols=93 Identities=34% Similarity=0.432 Sum_probs=53.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcC--CCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERG--ADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~--~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
|..|.||||+|+..|+.+++++|++.| ++++..+.. |.||||+|+..++.+++++|++.|+++ +.++..|.|||
T Consensus 69 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L 144 (228)
T 2dzn_A 69 DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQ--GVTCLHLAVGKKWFEVSQFLIENGASV--RIKDKFNQIPL 144 (228)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCS--CCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcC--CCCHHHHHHHcCCHhHHHHHHHcCCCc--cccCCCCCCHH
Confidence 555666666666666666666666655 555555544 566666666666666666666666555 55555666666
Q ss_pred cccccchhhHHHHHHHHHHhh
Q 031810 89 HYCPSLEWAYEEMMRFQRESF 109 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~ 109 (152)
|+|+. .++.+++++|.+.+
T Consensus 145 ~~A~~--~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 145 HRAAS--VGSLKLIELLCGLG 163 (228)
T ss_dssp HHHHH--TTCHHHHHHHHTTT
T ss_pred HHHHH--cCCHHHHHHHHhcC
Confidence 66652 22345555555554
No 68
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.81 E-value=1.4e-19 Score=125.38 Aligned_cols=98 Identities=23% Similarity=0.240 Sum_probs=64.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCC----CCCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLP----DDINDSRFN 85 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~----~~~~~~~g~ 85 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|++.|++.. .+..+..|.
T Consensus 41 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~ 118 (236)
T 1ikn_D 41 QNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFR--GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGH 118 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTT--CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCC
Confidence 3666777777777777777777777777777766665 7777777777777777777777765410 145566677
Q ss_pred CcccccccchhhHHHHHHHHHHhhcC
Q 031810 86 PPLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 86 tpl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
||||+|+. .++.+++++|.+.+..
T Consensus 119 t~L~~A~~--~~~~~~v~~Ll~~g~~ 142 (236)
T 1ikn_D 119 TCLHLASI--HGYLGIVELLVSLGAD 142 (236)
T ss_dssp CHHHHHHH--TTCHHHHHHHHHHTCC
T ss_pred CHHHHHHH--cCCHHHHHHHHHcCCC
Confidence 77777763 3335666666666544
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.81 E-value=6e-20 Score=127.46 Aligned_cols=98 Identities=27% Similarity=0.193 Sum_probs=88.4
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
.+..|.||||+|+..|+.++++.|++.|++++..+.. |+||||+|+..|+.+++++|++.|+++ +.+|..|.||||
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~--g~tpLh~A~~~g~~~~v~~Ll~~ga~~--n~~d~~g~tpLh 92 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEE--GITALHNAICGANYSIVDFLITAGANV--NSPDSHGWTPLH 92 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHH
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHH
Confidence 4667788999999999999999999999999998888 999999999999999999999999988 889999999999
Q ss_pred ccccchhhHHHHHHHHHHhhcCCC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSAGE 113 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~~~ 113 (152)
+|+. .++.+++++|.+.+....
T Consensus 93 ~A~~--~g~~~~v~~Ll~~ga~~~ 114 (229)
T 2vge_A 93 CAAS--CNDTVICMALVQHGAAIF 114 (229)
T ss_dssp HHHH--TTCHHHHHHHHTTTCCTT
T ss_pred HHHH--cCCHHHHHHHHHcCCCcc
Confidence 9994 445889999998876543
No 70
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.81 E-value=1.5e-19 Score=127.71 Aligned_cols=94 Identities=26% Similarity=0.211 Sum_probs=69.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCC---ccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGAD---IDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNP 86 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~---~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~t 86 (152)
+|.+|.||||+|+..|+.+++++|++.|++ ++..+.. |+||||+|+..|+.+++++|+++|+++ +..+..|.|
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~t 80 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL--GQTALHLAAILGEASTVEKLYAAGAGV--LVAERGGHT 80 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTSCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCC
Confidence 477788888888888888888888877776 6666665 778888888888888888888888776 677777788
Q ss_pred cccccccchhhHHHHHHHHHHhh
Q 031810 87 PLHYCPSLEWAYEEMMRFQRESF 109 (152)
Q Consensus 87 pl~~a~~~~~~~~~~~~~l~~~~ 109 (152)
|||+|+.. ++.+++++|.+..
T Consensus 81 pL~~A~~~--~~~~~v~~Ll~~~ 101 (282)
T 1oy3_D 81 ALHLACRV--RAHTCACVLLQPR 101 (282)
T ss_dssp HHHHHTTT--TCHHHHHHHSSSC
T ss_pred HHHHHHHc--CCcchhHhhhccC
Confidence 88887733 3356777776644
No 71
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.81 E-value=5.9e-19 Score=125.95 Aligned_cols=92 Identities=29% Similarity=0.506 Sum_probs=76.1
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +..+..|.||||
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~--g~tpL~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~l~ 144 (299)
T 1s70_B 69 ANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE--GWIPLHAAASCGYLDIAEYLISQGAHV--GAVNSEGDTPLD 144 (299)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--CCcHHHHHHHcCCHHHHHHHHhCCCCC--CCcCCCCCCHHH
Confidence 4788999999999999999999999999999888877 899999999999999999999999877 778888888888
Q ss_pred ccccchhhHHHHHHHHHH
Q 031810 90 YCPSLEWAYEEMMRFQRE 107 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~ 107 (152)
+|+. .+..++++.+..
T Consensus 145 ~A~~--~~~~~~~~~ll~ 160 (299)
T 1s70_B 145 IAEE--EAMEELLQNEVN 160 (299)
T ss_dssp HCCS--HHHHHHHHHHHH
T ss_pred HHHh--cchHHHHHHHHh
Confidence 8873 334555554443
No 72
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.81 E-value=4.6e-19 Score=121.57 Aligned_cols=129 Identities=22% Similarity=0.144 Sum_probs=97.0
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGA-DIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
.+|..|.||||+|+..|+.+++++|++.+. +++..+.. |.||||+|+..++.+++++|++.|+++ +..+..|.||
T Consensus 53 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~ 128 (223)
T 2f8y_A 53 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD--GTTPLILAARLAVEGMLEDLINSHADV--NAVDDLGKSA 128 (223)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTT--CCCHHHHHHHHTCHHHHHHHHHTTCCT--TCBCTTSCBH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC--CCcHHHHHHHhCcHHHHHHHHHcCCCC--cCcCCCCCcH
Confidence 358889999999999999999999999886 78887777 999999999999999999999999987 8889999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcCCCcc-CCchhhhHHHHHHhhhhhHHHhhhcCCc
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSAGETS-YSSEKLNALSRLLVHMMPLLWLDLASDA 143 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (152)
||+|+. .++.+++++|.+.+...... ..+......+........+.+....+..
T Consensus 129 L~~A~~--~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 183 (223)
T 2f8y_A 129 LHWAAA--VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 183 (223)
T ss_dssp HHHHHH--TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHH--cCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999984 44578898888876543222 2222222233333444445554444433
No 73
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.81 E-value=1.7e-19 Score=124.87 Aligned_cols=98 Identities=30% Similarity=0.384 Sum_probs=85.2
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc-cCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART-KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+ .. |.||||+|+..++.+++++|++.|+++ +..+..|.||
T Consensus 111 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~ 186 (241)
T 1k1a_A 111 ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKS--GRSPLIHAVENNSLSMVQLLLQHGANV--NAQMYSGSSA 186 (241)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCBCTTSCBH
T ss_pred ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccC--CCcHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCH
Confidence 348889999999999999999999999999998877 55 899999999999999999999999987 8889999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcCC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
||+|+ ..++.+++++|.+.+.+.
