Your job contains 1 sequence.
>031812
MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS
AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH
RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031812
(152 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2199670 - symbol:PFL "POINTED FIRST LEAVES" sp... 689 7.2e-68 1
TAIR|locus:2009066 - symbol:AT1G34030 species:3702 "Arabi... 689 7.2e-68 1
TAIR|locus:2005541 - symbol:RPS18C "S18 ribosomal protein... 689 7.2e-68 1
UNIPROTKB|Q8H590 - symbol:OJ1656_E11.104 "Putative riboso... 651 7.6e-64 1
UNIPROTKB|Q8H588 - symbol:OJ1656_E11.108 "Putative riboso... 632 7.9e-62 1
UNIPROTKB|A8HVP2 - symbol:RPS18 "Ribosomal protein S18" s... 557 7.0e-54 1
ZFIN|ZDB-GENE-020419-20 - symbol:rps18 "ribosomal protein... 545 1.3e-52 1
UNIPROTKB|Q90YQ5 - symbol:rps18 "40S ribosomal protein S1... 540 4.4e-52 1
UNIPROTKB|Q3T0R1 - symbol:RPS18 "40S ribosomal protein S1... 539 5.6e-52 1
UNIPROTKB|Q5TJE9 - symbol:RPS18 "40S ribosomal protein S1... 539 5.6e-52 1
UNIPROTKB|P62269 - symbol:RPS18 "40S ribosomal protein S1... 539 5.6e-52 1
UNIPROTKB|P62272 - symbol:RPS18 "40S ribosomal protein S1... 539 5.6e-52 1
UNIPROTKB|A7KIL2 - symbol:RPS18 "Ribosomal protein S18" s... 539 5.6e-52 1
MGI|MGI:98146 - symbol:Rps18 "ribosomal protein S18" spec... 539 5.6e-52 1
RGD|3595 - symbol:Rps18 "ribosomal protein S18" species:1... 539 5.6e-52 1
RGD|2318487 - symbol:LOC100362298 "ribosomal protein S18-... 531 4.0e-51 1
ASPGD|ASPL0000026438 - symbol:AN5441 species:162425 "Emer... 527 1.1e-50 1
UNIPROTKB|Q5B1Y9 - symbol:AN5441.2 "Ribosomal protein S13... 527 1.1e-50 1
UNIPROTKB|Q7RXX0 - symbol:NCU00475 "40S ribosomal protein... 518 9.5e-50 1
FB|FBgn0010411 - symbol:RpS18 "Ribosomal protein S18" spe... 517 1.2e-49 1
UNIPROTKB|G4MNZ8 - symbol:MGG_05661 "40S ribosomal protei... 517 1.2e-49 1
POMBASE|SPBC16D10.11c - symbol:rps1801 "40S ribosomal pro... 509 8.5e-49 1
POMBASE|SPCC1259.01c - symbol:rps1802 "40S ribosomal prot... 509 8.5e-49 1
RGD|1562404 - symbol:RGD1562404 "similar to ribosomal pro... 506 1.8e-48 1
WB|WBGene00004487 - symbol:rps-18 species:6239 "Caenorhab... 506 1.8e-48 1
UNIPROTKB|O18240 - symbol:rps-18 "Protein RPS-18" species... 506 1.8e-48 1
RGD|1561919 - symbol:RGD1561919 "similar to ribosomal pro... 505 2.3e-48 1
UNIPROTKB|F1S4M2 - symbol:RPS18 "40S ribosomal protein S1... 500 7.7e-48 1
GENEDB_PFALCIPARUM|PF11_0272 - symbol:PF11_0272 "ribosoma... 495 2.6e-47 1
UNIPROTKB|Q7R7S0 - symbol:PY07508 "Ribosomal protein S13/... 485 3.0e-46 1
UNIPROTKB|Q756F0 - symbol:AER315C "AER315Cp" species:2848... 484 3.8e-46 1
DICTYBASE|DDB_G0276415 - symbol:rps18 "40S ribosomal prot... 480 1.0e-45 1
SGD|S000002858 - symbol:RPS18A "Protein component of the ... 476 2.7e-45 1
SGD|S000004488 - symbol:RPS18B "Protein component of the ... 476 2.7e-45 1
MGI|MGI:3645266 - symbol:Gm5321 "predicted gene 5321" spe... 463 6.4e-44 1
RGD|1565912 - symbol:RGD1565912 "similar to ribosomal pro... 363 2.5e-33 1
UNIPROTKB|F1M6D1 - symbol:F1M6D1 "Uncharacterized protein... 314 3.9e-28 1
UNIPROTKB|F1M2A2 - symbol:F1M2A2 "Uncharacterized protein... 312 6.4e-28 1
UNIPROTKB|J3JS69 - symbol:RPS18 "HCG1777176, isoform CRA_... 307 2.2e-27 1
UNIPROTKB|Q8TRR2 - symbol:rps13 "30S ribosomal protein S1... 266 4.8e-23 1
UNIPROTKB|P95986 - symbol:rps13 "30S ribosomal protein S1... 263 1.0e-22 1
UNIPROTKB|Q9GT46 - symbol:IrpS18 "Ribosomal protein S18" ... 146 2.5e-10 1
TIGR_CMR|ECH_0430 - symbol:ECH_0430 "ribosomal protein S1... 94 4.2e-10 2
TIGR_CMR|SO_0253 - symbol:SO_0253 "ribosomal protein S13"... 89 7.3e-09 2
UNIPROTKB|Q9X1I5 - symbol:rpsM "30S ribosomal protein S13... 87 2.0e-08 2
UNIPROTKB|Q5GGW2 - symbol:RPS18 "Rhabdomyosarcoma antigen... 128 2.0e-08 1
TIGR_CMR|APH_0301 - symbol:APH_0301 "ribosomal protein S1... 88 8.5e-08 2
UNIPROTKB|Q8HCP0 - symbol:rps13 "Ribosomal protein S13" s... 79 1.1e-07 2
TIGR_CMR|CHY_2284 - symbol:CHY_2284 "ribosomal protein S1... 83 3.1e-07 2
UNIPROTKB|A6UZL0 - symbol:rpsM "30S ribosomal protein S13... 79 1.1e-06 2
UNIPROTKB|Q3KLI8 - symbol:rpsM "30S ribosomal protein S13... 77 1.1e-06 2
UNIPROTKB|P20282 - symbol:rpsM "30S ribosomal protein S13... 78 1.4e-06 2
ASPGD|ASPL0000076821 - symbol:AN4468 species:162425 "Emer... 83 3.1e-06 2
UNIPROTKB|P0A7S9 - symbol:rpsM species:83333 "Escherichia... 74 5.9e-06 2
TIGR_CMR|NSE_0287 - symbol:NSE_0287 "ribosomal protein S1... 82 6.8e-06 2
UNIPROTKB|O86773 - symbol:rpsM "30S ribosomal protein S13... 74 2.0e-05 2
UNIPROTKB|Q9XD12 - symbol:rpsM "30S ribosomal protein S13... 75 2.6e-05 2
TIGR_CMR|BA_0135 - symbol:BA_0135 "ribosomal protein S13"... 70 3.6e-05 2
TIGR_CMR|CPS_0623 - symbol:CPS_0623 "ribosomal protein S1... 77 4.7e-05 2
UNIPROTKB|Q89JA6 - symbol:rpsM "30S ribosomal protein S13... 94 8.1e-05 1
TIGR_CMR|SPO_0509 - symbol:SPO_0509 "ribosomal protein S1... 94 8.1e-05 1
UNIPROTKB|Q5B4R2 - symbol:AN4468.2 "Putative uncharacteri... 83 0.00015 2
TIGR_CMR|CBU_0260 - symbol:CBU_0260 "ribosomal protein S1... 91 0.00017 1
TIGR_CMR|CJE_1764 - symbol:CJE_1764 "ribosomal protein S1... 67 0.00018 2
UNIPROTKB|Q9KP05 - symbol:rpsM "30S ribosomal protein S13... 68 0.00024 2
TIGR_CMR|VC_2574 - symbol:VC_2574 "ribosomal protein S13"... 68 0.00024 2
POMBASE|SPCC1795.07 - symbol:SPCC1795.07 "mitochondrial r... 68 0.00029 2
UNIPROTKB|O66486 - symbol:rpsM "30S ribosomal protein S13... 89 0.00074 1
UNIPROTKB|Q2F922 - symbol:rps13 "Ribosomal protein S13" s... 67 0.00082 2
UNIPROTKB|Q2F974 - symbol:rps13 "Ribosomal protein S13" s... 67 0.00082 2
>TAIR|locus:2199670 [details] [associations]
symbol:PFL "POINTED FIRST LEAVES" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0006413 "translational initiation" evidence=TAS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005618 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005730 GO:GO:0006413 GO:GO:0042254 GO:GO:0003735
GO:GO:0019843 EMBL:AL161515 EMBL:AL049482 GO:GO:0022627
SUPFAM:SSF46946 EMBL:AC003979 EMBL:Y12227 EMBL:AC015446
EMBL:AC079286 eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877
KO:K02964 EMBL:Z23165 EMBL:Z28701 EMBL:Z28702 EMBL:Z28962
EMBL:AF411781 EMBL:AF386941 EMBL:AF370463 EMBL:AY034965
EMBL:AY064680 EMBL:AY070029 EMBL:AY086334 EMBL:AY086800
EMBL:BT006539 EMBL:AY087428 IPI:IPI00532609 PIR:S46223
RefSeq:NP_173692.1 RefSeq:NP_192718.1 RefSeq:NP_564434.1
UniGene:At.179 UniGene:At.180 UniGene:At.20392 UniGene:At.33672
ProteinModelPortal:P34788 SMR:P34788 IntAct:P34788 STRING:P34788
PaxDb:P34788 PRIDE:P34788 EnsemblPlants:AT1G22780.1
EnsemblPlants:AT1G34030.1 EnsemblPlants:AT4G09800.1 GeneID:826569
GeneID:838884 GeneID:840300 KEGG:ath:AT1G22780 KEGG:ath:AT1G34030
KEGG:ath:AT4G09800 GeneFarm:799 GeneFarm:800 GeneFarm:802
TAIR:At1g22780 TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788
OMA:IKYIVRI PhylomeDB:P34788 ProtClustDB:CLSN2681852
Genevestigator:P34788 GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 133/152 (87%), Positives = 137/152 (90%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS
Sbjct: 1 MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
AAE+D LM +VANPRQFKIPDWFLNRQKDYKDG+YSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61 AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRHYWGLRVRGQH SKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152
>TAIR|locus:2009066 [details] [associations]
symbol:AT1G34030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005774
GO:GO:0005618 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0006413 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AL161515 EMBL:AL049482 GO:GO:0022627 SUPFAM:SSF46946
EMBL:AC003979 EMBL:Y12227 EMBL:AC015446 EMBL:AC079286
eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
EMBL:Z23165 EMBL:Z28701 EMBL:Z28702 EMBL:Z28962 EMBL:AF411781
EMBL:AF386941 EMBL:AF370463 EMBL:AY034965 EMBL:AY064680
EMBL:AY070029 EMBL:AY086334 EMBL:AY086800 EMBL:BT006539
EMBL:AY087428 IPI:IPI00532609 PIR:S46223 RefSeq:NP_173692.1
RefSeq:NP_192718.1 RefSeq:NP_564434.1 UniGene:At.179 UniGene:At.180
UniGene:At.20392 UniGene:At.33672 ProteinModelPortal:P34788
SMR:P34788 IntAct:P34788 STRING:P34788 PaxDb:P34788 PRIDE:P34788
EnsemblPlants:AT1G22780.1 EnsemblPlants:AT1G34030.1
EnsemblPlants:AT4G09800.1 GeneID:826569 GeneID:838884 GeneID:840300
KEGG:ath:AT1G22780 KEGG:ath:AT1G34030 KEGG:ath:AT4G09800
GeneFarm:799 GeneFarm:800 GeneFarm:802 TAIR:At1g22780
TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788 OMA:IKYIVRI
PhylomeDB:P34788 ProtClustDB:CLSN2681852 Genevestigator:P34788
GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 133/152 (87%), Positives = 137/152 (90%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS
Sbjct: 1 MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
AAE+D LM +VANPRQFKIPDWFLNRQKDYKDG+YSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61 AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRHYWGLRVRGQH SKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152
>TAIR|locus:2005541 [details] [associations]
symbol:RPS18C "S18 ribosomal protein" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0015935 "small ribosomal subunit"
evidence=ISS;TAS] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0009506 GO:GO:0005774 GO:GO:0005618
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0006413
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 EMBL:AL161515
EMBL:AL049482 GO:GO:0022627 SUPFAM:SSF46946 EMBL:AC003979
EMBL:Y12227 EMBL:AC015446 EMBL:AC079286 eggNOG:COG0099
PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964 EMBL:Z23165
EMBL:Z28701 EMBL:Z28702 EMBL:Z28962 EMBL:AF411781 EMBL:AF386941
EMBL:AF370463 EMBL:AY034965 EMBL:AY064680 EMBL:AY070029
EMBL:AY086334 EMBL:AY086800 EMBL:BT006539 EMBL:AY087428
IPI:IPI00532609 PIR:S46223 RefSeq:NP_173692.1 RefSeq:NP_192718.1
RefSeq:NP_564434.1 UniGene:At.179 UniGene:At.180 UniGene:At.20392
UniGene:At.33672 ProteinModelPortal:P34788 SMR:P34788 IntAct:P34788
