Query 031816
Match_columns 152
No_of_seqs 167 out of 1122
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:51:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031816.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031816hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.4E-54 4.8E-59 314.4 18.9 150 1-150 1-150 (169)
2 2aak_A UBC1, ubiquitin conjuga 100.0 2.2E-54 7.6E-59 308.8 18.8 151 1-151 1-151 (152)
3 2ucz_A UBC7, ubiquitin conjuga 100.0 3.5E-54 1.2E-58 311.6 18.7 150 1-150 1-164 (165)
4 4gpr_A Ubiquitin-conjugating e 100.0 1.3E-53 4.6E-58 304.5 19.7 149 2-150 2-150 (151)
5 1zdn_A Ubiquitin-conjugating e 100.0 6.7E-54 2.3E-58 308.0 17.6 149 1-149 10-158 (158)
6 2c2v_B Ubiquitin-conjugating e 100.0 2.7E-54 9.2E-59 308.9 15.3 150 1-150 2-151 (154)
7 3h8k_A Ubiquitin-conjugating e 100.0 2.9E-53 9.8E-58 306.5 19.7 149 2-150 1-163 (164)
8 2e2c_A Ubiquitin conjugating e 100.0 3.7E-53 1.3E-57 303.7 18.0 150 1-151 6-155 (156)
9 2ayv_A Ubiquitin-conjugating e 100.0 6.5E-53 2.2E-57 304.8 19.3 148 2-149 19-166 (166)
10 1z2u_A Ubiquitin-conjugating e 100.0 5.1E-53 1.7E-57 301.2 18.4 149 2-150 2-150 (150)
11 2c4o_A Ubiquitin-conjugating e 100.0 1.4E-52 4.7E-57 303.0 20.0 149 2-150 17-165 (165)
12 2bep_A Ubiquitin-conjugating e 100.0 1.3E-52 4.6E-57 301.6 19.2 150 1-150 5-158 (159)
13 2gjd_A Ubiquitin-conjugating e 100.0 8E-53 2.7E-57 302.2 17.8 150 1-150 1-157 (157)
14 1yh2_A HSPC150 protein similar 100.0 2.8E-52 9.7E-57 302.5 19.8 149 2-150 2-154 (169)
15 2r0j_A Ubiquitin carrier prote 100.0 8.6E-53 3E-57 299.7 16.3 146 5-150 2-147 (149)
16 2grr_A Ubiquitin-conjugating e 100.0 1.9E-52 6.4E-57 301.3 17.6 151 1-151 4-161 (161)
17 3rcz_B SUMO-conjugating enzyme 100.0 2.3E-52 7.9E-57 301.1 18.0 148 2-149 8-162 (163)
18 1jat_A Ubiquitin-conjugating e 100.0 9.5E-53 3.3E-57 301.2 14.6 149 3-151 4-152 (155)
19 1i7k_A Ubiquitin-conjugating e 100.0 1.3E-52 4.6E-57 306.2 15.6 149 1-150 27-175 (179)
20 3k9o_A Ubiquitin-conjugating e 100.0 4.6E-52 1.6E-56 308.9 18.3 150 1-150 2-155 (201)
21 1fxt_A Ubiquitin-conjugating e 100.0 1.4E-52 4.8E-57 298.6 14.8 146 5-150 2-149 (149)
22 1yrv_A Ubiquitin-conjugating l 100.0 4.2E-52 1.5E-56 301.3 15.1 146 1-147 20-168 (169)
23 2pwq_A Ubiquitin conjugating e 100.0 9.6E-52 3.3E-56 309.3 17.2 149 2-150 21-170 (216)
24 3bzh_A Ubiquitin-conjugating e 100.0 3.4E-51 1.2E-55 302.2 19.6 147 3-149 47-193 (194)
25 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.9E-51 6.6E-56 303.1 17.5 147 4-150 32-192 (193)
26 3rz3_A Ubiquitin-conjugating e 100.0 3.4E-51 1.2E-55 300.2 17.9 151 1-151 3-174 (183)
27 1wzv_A Ubiquitin-conjugating e 100.0 3.2E-51 1.1E-55 293.4 17.2 149 2-151 2-152 (155)
28 3e46_A Ubiquitin-conjugating e 100.0 1.2E-50 4.3E-55 309.3 19.3 150 1-150 54-207 (253)
29 2y9m_A Ubiquitin-conjugating e 100.0 3.2E-50 1.1E-54 292.4 18.3 150 1-150 3-168 (172)
30 3fn1_B NEDD8-conjugating enzym 100.0 5.8E-50 2E-54 290.0 18.1 147 3-150 13-167 (167)
31 2awf_A Ubiquitin-conjugating e 100.0 1.5E-50 5.1E-55 294.1 14.4 143 2-144 15-172 (172)
32 1y8x_A Ubiquitin-conjugating e 100.0 4.6E-50 1.6E-54 288.5 16.7 144 3-149 5-149 (160)
33 1tte_A Ubiquitin-conjugating e 100.0 1.1E-50 3.7E-55 303.4 12.7 147 4-150 2-150 (215)
34 2nvu_C NEDD8-conjugating enzym 100.0 9.6E-50 3.3E-54 291.6 16.4 145 2-149 24-169 (180)
35 2onu_A Ubiquitin-conjugating e 100.0 3E-50 1E-54 287.3 10.9 144 4-150 2-147 (152)
36 2z5d_A Ubiquitin-conjugating e 100.0 7.6E-50 2.6E-54 291.4 12.7 146 1-150 20-169 (179)
37 1c4z_D UBCH7, ubiquitin conjug 100.0 1.4E-49 4.7E-54 284.5 11.1 145 5-150 3-149 (154)
38 1yf9_A Ubiquitin carrier prote 100.0 1.4E-48 4.8E-53 283.3 13.4 143 4-150 12-156 (171)
39 3o2u_A NEDD8-conjugating enzym 100.0 3.3E-48 1.1E-52 285.6 15.6 144 3-149 28-178 (190)
40 4ddg_A Ubiquitin-conjugating e 100.0 8.2E-48 2.8E-52 311.4 18.8 149 3-151 2-150 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 4.3E-48 1.5E-52 280.1 11.6 143 1-143 5-164 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 1.2E-44 4E-49 259.1 10.0 130 3-133 20-156 (156)
43 2fo3_A Ubiquitin-conjugating e 100.0 7.5E-44 2.6E-48 246.7 13.4 118 1-119 4-122 (125)
44 3ceg_A Baculoviral IAP repeat- 100.0 1.1E-43 3.6E-48 278.2 14.9 149 1-149 73-242 (323)
45 2a4d_A Ubiquitin-conjugating e 100.0 3.7E-43 1.3E-47 251.9 13.3 126 2-127 23-156 (160)