T Consensus 187 L~~A~--~~~~~~~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 187 LHSAS--GRGLLPLVRTLVRSGADS 209 (241)
T ss_dssp HHHHH--HHTCHHHHHHHHHTTCCT
T ss_pred HHHHH--HcCCHHHHHHHHhcCCCC
Confidence 99998 445578898888876653
No 74
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.81 E-value=2.1e-19 Score=128.34 Aligned_cols=96 Identities=19% Similarity=0.137 Sum_probs=81.9
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
.+|..|.||||+|+..|+.+++++|++.|++++.. + |+||||+|+..|+.+++++|+++|+++ +..+..|.|||
T Consensus 26 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~t~L 99 (285)
T 3kea_A 26 KADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--E--NEFPLHQAATLEDTKIVKILLFSGLDD--SQFDDKGNTAL 99 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--T--TCCHHHHHTTSSSCHHHHHHHHTTCCT--TCCCTTSCCHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--C--CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCcHH
Confidence 35888999999999999999999999999988876 3 789999999999999999999999987 77888999999
Q ss_pred cccccchhhHHHHHHHHHHhhcCC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
|+|+ ..++.+++++|.+.+...
T Consensus 100 ~~A~--~~g~~~~v~~Ll~~ga~~ 121 (285)
T 3kea_A 100 YYAV--DSGNMQTVKLFVKKNWRL 121 (285)
T ss_dssp HHHH--HTTCHHHHHHHHHHCGGG
T ss_pred HHHH--HcCCHHHHHHHHhcCCCC
Confidence 9998 444578888888876543
No 75
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.80 E-value=2.4e-19 Score=130.03 Aligned_cols=100 Identities=29% Similarity=0.419 Sum_probs=90.2
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCC
Q 031810 7 AWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNP 86 (152)
Q Consensus 7 ~~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~t 86 (152)
.+.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +..+..|.|
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~g~~~iv~~Ll~~g~~~--~~~~~~g~t 126 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG--GLVPLHNACSYGHYEVTELLLKHGACV--NAMDLWQFT 126 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCC
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCcHHHHHHHCCCHHHHHHHHHCCCCC--CCCCCCCCC
Confidence 3445889999999999999999999999999999999887 999999999999999999999999988 889999999
Q ss_pred cccccccchhhHHHHHHHHHHhhcCC
Q 031810 87 PLHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 87 pl~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
|||+|+ ..++.+++++|.+.+...
T Consensus 127 ~L~~A~--~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 127 PLHEAA--SKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp HHHHHH--HTTCHHHHHHHHHTTCCT
T ss_pred HHHHHH--HcCCHHHHHHHHHcCCCC
Confidence 999999 444578999999886553
No 76
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.80 E-value=3.5e-19 Score=133.41 Aligned_cols=96 Identities=30% Similarity=0.456 Sum_probs=75.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
.+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|++.|+++ +.++..|.||||
T Consensus 10 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~--~~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~L~ 85 (437)
T 1n11_A 10 GGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVK--VETPLHMAARAGHTEVAKYLLQNKAKV--NAKAKDDQTPLH 85 (437)
T ss_dssp -----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSC--CCCHHHHHHHHTCHHHHHHHHHHTCCS--SCCCTTSCCHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHhCCCCC--CCCCCCCCCHHH
Confidence 4778888888888888888888888888888887776 888888888888888888888888877 778888888888
Q ss_pred ccccchhhHHHHHHHHHHhhcC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+|+ ..++.+++++|.+.+..
T Consensus 86 ~A~--~~g~~~~v~~Ll~~ga~ 105 (437)
T 1n11_A 86 CAA--RIGHTNMVKLLLENNAN 105 (437)
T ss_dssp HHH--HHTCHHHHHHHHHHTCC
T ss_pred HHH--HCCCHHHHHHHHhCCCC
Confidence 888 44447788888877654
No 77
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.80 E-value=7.8e-19 Score=121.56 Aligned_cols=95 Identities=26% Similarity=0.304 Sum_probs=56.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHh----cCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLE----RGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFN 85 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~----~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~ 85 (152)
+|.+|.||||+|+..|+.++++.|++ .+.+++..+.. |+||||+|+..|+.+++++|++.|+++ +..+..|.
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~ 80 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNL--RQTPLHLAVITTLPSVVRLLVTAGASP--MALDRHGQ 80 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCccccc--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCC
Confidence 35666666666666666666666664 45666665555 666666666666666666666666655 55566666
Q ss_pred CcccccccchhhHHHHHHHHHHhhc
Q 031810 86 PPLHYCPSLEWAYEEMMRFQRESFS 110 (152)
Q Consensus 86 tpl~~a~~~~~~~~~~~~~l~~~~~ 110 (152)
||||+|+. .+..+++++|.+...
T Consensus 81 t~l~~A~~--~~~~~~~~~Ll~~~~ 103 (241)
T 1k1a_A 81 TAAHLACE--HRSPTCLRALLDSAA 103 (241)
T ss_dssp CHHHHHHH--TTCHHHHHHHHHHSC
T ss_pred CHHHHHHH--cCCHHHHHHHHHcCC
Confidence 66666652 233455555555543
No 78
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.80 E-value=9.2e-20 Score=133.75 Aligned_cols=93 Identities=19% Similarity=0.190 Sum_probs=61.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCC-----ccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCC
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGAD-----IDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFN 85 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~-----~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~ 85 (152)
|..|.||||+|+..|+.+++++|++.|++ ++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|.
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~gad~--~~~d~~g~ 245 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ--GNSHLHWAILINWEDVAMRFVEMGIDV--NMEDNEHT 245 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTT--CCCTTHHHHTTTCHHHHHHHHTTTCCT--TCCCTTSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCC--CCcHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCC
Confidence 66666777777766667777777766666 6666655 667777777667777777777766665 66666667
Q ss_pred CcccccccchhhHHHHHHHHHHhh
Q 031810 86 PPLHYCPSLEWAYEEMMRFQRESF 109 (152)
Q Consensus 86 tpl~~a~~~~~~~~~~~~~l~~~~ 109 (152)
||||+|+ ..++.+++++|++.+
T Consensus 246 tpL~~A~--~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 246 VPLYLSV--RAAMVLLTKELLQKT 267 (364)
T ss_dssp CHHHHHH--HTCCHHHHHHHHHHS
T ss_pred CHHHHHH--HhChHHHHHHHHHcC
Confidence 7777766 333356666666653
No 79
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=8.5e-20 Score=125.61 Aligned_cols=97 Identities=23% Similarity=0.375 Sum_probs=82.4
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLER-GADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
.+|..|.||||+|+..|+.+++++|++. |++++..+.. |+||||+|+..|+.+++++|+++|+++ +.++..|.||
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~--g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~ 176 (222)
T 3ehr_A 101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL--GDTALHAAAWKGYADIVQLLLAKGART--DLRNIEKKLA 176 (222)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTT--SCCHHHHHHHHTCHHHHHHHHHHTCCS--CCCCTTSCCH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--ccccCCCCCH
Confidence 3488999999999999999999999998 9999999888 999999999999999999999999988 8899999999
Q ss_pred ccccccchhhHHHHHHHHHHhhcC
Q 031810 88 LHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 88 l~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|++|+ ..+..++++.+......