STRING:P34788 PaxDb:P34788 PRIDE:P34788 EnsemblPlants:AT1G22780.1
EnsemblPlants:AT1G34030.1 EnsemblPlants:AT4G09800.1 GeneID:826569
GeneID:838884 GeneID:840300 KEGG:ath:AT1G22780 KEGG:ath:AT1G34030
KEGG:ath:AT4G09800 GeneFarm:799 GeneFarm:800 GeneFarm:802
TAIR:At1g22780 TAIR:At1g34030 TAIR:At4g09800 InParanoid:P34788
OMA:IKYIVRI PhylomeDB:P34788 ProtClustDB:CLSN2681852
Genevestigator:P34788 GermOnline:AT1G22780 Uniprot:P34788
Length = 152
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 133/152 (87%), Positives = 137/152 (90%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS
Sbjct: 1 MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
AAE+D LM +VANPRQFKIPDWFLNRQKDYKDG+YSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61 AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRHYWGLRVRGQH SKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152
>UNIPROTKB|Q8H590 [details] [associations]
symbol:OJ1656_E11.104 "Putative ribosomal protein S18A"
species:39947 "Oryza sativa Japonica Group" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
EMBL:DP000009 EMBL:AP008209 GO:GO:0003723 GO:GO:0003735
EMBL:AP008213 EMBL:CM000144 GO:GO:0022627 SUPFAM:SSF46946
GO:GO:0015935 PANTHER:PTHR10871 KO:K02964 OMA:IKYIVRI
ProtClustDB:CLSN2681852 EMBL:AP003843 EMBL:AP004670 EMBL:AC090871
EMBL:AC092076 EMBL:AK058881 EMBL:AK059548 RefSeq:NP_001051541.1
RefSeq:NP_001059007.2 UniGene:Os.13842 UniGene:Os.88187
STRING:Q8H590 EnsemblPlants:LOC_Os03g58050.1
EnsemblPlants:LOC_Os07g07709.1 GeneID:4334407 GeneID:4342526
KEGG:osa:4334407 KEGG:osa:4342526 Uniprot:Q8H590
Length = 152
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 122/152 (80%), Positives = 133/152 (87%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSL+A EDFQHILR+LNTNVDGKQKIMFALTSIKG+GRR +NI CKKAD+DMNKRAGEL+
Sbjct: 1 MSLIAGEDFQHILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
EL++LM VVANPRQFK+PDWFLNR+KDYKDGR+SQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61 PEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRHYWGLRVRGQH SKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152
>UNIPROTKB|Q8H588 [details] [associations]
symbol:OJ1656_E11.108 "Putative ribosomal protein S18"
species:39947 "Oryza sativa Japonica Group" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 EMBL:CM000144 GO:GO:0022627
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 EMBL:AP003843
EMBL:AP004670 STRING:Q8H588 Uniprot:Q8H588
Length = 148
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 119/146 (81%), Positives = 128/146 (87%)
Query: 7 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQ 66
EDFQHILR+LNTNVDGKQKIMFALTSIKGIGRR +NI CKKAD+DMNKRAGEL+ EL++
Sbjct: 3 EDFQHILRLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELER 62
Query: 67 LMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHY 126
LM VVANPRQFK+PDWFLNR+KDYKDGR+SQVVSNALDMKLRDDLERLKKIRNHRGLRHY
Sbjct: 63 LMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHY 122
Query: 127 WGLRVRGQHXXXXXXXXXXXXXSKKR 152
WGLRVRGQH SKKR
Sbjct: 123 WGLRVRGQHTKTTGRRGKTVGVSKKR 148
>UNIPROTKB|A8HVP2 [details] [associations]
symbol:RPS18 "Ribosomal protein S18" species:3055
"Chlamydomonas reinhardtii" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0005886 GO:GO:0005618
GO:GO:0005773 GO:GO:0005730 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 GO:GO:0022626 EMBL:DS496110
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 KO:K02964
ProtClustDB:CLSN2681852 RefSeq:XP_001696472.1 UniGene:Cre.8169
ProteinModelPortal:A8HVP2 SMR:A8HVP2 STRING:A8HVP2 PRIDE:A8HVP2
EnsemblPlants:EDP08449 GeneID:5721802 KEGG:cre:CHLREDRAFT_155649
Uniprot:A8HVP2
Length = 153
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 102/151 (67%), Positives = 124/151 (82%)
Query: 2 SLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSA 61
SLV +DFQHILR+LNTNVDGK KIM+A+T+I+GIGRR +N+VCKKA+VD+ KRAGE SA
Sbjct: 3 SLVQGDDFQHILRLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKRAGECSA 62
Query: 62 AELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHR 121
EL+++M +VANPR +KIPDWFLNRQKD+K GR+SQ+ S+ LD +RDDLERLKKIRNHR
Sbjct: 63 DELERMMGIVANPRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRNHR 122
Query: 122 GLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
GLRHYWGLRVRGQH +KK+
Sbjct: 123 GLRHYWGLRVRGQHTKTTGRAGKTVGVAKKK 153
>ZFIN|ZDB-GENE-020419-20 [details] [associations]
symbol:rps18 "ribosomal protein S18" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IBA] [GO:0006412
"translation" evidence=IEA;IBA] [GO:0015935 "small ribosomal
subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IMP]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
ZFIN:ZDB-GENE-020419-20 GO:GO:0007275 GO:GO:0005829 GO:GO:0006412
GO:GO:0042254 GO:GO:0051726 GO:GO:0003735 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:AY099517 EMBL:BC062289 EMBL:AF210641
IPI:IPI00490073 RefSeq:NP_775341.1 UniGene:Dr.76001
ProteinModelPortal:Q8JGS9 SMR:Q8JGS9 STRING:Q8JGS9 PRIDE:Q8JGS9
Ensembl:ENSDART00000017975 GeneID:192300 KEGG:dre:192300
InParanoid:Q8JGS9 NextBio:20797141 ArrayExpress:Q8JGS9 Bgee:Q8JGS9
Uniprot:Q8JGS9
Length = 152
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 99/152 (65%), Positives = 125/152 (82%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+NKRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UNIPROTKB|Q90YQ5 [details] [associations]
symbol:rps18 "40S ribosomal protein S18" species:7998
"Ictalurus punctatus" [GO:0015935 "small ribosomal subunit"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022627 SUPFAM:SSF46946 HAMAP:MF_01315 PANTHER:PTHR10871
HOVERGEN:HBG000200 EMBL:AF402827 RefSeq:NP_001187081.1
UniGene:Ipu.133 ProteinModelPortal:Q90YQ5 SMR:Q90YQ5 PRIDE:Q90YQ5
GeneID:100304570 Uniprot:Q90YQ5
Length = 152
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 98/152 (64%), Positives = 125/152 (82%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D++KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UNIPROTKB|Q3T0R1 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=ISS;IBA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 GO:GO:0022627
SUPFAM:SSF46946 eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 EMBL:BC102293 IPI:IPI00689850
RefSeq:NP_001028786.1 UniGene:Bt.15275 ProteinModelPortal:Q3T0R1
SMR:Q3T0R1 STRING:Q3T0R1 PRIDE:Q3T0R1 Ensembl:ENSBTAT00000003431
GeneID:326602 KEGG:bta:326602 CTD:6222 HOVERGEN:HBG000200
InParanoid:Q3T0R1 OrthoDB:EOG4KSPM2 NextBio:20809664
ArrayExpress:Q3T0R1 Uniprot:Q3T0R1
Length = 152
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 98/152 (64%), Positives = 124/152 (81%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UNIPROTKB|Q5TJE9 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9615
"Canis lupus familiaris" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0015935 "small ribosomal subunit"
evidence=ISS;IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AJ630366 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 PDB:2ZKQ PDBsum:2ZKQ OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 GeneTree:ENSGT00390000012691
CTD:6222 HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 RefSeq:NP_001041547.1
UniGene:Cfa.6430 ProteinModelPortal:Q5TJE9 SMR:Q5TJE9 STRING:Q5TJE9
PRIDE:Q5TJE9 Ensembl:ENSCAFT00000001473 GeneID:403685
KEGG:cfa:403685 InParanoid:Q5TJE9 EvolutionaryTrace:Q5TJE9
NextBio:20817189 Uniprot:Q5TJE9
Length = 152
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 98/152 (64%), Positives = 124/152 (81%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UNIPROTKB|P62269 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA;TAS] [GO:0006412 "translation"
evidence=IC;IBA;TAS] [GO:0015935 "small ribosomal subunit"
evidence=IDA;IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005840
"ribosome" evidence=NAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
Reactome:REACT_116125 EMBL:CH471081 GO:GO:0000184 GO:GO:0006413
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 EMBL:AL031228
EMBL:AL645940 EMBL:AL844527 EMBL:AL662827 EMBL:AL662820
EMBL:CR759817 EMBL:CR759786 GO:GO:0006415 EMBL:AL713971
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 SUPFAM:SSF46946
GO:GO:0006614 GO:GO:0019083 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
CTD:6222 HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 EMBL:X69150
EMBL:BC101786 EMBL:BC101788 EMBL:BC106063 IPI:IPI00013296
PIR:S30393 RefSeq:NP_072045.1 UniGene:Hs.448854 UniGene:Hs.627414
ProteinModelPortal:P62269 SMR:P62269 IntAct:P62269
MINT:MINT-1151113 STRING:P62269 PhosphoSite:P62269 DMDM:50403625
PaxDb:P62269 PeptideAtlas:P62269 PRIDE:P62269
Ensembl:ENST00000211372 Ensembl:ENST00000434122
Ensembl:ENST00000439602 Ensembl:ENST00000454021
Ensembl:ENST00000457341 GeneID:6222 KEGG:hsa:6222 UCSC:uc003odp.1
GeneCards:GC06P033240 HGNC:HGNC:10401 HPA:HPA050159 MIM:180473
neXtProt:NX_P62269 PharmGKB:PA34801 InParanoid:P62269
PhylomeDB:P62269 GenomeRNAi:6222 NextBio:24155 ArrayExpress:P62269
Bgee:P62269 CleanEx:HS_RPS18 Genevestigator:P62269
GermOnline:ENSG00000182498 Uniprot:P62269
Length = 152
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 98/152 (64%), Positives = 124/152 (81%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UNIPROTKB|P62272 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:AB000911 RefSeq:NP_999105.1
UniGene:Ssc.53782 ProteinModelPortal:P62272 SMR:P62272
STRING:P62272 PRIDE:P62272 Ensembl:ENSSSCT00000001675 GeneID:396980
KEGG:ssc:396980 Uniprot:P62272
Length = 152
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 98/152 (64%), Positives = 124/152 (81%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UNIPROTKB|A7KIL2 [details] [associations]
symbol:RPS18 "Ribosomal protein S18" species:8030 "Salmo
salar" [GO:0015935 "small ribosomal subunit" evidence=ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0022627