46 2h2y_A Ubiquitin-conjugating e 100.0 1.1E-42 3.9E-47 243.9 14.8 115 4-118 20-135 (136)
47 1jat_B Ubiquitin-conjugating e 100.0 3.6E-44 1.2E-48 252.2 6.6 129 1-130 2-138 (138)
48 2a7l_A Hypothetical ubiquitin- 100.0 2.6E-42 8.9E-47 241.8 12.5 113 1-114 20-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 2.3E-42 8E-47 250.2 8.9 125 3-127 34-166 (170)
50 1zuo_A Hypothetical protein LO 100.0 4.5E-42 1.5E-46 252.0 3.4 141 1-149 24-181 (186)
51 2f4w_A Ubiquitin-conjugating e 100.0 3E-39 1E-43 237.3 15.1 117 3-121 13-132 (187)
52 2z6o_A UFM1-conjugating enzyme 100.0 1.1E-30 3.8E-35 185.3 2.4 101 1-107 21-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 3.9E-21 1.3E-25 137.3 10.0 114 6-120 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 2.5E-21 8.7E-26 134.5 1.2 92 6-106 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 1.1E-15 3.8E-20 107.3 6.6 81 29-115 49-138 (146)
56 2ebm_A RWD domain-containing p 97.0 0.0054 1.8E-07 41.2 8.6 68 5-74 11-78 (128)
57 2day_A Ring finger protein 25; 96.4 0.032 1.1E-06 37.3 8.9 69 7-75 11-83 (128)
58 3zqs_A E3 ubiquitin-protein li 96.0 0.086 2.9E-06 37.9 9.9 83 7-113 4-86 (186)
59 2yz0_A Serine/threonine-protei 95.9 0.1 3.6E-06 35.2 9.8 68 6-74 12-85 (138)
60 2daw_A RWD domain containing p 95.7 0.2 7E-06 34.6 10.5 24 52-75 76-99 (154)
61 2ebk_A RWD domain-containing p 94.8 0.16 5.4E-06 33.9 7.5 66 8-74 11-79 (128)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 94.1 0.34 1.2E-05 32.5 8.0 68 6-74 12-86 (137)
63 2dax_A Protein C21ORF6; RWD do 93.6 0.19 6.3E-06 34.7 6.1 25 51-75 73-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 85.3 0.77 2.6E-05 21.3 2.3 21 4-24 5-25 (26)
65 2cwb_A Chimera of immunoglobul 73.4 0.69 2.4E-05 30.2 0.0 31 116-146 21-51 (108)
66 2fkn_A Urocanate hydratase; ro 68.0 7.8 0.00027 32.0 5.0 29 124-152 278-306 (552)
67 1x87_A Urocanase protein; stru 67.3 8.2 0.00028 31.8 5.0 29 124-152 277-305 (551)
68 1uwk_A Urocanate hydratase; hy 67.1 8.4 0.00029 31.8 5.0 29 124-152 282-310 (557)
69 2jrw_A Cyclic extended PEP.1; 37.7 14 0.00047 17.0 1.0 16 64-79 4-19 (26)
70 2bum_A Protocatechuate 3,4-dio 34.2 34 0.0012 24.7 3.2 26 48-73 108-138 (209)
71 3rls_A YAF9, protein AF-9 homo 34.0 1E+02 0.0035 21.6 5.6 47 30-78 29-75 (175)
72 2cu9_A Spcia1, histone chapero 32.4 88 0.003 21.6 4.9 38 32-69 36-86 (161)
73 3pft_A Flavin reductase; desul 31.9 25 0.00087 23.8 2.2 31 65-95 42-75 (157)
74 2f4m_B UV excision repair prot 30.9 53 0.0018 18.8 3.1 20 122-141 37-56 (61)
75 1pve_A HHR23B, UV excision rep 28.6 53 0.0018 19.5 2.9 22 121-142 38-59 (72)
76 1u9d_A Hypothetical protein VC 27.5 1.2E+02 0.004 19.9 4.8 29 5-33 32-60 (122)
77 1roc_A Anti-silencing protein 25.5 1.2E+02 0.0042 20.7 4.7 35 32-66 37-84 (155)
78 2rf4_B DNA-directed RNA polyme 24.7 39 0.0013 20.9 1.8 13 4-16 62-74 (87)
79 2ccv_A Helix pomatia agglutini 22.4 1.2E+02 0.0042 18.9 4.0 24 49-73 27-50 (101)
80 2ecu_A Flavin reductase (HPAC) 22.2 21 0.00073 23.9 0.3 31 65-95 40-73 (149)
81 2hue_A Anti-silencing protein 21.7 1.9E+02 0.0064 20.3 5.1 35 32-66 42-89 (175)
82 3g9r_A Fusion complex of HIV-1 21.7 77 0.0026 16.5 2.3 15 4-18 28-42 (42)
83 2idc_A Anti-silencing protein 21.3 1.6E+02 0.0056 20.6 4.7 34 32-65 38-84 (179)
84 2bum_B Protocatechuate 3,4-dio 20.9 48 0.0016 24.5 2.0 26 48-73 133-165 (241)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-54 Score=314.40 Aligned_cols=150 Identities=65% Similarity=1.211 Sum_probs=146.7
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
||+.|.+||++|+++|++++++|+++.+.++|+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|+|||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 89899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||++++++++
T Consensus 81 I~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 81 VYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp BCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 2
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.2e-54 Score=308.83 Aligned_cols=151 Identities=96% Similarity=1.543 Sum_probs=147.7
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
||+.|.+||++|++++++++++|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031816 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 81 v~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 151 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||++++++++.