T Consensus 177 l~~A~--~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 177 FDMAT--NAACASLLKKKQGTDAV 198 (222)
T ss_dssp HHHCC--SHHHHHHHC--------
T ss_pred HHHhc--chhHHHHHHHHhccchh
Confidence 99998 45557788777766554
No 80
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=8.2e-19 Score=125.16 Aligned_cols=92 Identities=27% Similarity=0.326 Sum_probs=40.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 90 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~ 90 (152)
|..|.||||+|+..|+.+++++|++.|++++..+ . |.||||+|+..|+.+++++|++.|+++ +..+..|.||||+
T Consensus 122 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~--g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~ 196 (285)
T 3d9h_A 122 TADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-D--LASPIHEAARRGHVECVNSLIAYGGNI--DHKISHLGTPLYL 196 (285)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-T--TSCHHHHHHHHTCHHHHHHHHHTTCCT--TCCBTTTBCHHHH
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-C--CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHH
Confidence 3444444444444444444444444444443221 1 444444444444444444444444444 4444555555555
Q ss_pred cccchhhHHHHHHHHHHhh
Q 031810 91 CPSLEWAYEEMMRFQRESF 109 (152)
Q Consensus 91 a~~~~~~~~~~~~~l~~~~ 109 (152)
|+ ..++.+++++|.+.+
T Consensus 197 A~--~~~~~~~v~~Ll~~g 213 (285)
T 3d9h_A 197 AC--ENQQRACVKKLLESG 213 (285)
T ss_dssp HH--HTTCHHHHHHHHHTT
T ss_pred HH--HcCcHHHHHHHHHCC
Confidence 54 222244555554443
No 81
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.80 E-value=1.7e-19 Score=121.88 Aligned_cols=100 Identities=20% Similarity=0.279 Sum_probs=86.6
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcC-CCCCCCCCCCCCCC
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLL-ERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENG-AFLPDDINDSRFNP 86 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll-~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-a~~~~~~~~~~g~t 86 (152)
.+|..|.||||+|+..|+.+++++|+ ..+.+++..+.. |.||||+|+..++.+++++|++.| +++ +.++..|.|
T Consensus 67 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~g~t 142 (201)
T 3hra_A 67 LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRY--GGNALIPAAEKGHIDNVKLLLEDGREDI--DFQNDFGYT 142 (201)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTT--SCCSHHHHHHTTCHHHHHHHHHHCCCCT--TCCCTTSCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCC--CCcHHHHHHHcCCHHHHHHHHHcCCCCc--CCCCCCCCC
Confidence 34889999999999999999999999 566789988887 999999999999999999999999 777 889999999
Q ss_pred cccccccchh---hHHHHHHHHHHhhcCC
Q 031810 87 PLHYCPSLEW---AYEEMMRFQRESFSAG 112 (152)
Q Consensus 87 pl~~a~~~~~---~~~~~~~~l~~~~~~~ 112 (152)
|||+|+..+. ...+++++|.+.+.+.
T Consensus 143 ~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 143 ALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp HHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 9999984432 2368899998887654
No 82
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.80 E-value=7.7e-20 Score=128.34 Aligned_cols=96 Identities=21% Similarity=0.158 Sum_probs=85.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHh---cCCCccccccCCCCchHHHHHHhhCc---------HHHHHHHHHcCCCCCC--
Q 031810 12 SKGVTPLHLAAQGGHLEVMDVLLE---RGADIDARTKGACGWTPLHTAAKERK---------KEAVRFLIENGAFLPD-- 77 (152)
Q Consensus 12 ~~g~t~L~~a~~~g~~~~~~~Ll~---~~~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~ga~~~~-- 77 (152)
..|.||||+|+..|+.+++++|++ .|++++..+.. |+||||+|+..++ .+++++|+++|++++.
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~--g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~ 215 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSR--GNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDT 215 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT--SCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCC--CCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccccccc
Confidence 679999999999999999999999 99999999988 9999999998877 7999999999997743
Q ss_pred ---CCCCCCCCCcccccccchhhHHHHHHHHHHhhcC
Q 031810 78 ---DINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 78 ---~~~~~~g~tpl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+..+..|.||||+|+ ..++.+++++|++.+..
T Consensus 216 ~~~~~~d~~g~tpL~~A~--~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 216 NLEALLNNDGLSPLMMAA--KTGKIGIFQHIIRREIA 250 (260)
T ss_dssp CGGGCCCTTSCCHHHHHH--HTTCHHHHHHHHHHHHH
T ss_pred chhhcccCCCCCHHHHHH--HcCCHHHHHHHHHhCCC
Confidence 568999999999999 44558899999887754
No 83
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.80 E-value=7.7e-20 Score=129.35 Aligned_cols=97 Identities=25% Similarity=0.250 Sum_probs=85.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHh---cCCCccccccCCCCchHHHHHHhhCc---------HHHHHHHHHcCCCCCC--
Q 031810 12 SKGVTPLHLAAQGGHLEVMDVLLE---RGADIDARTKGACGWTPLHTAAKERK---------KEAVRFLIENGAFLPD-- 77 (152)
Q Consensus 12 ~~g~t~L~~a~~~g~~~~~~~Ll~---~~~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~ga~~~~-- 77 (152)
..|.||||+|+..|+.+++++|++ .|++++..+.. |+||||+|+..++ .+++++|++.|++++.
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~--g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~ 223 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSV--GNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTL 223 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT--SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCC--CCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccc
Confidence 479999999999999999999999 99999999988 9999999999887 7999999999998732
Q ss_pred ---CCCCCCCCCcccccccchhhHHHHHHHHHHhhcCC
Q 031810 78 ---DINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 78 ---~~~~~~g~tpl~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
+.+|..|.||||+|+ ..++.+++++|++.+...
T Consensus 224 ~~~~~~d~~g~TpL~~A~--~~g~~~iv~~Ll~~ga~d 259 (273)
T 2pnn_A 224 KLEEITNRKGLTPLALAA--SSGKIGVLAYILQREIHE 259 (273)
T ss_dssp CGGGCCCTTSCCHHHHHH--HTTCHHHHHHHHHHHTC-
T ss_pred ccccccCCCCCCHHHHHH--HhChHHHHHHHHHCCCCC
Confidence 258999999999999 445589999999988753
No 84
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=7.1e-19 Score=120.92 Aligned_cols=90 Identities=27% Similarity=0.295 Sum_probs=48.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcC-CCCCCCCCCCCCCCccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENG-AFLPDDINDSRFNPPLH 89 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-a~~~~~~~~~~g~tpl~ 89 (152)
|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|++.| +++ +.++..|.||||
T Consensus 104 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~d~~g~t~L~ 179 (228)
T 2dzn_A 104 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKF--NQIPLHRAASVGSLKLIELLCGLGKSAV--NWQDKQGWTPLF 179 (228)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT--SCCHHHHHHHTTCHHHHHHHHTTTCCCS--CCCCTTSCCHHH
T ss_pred CcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCC--CCCHHHHHHHcCCHHHHHHHHhcCcccc--cCcCCCCCCHHH
Confidence 455555555555555555555555555555555544 555555555555555555555555 444 445555555555
Q ss_pred ccccchhhHHHHHHHHH
Q 031810 90 YCPSLEWAYEEMMRFQR 106 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~ 106 (152)
+|+ ..++.+++++|.
T Consensus 180 ~A~--~~~~~~~v~~Ll 194 (228)
T 2dzn_A 180 HAL--AEGHGDAAVLLV 194 (228)
T ss_dssp HHH--HTTCHHHHHHHH
T ss_pred HHH--HcCCHHHHHHHH
Confidence 555 222345555554
No 85
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.80 E-value=7.8e-19 Score=121.20 Aligned_cols=98 Identities=28% Similarity=0.319 Sum_probs=83.8
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-----cccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCC
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADI-----DARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDS 82 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~-----~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~ 82 (152)
+.+|..|.||||+|+..|+.+++++|++.|+++ +..+.. |+||||+|+..|+.+++++|+++|+++ +..+.