SUPFAM:SSF46946 PANTHER:PTHR10871 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:EF427383 EMBL:BT043500 EMBL:BT047156
EMBL:BT047683 EMBL:BT049532 EMBL:BT050180 EMBL:BT058115
EMBL:BT058207 EMBL:BT059815 EMBL:BT059907 EMBL:GQ505858
EMBL:GQ505859 ProteinModelPortal:A7KIL2 SMR:A7KIL2 Uniprot:A7KIL2
Length = 152
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 98/152 (64%), Positives = 125/152 (82%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D++KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 DDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>MGI|MGI:98146 [details] [associations]
symbol:Rps18 "ribosomal protein S18" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=ISO;IBA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IBA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 MGI:MGI:98146
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735
GO:GO:0019843 EMBL:AF110520 EMBL:AF100956 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964 CTD:6222
HOVERGEN:HBG000200 OrthoDB:EOG4KSPM2 EMBL:M76763 EMBL:M76762
EMBL:AK050626 EMBL:BC081459 EMBL:BC081458 IPI:IPI00317590
PIR:I76666 RefSeq:NP_035426.1 UniGene:Mm.298745 UniGene:Mm.324762
UniGene:Mm.440079 ProteinModelPortal:P62270 SMR:P62270
IntAct:P62270 STRING:P62270 PhosphoSite:P62270 PaxDb:P62270
PRIDE:P62270 Ensembl:ENSMUST00000008812 GeneID:20084 KEGG:mmu:20084
InParanoid:P62270 NextBio:297575 Bgee:P62270 CleanEx:MM_RPS18
Genevestigator:P62270 GermOnline:ENSMUSG00000008668 Uniprot:P62270
Length = 152
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 98/152 (64%), Positives = 124/152 (81%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>RGD|3595 [details] [associations]
symbol:Rps18 "ribosomal protein S18" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IBA;TAS] [GO:0006412 "translation" evidence=IBA] [GO:0006417
"regulation of translation" evidence=NAS] [GO:0015935 "small
ribosomal subunit" evidence=ISO;TAS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 RGD:3595
GO:GO:0006417 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:BX883042 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 GeneTree:ENSGT00390000012691 CTD:6222 HOVERGEN:HBG000200
OrthoDB:EOG4KSPM2 EMBL:X57529 EMBL:BC126072 IPI:IPI00188058
PIR:JH0419 RefSeq:NP_998722.1 RefSeq:XP_002724624.1
RefSeq:XP_002727879.1 UniGene:Rn.199092 UniGene:Rn.42766
ProteinModelPortal:P62271 SMR:P62271 IntAct:P62271 STRING:P62271
PRIDE:P62271 Ensembl:ENSRNOT00000037499 Ensembl:ENSRNOT00000046010
GeneID:100360679 GeneID:294282 KEGG:rno:100360679 KEGG:rno:294282
UCSC:RGD:3595 InParanoid:P62271 NextBio:637886 Genevestigator:P62271
GermOnline:ENSRNOG00000033152 Uniprot:P62271
Length = 152
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 98/152 (64%), Positives = 124/152 (81%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>RGD|2318487 [details] [associations]
symbol:LOC100362298 "ribosomal protein S18-like" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 RGD:2318487 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OMA:IKYIVRI OrthoDB:EOG4KSPM2
IPI:IPI00387914 RefSeq:XP_002729551.1 Ensembl:ENSRNOT00000048495
GeneID:100362298 KEGG:rno:100362298 UCSC:RGD:2318487 Uniprot:D3ZM33
Length = 152
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 97/152 (63%), Positives = 123/152 (80%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KD +YSQV++N LD KLR+DLERLKKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH SKK+
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGHTVGVSKKK 152
>ASPGD|ASPL0000026438 [details] [associations]
symbol:AN5441 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006407 "rRNA export from
nucleus" evidence=IEA] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 EMBL:BN001305 GO:GO:0003735 EMBL:AACD01000094
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7
RefSeq:XP_663045.1 ProteinModelPortal:Q5B1Y9 SMR:Q5B1Y9
STRING:Q5B1Y9 EnsemblFungi:CADANIAT00003648 GeneID:2871718
KEGG:ani:AN5441.2 Uniprot:Q5B1Y9
Length = 155
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 98/154 (63%), Positives = 123/154 (79%)
Query: 1 MSLVANE--DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGE 58
MSLV+ E +FQ+ILR+LNTNVDGK+KIM+ALT +KG+GRR +N+VCKKADVD+NKRAGE
Sbjct: 1 MSLVSGEKTNFQYILRLLNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGE 60
Query: 59 LSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIR 118
L+ EL++++ ++ NP Q+KIP WFLNRQ+D DG+ QV+SN LD K R+DLERLKKIR
Sbjct: 61 LTTEELERIVTILQNPTQYKIPTWFLNRQRDIVDGKDYQVLSNGLDSKYREDLERLKKIR 120
Query: 119 NHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
+HRGLRHYWGLRVRGQH SKK+
Sbjct: 121 SHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 154
>UNIPROTKB|Q5B1Y9 [details] [associations]
symbol:AN5441.2 "Ribosomal protein S13p/S18e
(AFU_orthologue; AFUA_6G13550)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
EMBL:BN001305 GO:GO:0003735 EMBL:AACD01000094 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7 RefSeq:XP_663045.1
ProteinModelPortal:Q5B1Y9 SMR:Q5B1Y9 STRING:Q5B1Y9
EnsemblFungi:CADANIAT00003648 GeneID:2871718 KEGG:ani:AN5441.2
Uniprot:Q5B1Y9
Length = 155
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 98/154 (63%), Positives = 123/154 (79%)
Query: 1 MSLVANE--DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGE 58
MSLV+ E +FQ+ILR+LNTNVDGK+KIM+ALT +KG+GRR +N+VCKKADVD+NKRAGE
Sbjct: 1 MSLVSGEKTNFQYILRLLNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGE 60
Query: 59 LSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIR 118
L+ EL++++ ++ NP Q+KIP WFLNRQ+D DG+ QV+SN LD K R+DLERLKKIR
Sbjct: 61 LTTEELERIVTILQNPTQYKIPTWFLNRQRDIVDGKDYQVLSNGLDSKYREDLERLKKIR 120
Query: 119 NHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
+HRGLRHYWGLRVRGQH SKK+
Sbjct: 121 SHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 154
>UNIPROTKB|Q7RXX0 [details] [associations]
symbol:NCU00475 "40S ribosomal protein S18" species:367110
"Neurospora crassa OR74A" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935
eggNOG:COG0099 PANTHER:PTHR10871 HOGENOM:HOG000039877 KO:K02964
OrthoDB:EOG437VQ7 EMBL:AABX02000001 RefSeq:XP_956794.2
UniGene:Ncr.4507 ProteinModelPortal:Q7RXX0 SMR:Q7RXX0 STRING:Q7RXX0
EnsemblFungi:EFNCRT00000000145 GeneID:3872941 KEGG:ncr:NCU00475
Uniprot:Q7RXX0
Length = 156
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 95/154 (61%), Positives = 123/154 (79%)
Query: 1 MSLVANE--DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGE 58
MSLV+ E +F HILR+LNTNVDGKQK++++LT IKG+GRR +N+VCKKADVD++KRAGE
Sbjct: 1 MSLVSGEKSNFNHILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLSKRAGE 60
Query: 59 LSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIR 118
L++ EL++++ ++ NP +KIP WFLNRQ+D DG+ SQ+++N +D KLRDDLERLKKIR
Sbjct: 61 LTSEELERIVTIMQNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIR 120
Query: 119 NHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
HRGLRHYWGLRVRGQH SKK+
Sbjct: 121 AHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 154
>FB|FBgn0010411 [details] [associations]
symbol:RpS18 "Ribosomal protein S18" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IBA;NAS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;NAS] [GO:0006412 "translation"
evidence=ISS;IBA;NAS] [GO:0006413 "translational initiation"
evidence=NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:AE013599 GO:GO:0005829 GO:GO:0005811 GO:GO:0006412
GO:GO:0042254 GO:GO:0003735 GO:GO:0019843 GO:GO:0000022
ChiTaRS:RPS18 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI KO:K02964
GeneTree:ENSGT00390000012691 CTD:6222 EMBL:L22959 EMBL:AY118434
EMBL:BT024929 RefSeq:NP_476964.1 RefSeq:NP_725943.1
UniGene:Dm.20558 ProteinModelPortal:P41094 SMR:P41094
DIP:DIP-21027N STRING:P41094 PaxDb:P41094 PRIDE:P41094
EnsemblMetazoa:FBtr0086273 EnsemblMetazoa:FBtr0086274 GeneID:37292
KEGG:dme:Dmel_CG8900 FlyBase:FBgn0010411 InParanoid:P41094
OrthoDB:EOG49GJ00 PhylomeDB:P41094 GenomeRNAi:37292 NextBio:802956
Bgee:P41094 GermOnline:CG8900 Uniprot:P41094
Length = 152
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 94/152 (61%), Positives = 120/152 (78%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILR++NTN+DGK+K+ A+T+IKG+GRR +NIV KKADVD+ KRAGE +
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+D+++ +++NP Q+K+P+WFLNRQKD DG+Y Q+ S+ LD KLRDDLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRHYWGLRVRGQH SKK+
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152
>UNIPROTKB|G4MNZ8 [details] [associations]
symbol:MGG_05661 "40S ribosomal protein S18" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 SUPFAM:SSF46946
PANTHER:PTHR10871 KO:K02964 RefSeq:XP_003710559.1
ProteinModelPortal:G4MNZ8 SMR:G4MNZ8 EnsemblFungi:MGG_05661T0
GeneID:2676017 KEGG:mgr:MGG_05661 Uniprot:G4MNZ8
Length = 156
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 98/154 (63%), Positives = 122/154 (79%)
Query: 1 MSLVANE--DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGE 58
MSLV+ E +FQ ILR+LNTNVDGKQKI++ALT IKG+GRR +N+V KKADVD+NKRAGE
Sbjct: 1 MSLVSGEKSNFQFILRLLNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDLNKRAGE 60
Query: 59 LSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIR 118
L++ EL++++ ++ NP Q+KIP WFLNRQ+D DG+ SQ ++N +D KLRDDLERLKKIR
Sbjct: 61 LTSEELERVVTILQNPTQYKIPSWFLNRQRDIVDGKDSQTLANGVDSKLRDDLERLKKIR 120
Query: 119 NHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
HRGLRHYWGLRVRGQH SKK+
Sbjct: 121 AHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 154
>POMBASE|SPBC16D10.11c [details] [associations]
symbol:rps1801 "40S ribosomal protein S18 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=ISO] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
PomBase:SPBC16D10.11c PomBase:SPCC1259.01c GO:GO:0005739
GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 SUPFAM:SSF46946 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 PIR:T39575 RefSeq:NP_588057.2 RefSeq:NP_596506.1