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp BCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999864
No 3
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-54 Score=311.57 Aligned_cols=150 Identities=41% Similarity=0.857 Sum_probs=145.3
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecC-CCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHP 79 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hp 79 (152)
||+.|.+||++|+++|++++++|+++.+.+ +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 899999999999999999999999999965 7999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEeecCc-------------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH
Q 031816 80 NIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 146 (152)
Q Consensus 80 nv~~~G~vcl~~l-------------~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~ 146 (152)
||+.+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||++++
T Consensus 81 Nv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~ 160 (165)
T 2ucz_A 81 NIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSIL 160 (165)
T ss_dssp TBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9999999999999 688999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 031816 147 QSWT 150 (152)
Q Consensus 147 ~~~~ 150 (152)
+|++
T Consensus 161 ~~~~ 164 (165)
T 2ucz_A 161 KSLG 164 (165)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9986
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.3e-53 Score=304.46 Aligned_cols=149 Identities=42% Similarity=0.838 Sum_probs=145.5
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 81 (152)
++.|.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++++.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 82 NKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999874
No 5
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.7e-54 Score=308.04 Aligned_cols=149 Identities=34% Similarity=0.698 Sum_probs=145.9
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
||..+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 10 ~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 89 (158)
T 1zdn_A 10 LPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPN 89 (158)
T ss_dssp SCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031816 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 81 v~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 149 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 90 v~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 90 VGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp BCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999875
No 6
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-54 Score=308.92 Aligned_cols=150 Identities=37% Similarity=0.732 Sum_probs=144.8
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
||..+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 82 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 82 VDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp BCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875
No 7
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.9e-53 Score=306.53 Aligned_cols=149 Identities=42% Similarity=0.853 Sum_probs=144.5
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCC-CcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
|+.|.+||++|++++++++++|+++.+.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 a~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 1 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 467899999999999999999999999765 9999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
Q 031816 81 IYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 147 (152)
Q Consensus 81 v~~~G~vcl~~l~-------------~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~ 147 (152)
|+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+++++
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 160 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 160 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999997 789999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 031816 148 SWT 150 (152)
Q Consensus 148 ~~~ 150 (152)
|++
T Consensus 161 s~~ 163 (164)
T 3h8k_A 161 SLG 163 (164)
T ss_dssp HHT
T ss_pred hhc
Confidence 986
No 8
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-53 Score=303.67 Aligned_cols=150 Identities=40% Similarity=0.750 Sum_probs=145.3
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
|++.+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 85 (156)
T 2e2c_A 6 ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPN 85 (156)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031816 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 81 v~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 151 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|+++||+++++++.+
T Consensus 86 v~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 86 VDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred CccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999 89999999999999998764
No 9
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-53 Score=304.84 Aligned_cols=148 Identities=41% Similarity=0.862 Sum_probs=144.1
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 81 (152)
++.+.+||++|++++++++++|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 19 FQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031816 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 82 ~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 149 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++
T Consensus 99 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 99 NSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999874
No 10
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=5.1e-53 Score=301.18 Aligned_cols=149 Identities=45% Similarity=0.899 Sum_probs=144.9
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 81 (152)
|..+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999863
No 11
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.4e-52 Score=302.96 Aligned_cols=149 Identities=46% Similarity=0.918 Sum_probs=144.9
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 81 (152)
.+.+.+||++|++++++++++|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV 96 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 96 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++.
T Consensus 97 ~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 97 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999998763
No 12
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.3e-52 Score=301.59 Aligned_cols=150 Identities=33% Similarity=0.653 Sum_probs=145.3
Q ss_pred CChHHHHHHHHHHHHHhcC---CCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCc
Q 031816 1 MSTPARKRLMRDFKRLQQD---PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~---~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~ 77 (152)
||+.+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 7788999999999999985 5789999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 78 Hpnv~-~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++++++
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999 69999999999999999999999999999999999999999999999999999999999999999875
No 13
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=8e-53 Score=302.15 Aligned_cols=150 Identities=39% Similarity=0.761 Sum_probs=143.2
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEecc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQD-----NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~ 75 (152)
||+.|.+||++|++++++++++|+++.|.+ +|+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 888999999999999999999999999864 489999999999999999999999999999999999999999999
Q ss_pred CccccccCCCcEeecCcCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 76 MFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 76 i~Hpnv~~~G~vcl~~l~~--~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+|||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||++++++++
T Consensus 81 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999987 79999999999999999999999999999999999999999999999999999863
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-52 Score=302.50 Aligned_cols=149 Identities=36% Similarity=0.702 Sum_probs=145.4
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 81 (152)
|+.+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEeecCcC----CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 82 YADGSICLDILQ----NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~vcl~~l~----~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++.