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~ 106 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYE--GQTALHIAVINQNVNLVRALLARGASV--SARAT 106 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTT--TCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCC--CcCHHHHHHHcCCHHHHHHHHhCCCCC--CcccC
Confidence 345899999999999999999999999999887 455555 999999999999999999999999988 55544
Q ss_pred -------------CCCCcccccccchhhHHHHHHHHHHhhcC
Q 031810 83 -------------RFNPPLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 83 -------------~g~tpl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
.|.||||+|+ ..++.+++++|.+.+.+
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~ga~ 146 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAA--CVGSEEIVRLLIEHGAD 146 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHH--HHTCHHHHHHHHHTTCC
T ss_pred CcceeecccccccCCCCHHHHHH--HcCCHHHHHHHHHCCCC
Confidence 7999999998 44457899999987655
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=6.8e-20 Score=122.83 Aligned_cols=81 Identities=35% Similarity=0.445 Sum_probs=76.2
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc-cCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART-KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP 87 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tp 87 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+ .. |+||||+|+..++.+++++|+++|+++ +.+|..|.||
T Consensus 71 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~--g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~tp 146 (183)
T 3deo_A 71 AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG--GLTALHMAAGYVRPEVVEALVELGADI--EVEDERGLTA 146 (183)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS--SCCHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTSCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC--CCCHHHHHHhcCcHHHHHHHHHcCCCC--cCCCCCCCCH
Confidence 358999999999999999999999999999999887 66 999999999999999999999999988 8899999999
Q ss_pred cccccc
Q 031810 88 LHYCPS 93 (152)
Q Consensus 88 l~~a~~ 93 (152)
||+|+.
T Consensus 147 l~~A~~ 152 (183)
T 3deo_A 147 LELARE 152 (183)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999984
No 87
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.79 E-value=1e-19 Score=129.96 Aligned_cols=92 Identities=16% Similarity=0.143 Sum_probs=56.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCC-CCcccccc
Q 031810 14 GVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRF-NPPLHYCP 92 (152)
Q Consensus 14 g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g-~tpl~~a~ 92 (152)
|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +..+..| .||||+|+
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~~t~L~~A~ 137 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDK--GNTALYYAVDSGNMQTVKLFVKKNWRL--MFYGKTGWKTSFYHAV 137 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHHCGGG--GGCSSSGGGSHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC--CCcHHHHHHHcCCHHHHHHHHhcCCCC--CccCCCCCCCHHHHHH
Confidence 666666666666666666666666666665555 666666666666666666666666655 5566666 56666665
Q ss_pred cchhhHHHHHHHHHHhhcC
Q 031810 93 SLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~~ 111 (152)
. .++.+++++|.+.+..
T Consensus 138 ~--~~~~~~v~~Ll~~g~~ 154 (285)
T 3kea_A 138 M--LNDVSIVSYFLSEIPS 154 (285)
T ss_dssp H--TTCHHHHHHHHTTSCT
T ss_pred H--cCCHHHHHHHHhCCCc
Confidence 2 2335566666655433
No 88
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.79 E-value=9.8e-19 Score=124.33 Aligned_cols=94 Identities=22% Similarity=0.329 Sum_probs=75.8
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CccccccC------------------------------------CCCchH
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGA-DIDARTKG------------------------------------ACGWTP 52 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~-~~~~~~~~------------------------------------~~g~t~ 52 (152)
+|.+|.||||+|+..|+.+++++|++.|+ +++..+.. ..|+||
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tp 186 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTA 186 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCH
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCH
Confidence 48889999999999999999999999887 66554432 127788
Q ss_pred HHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchhhHHHHHHHHHH
Q 031810 53 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 107 (152)
Q Consensus 53 l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~l~~ 107 (152)
||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+ ..++.+++++|++
T Consensus 187 Lh~A~~~g~~~~v~~Ll~~gad~--n~~d~~G~TpLh~A~--~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 187 LMLAVSHGRVDVVKALLACEADV--NVQDDDGSTALMCAC--EHGHKEIAGLLLA 237 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHH--HHTCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhCCCCC--CCCCCCCCCHHHHHH--HCCCHHHHHHHHh
Confidence 88888888888888888888877 778888888888888 4444788888887
No 89
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.79 E-value=1.4e-19 Score=126.91 Aligned_cols=95 Identities=27% Similarity=0.269 Sum_probs=84.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHh---cCCCccccccCCCCchHHHHHHh--hCcHH-------HHHHHHHcCCCCCC---
Q 031810 13 KGVTPLHLAAQGGHLEVMDVLLE---RGADIDARTKGACGWTPLHTAAK--ERKKE-------AVRFLIENGAFLPD--- 77 (152)
Q Consensus 13 ~g~t~L~~a~~~g~~~~~~~Ll~---~~~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~ga~~~~--- 77 (152)
.|.||||+|+..|+.+++++|++ .|++++..+.. |+||||+|+. .++.+ ++++|+++|++++.
T Consensus 135 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~--g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~ 212 (256)
T 2etb_A 135 FGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSL--GNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 212 (256)
T ss_dssp SCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT--SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCC--CCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccc
Confidence 49999999999999999999999 99999999988 9999999998 77888 99999999997632
Q ss_pred --CCCCCCCCCcccccccchhhHHHHHHHHHHhhcC
Q 031810 78 --DINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 78 --~~~~~~g~tpl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+.+|..|.||||+|+ ..++.+++++|++.+..
T Consensus 213 ~~~~~d~~g~tpL~~A~--~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 213 LEEISNHQGLTPLKLAA--KEGKIEIFRHILQREFS 246 (256)
T ss_dssp GGGCCCTTSCCHHHHHH--HTTCHHHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHH--HhCCHHHHHHHHhCCCC
Confidence 568999999999999 44558899999887754
No 90
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.79 E-value=2.6e-19 Score=131.39 Aligned_cols=97 Identities=28% Similarity=0.327 Sum_probs=88.4
Q ss_pred CCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCC-----CCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQGG--HLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAF-----LPDDINDS 82 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g--~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~-----~~~~~~~~ 82 (152)
+|..|.||||+|+..| +.+++++|++.|++++..+.. |+||||+|+..|+.+++++|++.|++ + +..+.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~--g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~~~~~ 209 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKA--DETPLMRAMEFRNREALDLMMDTVPSKSSLRL--DYANK 209 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT--TCCCT
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCC--CCCHHHHHHHcCCHHHHHHHHhcccccccccc--cccCC
Confidence 4778999999999999 999999999999999999887 99999999999999999999999998 6 88999
Q ss_pred CCCCcccccccchhhHHHHHHHHHHhhcCC
Q 031810 83 RFNPPLHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 83 ~g~tpl~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
.|.||||+|+. .++.+++++|++.+.+.
T Consensus 210 ~g~t~L~~A~~--~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 210 QGNSHLHWAIL--INWEDVAMRFVEMGIDV 237 (364)
T ss_dssp TCCCTTHHHHT--TTCHHHHHHHHTTTCCT
T ss_pred CCCcHHHHHHH--cCCHHHHHHHHHcCCCC
Confidence 99999999994 44578999999887553
No 91
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.79 E-value=3e-19 Score=129.76 Aligned_cols=96 Identities=20% Similarity=0.178 Sum_probs=81.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCc---HHHHHHHHHcC-CCCCCCCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERK---KEAVRFLIENG-AFLPDDINDSRFN 85 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~Ll~~g-a~~~~~~~~~~g~ 85 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+ .++++.|++.+ +++ +.++..|.
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~--g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~--~~~d~~g~ 202 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM--GESCLVKAVKSVNNYDSGTFEALLDYLYPCL--ILEDSMNR 202 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTT--CCCHHHHHHHSSHHHHTTCHHHHHHHHGGGG--GEECTTCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHhcccccHHHHHHHHHhhhccc--cCCCCCCC
Confidence 4899999999999999999999999999999999888 9999999999988 67777777776 555 88999999
Q ss_pred Ccccccccch--hhHHHHHHHHHHhh
Q 031810 86 PPLHYCPSLE--WAYEEMMRFQRESF 109 (152)
Q Consensus 86 tpl~~a~~~~--~~~~~~~~~l~~~~ 109 (152)
||||+|+... .+..+++++|.+..
