BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031814
MQMILSSSSSSLPIPSFPCKCFSTFHALRTFFPQKKHIVRCSSSHNLKDNGFHCKVKLKR
RVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGFEV
KVVTSENYTKRDSGLIYRDFEVGKGNFPLYWL

High Scoring Gene Products

Symbol, full name Information P value
AT3G60370 protein from Arabidopsis thaliana 3.8e-30
P0477A12.35
Peptidyl-prolyl cis-trans isomerase
protein from Oryza sativa Japonica Group 1.9e-26
FKB20-2
Peptidyl-prolyl cis-trans isomerase
protein from Chlamydomonas reinhardtii 2.2e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031814
        (152 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2103366 - symbol:AT3G60370 "AT3G60370" species...   333  3.8e-30   1
UNIPROTKB|Q7XHR0 - symbol:P0477A12.35 "Peptidyl-prolyl ci...   298  1.9e-26   1
UNIPROTKB|A8HTG4 - symbol:FKB20-2 "Peptidyl-prolyl cis-tr...   158  2.2e-11   1


>TAIR|locus:2103366 [details] [associations]
            symbol:AT3G60370 "AT3G60370" species:3702 "Arabidopsis
            thaliana" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
            activity" evidence=ISS;IDA] [GO:0005528 "FK506 binding"
            evidence=ISS;IBA] [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0006457 "protein folding" evidence=IEA] [GO:0016020 "membrane"
            evidence=IBA] [GO:0018208 "peptidyl-proline modification"
            evidence=IBA] [GO:0009543 "chloroplast thylakoid lumen"
            evidence=IDA] [GO:0031977 "thylakoid lumen" evidence=IDA]
            [GO:0009579 "thylakoid" evidence=IDA] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0010207 "photosystem II assembly"
            evidence=RCA;IMP] [GO:0016491 "oxidoreductase activity"
            evidence=IDA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
            "thylakoid membrane organization" evidence=RCA] [GO:0019761
            "glucosinolate biosynthetic process" evidence=RCA] [GO:0035304
            "regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
            "transcription from plastid promoter" evidence=RCA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=RCA]
            InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059 GO:GO:0009507
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006457 GO:GO:0016020
            GO:GO:0016491 EMBL:AL138646 GO:GO:0031977 GO:GO:0003755
            GO:GO:0009543 eggNOG:COG0545 GO:GO:0005528 InterPro:IPR023566
            PANTHER:PTHR10516 EMBL:BT029531 EMBL:AK228309 IPI:IPI00519897
            PIR:T47848 RefSeq:NP_567098.2 UniGene:At.34461
            ProteinModelPortal:Q0WRJ7 SMR:Q0WRJ7 IntAct:Q0WRJ7 STRING:Q0WRJ7
            PaxDb:Q0WRJ7 PRIDE:Q0WRJ7 EnsemblPlants:AT3G60370.1 GeneID:825208
            KEGG:ath:AT3G60370 TAIR:At3g60370 HOGENOM:HOG000012423
            InParanoid:Q0WRJ7 OMA:GIRDMKP PhylomeDB:Q0WRJ7
            ProtClustDB:CLSN2680467 Genevestigator:Q0WRJ7 GO:GO:0010207
            Uniprot:Q0WRJ7
        Length = 242

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 69/112 (61%), Positives = 85/112 (75%)

Query:    39 VRCSSSHNLKDNGFHCKVKLKRRVVPFLLFSSG--LFPTLSASGKTKSKNPYDEKRLLEQ 96
             V CS S   KD    C   L RR + ++L +S   L P LS+S KTKSK+PYDE+RLLEQ
Sbjct:    30 VCCSLSEEPKDQ---C---LSRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDERRLLEQ 83

Query:    97 NKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGNFP 148
             NKR+Q+EN+AP+ FPNF+REGFEVKV+ S+NY K DSGLIYRDF VG+G+FP
Sbjct:    84 NKRIQRENNAPDEFPNFVREGFEVKVLASDNYIKADSGLIYRDFNVGQGDFP 135