ProteinModelPortal:O94754 SMR:O94754 IntAct:O94754 STRING:O94754
PRIDE:O94754 EnsemblFungi:SPBC16D10.11c.1
EnsemblFungi:SPCC1259.01c.1 GeneID:2540180 GeneID:3361064
KEGG:spo:SPBC16D10.11c KEGG:spo:SPCC1259.01c OrthoDB:EOG437VQ7
NextBio:20801312 Uniprot:O94754
Length = 152
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 95/152 (62%), Positives = 118/152 (77%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV ++FQHILR+LNTNVDGK K+MFA+T IKG+GRR ANIVCKKAD+DM+KRAGEL+
Sbjct: 1 MSLVVPDNFQHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
EL++++ ++ NP QFKIP WFLNRQKD DG+ Q+++N +D KLR+DLERLKKI+ H
Sbjct: 61 TEELERIVTIIQNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH LRVRGQH SKK+
Sbjct: 121 RGLRHALDLRVRGQHTKTTGRRGKTVGVSKKK 152
>POMBASE|SPCC1259.01c [details] [associations]
symbol:rps1802 "40S ribosomal protein S18 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=ISM] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 PomBase:SPBC16D10.11c PomBase:SPCC1259.01c
GO:GO:0005739 GO:GO:0005730 EMBL:CU329672 GenomeReviews:CU329672_GR
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0022627 SUPFAM:SSF46946
eggNOG:COG0099 HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 PIR:T39575 RefSeq:NP_588057.2
RefSeq:NP_596506.1 ProteinModelPortal:O94754 SMR:O94754
IntAct:O94754 STRING:O94754 PRIDE:O94754
EnsemblFungi:SPBC16D10.11c.1 EnsemblFungi:SPCC1259.01c.1
GeneID:2540180 GeneID:3361064 KEGG:spo:SPBC16D10.11c
KEGG:spo:SPCC1259.01c OrthoDB:EOG437VQ7 NextBio:20801312
Uniprot:O94754
Length = 152
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 95/152 (62%), Positives = 118/152 (77%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV ++FQHILR+LNTNVDGK K+MFA+T IKG+GRR ANIVCKKAD+DM+KRAGEL+
Sbjct: 1 MSLVVPDNFQHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
EL++++ ++ NP QFKIP WFLNRQKD DG+ Q+++N +D KLR+DLERLKKI+ H
Sbjct: 61 TEELERIVTIIQNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH LRVRGQH SKK+
Sbjct: 121 RGLRHALDLRVRGQHTKTTGRRGKTVGVSKKK 152
>RGD|1562404 [details] [associations]
symbol:RGD1562404 "similar to ribosomal protein S18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 RGD:1562404 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OrthoDB:EOG4KSPM2 IPI:IPI00214217
RefSeq:XP_001058023.1 RefSeq:XP_234780.1 PRIDE:D3ZII2
Ensembl:ENSRNOT00000051652 GeneID:314556 KEGG:rno:314556
UCSC:RGD:1562404 CTD:314556 OMA:HFWDLRV NextBio:667837
Uniprot:D3ZII2
Length = 152
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 93/152 (61%), Positives = 119/152 (78%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG+ KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFL+RQKD KDG+YSQV++ LD KL +DLERLKKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLDRQKDVKDGKYSQVLAKGLDNKLHEDLERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+W LRV GQH SKK+
Sbjct: 121 RGLRHFWDLRVGGQHSKTTGRRGHTVGVSKKK 152
>WB|WBGene00004487 [details] [associations]
symbol:rps-18 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006898 GO:GO:0006412
EMBL:Z99281 GO:GO:0000003 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871
OMA:FQHILRI HOGENOM:HOG000039877 KO:K02964
GeneTree:ENSGT00390000012691 PIR:T27228 RefSeq:NP_502794.1
ProteinModelPortal:O18240 SMR:O18240 DIP:DIP-25985N
MINT:MINT-1089736 STRING:O18240 PaxDb:O18240
EnsemblMetazoa:Y57G11C.16.1 EnsemblMetazoa:Y57G11C.16.2
GeneID:178408 KEGG:cel:CELE_Y57G11C.16 UCSC:Y57G11C.16.1 CTD:178408
WormBase:Y57G11C.16 InParanoid:O18240 NextBio:901012 Uniprot:O18240
Length = 154
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 91/152 (59%), Positives = 118/152 (77%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSL+ E FQHI RV+NTN+DG +K+ +ALT+IKG+GRR A + C+KADVD+NKRAGEL+
Sbjct: 1 MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
+ D+++ ++ NP Q+KIP+WFLNRQKD KDG+ Q++S A+D KLR+DLER+KKIR H
Sbjct: 61 EEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRHYWGLRVRGQH SKK+
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRKGRTVGVSKKK 152
>UNIPROTKB|O18240 [details] [associations]
symbol:rps-18 "Protein RPS-18" species:6239 "Caenorhabditis
elegans" [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0003735 "structural constituent of ribosome" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006898 GO:GO:0006412 EMBL:Z99281 GO:GO:0000003
GO:GO:0042254 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 GeneTree:ENSGT00390000012691
PIR:T27228 RefSeq:NP_502794.1 ProteinModelPortal:O18240 SMR:O18240
DIP:DIP-25985N MINT:MINT-1089736 STRING:O18240 PaxDb:O18240
EnsemblMetazoa:Y57G11C.16.1 EnsemblMetazoa:Y57G11C.16.2
GeneID:178408 KEGG:cel:CELE_Y57G11C.16 UCSC:Y57G11C.16.1 CTD:178408
WormBase:Y57G11C.16 InParanoid:O18240 NextBio:901012 Uniprot:O18240
Length = 154
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 91/152 (59%), Positives = 118/152 (77%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSL+ E FQHI RV+NTN+DG +K+ +ALT+IKG+GRR A + C+KADVD+NKRAGEL+
Sbjct: 1 MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
+ D+++ ++ NP Q+KIP+WFLNRQKD KDG+ Q++S A+D KLR+DLER+KKIR H
Sbjct: 61 EEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRHYWGLRVRGQH SKK+
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRKGRTVGVSKKK 152
>RGD|1561919 [details] [associations]
symbol:RGD1561919 "similar to ribosomal protein S18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 RGD:1561919 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 OrthoDB:EOG4KSPM2 IPI:IPI00197271
RefSeq:XP_226269.1 Ensembl:ENSRNOT00000047417 GeneID:307665
KEGG:rno:307665 UCSC:RGD:1561919 CTD:307665 NextBio:657735
Uniprot:D3ZAU6
Length = 152
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 92/152 (60%), Positives = 122/152 (80%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV + FQH LRVL+TNVDG++KI A+T+IKG+G R A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVVPKKFQHSLRVLDTNVDGQRKIALAITAIKGVGWRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+++++ ++ NPRQ+KIPDWFLNRQKD KDG+YSQV++N+LD KLR+DLER+KKIR H
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDMKDGKYSQVLANSLDNKLREDLERVKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRG+H SKK+
Sbjct: 121 RGLRHFWGLRVRGRHTKTTGRRGRTVGVSKKK 152
>UNIPROTKB|F1S4M2 [details] [associations]
symbol:RPS18 "40S ribosomal protein S18" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 EMBL:CU655822
Ensembl:ENSSSCT00000009592 OMA:ATTAIKG Uniprot:F1S4M2
Length = 152
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 93/151 (61%), Positives = 116/151 (76%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
+SLV E FQHILRVLNT +DG QKI FA T+IKG+GRR A++V +KAD+D+ KRAGEL+
Sbjct: 1 LSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E++ ++ ++ NP Q+KIPDWFLNRQKD KDG+YSQV++N LD KL +D+ERLKKIR H
Sbjct: 61 EDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAH 120
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKK 151
RGLRH+WGLRV GQH SKK
Sbjct: 121 RGLRHFWGLRVGGQHTKTTGRRGHTVRVSKK 151
>GENEDB_PFALCIPARUM|PF11_0272 [details] [associations]
symbol:PF11_0272 "ribosomal protein S18,
putative" species:5833 "Plasmodium falciparum" [GO:0015935 "small
ribosomal subunit" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 EMBL:AE014186
SUPFAM:SSF46946 PANTHER:PTHR10871 OMA:FQHILRI HOGENOM:HOG000039877
KO:K02964 ProtClustDB:PTZ00134 RefSeq:XP_001347943.1
ProteinModelPortal:Q8IIA2 SMR:Q8IIA2 IntAct:Q8IIA2
MINT:MINT-1584243 PRIDE:Q8IIA2 EnsemblProtists:PF11_0272:mRNA
GeneID:810819 KEGG:pfa:PF11_0272 EuPathDB:PlasmoDB:PF3D7_1126200
Uniprot:Q8IIA2
Length = 156
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 87/152 (57%), Positives = 118/152 (77%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
+ ++ N DFQHILR+LNTNVDGK+K++ ALT+IKGIG+R+A ++CK+A+VD KRAGEL+
Sbjct: 3 LQVIDNNDFQHILRILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELT 62
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E+D ++ +++ P QFKIPDWFLNR+KD K+G+ V++N LD LR+DLER+KKIR H
Sbjct: 63 TEEIDNIVHIMSTPTQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIRLH 122
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH +KK+
Sbjct: 123 RGLRHHWGLRVRGQHTKTTGRRGRTVGVAKKK 154
>UNIPROTKB|Q7R7S0 [details] [associations]
symbol:PY07508 "Ribosomal protein S13/S18" species:73239
"Plasmodium yoelii yoelii" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005829 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935
eggNOG:COG0099 PANTHER:PTHR10871 KO:K02964 EMBL:AABL01002777
RefSeq:XP_728420.1 ProteinModelPortal:Q7R7S0 SMR:Q7R7S0
STRING:Q7R7S0 GeneID:3800630 KEGG:pyo:PY07508
EuPathDB:PlasmoDB:PY07508 Uniprot:Q7R7S0
Length = 156
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 85/152 (55%), Positives = 117/152 (76%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
+ ++ DF HILR+LNTNVDGK+K+ ALT+IKGIG+R+AN++CK+A+VD KRAGEL+
Sbjct: 3 LQVIDQNDFHHILRILNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELT 62
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
E++ ++ ++++P QFKIPDWFLNR++D KDG+ V++N LD LR+DLER+KKIR H
Sbjct: 63 TEEINNIVHIMSSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLH 122
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGLRVRGQH +KK+
Sbjct: 123 RGLRHHWGLRVRGQHTKTTGRRGRTVGVAKKK 154
>UNIPROTKB|Q756F0 [details] [associations]
symbol:AER315C "AER315Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 EMBL:AE016818 GenomeReviews:AE016818_GR
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871 OMA:FQHILRI
HOGENOM:HOG000039877 KO:K02964 OrthoDB:EOG437VQ7 RefSeq:NP_985171.1
ProteinModelPortal:Q756F0 SMR:Q756F0 STRING:Q756F0
EnsemblFungi:AAS52995 GeneID:4621384 KEGG:ago:AGOS_AER315C
PhylomeDB:Q756F0 Uniprot:Q756F0
Length = 146
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 90/137 (65%), Positives = 113/137 (82%)
Query: 1 MSLVANED--FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGE 58
MSLV E FQHILR+LNTNVDG KI++ALT+I+G+GRR AN++CKKADVD+NKRAGE