T Consensus 203 tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 203 TILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp CHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHccccccHHHHHHHHHHH
Confidence 9999998411 34467888777653
No 92
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.78 E-value=3.7e-18 Score=120.39 Aligned_cols=96 Identities=24% Similarity=0.277 Sum_probs=82.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 90 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~ 90 (152)
+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +..+..|.||||+
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~ 111 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKN--GATPFLLAAIAGSVKLLKLFLSKGADV--NECDFYGFTAFME 111 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHHTCHHHHHHHHHTTCCT--TCBCTTCCBHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCcccCCHHHH
Confidence 677899999999999999999999999999888877 899999999999999999999999977 7888899999999
Q ss_pred cccchhhHHHHHHHHHHhhcCC
Q 031810 91 CPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 91 a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
|+. .++.+++++|.+.+...
T Consensus 112 A~~--~~~~~~~~~Ll~~g~~~ 131 (285)
T 1wdy_A 112 AAV--YGKVKALKFLYKRGANV 131 (285)
T ss_dssp HHH--TTCHHHHHHHHHTTCCT
T ss_pred HHH--hCCHHHHHHHHHhCCCc
Confidence 984 44478888888876553
No 93
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.78 E-value=3.4e-18 Score=118.25 Aligned_cols=57 Identities=40% Similarity=0.551 Sum_probs=21.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHc
Q 031810 13 KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIEN 71 (152)
Q Consensus 13 ~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 71 (152)
.|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|++.
T Consensus 43 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~~~~Ll~~ 99 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAE--GSTCLHLAAKKGHYEVVQYLLSN 99 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTT--SCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCC--CCcHHHHHHHcCCHHHHHHHHhC
Confidence 3333333333333333333333333333333332 33333333333333333333333
No 94
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.78 E-value=2.4e-18 Score=128.91 Aligned_cols=96 Identities=33% Similarity=0.427 Sum_probs=79.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +..+..|.||||
T Consensus 43 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~t~L~ 118 (437)
T 1n11_A 43 SNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKD--DQTPLHCAARIGHTNMVKLLLENNANP--NLATTAGHTPLH 118 (437)
T ss_dssp SSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTT--SCCHHHHHHHHTCHHHHHHHHHHTCCT--TCCCTTCCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC--CCCHHHHHHHCCCHHHHHHHHhCCCCC--CCCCCCCCcHHH
Confidence 4778889999999999999999999999888888877 889999999999999999999998877 778888888988
Q ss_pred ccccchhhHHHHHHHHHHhhcC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+|+ ..+..+++++|.+....
T Consensus 119 ~A~--~~g~~~~v~~Ll~~~~~ 138 (437)
T 1n11_A 119 IAA--REGHVETVLALLEKEAS 138 (437)
T ss_dssp HHH--HHTCHHHHHHHHHTTCC
T ss_pred HHH--HcCCHHHHHHHHhCCCC
Confidence 888 34446777777766543
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=1.3e-19 Score=126.77 Aligned_cols=94 Identities=30% Similarity=0.269 Sum_probs=84.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCC-CCCCCcccc
Q 031810 12 SKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDIND-SRFNPPLHY 90 (152)
Q Consensus 12 ~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~-~~g~tpl~~ 90 (152)
..|.||||+|++.|+.++++.|++ |++++..+.. |+||||+|+..|+.+++++|+++|+++ +.++ ..|.||||+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN--GRTALLFVAGLGSDKCVRLLAEAGADL--DHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT--SCBHHHHHHHHTCHHHHHHHHHTTCCT--TCCCSSSCCCHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHcCCCC--CcCCCCCCCCHHHH
Confidence 468999999999999999999999 9999999887 999999999999999999999999988 7777 789999999
Q ss_pred cccchhhHHHHHHHHHHhhcCC
Q 031810 91 CPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 91 a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
|+. .++.+++++|.+.+...
T Consensus 118 A~~--~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 118 AAG--YVRPEVVEALVELGADI 137 (244)
T ss_dssp HHH--TTCHHHHHHHHHTTCCT
T ss_pred HHH--cCCHHHHHHHHHCCCCC
Confidence 994 44578999999886553
No 96
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.77 E-value=1.8e-18 Score=125.41 Aligned_cols=96 Identities=26% Similarity=0.295 Sum_probs=77.3
Q ss_pred CCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQG---GHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNP 86 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~---g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~t 86 (152)
.+..|.||||+|+.. +..+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|.|
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~--n~~d~~g~t 282 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKD--FMTPLHVAAERAHNDVMEVLHKHGAKM--NALDSLGQT 282 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCC
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCC
Confidence 467788888888887 4468888888888888887776 888888888888888888888888877 778888888
Q ss_pred cccccccchhhHHHHHHHHHHhhcC
Q 031810 87 PLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 87 pl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|||+|+ ..++.+++++|.+.+.+
T Consensus 283 ~L~~A~--~~~~~~~v~~Ll~~gad 305 (351)
T 3utm_A 283 ALHRAA--LAGHLQTCRLLLSYGSD 305 (351)
T ss_dssp HHHHHH--HHTCHHHHHHHHHTTCC
T ss_pred HHHHHH--HcCcHHHHHHHHHcCCC
Confidence 888887 44457788888887655
No 97
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.77 E-value=1.2e-18 Score=128.65 Aligned_cols=95 Identities=25% Similarity=0.333 Sum_probs=86.7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERG-ADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
+|..|.||||+|+..|+.+++++|++.+ ++++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|.|||
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~--g~TpL~~A~~~g~~~iv~~Ll~~gad~--~~~d~~g~t~l 350 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED--GKTPIMLAAQEGRIEVVMYLIQQGASV--EAVDATDHTAR 350 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTT--CCCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCSSSCCHH
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cCCCCCCCCHH
Confidence 4778999999999999999999999876 999999888 999999999999999999999999988 88999999999
Q ss_pred cccccchhhHHHHHHHHHHhhc
Q 031810 89 HYCPSLEWAYEEMMRFQRESFS 110 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~ 110 (152)
|+|+ ..++.+++++|.+...
T Consensus 351 ~~A~--~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 351 QLAQ--ANNHHNIVDIFDRCRP 370 (373)
T ss_dssp HHHH--HTTCHHHHHHHHTTC-
T ss_pred HHHH--HcCCHHHHHHHHhcCc
Confidence 9998 4455899999988764
No 98
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.77 E-value=3.2e-18 Score=122.09 Aligned_cols=79 Identities=33% Similarity=0.480 Sum_probs=75.6
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
.+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|.||||
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~--g~tpL~~A~~~~~~~~v~~Ll~~gad~--~~~d~~g~t~l~ 270 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD--GWTPLHAAAHWGKEEACRILVENLCDM--EAVNKVGQTAFD 270 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCTTT
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCC--CCcHHHHHHhcCCHHHHHHHHHcCCCC--CCcCCCCCCHHH
Confidence 4678999999999999999999999999999999887 999999999999999999999999988 889999999999
Q ss_pred ccc
Q 031810 90 YCP 92 (152)
Q Consensus 90 ~a~ 92 (152)
+|+
T Consensus 271 ~A~ 273 (299)
T 1s70_B 271 VAD 273 (299)
T ss_dssp SCC
T ss_pred HHH
Confidence 997
No 99
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=3.9e-18 Score=120.29 Aligned_cols=133 Identities=23% Similarity=0.223 Sum_probs=91.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccccCCCCchHHHHHHhhCc----HHHHHHHHHcCCCCCCCCCCCCCC
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLER-GADIDARTKGACGWTPLHTAAKERK----KEAVRFLIENGAFLPDDINDSRFN 85 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~ga~~~~~~~~~~g~ 85 (152)
+..|.||||+|+..|+.+++++|++. |++++..+.. |+||||+|+..++ .+++++|++.|+++ +.++..|.