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 999999999998 899999999999999999999999999999999999999999999999999999875
No 15
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=8.6e-53 Score=299.66 Aligned_cols=146 Identities=39% Similarity=0.785 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccccCC
Q 031816 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~~ 84 (152)
+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 85 G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++.
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999875
No 16
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.9e-52 Score=301.35 Aligned_cols=151 Identities=40% Similarity=0.805 Sum_probs=145.1
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEecc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQD-----NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~ 75 (152)
|++.+.+||++|++++++++++|+++.+.. +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 888899999999999999999999998853 689999999999999999999999999999999999999999999
Q ss_pred CccccccCCCcEeecCcCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031816 76 MFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 76 i~Hpnv~~~G~vcl~~l~~--~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 151 (152)
+|||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++++
T Consensus 84 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 84 LFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred cccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999986 899999999999999999999999999999999999999999999999999998763
No 17
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-52 Score=301.14 Aligned_cols=148 Identities=41% Similarity=0.820 Sum_probs=142.6
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCC-----CcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccC
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM 76 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~~-----~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i 76 (152)
|..|.+||++|++++++++++|+++.|.++ |+++|+++|.||+||||+||.|++.|.||++||++||+|+|.|+|
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 467999999999999999999999999765 999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcEeecCcCCC--CCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031816 77 FHPNIYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 77 ~Hpnv~~~G~vcl~~l~~~--W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 149 (152)
|||||+.+|.||+++|... |+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999765 999999999999999999999999999999999999999999999999999976
No 18
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=9.5e-53 Score=301.22 Aligned_cols=149 Identities=36% Similarity=0.748 Sum_probs=144.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccccc
Q 031816 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 82 (152)
+.+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031816 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 83 ~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 151 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++..
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 84 RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999998753
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-52 Score=306.18 Aligned_cols=149 Identities=38% Similarity=0.705 Sum_probs=143.1
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
|++.+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 106 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPN 106 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCc
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++| +|+++|.++|+++++++.+
T Consensus 107 V~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~ 175 (179)
T 1i7k_A 107 VDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVT 175 (179)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC
T ss_pred cccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999 9999999999999999865
No 20
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=4.6e-52 Score=308.93 Aligned_cols=150 Identities=33% Similarity=0.653 Sum_probs=144.0
Q ss_pred CChHHHHHHHHHHHHHhcC---CCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCc
Q 031816 1 MSTPARKRLMRDFKRLQQD---PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~---~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~ 77 (152)
||+.|.+||++|+++++++ ++.|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 8889999999999999987 3689999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 78 Hpnv~-~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 155 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 155 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999 69999999999999999999999999999999999999999999999999999999999999999875
No 21
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.4e-52 Score=298.60 Aligned_cols=146 Identities=33% Similarity=0.702 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCC-CcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccccC
Q 031816 5 ARKRLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA 83 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~g~~~~~~~~-~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~ 83 (152)
+.+||++|++++++++++|+++.+.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 569999999999999999999999877 9999999999999999999999999999999999999999999999999997
Q ss_pred -CCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 84 -DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 84 -~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999863
No 22
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.2e-52 Score=301.26 Aligned_cols=146 Identities=33% Similarity=0.662 Sum_probs=141.6
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
|++.|.+||++|+++|++++++|+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCCCcEeecCcC--CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
Q 031816 81 I-YADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 147 (152)
Q Consensus 81 v-~~~G~vcl~~l~--~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~ 147 (152)
| +.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++ |++|++
T Consensus 100 I~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp BCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9 799999999998 89999999999999999999999999999999999999999999999 988875
No 23
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=9.6e-52 Score=309.34 Aligned_cols=149 Identities=36% Similarity=0.753 Sum_probs=145.1
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 81 (152)
++.+.+||++|+++|++++++|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 100 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNI 100 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 82 Y-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~-~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 101 ~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 101 SSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp CTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred cCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9 69999999999999999999999999999999999999999999999999999999999999999875
No 24
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=3.4e-51 Score=302.17 Aligned_cols=147 Identities=37% Similarity=0.736 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccccc
Q 031816 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 82 (152)
+.+.+||++|+++|++++++|+++.+.++|+++|+++|.||+||||+||.|+|.|.||++||++||+|+|.|+||||||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031816 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 83 ~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 149 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 127 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya 193 (194)
T 3bzh_A 127 SQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 193 (194)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999886
No 25
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-51 Score=303.13 Aligned_cols=147 Identities=36% Similarity=0.719 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHHHhcCCC-------------CCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCee
Q 031816 4 PARKRLMRDFKRLQQDPP-------------AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTV 70 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~-------------~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v 70 (152)
.+.+||++|+++|+++++ .|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 478999999999999887 7999999999999999999999999999999999999999999999999
Q ss_pred eEeccCcccccc-CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031816 71 RFVSRMFHPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 71 ~f~t~i~Hpnv~-~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 149 (152)
+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 999999999999 6999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred h
Q 031816 150 T 150 (152)