Sbjct: 1 MSLVVAEQGSFQHILRLLNTNVDGNIKIVYALTTIRGVGRRYANLICKKADVDLNKRAGE 60
Query: 59 LSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIR 118
L+ EL++++ ++ NP +KIP WFLNRQKD DG+ ++N L+ KLRDDLERLKKIR
Sbjct: 61 LTQEELERVVQIMQNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIR 120
Query: 119 NHRGLRHYWGLRVRGQH 135
HRG+RH+WGLRVRGQH
Sbjct: 121 AHRGIRHFWGLRVRGQH 137
>DICTYBASE|DDB_G0276415 [details] [associations]
symbol:rps18 "40S ribosomal protein S18"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS;IBA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS;IBA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 dictyBase:DDB_G0276415 GO:GO:0005829 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AAFI02000015 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
HAMAP:MF_01315 PANTHER:PTHR10871 OMA:FQHILRI KO:K02964
RefSeq:XP_643120.1 ProteinModelPortal:Q869U7 SMR:Q869U7
STRING:Q869U7 PRIDE:Q869U7 EnsemblProtists:DDB0231058
GeneID:8620525 KEGG:ddi:DDB_G0276415 ProtClustDB:PTZ00134
Uniprot:Q869U7
Length = 154
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 85/133 (63%), Positives = 112/133 (84%)
Query: 2 SLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSA 61
SLV +FQHI+R+ NTNVDG++KI +ALT +KG+GRR AN+VCKKAD+D +KRAGELS
Sbjct: 4 SLVFQGEFQHIIRIYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSK 63
Query: 62 AELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHR 121
E+++L ++ +PRQ+ IP WFLNRQKD KDG+YS ++N +D+K R+DLERLKKIR HR
Sbjct: 64 DEVERLTTIMNHPRQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHR 123
Query: 122 GLRHYWGLRVRGQ 134
G+RH++GLRVRGQ
Sbjct: 124 GVRHHFGLRVRGQ 136
>SGD|S000002858 [details] [associations]
symbol:RPS18A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=NAS;IBA] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0006407 "rRNA export from nucleus" evidence=IGI]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;NAS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 SGD:S000002858 EMBL:U33007 GO:GO:0005739
EMBL:BK006938 GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0000447 PDB:1S1H PDBsum:1S1H GO:GO:0022627 SUPFAM:SSF46946
PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB
PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C PDBsum:3U5G GO:GO:0006407
HAMAP:MF_01315 PANTHER:PTHR10871 PDB:1K5X PDBsum:1K5X PIR:S50886
RefSeq:NP_010738.1 RefSeq:NP_013686.1 ProteinModelPortal:P0CX55
SMR:P0CX55 EnsemblFungi:YDR450W EnsemblFungi:YML026C GeneID:852061
GeneID:854982 KEGG:sce:YDR450W KEGG:sce:YML026C KO:K02964
EvolutionaryTrace:P0CX55 NextBio:970337 ArrayExpress:P0CX55
GermOnline:YDR450W Uniprot:P0CX55
Length = 146
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 88/137 (64%), Positives = 112/137 (81%)
Query: 1 MSLVANED--FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGE 58
MSLV E FQHILR+LNTNVDG KI++ALT+IKG+GRR +N+VCKKADVD++KRAGE
Sbjct: 1 MSLVVQEQGSFQHILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGE 60
Query: 59 LSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIR 118
L+ EL++++ ++ NP +KIP WFLNRQ D DG+ ++N ++ KLRDDLERLKKIR
Sbjct: 61 LTQEELERIVQIMQNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIR 120
Query: 119 NHRGLRHYWGLRVRGQH 135
HRG+RH+WGLRVRGQH
Sbjct: 121 AHRGIRHFWGLRVRGQH 137
>SGD|S000004488 [details] [associations]
symbol:RPS18B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0006407 "rRNA
export from nucleus" evidence=IGI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;NAS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IBA;NAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 SGD:S000004488
GO:GO:0005739 EMBL:BK006946 GO:GO:0003735 GO:GO:0002181 EMBL:Z46659
GO:GO:0019843 GO:GO:0000447 GO:GO:0022627 SUPFAM:SSF46946
GO:GO:0006407 HAMAP:MF_01315 PANTHER:PTHR10871 PIR:S50886
RefSeq:NP_010738.1 RefSeq:NP_013686.1 EnsemblFungi:YDR450W
EnsemblFungi:YML026C GeneID:852061 GeneID:854982 KEGG:sce:YDR450W
KEGG:sce:YML026C KO:K02964 NextBio:970337 EMBL:X62392
ProteinModelPortal:P0CX56 SMR:P0CX56 GeneTree:ENSGT00390000012691
ArrayExpress:P0CX56 GermOnline:YML026C Uniprot:P0CX56
Length = 146
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 88/137 (64%), Positives = 112/137 (81%)
Query: 1 MSLVANED--FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGE 58
MSLV E FQHILR+LNTNVDG KI++ALT+IKG+GRR +N+VCKKADVD++KRAGE
Sbjct: 1 MSLVVQEQGSFQHILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGE 60
Query: 59 LSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIR 118
L+ EL++++ ++ NP +KIP WFLNRQ D DG+ ++N ++ KLRDDLERLKKIR
Sbjct: 61 LTQEELERIVQIMQNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIR 120
Query: 119 NHRGLRHYWGLRVRGQH 135
HRG+RH+WGLRVRGQH
Sbjct: 121 AHRGIRHFWGLRVRGQH 137
>MGI|MGI:3645266 [details] [associations]
symbol:Gm5321 "predicted gene 5321" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS50159 MGI:MGI:3645266
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
HOGENOM:HOG000039877 OrthoDB:EOG4KSPM2 EMBL:AC026949
IPI:IPI00111248 ProteinModelPortal:D3YWV7 SMR:D3YWV7 PRIDE:D3YWV7
Ensembl:ENSMUST00000072050 NextBio:404664 Uniprot:D3YWV7
Length = 148
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 90/152 (59%), Positives = 112/152 (73%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV E FQHILRVLNTN+DG QKI FA+T+IKG+GR A++V +KAD+D+ KRAGEL+
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGWQKIAFAITAIKGVGRSYAHVVLRKADIDLTKRAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
++ ++ NP+Q+KIPDWFLNRQKD KDG+Y QV++N LD KLR+DLE LKKIR H
Sbjct: 61 EC----VITIMQNPQQYKIPDWFLNRQKDVKDGKYRQVLANGLDNKLREDLEWLKKIRAH 116
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGL H+WG RV QH SKK+
Sbjct: 117 RGLHHFWGHRVCCQHTKTTGRRGCTMGVSKKK 148
>RGD|1565912 [details] [associations]
symbol:RGD1565912 "similar to ribosomal protein S18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IBA] [GO:0015935 "small ribosomal subunit"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 RGD:1565912 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003723 GO:GO:0003735
SUPFAM:SSF46946 GO:GO:0015935 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 IPI:IPI00367215
Ensembl:ENSRNOT00000043909 UCSC:RGD:1565912 Uniprot:D4AA93
Length = 146
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 74/152 (48%), Positives = 104/152 (68%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60
MSLV +E QHIL+VLNTN+D +Q+ FA+T+ KG +R A++V +KA +D+ K AGEL+
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELT 60
Query: 61 AAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNH 120
++++++ ++ NPRQ++IP QK +DGR SQV +N LD KLR++LERLKKIR H
Sbjct: 61 EDKVERVITIMQNPRQYEIP------QKGVRDGRCSQVPANGLDNKLREELERLKKIRAH 114
Query: 121 RGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
RGLRH+WGL V Q SKK+
Sbjct: 115 RGLRHFWGLHVHCQLTMSHGCRGYTVGASKKK 146
>UNIPROTKB|F1M6D1 [details] [associations]
symbol:F1M6D1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
GeneTree:ENSGT00390000012691 IPI:IPI00780536
Ensembl:ENSRNOT00000061181 OMA:RREDINL Uniprot:F1M6D1
Length = 137
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 64/117 (54%), Positives = 88/117 (75%)
Query: 7 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQ 66
E FQHIL+VLNT++D +QKI F IKG+GRR A++V +KAD+D+ KRA EL E+++
Sbjct: 6 EKFQHILQVLNTHIDWRQKIAFI---IKGVGRRYAHVVLRKADIDLTKRARELED-EVER 61
Query: 67 LMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGL 123
++ ++ NPRQ+ IPDWFLNRQKD K+G+ +N LD KL +DLE LK+I+ H GL
Sbjct: 62 VITIMQNPRQYTIPDWFLNRQKDVKNGK----CANGLDNKLCEDLEPLKRIQAHWGL 114
>UNIPROTKB|F1M2A2 [details] [associations]
symbol:F1M2A2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF46946 PANTHER:PTHR10871
IPI:IPI00777961 Ensembl:ENSRNOT00000059637 Uniprot:F1M2A2
Length = 117
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 63/117 (53%), Positives = 86/117 (73%)
Query: 10 QHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMV 69
QH+L +LNTN DG+ K FALT++KG+G+R A + +KAD+D+ KRAGE + E++++ +
Sbjct: 4 QHLLSILNTNFDGRWKTAFALTAVKGVGQRDAQAL-RKADIDLTKRAGERTG-EVERV-I 60
Query: 70 VVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHY 126
V N RQ KIP W LNRQ D KD +YSQV++N LD K R+ LE L+ IR HR LRH+
Sbjct: 61 VTQNLRQHKIPGWVLNRQMDEKDRKYSQVLANGLDSKSREYLEWLENIRAHRALRHF 117
>UNIPROTKB|J3JS69 [details] [associations]
symbol:RPS18 "HCG1777176, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:CH471081 GO:GO:0006412 EMBL:CH471052 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 GO:GO:0005581 EMBL:AL031228
EMBL:AL645940 EMBL:AL844527 EMBL:AL662827 EMBL:AL662820
EMBL:CR759817 EMBL:AL713971 SUPFAM:SSF46946 PANTHER:PTHR10871
UniGene:Hs.448854 UniGene:Hs.627414 HGNC:HGNC:10401
Ensembl:ENST00000474973 Ensembl:ENST00000476288
Ensembl:ENST00000477055 Ensembl:ENST00000484321
Ensembl:ENST00000486781 Ensembl:ENST00000494232 Uniprot:J3JS69
Length = 82
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 56/80 (70%), Positives = 63/80 (78%)
Query: 73 NPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132
NPRQ+KIPDWFLNRQKD KDG+YSQV++N LD KLR+DLERLKKIR HRGLRH+WGLRVR
Sbjct: 3 NPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVR 62
Query: 133 GQHXXXXXXXXXXXXXSKKR 152
GQH SKK+
Sbjct: 63 GQHTKTTGRRGRTVGVSKKK 82
>UNIPROTKB|Q8TRR2 [details] [associations]
symbol:rps13 "30S ribosomal protein S13" species:188937
"Methanosarcina acetivorans C2A" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019977 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0019843
EMBL:AE010299 GenomeReviews:AE010299_GR SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 HAMAP:MF_01315
PANTHER:PTHR10871 RefSeq:NP_616052.1 ProteinModelPortal:Q8TRR2
GeneID:1472997 KEGG:mac:MA1108 OMA:FQHILRI ProtClustDB:PRK04053
BioCyc:MACE188937:GI2O-1171-MONOMER TIGRFAMs:TIGR03629
Uniprot:Q8TRR2
Length = 162
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 51/147 (34%), Positives = 83/147 (56%)