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~--g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~--~~~~~~g~ 220 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM--GRNALIHALLSSDDSDVEAITHLLLDHGADV--NVRGERGK 220 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTT--SCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS--SCCCTTSC
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCC--CCCHHHHHHHccccchHHHHHHHHHHcCCCC--CCcCCCCC
Confidence 66788888888888888888888876 8888877776 8888888888887 78888888888877 77788888
Q ss_pred CcccccccchhhHHHHHHHHHH-hhcCC-CccCCchhhhHHHHHHhhhhhHHHhhhcCCccccccc
Q 031810 86 PPLHYCPSLEWAYEEMMRFQRE-SFSAG-ETSYSSEKLNALSRLLVHMMPLLWLDLASDAVLSVDH 149 (152)
Q Consensus 86 tpl~~a~~~~~~~~~~~~~l~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 149 (152)
||||+|+ ..++.+++++|.+ .+... .....+......+....+...+.++...+..+..+|+
T Consensus 221 t~L~~A~--~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 221 TPLILAV--EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp CHHHHHH--HTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred cHHHHHH--HcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 8888887 3344677777777 33322 1222222233333334555566666666666666654
No 100
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.76 E-value=4.1e-18 Score=125.79 Aligned_cols=99 Identities=19% Similarity=0.168 Sum_probs=80.4
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcC---CCCCCCCCCCCCC
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENG---AFLPDDINDSRFN 85 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g---a~~~~~~~~~~g~ 85 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|++.+ +++ +..+..|.
T Consensus 161 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~d~~g~ 236 (373)
T 2fo1_E 161 AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS--ERSALHQAAANRDFGMMVYMLNSTKLKGDI--EELDRNGM 236 (373)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT--CCCHHHHHHHTTCHHHHHHHTTSHHHHHTT--SCCCTTSC
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCC--CCCHHHHHHHCCCHHHHHHHHhcCccccCh--hhcCCCCC
Confidence 34888999999999999999999999999999988877 889999999888888888888877 666 77788888
Q ss_pred Ccccccccch-hhHHHHHHHHHHhhcC
Q 031810 86 PPLHYCPSLE-WAYEEMMRFQRESFSA 111 (152)
Q Consensus 86 tpl~~a~~~~-~~~~~~~~~l~~~~~~ 111 (152)
||||+|+..+ ....+++++|.+.+..
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll~~g~~ 263 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLVEKGAK 263 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHHHHTCC
T ss_pred CHHHHHHHhCCcchHHHHHHHHHCCCC
Confidence 8888887432 1156777777777654
No 101
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.75 E-value=3.1e-18 Score=124.40 Aligned_cols=100 Identities=24% Similarity=0.294 Sum_probs=70.4
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHc-CCCCC
Q 031810 2 DVNVAAWGPKSKGVTPLHLAAQGGH----LEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIEN-GAFLP 76 (152)
Q Consensus 2 d~n~~~~~~d~~g~t~L~~a~~~g~----~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-ga~~~ 76 (152)
|+|.. |..|.|++++++..+. ..++++|++.|++++.++.. |+||||+|+..++.++++.|+.. |+++
T Consensus 194 d~n~~----d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~--g~t~L~~a~~~~~~~~v~~Ll~~~~~~v- 266 (337)
T 4g8k_A 194 DVNAC----DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER--GKTPLILAVEKKHLGLVQRLLEQEHIEI- 266 (337)
T ss_dssp CTTCC----CTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGG--GCCHHHHHHHTTCHHHHHHHHTSTTCCT-
T ss_pred CcCcc----CCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCC--CCCHHHHHHHhhhhHHHHHHHHhcCCcc-
Confidence 45554 6777888777665432 34667777888888777776 77888888888888887777764 6666
Q ss_pred CCCCCCCCCCcccccccchhhHHHHHHHHHHhhcC
Q 031810 77 DDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 77 ~~~~~~~g~tpl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+.+|..|+||||+|+ ..++.+++++|++.+.+
T Consensus 267 -n~~d~~G~TpL~~A~--~~g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 267 -NDTDSDGKTALLLAV--ELKLKKIAELLCKRGAS 298 (337)
T ss_dssp -TCBCTTSCBHHHHHH--HTTCHHHHHHHHTTSCS
T ss_pred -cCcCCCCCCHHHHHH--HcCCHHHHHHHHHCCCC
Confidence 777778888888887 33446777777776544
No 102
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.72 E-value=1.2e-16 Score=110.05 Aligned_cols=97 Identities=22% Similarity=0.274 Sum_probs=72.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 89 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~ 89 (152)
+|..|.||||+|+..|+.+++++|++.|++++..... .|+||||+|+..++.+++++|++.|+++ +..+..|.||||
T Consensus 38 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~~~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~ 114 (240)
T 3eu9_A 38 PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGD-LNSTPLHWATRQGHLSMVVQLMKYGADP--SLIDGEGCSCIH 114 (240)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT-TTBCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCC-cCCChhHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHH
Confidence 4777888888888888888888888888777644322 2678888888888888888888888876 777778888888
Q ss_pred ccccchhhHHHHHHHHHHhhcC
Q 031810 90 YCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 90 ~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
+|+.. +..+++++|.+.+..
T Consensus 115 ~A~~~--~~~~~~~~Ll~~~~~ 134 (240)
T 3eu9_A 115 LAAQF--GHTSIVAYLIAKGQD 134 (240)
T ss_dssp HHHHT--TCHHHHHHHHHTTCC
T ss_pred HHHHc--CHHHHHHHHHhcCCC
Confidence 88733 346777777776544
No 103
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.72 E-value=9.7e-18 Score=121.83 Aligned_cols=49 Identities=24% Similarity=0.227 Sum_probs=27.7
Q ss_pred ccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 031810 40 IDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 92 (152)
Q Consensus 40 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~a~ 92 (152)
++..+.. |+||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus 276 ~n~~d~~--G~TpLh~A~~~g~~~~v~~Ll~~Gad~--~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 276 LNAQDSN--GDTCLNIAARLGNISIVDALLDYGADP--FIANKSGLRPVDFGA 324 (327)
T ss_dssp TTCCCTT--SCCHHHHHHHHCCHHHHHHHHHTTCCT--TCCCTTSCCGGGGTC
T ss_pred CCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHH
Confidence 4444444 555666666555556666665555555 555555566665555
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.72 E-value=3.9e-17 Score=97.79 Aligned_cols=65 Identities=52% Similarity=0.846 Sum_probs=61.1
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCC
Q 031810 8 WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAF 74 (152)
Q Consensus 8 ~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~ 74 (152)
+.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|++
T Consensus 29 n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~--g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 29 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN--GRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 345899999999999999999999999999999999888 99999999999999999999999974
No 105
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.71 E-value=1e-16 Score=110.52 Aligned_cols=99 Identities=22% Similarity=0.209 Sum_probs=86.2
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 88 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl 88 (152)
..|..|.|||+.|+..|+.++++.|++.|++++..+.. |.||||+|+..|+.+++++|++.|++++ ...+..|.|||
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~~t~L 80 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKE--NVTLLHWAAINNRIDLVKYYISKGAIVD-QLGGDLNSTPL 80 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTTBCHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCC--CCCHHHHHHHhCCHHHHHHHHHcCCcch-hhcCCcCCChh
Confidence 34888999999999999999999999999999998887 9999999999999999999999999873 34455699999
Q ss_pred cccccchhhHHHHHHHHHHhhcCC
Q 031810 89 HYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 89 ~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
|+|+ ..+..+++++|.+.+...