Q Consensus 150 ~ 150 (152)
+
T Consensus 192 ~ 192 (193)
T 2f4z_A 192 K 192 (193)
T ss_dssp C
T ss_pred c
Confidence 5
No 26
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=3.4e-51 Score=300.18 Aligned_cols=151 Identities=39% Similarity=0.787 Sum_probs=143.1
Q ss_pred CC-hHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcc
Q 031816 1 MS-TPARKRLMRDFKRLQQDPPAGISGA-PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 1 Ms-~~a~~RL~~E~~~l~~~~~~g~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 78 (152)
|+ +.|.+||++|++++++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 44 4789999999999999999999999 678899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcEeecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH------CHHHHHH
Q 031816 79 PNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE------NKREYNR 139 (152)
Q Consensus 79 pnv~~~G~vcl~~l~-------------~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~------~~~~f~~ 139 (152)
|||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.|||.+|++ |+++|++
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~ 162 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTD 162 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHH
Confidence 999999999999996 789999999999999999999999999999999999998 7899999
Q ss_pred HHHHHHHHhhhc
Q 031816 140 RVREIVEQSWTA 151 (152)
Q Consensus 140 ~~r~~~~~~~~~ 151 (152)
+||++|++|+++
T Consensus 163 ~v~~~v~~s~~~ 174 (183)
T 3rz3_A 163 IIRKQVLGTKVD 174 (183)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=3.2e-51 Score=293.36 Aligned_cols=149 Identities=28% Similarity=0.676 Sum_probs=142.3
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEE-eecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISG-APQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~-~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
|..+.+||++|++++++++++|+++ .+.++|+++|+++|. |+||||+||.|++.|.||++||++||+|+|.|++||||
T Consensus 2 ~m~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (155)
T 1wzv_A 2 SHMASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPN 80 (155)
T ss_dssp ---CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cchHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCc
Confidence 4458899999999999999999999 788999999999999 99999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCc-CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031816 81 IYADGSICLDIL-QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 81 v~~~G~vcl~~l-~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 151 (152)
|+.+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++..
T Consensus 81 V~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 81 VDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp BCTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999 89999999999999999999999999999999999999999999999999999998753
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.2e-50 Score=309.35 Aligned_cols=150 Identities=33% Similarity=0.653 Sum_probs=145.5
Q ss_pred CChHHHHHHHHHHHHHhcC---CCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCc
Q 031816 1 MSTPARKRLMRDFKRLQQD---PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~---~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~ 77 (152)
||+.|.+||++||++|+++ ++.||++.+.++|++.|+++|.||++|||+||.|++.|.||++||++||+|+|.|+||
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 7888999999999999987 4789999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 78 Hpnv~-~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 134 HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~ 207 (253)
T 3e46_A 134 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 207 (253)
T ss_dssp BTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_pred cCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999 69999999999999999999999999999999999999999999999999999999999999999875
No 29
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=3.2e-50 Score=292.41 Aligned_cols=150 Identities=26% Similarity=0.611 Sum_probs=140.9
Q ss_pred CChHHHHHHHHHHHHHhc-C-C------CC---CeEEee-cCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCC
Q 031816 1 MSTPARKRLMRDFKRLQQ-D-P------PA---GISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPP 68 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~-~-~------~~---g~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP 68 (152)
||+.+.+||++|++++++ + + +. |+.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 888899999999999998 5 3 33 467788 7889999999999999999999999999999999999999
Q ss_pred eeeEec-cCcccccc-CCCcEeecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH-CHHHHHHHHHHH
Q 031816 69 TVRFVS-RMFHPNIY-ADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE-NKREYNRRVREI 144 (152)
Q Consensus 69 ~v~f~t-~i~Hpnv~-~~G~vcl~~l~-~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~-~~~~f~~~~r~~ 144 (152)
+|+|.| +||||||+ .+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++ |+++|.++||++
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~ 162 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYF 162 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999 99999996 89999999998 899999999999999999999999999999999999999 999999999999
Q ss_pred HHHhhh
Q 031816 145 VEQSWT 150 (152)
Q Consensus 145 ~~~~~~ 150 (152)
++++..
T Consensus 163 ~~~~~~ 168 (172)
T 2y9m_A 163 LAERER 168 (172)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998864
No 30
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=5.8e-50 Score=289.96 Aligned_cols=147 Identities=24% Similarity=0.529 Sum_probs=140.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEee-cCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccc
Q 031816 3 TPARKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 81 (152)
+.+.+||++|++++++++++|+++.+ .++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 46889999999999999999999986 467899999998 9999999999999999999999999999999999999999
Q ss_pred cCCCcEeecCcCC------CCCCcCCHHHHHHHHHHhhcC-CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 82 YADGSICLDILQN------QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~vcl~~l~~------~W~p~~~i~~il~~l~~ll~~-p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+.+|.||+++|.. +|+|+++|.+||.+|+++|.+ |++++|+|.|||++|++|+++|.++||++++++++
T Consensus 92 ~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 92 TETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999975 799999999999999999999 69999999999999999999999999999999864
No 31
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.5e-50 Score=294.06 Aligned_cols=143 Identities=38% Similarity=0.808 Sum_probs=110.4
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecC-CCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
++.+.+||++|+++|++++++|+++.+.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 35789999999999999999999999865 79999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHH-HHHHHHHHH
Q 031816 81 IYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREI 144 (152)
Q Consensus 81 v~~~G~vcl~~l~-------------~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~-~f~~~~r~~ 144 (152)
|+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|++ +|+++||++
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999999996 689999999999999999999999999999999999999999 999999975
No 32
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.6e-50 Score=288.53 Aligned_cols=144 Identities=28% Similarity=0.679 Sum_probs=138.4
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccc
Q 031816 3 TPARKRLMRDFKRLQQDPPAGISGA-PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 81 (152)
+.+.+||++|++++ ++++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 46889999999999 578899998 7889999999988 9999999999999999999999999999999999999999
Q ss_pred cCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031816 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 82 ~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 149 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||++++.++
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~~ 149 (160)
T 1y8x_A 82 DLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGY 149 (160)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSEE
T ss_pred CCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998764
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.1e-50 Score=303.44 Aligned_cols=147 Identities=33% Similarity=0.695 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCC-cceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccccc
Q 031816 4 PARKRLMRDFKRLQQDPPAGISGAPQDNN-IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~g~~~~~~~~~-~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 82 (152)
.+.+||++|++++++++++|+++.+.++| ++.|+++|.||+||||+||.|++.|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999997764 56999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 83 A-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~-~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
. +|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|+++++.