Query: 6 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELD 65
NE+ +H++R++NT++ G + + +ALT + G+GRR A ++ K A VD + G L E+
Sbjct: 17 NEELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVA 76
Query: 66 QLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRH 125
+L + +P W LNRQKD G+ ++ + + R+D+ LKK+R +RGLRH
Sbjct: 77 KLDTAIGKFEDI-VPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRH 135
Query: 126 YWGLRVRGQHXXXXXXXXXXXXXSKKR 152
GL+VRGQ S+K+
Sbjct: 136 ERGLKVRGQRTKSTGRRGSTVGVSRKK 162
>UNIPROTKB|P95986 [details] [associations]
symbol:rps13 "30S ribosomal protein S13" species:273057
"Sulfolobus solfataricus P2" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019977 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AE006641
GenomeReviews:AE006641_GR GO:GO:0019843 EMBL:Y08257 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 HAMAP:MF_01315
PANTHER:PTHR10871 OMA:FQHILRI ProtClustDB:PRK04053
TIGRFAMs:TIGR03629 PIR:S75414 RefSeq:NP_341646.1
ProteinModelPortal:P95986 GeneID:1455327 KEGG:sso:SSO0074
HOGENOM:HOG000039877 Uniprot:P95986
Length = 165
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 52/147 (35%), Positives = 87/147 (59%)
Query: 6 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELD 65
++ F++++R+ +VDG K+ +AL +KGIG A + +K +D N R GELS AE+
Sbjct: 2 SQQFKYVVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVK 61
Query: 66 QLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRH 125
++ V+++ +P W NR+KDY+ G +V++ L +R+D+ER KK R+ RG+RH
Sbjct: 62 KVESVISDHTIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRH 121
Query: 126 YWGLRVRGQHXXXXXXXXXXXXXSKKR 152
GL+VRGQ ++K+
Sbjct: 122 SLGLKVRGQRTRTTGRTGMTIGVARKK 148
>UNIPROTKB|Q9GT46 [details] [associations]
symbol:IrpS18 "Ribosomal protein S18" species:7165
"Anopheles gambiae" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0003735 SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099
PANTHER:PTHR10871 EMBL:AF283268 ProteinModelPortal:Q9GT46
STRING:Q9GT46 InParanoid:Q9GT46 ArrayExpress:Q9GT46 Uniprot:Q9GT46
Length = 46
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 107 LRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 152
LR+DLERLK+I HRG+RHYWGLRVRGQH SKK+
Sbjct: 1 LREDLERLKRIHAHRGMRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 46
>TIGR_CMR|ECH_0430 [details] [associations]
symbol:ECH_0430 "ribosomal protein S13" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_507248.1
ProteinModelPortal:Q2GH35 SMR:Q2GH35 STRING:Q2GH35 GeneID:3927582
KEGG:ech:ECH_0430 PATRIC:20576337
BioCyc:ECHA205920:GJNR-431-MONOMER Uniprot:Q2GH35
Length = 123
Score = 94 (38.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEL 64
R+ N+ ++I+ ALT I GIG LAN +C+ ++D N R LS E+
Sbjct: 3 RIAGVNIPTNKRIVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEI 53
Score = 62 (26.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 94 RYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
R + +V L ++ +++ L I +RGLRH GL VRGQ
Sbjct: 61 RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQ 101
>TIGR_CMR|SO_0253 [details] [associations]
symbol:SO_0253 "ribosomal protein S13" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:NP_715893.1 ProteinModelPortal:Q8EK48
SMR:Q8EK48 GeneID:1168136 KEGG:son:SO_0253 PATRIC:23520199
Uniprot:Q8EK48
Length = 118
Score = 89 (36.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVA 72
R+ N+ ++ + ALT+I GIGR A +C + + ELS A++D L VA
Sbjct: 3 RIAGINIPDQKHTVIALTAIFGIGRTRARAICAATSIAETAKIKELSEAQIDTLREEVA 61
Score = 55 (24.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 98 VVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
+V L ++ +++RL + +RGLRH L +RGQ
Sbjct: 64 LVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQ 100
>UNIPROTKB|Q9X1I5 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:243274
"Thermotoga maritima MSB8" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:AE000512 GenomeReviews:AE000512_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 PIR:D72247 RefSeq:NP_229275.1
ProteinModelPortal:Q9X1I5 SMR:Q9X1I5 GeneID:897029 KEGG:tma:TM1475
PATRIC:23937906 Uniprot:Q9X1I5
Length = 125
Score = 87 (35.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVAN 73
R++ + +K+ ALT I GIGR + + K +D KR G+L+ E+ ++ + +
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKITKYIQD 62
Query: 74 PRQFKI 79
FK+
Sbjct: 63 --HFKV 66
Score = 65 (27.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 99 VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
V L ++ ++ RL +I +RG+RH GL VRGQ
Sbjct: 66 VEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQ 101
>UNIPROTKB|Q5GGW2 [details] [associations]
symbol:RPS18 "Rhabdomyosarcoma antigen MU-RMS-40.21"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] InterPro:IPR001892
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0022627
eggNOG:COG0099 PANTHER:PTHR10871 UniGene:Hs.448854
UniGene:Hs.627414 HGNC:HGNC:10401 EMBL:BX248408 EMBL:AY536376
IPI:IPI00894147 SMR:Q5GGW2 STRING:Q5GGW2 Ensembl:ENST00000440980
Uniprot:Q5GGW2
Length = 34
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 1 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIK 34
MSLV E FQHILRVLNTN+DG++KI FA+T+IK
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIK 34
>TIGR_CMR|APH_0301 [details] [associations]
symbol:APH_0301 "ribosomal protein S13" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
RefSeq:YP_504913.1 ProteinModelPortal:Q2GL38 SMR:Q2GL38
STRING:Q2GL38 GeneID:3931105 KEGG:aph:APH_0301 PATRIC:20949176
ProtClustDB:PRK05179 BioCyc:APHA212042:GHPM-331-MONOMER
Uniprot:Q2GL38
Length = 123
Score = 88 (36.0 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEL 64
R+ NV ++++ ALT I GIG LAN +C+ +D N R LS ++
Sbjct: 3 RIGGVNVPVDKRVVVALTYIYGIGTSLANRICEGCGIDKNVRVSALSEEDV 53
Score = 50 (22.7 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 98 VVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
VV L ++ +++ L I +RGLRH L VRGQ
Sbjct: 65 VVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQ 101
>UNIPROTKB|Q8HCP0 [details] [associations]
symbol:rps13 "Ribosomal protein S13" species:39947 "Oryza
sativa Japonica Group" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005739 "mitochondrion"
evidence=IC;IBA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0042254
"ribosome biogenesis" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005739 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 EMBL:BA000029 GenomeReviews:BA000029_GR
SUPFAM:SSF46946 GO:GO:0015935 KO:K02952 PANTHER:PTHR10871
RefSeq:YP_002000577.1 ProteinModelPortal:Q8HCP0 STRING:Q8HCP0
GeneID:6450193 KEGG:osa:6450193 Gramene:Q8HCP0 Uniprot:Q8HCP0
Length = 116
Score = 79 (32.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVV 71
+L +L + +++ ALT + GIG + A +C + + N + EL+ ++DQ+ ++
Sbjct: 1 MLYILGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKMNELTKYQIDQIEQMI 60
Query: 72 ANPRQFKIPDWFLNR 86
A Q + W L R
Sbjct: 61 A---QDHVVHWELKR 72
Score = 70 (29.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 108 RDDLERLKKIRNHRGLRHYWGLRVRGQ 134
R D+ERL I +RG+RH GL +RGQ
Sbjct: 75 RADIERLISISCYRGIRHQDGLPLRGQ 101
>TIGR_CMR|CHY_2284 [details] [associations]
symbol:CHY_2284 "ribosomal protein S13" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_361093.1
ProteinModelPortal:Q3A9U1 SMR:Q3A9U1 STRING:Q3A9U1 GeneID:3726461
KEGG:chy:CHY_2284 PATRIC:21277639 HOGENOM:HOG000039878
BioCyc:CHYD246194:GJCN-2283-MONOMER Uniprot:Q3A9U1
Length = 123
Score = 83 (34.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQL 67
R+ ++ +++ ALT I GIGR AN++ KK ++ + R +L+ E+ +L
Sbjct: 3 RIAGVDLPRDKRVEIALTYIYGIGRPTANVILKKTGINPDTRVKDLTEEEVAKL 56
Score = 62 (26.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 99 VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
V L ++ +++RL +I +RG+RH GL VRGQ
Sbjct: 66 VEGELRREVALNIKRLIEIGCYRGIRHRKGLPVRGQ 101
Score = 36 (17.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 106 KLRDDLERLKKIRNHRGLRHYWGLRVR 132
KLRD++E+ K+ LR L ++
Sbjct: 55 KLRDEIEKNYKVEGE--LRREVALNIK 79
>UNIPROTKB|A6UZL0 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:381754
"Pseudomonas aeruginosa PA7" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:CP000744
GenomeReviews:CP000744_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_001346245.1
ProteinModelPortal:A6UZL0 SMR:A6UZL0 STRING:A6UZL0 PRIDE:A6UZL0
GeneID:5355004 KEGG:pap:PSPA7_0859 PATRIC:19823551
BioCyc:PAER381754:GHMY-924-MONOMER Uniprot:A6UZL0
Length = 118
Score = 79 (32.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVA 72
R+ N+ + + +LT I G+GR A +C V+ + +LS ++DQL VA
Sbjct: 3 RIAGVNIPDNKHTVISLTYIYGVGRTTAQNICAATGVNPAAKIKDLSDEQIDQLRNEVA 61
Score = 62 (26.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 103 LDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
L ++ +++RL + +RGLRH GL VRGQ
Sbjct: 69 LRREINMNIKRLMDLGCYRGLRHRRGLPVRGQ 100
>UNIPROTKB|Q3KLI8 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:315277
"Chlamydia trachomatis A/HAR-13" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:CP000051 GenomeReviews:CP000051_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:YP_328332.1
ProteinModelPortal:Q3KLI8 SMR:Q3KLI8 STRING:Q3KLI8 GeneID:3687704
KEGG:cta:CTA_0558 PATRIC:32023022
BioCyc:CTRA315277:GI4C-584-MONOMER Uniprot:Q3KLI8
Length = 122
Score = 77 (32.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQL 67
R++ ++ K+K+ +LT I GIG L+ + + ++ RA EL+ E+ +L
Sbjct: 3 RIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRL 56
Score = 69 (29.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 98 VVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
VV L +++ D++RL I +RG RH L VRGQ
Sbjct: 65 VVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQ 101
>UNIPROTKB|P20282 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0042254
"ribosome biogenesis" evidence=IBA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735
EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 EMBL:L47971 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 EMBL:M26414 EMBL:M13957
PIR:C32307 RefSeq:NP_388022.2 ProteinModelPortal:P20282 SMR:P20282
EnsemblBacteria:EBBACT00000002700 GeneID:938928 KEGG:bsu:BSU01410
PATRIC:18971793 GenoList:BSU01410 BioCyc:BSUB:BSU01410-MONOMER
Uniprot:P20282
Length = 121
Score = 78 (32.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVV 71
R+ ++ ++++ +LT I GIGR A V K+A V + R +L+ EL ++ ++
Sbjct: 3 RIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60
Score = 66 (28.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 110 DLERLKKIRNHRGLRHYWGLRVRGQH 135
+++RL +I ++RG+RH GL VRGQ+
Sbjct: 76 NIKRLIEIGSYRGIRHRRGLPVRGQN 101
>ASPGD|ASPL0000076821 [details] [associations]
symbol:AN4468 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0042173 "regulation of
sporulation resulting in formation of a cellular spore"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:BN001303 SUPFAM:SSF46946 PANTHER:PTHR10871
OMA:RSATTLF EnsemblFungi:CADANIAT00005983 Uniprot:C8V8H2
Length = 119
Score = 83 (34.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 99 VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
+ N L ++ DD++RLK+ +RG RH GL VRGQ
Sbjct: 65 IENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQ 100
Score = 48 (22.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 11/58 (18%), Positives = 28/58 (48%)
Query: 15 VLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVA 72
+L N Q + +L G+G ++++ + + + + GEL+ ++ L V++
Sbjct: 4 ILGVNFPEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVLS 61
>UNIPROTKB|P0A7S9 [details] [associations]
symbol:rpsM species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 EMBL:U18997 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 PDB:3J00 PDBsum:3J00 PDB:3FIH PDB:3IZV PDB:3IZW
PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 SUPFAM:SSF46946
PDB:3SFS PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ EMBL:X02543 EMBL:M12432
eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631 PDB:4GAS
PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87
PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P
PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF
PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO
PDB:2VHP PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3
PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z
PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13
PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO
PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV
PDB:4GAQ PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M
PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M
PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21
PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10
PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR
PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX
PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV
PDBsum:4GAQ PDBsum:4GD2 ProtClustDB:PRK05179 EMBL:M10213 PIR:A23807
RefSeq:NP_417757.1 RefSeq:YP_492134.1 ProteinModelPortal:P0A7S9
SMR:P0A7S9 DIP:DIP-35855N IntAct:P0A7S9 MINT:MINT-1290225
PaxDb:P0A7S9 PRIDE:P0A7S9 EnsemblBacteria:EBESCT00000003493
EnsemblBacteria:EBESCT00000015980 GeneID:12934445 GeneID:947791
KEGG:ecj:Y75_p3878 KEGG:eco:b3298 PATRIC:32122028 EchoBASE:EB0905
EcoGene:EG10912 BioCyc:EcoCyc:EG10912-MONOMER
BioCyc:ECOL316407:JW3260-MONOMER EvolutionaryTrace:P0A7S9
Genevestigator:P0A7S9 Uniprot:P0A7S9
Length = 118
Score = 74 (31.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVA 72
R+ N+ + + ALTSI G+G+ + + A + + + ELS ++D L VA
Sbjct: 3 RIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 61
Score = 66 (28.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 98 VVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
VV L ++ ++RL + +RGLRH GL VRGQ
Sbjct: 64 VVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQ 100
>TIGR_CMR|NSE_0287 [details] [associations]
symbol:NSE_0287 "ribosomal protein S13" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR
SUPFAM:SSF46946 eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952
OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:YP_506178.1 ProteinModelPortal:Q2GEB8
SMR:Q2GEB8 STRING:Q2GEB8 PRIDE:Q2GEB8 GeneID:3932234
KEGG:nse:NSE_0287 PATRIC:22680667
BioCyc:NSEN222891:GHFU-314-MONOMER Uniprot:Q2GEB8
Length = 123
Score = 82 (33.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 13 LRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVA 72
+R L N+ + ++ ALT + GIG A +C +D + + +L +L+ +M +
Sbjct: 1 MRFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIK 60
Query: 73 NPRQFK 78
N F+
Sbjct: 61 NDIPFE 66
Score = 51 (23.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 111 LERLKKIRNHRGLRHYWGLRVRGQ 134
++ L I+ +RG+RH L VRGQ
Sbjct: 77 IKHLVDIKCYRGVRHRKNLPVRGQ 100
>UNIPROTKB|O86773 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:100226
"Streptomyces coelicolor A3(2)" [GO:0003735 "structural constituent
of ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 EMBL:AL939121
GenomeReviews:AL645882_GR GO:GO:0000049 GO:GO:0019843
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 PIR:T35556
RefSeq:NP_628885.1 ProteinModelPortal:O86773 SMR:O86773
PhosSite:P11111095 GeneID:1100168 KEGG:sco:SCO4727 PATRIC:23739276
Uniprot:O86773
Length = 126
Score = 74 (31.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVAN 73
RV ++ ++++ ALT + GIGR L+ VD N R +LS +L + V N
Sbjct: 3 RVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYVDN 62
Score = 64 (27.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 88 KDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
++Y D L +++ D+ R +I ++GLRH GL VRGQ
Sbjct: 57 REYVDNNIK--TEGDLRREVQADIRRKVEIGTYQGLRHRRGLPVRGQ 101
>UNIPROTKB|Q9XD12 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:189518
"Leptospira interrogans serovar Lai str. 56601" [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] [GO:0006412 "translation" evidence=IBA]
[GO:0015935 "small ribosomal subunit" evidence=IBA] [GO:0042254
"ribosome biogenesis" evidence=IBA] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005829 GO:GO:0006412 GO:GO:0042254 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 GO:GO:0015935
EMBL:AE010300 GenomeReviews:AE010300_GR eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
EMBL:AF115283 RefSeq:NP_710943.1 ProteinModelPortal:Q9XD12
SMR:Q9XD12 PaxDb:Q9XD12 PRIDE:Q9XD12 GeneID:1150105
KEGG:lil:LA_0762 PATRIC:22382384 BioCyc:LINT189518:GJBB-621-MONOMER
Uniprot:Q9XD12
Length = 125
Score = 75 (31.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAE 63
R+ ++ +++I+ LT I GIG L+ ++ KKA +D + R +L+ ++
Sbjct: 3 RIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQ 52
Score = 61 (26.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 99 VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
V L +++ +++RL I +RGLRH GL V GQ
Sbjct: 66 VEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQ 101
>TIGR_CMR|BA_0135 [details] [associations]
symbol:BA_0135 "ribosomal protein S13" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
RefSeq:NP_842703.1 RefSeq:YP_016740.1 RefSeq:YP_026421.1
ProteinModelPortal:P62176 SMR:P62176 DNASU:1085954
EnsemblBacteria:EBBACT00000008086 EnsemblBacteria:EBBACT00000018614
EnsemblBacteria:EBBACT00000020746 GeneID:1085954 GeneID:2819393
GeneID:2850910 KEGG:ban:BA_0135 KEGG:bar:GBAA_0135 KEGG:bat:BAS0135
BioCyc:BANT260799:GJAJ-146-MONOMER
BioCyc:BANT261594:GJ7F-148-MONOMER Uniprot:P62176
Length = 121
Score = 70 (29.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 14/26 (53%), Positives = 21/26 (80%)
Query: 110 DLERLKKIRNHRGLRHYWGLRVRGQH 135
+++RL +I ++RGLRH GL VRGQ+
Sbjct: 76 NIKRLMEIGSYRGLRHRRGLPVRGQN 101
Score = 67 (28.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVV 71
R+ ++ ++++ +LT + GIGR A + +A + R +L+ EL ++ ++
Sbjct: 3 RIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60
>TIGR_CMR|CPS_0623 [details] [associations]
symbol:CPS_0623 "ribosomal protein S13" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946
eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:YP_267373.1 ProteinModelPortal:Q488Z1
SMR:Q488Z1 STRING:Q488Z1 PRIDE:Q488Z1 GeneID:3519508
KEGG:cps:CPS_0623 PATRIC:21464573
BioCyc:CPSY167879:GI48-710-MONOMER Uniprot:Q488Z1
Length = 118
Score = 77 (32.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVV 71
R+ N+ ++ + A+T+I GIG A +C + + + EL A++D L V
Sbjct: 3 RIAGINIPDRKHAVIAITAIYGIGATRAKAICAATGIAESTKISELDEAKIDLLRAEV 60
Score = 51 (23.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 99 VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
V L ++ +++RL + +RG+RH L +RGQ
Sbjct: 65 VEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQ 100
>UNIPROTKB|Q89JA6 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:224911
"Bradyrhizobium japonicum USDA 110" [GO:0003735 "structural
constituent of ribosome" evidence=IBA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IBA] [GO:0015935
"small ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome
biogenesis" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 SUPFAM:SSF46946 GO:GO:0015935 EMBL:BA000040
GenomeReviews:BA000040_GR eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 RefSeq:NP_772018.1
ProteinModelPortal:Q89JA6 SMR:Q89JA6 GeneID:1051268
KEGG:bja:bll5378 PATRIC:21194446
BioCyc:BJAP224911:GJEJ-5418-MONOMER Uniprot:Q89JA6
Length = 122
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 17/58 (29%), Positives = 36/58 (62%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVV 71
R+ N+ ++++ AL I GIG+++A + +K + +++R +LS AE+ Q+ V+
Sbjct: 3 RIAGVNIPTNKRVLIALQYIHGIGQKIAGEILEKVKIPVDRRVSQLSDAEVLQIREVI 60
>TIGR_CMR|SPO_0509 [details] [associations]
symbol:SPO_0509 "ribosomal protein S13" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR001892
InterPro:IPR010979 InterPro:IPR018269 InterPro:IPR019980