T Consensus 81 ~~A~--~~~~~~~v~~Ll~~g~~~ 102 (240)
T 3eu9_A 81 HWAT--RQGHLSMVVQLMKYGADP 102 (240)
T ss_dssp HHHH--HHTCHHHHHHHHHTTCCT
T ss_pred HHHH--HcCCHHHHHHHHHcCCCC
Confidence 9998 444578999998876543
No 106
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.71 E-value=1.1e-16 Score=116.25 Aligned_cols=93 Identities=27% Similarity=0.363 Sum_probs=60.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCccccccCCCCchHHHHHHhhCc----HHHHHHHHHcCCCCCCCCCCCCC
Q 031810 10 PKSKGVTPLHLAAQGGHLEVMDVLLE-RGADIDARTKGACGWTPLHTAAKERK----KEAVRFLIENGAFLPDDINDSRF 84 (152)
Q Consensus 10 ~d~~g~t~L~~a~~~g~~~~~~~Ll~-~~~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~ga~~~~~~~~~~g 84 (152)
.+..|.||||+|+..|+.+++++|++ .|++++..+.. |.|++|.++..+. ..++++|+++|+++ +.++..|
T Consensus 164 ~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~--g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~--n~~d~~g 239 (337)
T 4g8k_A 164 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM--GRNALIHALLSSDDSDVEAITHLLLDHGADV--NVRGERG 239 (337)
T ss_dssp CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTT--SCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT--TCCCGGG
T ss_pred ccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCC--CCcHHHHHHHHcCcccHHHHHHHHHHCCCCC--CCcCCCC
Confidence 35667777777777777777777774 46777776666 6777776654432 34667777777766 6667777
Q ss_pred CCcccccccchhhHHHHHHHHHHh
Q 031810 85 NPPLHYCPSLEWAYEEMMRFQRES 108 (152)
Q Consensus 85 ~tpl~~a~~~~~~~~~~~~~l~~~ 108 (152)
.||||+|+. .+..+++++|.+.
T Consensus 240 ~t~L~~a~~--~~~~~~v~~Ll~~ 261 (337)
T 4g8k_A 240 KTPLILAVE--KKHLGLVQRLLEQ 261 (337)
T ss_dssp CCHHHHHHH--TTCHHHHHHHHTS
T ss_pred CCHHHHHHH--hhhhHHHHHHHHh
Confidence 777777763 3335566666554
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.69 E-value=1.8e-16 Score=121.13 Aligned_cols=124 Identities=21% Similarity=0.174 Sum_probs=94.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccc------ccCCCCchHHHHHHh---hCcHHHHHHHHHcCCCCCCCCCCCCCC
Q 031810 15 VTPLHLAAQGGHLEVMDVLLERGADIDAR------TKGACGWTPLHTAAK---ERKKEAVRFLIENGAFLPDDINDSRFN 85 (152)
Q Consensus 15 ~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~------~~~~~g~t~l~~a~~---~~~~~~~~~Ll~~ga~~~~~~~~~~g~ 85 (152)
.+.||.|+..|+.+.++.|++.|++++.. +.. |+||||+||. .|+.+++++|+++|+++ +.+|..|.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~--g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v--n~~d~~g~ 208 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAP--EELVLHLAVKVANQASLPLVDFIIQNGGHL--DAKAADGN 208 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCS--CBCHHHHHHHTCCTTTHHHHHHHHHHSCCT--TCCCSSSC
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccc--cchHHHHHHHhcccccHHHHHHHHHcCCCC--CccCCCCC
Confidence 46799999999999999999999999876 555 9999999976 89999999999999988 89999999
Q ss_pred CcccccccchhhHHHHHHHHHHhhcCCCc-cCCchhhhHHHHHHhhhhhHHHhhhcCCcc
Q 031810 86 PPLHYCPSLEWAYEEMMRFQRESFSAGET-SYSSEKLNALSRLLVHMMPLLWLDLASDAV 144 (152)
Q Consensus 86 tpl~~a~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (152)
||||+|+.. ++.+++++|++.+.+... ...+......+....+...+.++...+..+
T Consensus 209 TpLh~A~~~--g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 209 TALHYAALY--NQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp CHHHHHTTT--TCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred cHHHHHHHc--CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 999999944 457899999998766332 223333333333344444444444444433
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.68 E-value=1.1e-16 Score=118.20 Aligned_cols=96 Identities=25% Similarity=0.192 Sum_probs=84.3
Q ss_pred CCCcHHHHHHHc-CCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCCccccc
Q 031810 13 KGVTPLHLAAQG-GHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYC 91 (152)
Q Consensus 13 ~g~t~L~~a~~~-g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~tpl~~a 91 (152)
.+.|+||.|+.. ++.++++.|++.|++++..+....|+||||+|+..++.+++++|+++|+++ +..|..|.||||+|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv--n~~d~~G~TpLh~A 275 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV--NQADSAGRGPLHHA 275 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHH
Confidence 356799999999 999999999999999998883223999999999999999999999999988 88999999999999
Q ss_pred ccchhhHHHHHHHHHHhhcCC
Q 031810 92 PSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~~~ 112 (152)
+ ..++.+++++|++.+...
T Consensus 276 ~--~~g~~~~v~~LL~~Gad~ 294 (368)
T 3jue_A 276 T--ILGHTGLACLFLKRGADL 294 (368)
T ss_dssp H--HHTCHHHHHHHHHTTCCT
T ss_pred H--HcCcHHHHHHHHHCcCCC
Confidence 8 444578999999886553
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.68 E-value=2.1e-17 Score=102.57 Aligned_cols=78 Identities=38% Similarity=0.543 Sum_probs=69.7
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCCCCCCCCC
Q 031810 7 AWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNP 86 (152)
Q Consensus 7 ~~~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~~~g~t 86 (152)
.+.+|..|.||||+|+..++.+++++|++.|++++..+.. |+||||+|+..++.+++++|+++|+++ +.++..|.+
T Consensus 35 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~--g~tpl~~A~~~~~~~~~~~Ll~~ga~~--n~~~~~~~~ 110 (115)
T 2l6b_A 35 VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKD--GNTPEHLAKKNGHHEIVKLLDAKGADV--NARSWGSSH 110 (115)
T ss_dssp SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTT--CCCTTHHHHTTTCHHHHHHHHTTSSSH--HHHSCCCC-
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCC--CCCHHHHHHHCCCHHHHHHHHHcCCCC--CcCCccccc
Confidence 3345889999999999999999999999999999999887 999999999999999999999999988 888888888
Q ss_pred cc
Q 031810 87 PL 88 (152)
Q Consensus 87 pl 88 (152)
|-
T Consensus 111 ~~ 112 (115)
T 2l6b_A 111 HH 112 (115)
T ss_dssp --
T ss_pred cc
Confidence 74
No 110
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.65 E-value=6.2e-16 Score=111.33 Aligned_cols=93 Identities=22% Similarity=0.217 Sum_probs=81.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccc------cccCCCCchHHHHHHhh---CcHHHHHHHHHcCCCCCCCCCCCCC
Q 031810 14 GVTPLHLAAQGGHLEVMDVLLERGADIDA------RTKGACGWTPLHTAAKE---RKKEAVRFLIENGAFLPDDINDSRF 84 (152)
Q Consensus 14 g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~------~~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~ga~~~~~~~~~~g 84 (152)
+.++|+.|+..|+.+.++.|++.|++++. .+.. |+||||+|+.. ++.+++++|++.|+++ +.+|..|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~--g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv--n~~d~~G 226 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAP--EELVLHLAVKVANQASLPLVDFIIQNGGHL--DAKAADG 226 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSC--EECHHHHHHHTCCTTTHHHHHHHHHHSSCT--TCCCTTC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCC--CccHHHHHHHhcccCcHHHHHHHHhcCCCC--CCCCCCC
Confidence 45679999999999999999999999987 4655 99999999997 8999999999999988 8899999
Q ss_pred CCcccccccchhhHHHHHHHHHHhhcCC
Q 031810 85 NPPLHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 85 ~tpl~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
.||||+|+. .++.+++++|++.+.+.
