Query 031814
Match_columns 152
No_of_seqs 23 out of 25
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 08:49:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031814.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031814hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jvwa_ d.26.1.1 (A:) Macropha 93.0 0.017 1.2E-06 41.1 1.7 49 88-150 3-52 (160)
2 d1q6ha_ d.26.1.1 (A:) Peptidyl 89.6 0.1 7.5E-06 38.0 2.9 26 125-150 99-124 (210)
3 d1fd9a_ d.26.1.1 (A:) Macropha 84.4 0.29 2.1E-05 35.3 2.8 25 125-149 90-114 (204)
4 d1g2ia_ c.23.16.2 (A:) Intrace 58.1 3.6 0.00026 27.3 2.9 25 113-137 23-48 (166)
5 d1p5fa_ c.23.16.2 (A:) DJ-1 {H 35.2 13 0.00091 25.0 2.8 23 115-137 26-50 (186)
6 d2fexa1 c.23.16.2 (A:1-188) Hy 31.6 16 0.0012 25.1 2.9 23 116-138 28-51 (188)
7 d2b59b2 b.3.2.2 (B:8-103) Cell 28.4 16 0.0012 25.1 2.4 23 111-133 19-41 (96)
8 d1k8qa_ c.69.1.6 (A:) Gastric 27.3 17 0.0013 24.0 2.3 23 78-103 1-23 (377)
9 d2bisa1 c.87.1.8 (A:1-437) Gly 26.9 9.6 0.0007 26.6 1.0 16 111-126 27-42 (437)
10 d1u9ca_ c.23.16.2 (A:) GK2698 20.7 19 0.0014 25.4 1.6 16 112-127 34-49 (221)
No 1
>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}
Probab=93.04 E-value=0.017 Score=41.11 Aligned_cols=49 Identities=24% Similarity=0.447 Sum_probs=34.4
Q ss_pred hhHHHHHHHhHhhhhhcCCCCCcchhhhccceeEEecCCCceecCCceeeeeeccccCC-CCCC
Q 031814 88 YDEKRLLEQNKRMQKENSAPEGFPNFIREGFEVKVVTSENYTKRDSGLIYRDFEVGKGN-FPLY 150 (152)
Q Consensus 88 ydEkrlL~~N~RIQ~~NnaP~DFP~FIREGfdVKVv~~d~Yv~~dsGLIYkDf~~G~G~-~Pk~ 150 (152)
-+|+|+-++++++.+. |+.+- -..+|+++.+|||.|++.+.|+|+ .|+.
T Consensus 3 ~~eek~~~~~~~~~~~---------f~~~~-----~~~~~~~~~~sGl~y~il~~G~G~~~P~~ 52 (160)
T d1jvwa_ 3 SHEERMNNYRKRVGRL---------FMEQK-----AAQPDAVKLPSGLVFQRIARGSGKRAPAI 52 (160)
T ss_dssp THHHHHHHHHHHHHHH---------HHHHH-----HHSTTEEECTTSCEEEEEECCCCSBCCCT
T ss_pred cHHHHHHHHHHHHHHH---------HHHHh-----ccCCCCEECCCCCEEEEEECcccccCCCC
Confidence 3588888888777332 22111 113668888999999999999997 6864
No 2
>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}
Probab=89.56 E-value=0.1 Score=38.05 Aligned_cols=26 Identities=31% Similarity=0.569 Sum_probs=22.6
Q ss_pred CCCceecCCceeeeeeccccCCCCCC
Q 031814 125 SENYTKRDSGLIYRDFEVGKGNFPLY 150 (152)
Q Consensus 125 ~d~Yv~~dsGLIYkDf~~G~G~~Pk~ 150 (152)
.+|.++.+|||.|++.+.|+|+.|+.
T Consensus 99 ~~~v~~~~sGl~y~v~~~G~G~~p~~ 124 (210)
T d1q6ha_ 99 EKGVKTSSTGLVYQVVEAGKGEAPKD 124 (210)
T ss_dssp STTEEECTTSCEEEEEECCSSCCCCT
T ss_pred cCceEEccCceEEEEeeCCCCCCCCC
Confidence 45677889999999999999999975
No 3
>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}
Probab=84.43 E-value=0.29 Score=35.30 Aligned_cols=25 Identities=28% Similarity=0.340 Sum_probs=22.3
Q ss_pred CCCceecCCceeeeeeccccCCCCC
Q 031814 125 SENYTKRDSGLIYRDFEVGKGNFPL 149 (152)
Q Consensus 125 ~d~Yv~~dsGLIYkDf~~G~G~~Pk 149 (152)
.++.++.+|||-|+..+.|+|..|.
T Consensus 90 ~~~v~~~~sGl~y~v~~~G~G~~p~ 114 (204)
T d1fd9a_ 90 KPGVVVLPSGLQYKVINSGNGVKPG 114 (204)
T ss_dssp STTEEECTTSCEEEEEECCCSCCCC
T ss_pred CCceEEecCccEEEEeecCCCcccC
Confidence 4677888999999999999999886
No 4
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=58.09 E-value=3.6 Score=27.34 Aligned_cols=25 Identities=24% Similarity=0.291 Sum_probs=20.1
Q ss_pred hhhccceeEEecCCC-ceecCCceee
Q 031814 113 FIREGFEVKVVTSEN-YTKRDSGLIY 137 (152)
Q Consensus 113 FIREGfdVKVv~~d~-Yv~~dsGLIY 137 (152)
|-|+||+|.++++++ -++...|+-.