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946
eggNOG:COG0099 HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 RefSeq:YP_165771.1 ProteinModelPortal:Q5LW34
SMR:Q5LW34 GeneID:3195393 KEGG:sil:SPO0509 PATRIC:23374281
Uniprot:Q5LW34
Length = 122
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEL 64
R+ N+ +++ ALT I GIG A +C+ +D +R ELS AE+
Sbjct: 3 RIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIDATRRVNELSDAEI 53
>UNIPROTKB|Q5B4R2 [details] [associations]
symbol:AN4468.2 "Putative uncharacterized protein"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003735
"structural constituent of ribosome" evidence=IBA] [GO:0005739
"mitochondrion" evidence=IBA] [GO:0006412 "translation"
evidence=IBA] [GO:0015935 "small ribosomal subunit" evidence=IBA]
[GO:0042254 "ribosome biogenesis" evidence=IBA] [GO:0005829
"cytosol" evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0005739 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0003735 EMBL:AACD01000077 SUPFAM:SSF46946
GO:GO:0015935 eggNOG:COG0099 KO:K02952 PANTHER:PTHR10871
HOGENOM:HOG000039878 OrthoDB:EOG4WHCWG RefSeq:XP_662072.1
ProteinModelPortal:Q5B4R2 STRING:Q5B4R2 GeneID:2872269
KEGG:ani:AN4468.2 Uniprot:Q5B4R2
Length = 130
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 99 VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
+ N L ++ DD++RLK+ +RG RH GL VRGQ
Sbjct: 63 IENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQ 98
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/59 (20%), Positives = 30/59 (50%)
Query: 15 VLNTNV-DGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVA 72
+L N +G+ K +L G+G ++++ + + + + GEL+ ++ L V++
Sbjct: 4 ILGVNFPEGQLK---SLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVLS 59
>TIGR_CMR|CBU_0260 [details] [associations]
symbol:CBU_0260 "ribosomal protein S13/S18" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
RefSeq:NP_819304.1 ProteinModelPortal:P59753 SMR:P59753
GeneID:1208141 KEGG:cbu:CBU_0260 PATRIC:17929213
BioCyc:CBUR227377:GJ7S-267-MONOMER Uniprot:P59753
Length = 119
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 35/116 (30%), Positives = 52/116 (44%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVAN 73
R+ N+ ++ AL +I GIG A +CK+A +D + +LS AELD L V
Sbjct: 4 RIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG- 62
Query: 74 PRQFKIP-DWFLNRQKDYK---D-GRYSQVVSNALDMKLRDDLERLKKIRNHRGLR 124
+F + D R D K D G Y + + + + LR R R +G R
Sbjct: 63 --KFSVEGDLRRERSMDIKRKMDLGAY-EGIRHRRGLPLRGQRTR-SNARTRKGKR 114
>TIGR_CMR|CJE_1764 [details] [associations]
symbol:CJE_1764 "ribosomal protein S13/S18" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
HOGENOM:HOG000039879 KO:K02952 OMA:REVAMNI HAMAP:MF_01315
PANTHER:PTHR10871 TIGRFAMs:TIGR03631 ProtClustDB:PRK05179
RefSeq:YP_179736.1 ProteinModelPortal:Q5HSJ9 SMR:Q5HSJ9
STRING:Q5HSJ9 GeneID:3232391 KEGG:cjr:CJE1764 PATRIC:20045338
BioCyc:CJEJ195099:GJC0-1794-MONOMER Uniprot:Q5HSJ9
Length = 121
Score = 67 (28.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAE 63
R+ ++ K++I + LT I GIG + + K + +KR ELS E
Sbjct: 3 RIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRVHELSEDE 52
Score = 65 (27.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 91 KDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
K+ + + +V L ++ D++ L + + RGLRH GL VRGQ
Sbjct: 58 KEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQ 101
>UNIPROTKB|Q9KP05 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 PIR:D82061
RefSeq:NP_232202.1 ProteinModelPortal:Q9KP05 SMR:Q9KP05
DNASU:2615591 GeneID:2615591 KEGG:vch:VC2574 PATRIC:20084174
Uniprot:Q9KP05
Length = 118
Score = 68 (29.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVA 72
R+ N+ + + ALT+I GIG+ + + + + + EL+ ++DQL VA
Sbjct: 3 RIAGINIPDHKHAVIALTAIYGIGKTRSKAILADLGIAESVKISELTEEQIDQLRDGVA 61
Score = 61 (26.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 91 KDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
+DG V L ++ +++RL + +RGLRH L +RGQ
Sbjct: 57 RDGVAKYTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQ 100
>TIGR_CMR|VC_2574 [details] [associations]
symbol:VC_2574 "ribosomal protein S13" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
InterPro:IPR019980 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 SUPFAM:SSF46946 eggNOG:COG0099 KO:K02952 OMA:REVAMNI
HAMAP:MF_01315 PANTHER:PTHR10871 TIGRFAMs:TIGR03631
ProtClustDB:PRK05179 PIR:D82061 RefSeq:NP_232202.1
ProteinModelPortal:Q9KP05 SMR:Q9KP05 DNASU:2615591 GeneID:2615591
KEGG:vch:VC2574 PATRIC:20084174 Uniprot:Q9KP05
Length = 118
Score = 68 (29.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVA 72
R+ N+ + + ALT+I GIG+ + + + + + EL+ ++DQL VA
Sbjct: 3 RIAGINIPDHKHAVIALTAIYGIGKTRSKAILADLGIAESVKISELTEEQIDQLRDGVA 61
Score = 61 (26.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 91 KDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 134
+DG V L ++ +++RL + +RGLRH L +RGQ
Sbjct: 57 RDGVAKYTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQ 100
>POMBASE|SPCC1795.07 [details] [associations]
symbol:SPCC1795.07 "mitochondrial ribosomal protein
subunit S37 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0032543 "mitochondrial translation"
evidence=ISO] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646
PROSITE:PS50159 PomBase:SPCC1795.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0032543
GO:GO:0019843 GO:GO:0005763 SUPFAM:SSF46946 eggNOG:COG0099
KO:K02952 HAMAP:MF_01315 PANTHER:PTHR10871 HOGENOM:HOG000039878
OMA:RSATTLF PIR:T41136 RefSeq:NP_588037.1 ProteinModelPortal:O59772
STRING:O59772 EnsemblFungi:SPCC1795.07.1 GeneID:2538943
KEGG:spo:SPCC1795.07 OrthoDB:EOG4WHCWG NextBio:20800119
Uniprot:O59772
Length = 151
Score = 68 (29.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 110 DLERLKKIRNHRGLRHYWGLRVRGQH 135
D+ RL IR +RG+RH GL V GQ+
Sbjct: 76 DISRLVNIRCYRGMRHVNGLPVNGQN 101
Score = 67 (28.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 15 VLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQL 67
+L V+ + + FAL S GIG A +C K R EL+ +L L
Sbjct: 4 ILGVAVNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTL 56
>UNIPROTKB|O66486 [details] [associations]
symbol:rpsM "30S ribosomal protein S13" species:224324
"Aquifex aeolicus VF5" [GO:0003735 "structural constituent of
ribosome" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006412 "translation" evidence=IBA] [GO:0015935 "small
ribosomal subunit" evidence=IBA] [GO:0042254 "ribosome biogenesis"
evidence=IBA] InterPro:IPR001892 InterPro:IPR010979
InterPro:IPR018269 InterPro:IPR019980 Pfam:PF00416
PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159 GO:GO:0005829
GO:GO:0006412 GO:GO:0042254 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 EMBL:AE000657 GenomeReviews:AE000657_GR
SUPFAM:SSF46946 GO:GO:0015935 eggNOG:COG0099 HOGENOM:HOG000039879
KO:K02952 OMA:REVAMNI HAMAP:MF_01315 PANTHER:PTHR10871
TIGRFAMs:TIGR03631 ProtClustDB:PRK05179 PIR:C70307
RefSeq:NP_213046.1 ProteinModelPortal:O66486 SMR:O66486
GeneID:1192499 KEGG:aae:aq_074 PATRIC:20957847
BioCyc:AAEO224324:GJBH-61-MONOMER Uniprot:O66486
Length = 126
Score = 89 (36.4 bits), Expect = 0.00074, P = 0.00074
Identities = 33/117 (28%), Positives = 55/117 (47%)
Query: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVAN 73
R+ ++ +++ ALT I GIG A +C+K + KR GEL+ EL+ L +
Sbjct: 3 RIAGVDLPNNKRLEVALTYIYGIGWSRAREICEKTGIPCTKRVGELTPDELNTLRKFI-- 60
Query: 74 PRQFKIPDWFLNRQ-----KDYKD-GRYSQVVSNALDMKLRDDLERLKKIRNHRGLR 124
+K+ + L R+ K KD G Y + + +A + +R R R +G R
Sbjct: 61 DENYKV-EGDLRREVQLNIKKLKDMGCY-RGIRHARGLPVRGQQTRTNA-RTRKGKR 114
>UNIPROTKB|Q2F922 [details] [associations]
symbol:rps13 "Ribosomal protein S13" species:39947 "Oryza
sativa Japonica Group" [GO:0005739 "mitochondrion" evidence=IC]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:DQ167807 EMBL:DQ167400 SUPFAM:SSF46946
eggNOG:COG0099 HOGENOM:HOG000039879 PANTHER:PTHR10871
ProteinModelPortal:Q2F922 STRING:Q2F922 Gramene:Q2F922 OMA:NARTARK
Uniprot:Q2F922
Length = 116
Score = 67 (28.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 108 RDDLERLKKIRNHRGLRHYWGLRVRGQ 134
R D+ERL I +RG+RH G +RGQ
Sbjct: 75 RADIERLISISRYRGIRHQDGSPLRGQ 101
Score = 57 (25.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 24 QKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWF 83
+++ A T + GIG + A + + + N + EL+ ++DQ+ ++A Q + W
Sbjct: 13 EQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMIA---QDHVVHWE 69
Query: 84 LNR 86
L R
Sbjct: 70 LKR 72
>UNIPROTKB|Q2F974 [details] [associations]
symbol:rps13 "Ribosomal protein S13" species:39946 "Oryza
sativa Indica Group" [GO:0005739 "mitochondrion" evidence=IC]
InterPro:IPR001892 InterPro:IPR010979 InterPro:IPR018269
Pfam:PF00416 PIRSF:PIRSF002134 PROSITE:PS00646 PROSITE:PS50159
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 EMBL:DQ167399 SUPFAM:SSF46946 PANTHER:PTHR10871
EMBL:JN861111 EMBL:JN861112 EMBL:JF281153 EMBL:JF281154
EMBL:AP011077 RefSeq:YP_514659.1 ProteinModelPortal:Q2F974
GeneID:3950763 Gramene:Q2F974 Uniprot:Q2F974
Length = 116
Score = 67 (28.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 108 RDDLERLKKIRNHRGLRHYWGLRVRGQ 134
R D+ERL I +RG+RH G +RGQ
Sbjct: 75 RADIERLISISRYRGIRHQDGSPLRGQ 101
Score = 57 (25.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 24 QKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWF 83
+++ A T + GIG + A + + + N + EL+ ++DQ+ ++A Q + W
Sbjct: 13 EQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMIA---QDHVVHWE 69
Query: 84 LNR 86
L R
Sbjct: 70 LKR 72
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 152 139 0.00091 102 3 11 22 0.39 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 572 (61 KB)
Total size of DFA: 128 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.76u 0.07s 13.83t Elapsed: 00:00:02
Total cpu time: 13.76u 0.07s 13.83t Elapsed: 00:00:02
Start: Tue May 21 01:05:12 2013 End: Tue May 21 01:05:14 2013