T Consensus 227 ~TpLh~A~~--~g~~~~v~~Ll~~gad~ 252 (301)
T 2b0o_E 227 NTALHYAAL--YNQPDCLKLLLKGRALV 252 (301)
T ss_dssp CCHHHHHHH--TTCHHHHHHHHHTTCCC
T ss_pred CCHHHHHHH--cCCHHHHHHHHHcCCCC
Confidence 999999994 44578999999886653
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.62 E-value=3.8e-15 Score=106.10 Aligned_cols=92 Identities=21% Similarity=0.239 Sum_probs=79.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCccc------cccCCCCchHHHHHHhh---CcHHHHHHHHHcCCCCCCCCCCCCCC
Q 031810 15 VTPLHLAAQGGHLEVMDVLLERGADIDA------RTKGACGWTPLHTAAKE---RKKEAVRFLIENGAFLPDDINDSRFN 85 (152)
Q Consensus 15 ~t~L~~a~~~g~~~~~~~Ll~~~~~~~~------~~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~ga~~~~~~~~~~g~ 85 (152)
.++|+.|+..|+.+.+..+++.|++++. .+.. |+||||+|+.. ++.+++++|+++|+++ +.+|..|.
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~--g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i--n~~d~~g~ 206 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEP--DETALHLAVRSVDRTSLHIVDFLVQNSGNL--DKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSST--TCBHHHHHHHHCCTTTHHHHHHHHHHCSCT--TCCCTTCC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccC--CCCcchHHHHhcccchHHHHHHHHHCCCCc--cccCCCCC
Confidence 4689999999999999999999998553 3555 99999999999 8999999999999988 88999999
Q ss_pred CcccccccchhhHHHHHHHHHHhhcCC
Q 031810 86 PPLHYCPSLEWAYEEMMRFQRESFSAG 112 (152)
Q Consensus 86 tpl~~a~~~~~~~~~~~~~l~~~~~~~ 112 (152)
||||+|+. .++.+++++|.+.+.+.
T Consensus 207 TpLh~A~~--~g~~~~v~~Ll~~gad~ 231 (278)
T 1dcq_A 207 TALHYCCL--TDNAECLKLLLRGKASI 231 (278)
T ss_dssp CHHHHHHH--TTCHHHHHHHHHTTCCT
T ss_pred CHHHHHHH--cCCHHHHHHHHHcCCCC
Confidence 99999994 44578999999877653
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.57 E-value=5.4e-17 Score=120.17 Aligned_cols=91 Identities=15% Similarity=0.214 Sum_probs=66.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCc---cccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCCCCC--CCCCCC
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADI---DARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDI--NDSRFN 85 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~---~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~--~~~~g~ 85 (152)
+..|.||||+|+..|+.+++++|++.|+++ +..+. ++||||+|+..|+.+++++|+++|+++ .. .+..|.
T Consensus 125 ~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~---~~TpLh~Aa~~G~~eiv~~Ll~~ga~~--~~~~~d~~g~ 199 (376)
T 2aja_A 125 QAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE---NYHAFRLAAENGHLHVLNRLCELAPTE--ATAMIQAENY 199 (376)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH---HHHHHHHHHHTTCHHHHHHHHHSCGGG--HHHHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCC---CCCHHHHHHHCCCHHHHHHHHHcCCcc--chhccCCCCC
Confidence 445778888888888888888888888652 22222 368888888888888888888888865 44 666778
Q ss_pred Ccccccc-cchhhHHHHHHHHHHh
Q 031810 86 PPLHYCP-SLEWAYEEMMRFQRES 108 (152)
Q Consensus 86 tpl~~a~-~~~~~~~~~~~~l~~~ 108 (152)
||||+|+ ..+. .+++++|.+.
T Consensus 200 TpL~~Aa~~~G~--~eiv~~Ll~~ 221 (376)
T 2aja_A 200 YAFRWAAVGRGH--HNVINFLLDC 221 (376)
T ss_dssp HHHHHHHSTTCC--HHHHHHHTTS
T ss_pred CHHHHHHHHCCC--HHHHHHHHhC
Confidence 8888887 5444 5677666653
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.51 E-value=6.8e-14 Score=86.15 Aligned_cols=58 Identities=41% Similarity=0.649 Sum_probs=54.8
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccCCCCchHHHHHHhhCcHHHHHHH
Q 031810 9 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFL 68 (152)
Q Consensus 9 ~~d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 68 (152)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..++.+++++|
T Consensus 52 ~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~--g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 52 AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKF--GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccC--CCcHHHHHHHcCCHHHHHHh
Confidence 34889999999999999999999999999999999887 99999999999999999987
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.47 E-value=4e-15 Score=110.15 Aligned_cols=96 Identities=14% Similarity=0.002 Sum_probs=72.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCc---cccccCCCCchHHHHHHhhCcHHHHHHHHHcCCCCC-CCCCCCCCCC
Q 031810 11 KSKGVTPLHLAAQGGHLEVMDVLLERGADI---DARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLP-DDINDSRFNP 86 (152)
Q Consensus 11 d~~g~t~L~~a~~~g~~~~~~~Ll~~~~~~---~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~-~~~~~~~g~t 86 (152)
+..+.||||+|++.|+.+++++|++.|+.. +..+.. |.||||+|+..|+.+++++|+++|+++. .+..+.+ .|
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~--~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~T 165 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE--NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YH 165 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHH--HHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccC--CCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CC
Confidence 445679999999999999999999998722 122334 7899999999999999999999997521 0223333 89
Q ss_pred cccccccchhhHHHHHHHHHHhhcC
Q 031810 87 PLHYCPSLEWAYEEMMRFQRESFSA 111 (152)
Q Consensus 87 pl~~a~~~~~~~~~~~~~l~~~~~~ 111 (152)
|||+|+ ..++.+++++|.+.+..
T Consensus 166 pLh~Aa--~~G~~eiv~~Ll~~ga~ 188 (376)
T 2aja_A 166 AFRLAA--ENGHLHVLNRLCELAPT 188 (376)
T ss_dssp HHHHHH--HTTCHHHHHHHHHSCGG
T ss_pred HHHHHH--HCCCHHHHHHHHHcCCc
Confidence 999999 44558999999987654
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=42.89 E-value=23 Score=16.78 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=12.3
Q ss_pred HHHHHHcCCHHHHHHHHh
Q 031810 18 LHLAAQGGHLEVMDVLLE 35 (152)
Q Consensus 18 L~~a~~~g~~~~~~~Ll~ 35 (152)
+..||..|+++.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 356777788887776653
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=27.78 E-value=1e+02 Score=23.11 Aligned_cols=50 Identities=20% Similarity=0.397 Sum_probs=35.6
Q ss_pred HHcCCHHHHHHHHhcCCCcccc------------ccCCCCchHHHHHHhhCcHHHHHHHHHc
Q 031810 22 AQGGHLEVMDVLLERGADIDAR------------TKGACGWTPLHTAAKERKKEAVRFLIEN 71 (152)
Q Consensus 22 ~~~g~~~~~~~Ll~~~~~~~~~------------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 71 (152)
+..|+...|+.-+..|.+++-. +...-|.|.+|.|+...+.+++..|+..
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 3468888888888777654321 1112278999999999999988888763
Done!