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~ 150 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 150 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 7 9999999999999999999999999999999999999999999999999999999999999999875
No 34
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.6e-50 Score=291.56 Aligned_cols=145 Identities=28% Similarity=0.652 Sum_probs=139.4
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccc
Q 031816 2 STPARKRLMRDFKRLQQDPPAGISGA-PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 80 (152)
++.+.+||++|++++ ++++|+++. +.++|+++|+++| ||++|||+||.|++.|.||++||++||+|+|.|+|||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 457899999999999 578899998 7889999999998 999999999999999999999999999999999999999
Q ss_pred ccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031816 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 81 v~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 149 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||++++.++
T Consensus 101 V~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~~ 169 (180)
T 2nvu_C 101 IDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGY 169 (180)
T ss_dssp BCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSEE
T ss_pred CCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999765
No 35
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=3e-50 Score=287.29 Aligned_cols=144 Identities=30% Similarity=0.681 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccccc-
Q 031816 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY- 82 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~- 82 (152)
+|.+||++|++++++. |+++.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 4679999999999874 789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeecCcCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 83 ADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~~G~vcl~~l~~~W~p~~~i~~il~~-l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
.+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+++++++.
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~ 147 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYAS 147 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 59999999999999999999999999 689999999999999999999999999999999999999875
No 36
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.6e-50 Score=291.37 Aligned_cols=146 Identities=32% Similarity=0.729 Sum_probs=137.1
Q ss_pred CCh--HHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcc
Q 031816 1 MST--PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 1 Ms~--~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 78 (152)
||+ .|.+||++|+++++. +|+++.+. +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~H 95 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFH 95 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCcc
Confidence 554 489999999999985 58888887 678999999999999999999999999999999999999999999999
Q ss_pred ccccC-CCcEeecCcCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 79 PNIYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 79 pnv~~-~G~vcl~~l~~~W~p~~~i~~il~~-l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
|||+. +|.||+++|.++|+|+++|.+||.+ |+++|.+|++++|+|.+||++|++|+++|.++||+++++++.
T Consensus 96 PNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 96 PNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99997 9999999999999999999999999 999999999999999999999999999999999999999875
No 37
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.4e-49 Score=284.55 Aligned_cols=145 Identities=26% Similarity=0.721 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEee-cCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccccC
Q 031816 5 ARKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA 83 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~g~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~ 83 (152)
|.+||++|++++++++++|+++.+ .++|+++|+++|. |+||||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 679999999999999999998655 6789999999997 99999999999999999999999999999999999999999
Q ss_pred CCcEeecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 84 DGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 84 ~G~vcl~~l~-~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+++++++.
T Consensus 82 ~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (154)
T 1c4z_D 82 KGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149 (154)
T ss_dssp TCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC--
T ss_pred CCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 9999999996 899999999999999999999999999999999999999999999999999998875
No 38
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-48 Score=283.30 Aligned_cols=143 Identities=31% Similarity=0.651 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccccc-
Q 031816 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY- 82 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~- 82 (152)
.+.+||++|++++++++. ++ +.++|++.|+++|.||+||||+||.|++.|.||++||++||+|+|.|+||||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 578999999999999874 43 3578999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeecCcCCCCCCcCCHHHHHHHH-HHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031816 83 ADGSICLDILQNQWSPIYDVAAILTSI-QSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~~G~vcl~~l~~~W~p~~~i~~il~~l-~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 150 (152)
.+|.||+++|.++|+|+++|.+||.+| +++|.+|++++|+|.+||.+|++|+++|.++||+++++++.
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 599999999999999999999999997 79999999999999999999999999999999999999864
No 39
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=3.3e-48 Score=285.59 Aligned_cols=144 Identities=34% Similarity=0.687 Sum_probs=138.0
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEe----ecCCCcc---eeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEecc
Q 031816 3 TPARKRLMRDFKRLQQDPPAGISGA----PQDNNIM---LWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g~~~~----~~~~~~~---~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~ 75 (152)
+.|.+||++|+++++ +++|+++. +.++|++ +|+++|. |++|||+||.|++.|.||++||++||+|+|.|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 568999999999998 77899998 8899999 9999995 888999999999999999999999999999999
Q ss_pred CccccccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031816 76 MFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 76 i~Hpnv~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 149 (152)
+|||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||++++.+.
T Consensus 105 i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred cccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997654
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=8.2e-48 Score=311.42 Aligned_cols=149 Identities=45% Similarity=0.890 Sum_probs=145.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccccc
Q 031816 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 82 (152)
+.|.+||++|++++++++++|+++.|.++|++.|+++|.||+||||+||.|++.|.||++||++||+|+|.|++|||||+
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031816 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 83 ~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 151 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++..