T Consensus 23 l~~ag~~v~~vs~~~~~V~~~~g~~i 48 (166)
T d1g2ia_ 23 LKEEGHEVYIASFERGTITGKHGYSV 48 (166)
T ss_dssp HHHTTCEEEEEESSSEEEECTTSCEE
T ss_pred HHHCCCEEEEEeCCCceEeecCCcEE
Confidence 568899999999877 5677888844
No 5
>d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.22 E-value=13 Score=25.02 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=17.9
Q ss_pred hccceeEEecCCC--ceecCCceee
Q 031814 115 REGFEVKVVTSEN--YTKRDSGLIY 137 (152)
Q Consensus 115 REGfdVKVv~~d~--Yv~~dsGLIY 137 (152)
|.||+|.|++.++ -++..+|+.+
T Consensus 26 ~ag~~v~~~s~~~~~~v~~~~g~~i 50 (186)
T d1p5fa_ 26 RAGIKVTVAGLAGKDPVQCSRDVVI 50 (186)
T ss_dssp HTTCEEEEEETTCSSCEECTTSCEE
T ss_pred HCCCEEEEEEecCCcceecCCCccc
Confidence 5699999998653 5788888854
No 6
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=31.63 E-value=16 Score=25.08 Aligned_cols=23 Identities=22% Similarity=0.252 Sum_probs=19.3
Q ss_pred ccceeEEecCCCc-eecCCceeee
Q 031814 116 EGFEVKVVTSENY-TKRDSGLIYR 138 (152)
Q Consensus 116 EGfdVKVv~~d~Y-v~~dsGLIYk 138 (152)
.||+|.++++||- |+..+|+.+.
T Consensus 28 ~g~~v~~vs~~~~~V~s~~G~~v~ 51 (188)
T d2fexa1 28 LGVEIVHATPDGMPVTSMGGLKVT 51 (188)
T ss_dssp SCCEEEEEETTSSCEECTTCCEEE
T ss_pred CCcEEEEEeCCCCcEEcCCCCEEe
Confidence 5999999999976 7888888764
No 7
>d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]}
Probab=28.38 E-value=16 Score=25.15 Aligned_cols=23 Identities=30% Similarity=0.673 Sum_probs=19.4
Q ss_pred chhhhccceeEEecCCCceecCC
Q 031814 111 PNFIREGFEVKVVTSENYTKRDS 133 (152)
Q Consensus 111 P~FIREGfdVKVv~~d~Yv~~ds 133 (152)
-.||..||.|+++.-+-|.+.|.
T Consensus 19 a~~vKsGF~V~i~GT~l~~vTD~ 41 (96)
T d2b59b2 19 APLVKAGFKVEIVGTELYAVTDA 41 (96)
T ss_dssp HHHHHSCCEEEETTSSCEEECCT
T ss_pred chhhhcCcEEEEEeeEeEEEecc
Confidence 35899999999999888877664
No 8
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}
Probab=27.30 E-value=17 Score=24.05 Aligned_cols=23 Identities=22% Similarity=0.198 Sum_probs=15.1
Q ss_pred ccccccCCCchhHHHHHHHhHhhhhh
Q 031814 78 ASGKTKSKNPYDEKRLLEQNKRMQKE 103 (152)
Q Consensus 78 s~~ktks~~pydEkrlL~~N~RIQ~~ 103 (152)
|+||+.+-||+-- +.-+++|..+
T Consensus 1 ~~~~~~~~~~~~~---~~~~~~~~~~ 23 (377)
T d1k8qa_ 1 AFGKLHPTNPEVT---MNISQMITYW 23 (377)
T ss_dssp CCCBSSCCCGGGG---CCHHHHHHHT
T ss_pred CCccCCCCCCCcC---CCHHHHHHHc
Confidence 5799999999732 2224556555
No 9
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=26.94 E-value=9.6 Score=26.59 Aligned_cols=16 Identities=31% Similarity=0.322 Sum_probs=13.1
Q ss_pred chhhhccceeEEecCC
Q 031814 111 PNFIREGFEVKVVTSE 126 (152)
Q Consensus 111 P~FIREGfdVKVv~~d 126 (152)
.++.+.|+||.||++.
T Consensus 27 ~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 27 EALASLGHEVLVFTPS 42 (437)
T ss_dssp HHHHHTTCEEEEEEEC
T ss_pred HHHHHcCCEEEEEecC
Confidence 4578999999999853
No 10
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.67 E-value=19 Score=25.43 Aligned_cols=16 Identities=31% Similarity=0.642 Sum_probs=13.7
Q ss_pred hhhhccceeEEecCCC
Q 031814 112 NFIREGFEVKVVTSEN 127 (152)
Q Consensus 112 ~FIREGfdVKVv~~d~ 127 (152)
-|.|.||||.++++.|
T Consensus 34 ~l~~aG~~V~~aS~~g 49 (221)
T d1u9ca_ 34 VFQEKGYDVKVASIQG 49 (221)
T ss_dssp HHHHTTCEEEEEESSC
T ss_pred HHHHCCCEEEEEecCC
Confidence 4789999999999764
Done!