>UNIPROTKB|Q7XHR0 [details] [associations]
            symbol:P0477A12.35 "Peptidyl-prolyl cis-trans isomerase"
            species:39947 "Oryza sativa Japonica Group" [GO:0000413 "protein
            peptidyl-prolyl isomerization" evidence=ISS] [GO:0003755
            "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS]
            [GO:0005528 "FK506 binding" evidence=ISS] [GO:0016020 "membrane"
            evidence=ISS] [GO:0018208 "peptidyl-proline modification"
            evidence=ISS] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            GO:GO:0006457 GO:GO:0016020 EMBL:AP008213 GO:GO:0003755
            GO:GO:0005528 InterPro:IPR023566 PANTHER:PTHR10516
            HOGENOM:HOG000012423 ProtClustDB:CLSN2680467 HSSP:P18203
            EMBL:AP005190 RefSeq:NP_001059674.1 UniGene:Os.20200 STRING:Q7XHR0
            GeneID:4343267 KEGG:osa:4343267 Uniprot:Q7XHR0
        Length = 258

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 56/90 (62%), Positives = 69/90 (76%)

Query:    59 KRRVVPFLLFSSGLFPTLSASGKTKSKNPYDEKRLLEQNKRMQKENSAPEGFPNFIREGF 118
             +R  +  LL S  +    SA GKTKS+NPYDE+RLL+QNK++Q+ N AP+ FPNFIREGF
Sbjct:    63 RRAALALLLASPAMSVAFSAHGKTKSRNPYDERRLLQQNKKIQEANRAPDDFPNFIREGF 122

Query:   119 EVKVVTSENYTKRDSGLIYRDFEVGKGNFP 148
             EVKVVTS+NY  RDSGL+Y D +VG GN P
Sbjct:   123 EVKVVTSDNYITRDSGLLYEDIKVGTGNSP 152


>UNIPROTKB|A8HTG4 [details] [associations]
            symbol:FKB20-2 "Peptidyl-prolyl cis-trans isomerase"
            species:3055 "Chlamydomonas reinhardtii" [GO:0000413 "protein
            peptidyl-prolyl isomerization" evidence=ISS] [GO:0003755
            "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS]
            [GO:0005528 "FK506 binding" evidence=ISS] [GO:0016020 "membrane"
            evidence=ISS] [GO:0018208 "peptidyl-proline modification"
            evidence=ISS] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            GO:GO:0006457 GO:GO:0016020 GO:GO:0003755 eggNOG:COG0545
            GO:GO:0005528 InterPro:IPR023566 PANTHER:PTHR10516
            ProtClustDB:CLSN2680467 EMBL:DS496109 RefSeq:XP_001693547.1
            UniGene:Cre.14323 ProteinModelPortal:A8HTG4 ProMEX:A8HTG4
            EnsemblPlants:EDP08801 GeneID:5719268 KEGG:cre:CHLREDRAFT_188000
            BioCyc:CHLAMY:CHLREDRAFT_188000-MONOMER Uniprot:A8HTG4
        Length = 269

 Score = 158 (60.7 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 32/60 (53%), Positives = 40/60 (66%)

Query:    90 EKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGNFPL 149
             EK +L  N+R+Q +N  P  FP FIREGF+VKV+  E Y    SGLIY+DFE G G  P+
Sbjct:   106 EKLVLNLNRRIQTQNRVPVDFPGFIREGFDVKVL-GEGYQVAPSGLIYKDFEEGTGPLPV 164


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      152       139   0.00091  102 3  11 22  0.40    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  137 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.82u 0.08s 16.90t   Elapsed:  00:00:01
  Total cpu time:  16.82u 0.08s 16.90t   Elapsed:  00:00:01
  Start:  Mon May 20 14:57:11 2013   End:  Mon May 20 14:57:12 2013

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