T Consensus 82 ~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 82 SNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp TTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999998753
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=4.3e-48 Score=280.10 Aligned_cols=143 Identities=25% Similarity=0.575 Sum_probs=135.3
Q ss_pred CChHHHHHHHHHHHHHhcCC------------CCCeEEeecCCCcceeEEEEECCCCCCCC--CcEEEEEEEecCCCCCC
Q 031816 1 MSTPARKRLMRDFKRLQQDP------------PAGISGAPQDNNIMLWNAVIFGPDDTPWD--GGTFKLTLQFTEDYPNK 66 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~------------~~g~~~~~~~~~~~~w~~~i~gp~~t~y~--gg~f~~~i~~p~~yP~~ 66 (152)
||+.+.+||++|++++++++ +.|+++.+.++|+++|+++|.||+||||+ ||.|++.|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 88889999999999999987 77999999999999999999999999999 99999999999999999
Q ss_pred CCeeeEeccCccccccCCCcEeecCcCCCCCCcCCHHHHH-HHHHHhhcC--CCCCCCCCHHHHHHHHHCHHHHHHHHHH
Q 031816 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCD--PNPNSPANSEAARMFSENKREYNRRVRE 143 (152)
Q Consensus 67 pP~v~f~t~i~Hpnv~~~G~vcl~~l~~~W~p~~~i~~il-~~l~~ll~~--p~~~~p~n~~a~~~~~~~~~~f~~~~r~ 143 (152)
||+|+|.|++|||||+.+|.||+++|.++|+|++++.++| ..|++++.+ |++++|+|.|||++|++|+++|+++||+
T Consensus 85 pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp CCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred CCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 9999999999999999999999999999999999999975 457777774 8999999999999999999999999984
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.2e-44 Score=259.06 Aligned_cols=130 Identities=25% Similarity=0.517 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHHhcC-CCCCeEEeecC-C--CcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcc
Q 031816 3 TPARKRLMRDFKRLQQD-PPAGISGAPQD-N--NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~-~~~g~~~~~~~-~--~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 78 (152)
..+.+||++|+++++++ +++|+++.+.+ + |++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 99 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEM 99 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccccc
Confidence 46789999999999998 78899998843 3 59999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcE---eecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHC
Q 031816 79 PNIYADGSI---CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSEN 133 (152)
Q Consensus 79 pnv~~~G~v---cl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~ 133 (152)
|||+.+|.| |+++|. +|+|+++|.+||.+|+++|.+|++++|+|++||.+|++|
T Consensus 100 PNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 100 SCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp TTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 999999999 888887 599999999999999999999999999999999998775
No 43
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=7.5e-44 Score=246.67 Aligned_cols=118 Identities=29% Similarity=0.633 Sum_probs=106.5
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccC-ccc
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHP 79 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i-~Hp 79 (152)
|+ .|.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++ |||
T Consensus 4 m~-~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 82 (125)
T 2fo3_A 4 MG-NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHT 82 (125)
T ss_dssp ------CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBT
T ss_pred ch-HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCC
Confidence 54 4789999999999999999999999999999999999999999999999999999999999999999999996 999
Q ss_pred cccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCC
Q 031816 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119 (152)
Q Consensus 80 nv~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~ 119 (152)
||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|+.+
T Consensus 83 nv~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 83 HVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred cCCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999999999999999875
No 44
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=278.23 Aligned_cols=149 Identities=30% Similarity=0.596 Sum_probs=138.7
Q ss_pred CChHHHHHHHHHHHHHhcCCCCC----eEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEecc-
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAG----ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR- 75 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g----~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~- 75 (152)
||+.+.+||++|+++|++++++| +.+.+.++|++.|+++|.||+||||+||.|+|.|.||++||++||+|+|.|+
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~ 152 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTG 152 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCST
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccC
Confidence 67789999999999999988774 4577789999999999999999999999999999999999999999999998
Q ss_pred ----CccccccCCCcEeecCcC-------CCCCCcC-CHHHHHHHHHHhhc--CCCCCCCCCHHH--HHHHHHCHHHHHH
Q 031816 76 ----MFHPNIYADGSICLDILQ-------NQWSPIY-DVAAILTSIQSLLC--DPNPNSPANSEA--ARMFSENKREYNR 139 (152)
Q Consensus 76 ----i~Hpnv~~~G~vcl~~l~-------~~W~p~~-~i~~il~~l~~ll~--~p~~~~p~n~~a--~~~~~~~~~~f~~ 139 (152)
||||||+.+|.||+++|. ++|+|++ +|.+||.+|+++|. +|++++|+|.++ +.+|.+|+++|.+
T Consensus 153 g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~ 232 (323)
T 3ceg_A 153 GHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDG 232 (323)
T ss_dssp TTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHH
T ss_pred CCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHH
Confidence 999999999999999997 6899999 89999999999996 677799999987 6799999999999
Q ss_pred HHHHHHHHhh
Q 031816 140 RVREIVEQSW 149 (152)
Q Consensus 140 ~~r~~~~~~~ 149 (152)
+||+++.+++
T Consensus 233 ~vr~~t~k~A 242 (323)
T 3ceg_A 233 NIRQATVKWA 242 (323)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 45
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=3.7e-43 Score=251.90 Aligned_cols=126 Identities=23% Similarity=0.522 Sum_probs=117.7
Q ss_pred ChHHHHHHHHHHHHHhcCCCCC-eEEee-cCCC--cceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCc
Q 031816 2 STPARKRLMRDFKRLQQDPPAG-ISGAP-QDNN--IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g-~~~~~-~~~~--~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~ 77 (152)
...+.+||++|++++++++++| +++.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 23 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 102 (160)
T 2a4d_A 23 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 102 (160)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred echHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCce
Confidence 3568899999999999999888 77877 4454 899999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCcEeecCcC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCCCHHHH
Q 031816 78 HPNIY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPNSPANSEAA 127 (152)
Q Consensus 78 Hpnv~-~~G~vcl~~l~--~~W~p~~~i~~il~~l~~ll~-~p~~~~p~n~~a~ 127 (152)
||||+ .+|.||+++|. ++|+|+++|++||.+|+++|. +|++++|+|.|||
T Consensus 103 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 103 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp CTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred eCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 99999 79999999998 899999999999999999995 7999999999987
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-42 Score=243.86 Aligned_cols=115 Identities=26% Similarity=0.621 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccC-cccccc
Q 031816 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIY 82 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i-~Hpnv~ 82 (152)
.|.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++ |||||+
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 99 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVY 99 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999996 999999
Q ss_pred CCCcEeecCcCCCCCCcCCHHHHHHHHHHhhcCCCC
Q 031816 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118 (152)
Q Consensus 83 ~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~~p~~ 118 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|+.
T Consensus 100 ~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 100 SNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 999999999999999999999999999999999875
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=3.6e-44 Score=252.16 Aligned_cols=129 Identities=22% Similarity=0.547 Sum_probs=115.9
Q ss_pred CCh-HHHHHHHHHHHHHhcC-CCCCeEEeecC-C--CcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEecc
Q 031816 1 MST-PARKRLMRDFKRLQQD-PPAGISGAPQD-N--NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~-~a~~RL~~E~~~l~~~-~~~g~~~~~~~-~--~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~ 75 (152)
||+ .+.+||++|+++++++ ++.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 774 5679999999999998 78899998843 3 48999999999999999999999999999999999999999999
Q ss_pred CccccccCC-CcE--eecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 031816 76 MFHPNIYAD-GSI--CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 130 (152)
Q Consensus 76 i~Hpnv~~~-G~v--cl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~ 130 (152)
||||||+.+ |.| |++++. +|+|+++|.+||.+|+++|.+|++++|+|++|+.+|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999975 999 899886 899999999999999999999999999999988654
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-42 Score=241.78 Aligned_cols=113 Identities=36% Similarity=0.723 Sum_probs=107.5
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEe--ecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCc-
Q 031816 1 MSTPARKRLMRDFKRLQQDPPAGISGA--PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF- 77 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g~~~~--~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~- 77 (152)
||+.+ +||++|++++++++++|+++. +.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~-~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~ 98 (136)
T 2a7l_A 20 MASMQ-KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIP 98 (136)
T ss_dssp GTTSC-HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCC
T ss_pred ccHHH-HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcC
Confidence 66544 999999999999999999965 78899999999999999999999999999999999999999999999999
Q ss_pred -cccccCCCcEeecCcCCCCCCcCCHHHHHHHHHHhhc
Q 031816 78 -HPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 114 (152)
Q Consensus 78 -Hpnv~~~G~vcl~~l~~~W~p~~~i~~il~~l~~ll~ 114 (152)
||||+.+|.||+++|.++|+|+++|++||.+|+++|.
T Consensus 99 ~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 99 VHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999874
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=250.18 Aligned_cols=125 Identities=23% Similarity=0.526 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCC-eEEee-cCCC--cceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcc
Q 031816 3 TPARKRLMRDFKRLQQDPPAG-ISGAP-QDNN--IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g-~~~~~-~~~~--~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 78 (152)
..+.+||++|++++++++++| +++.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 357899999999999999888 67776 4554 8999999999999999999999999999999999999999999999
Q ss_pred cccc-CCCcEeecCcC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCCCHHHH
Q 031816 79 PNIY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPNSPANSEAA 127 (152)
Q Consensus 79 pnv~-~~G~vcl~~l~--~~W~p~~~i~~il~~l~~ll~-~p~~~~p~n~~a~ 127 (152)
|||+ .+|.||+++|. ++|+|+++|++||.+|+++|. +|++++|+|.|||
T Consensus 114 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 9999 89999999998 899999999999999999997 5999999999987
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=4.5e-42 Score=252.01 Aligned_cols=141 Identities=22% Similarity=0.451 Sum_probs=127.9
Q ss_pred CChHHHHHHHHHHHHHhcCC---CCCeEEeecCCCcceeEEEEECC-CCCCCCC-----------cEEEEEEEecCCCCC
Q 031816 1 MSTPARKRLMRDFKRLQQDP---PAGISGAPQDNNIMLWNAVIFGP-DDTPWDG-----------GTFKLTLQFTEDYPN 65 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~---~~g~~~~~~~~~~~~w~~~i~gp-~~t~y~g-----------g~f~~~i~~p~~yP~ 65 (152)
||+.|.+||++|+++|++++ +.|+++.+.++|++.|+++|.|| ++|||+| |.|+++|.||++||+
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~ 103 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPF 103 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCC
Confidence 77889999999999999988 68899999999999999999998 9999998 899999999999999
Q ss_pred CCCeeeEeccCccc-cccCCCcEeecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHH
Q 031816 66 KPPTVRFVSRMFHP-NIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143 (152)
Q Consensus 66 ~pP~v~f~t~i~Hp-nv~~~G~vcl~~l~-~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~ 143 (152)
+||+|+|.|++||| ||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++.. .|..++.+|.+.+++
T Consensus 104 ~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~ 175 (186)
T 1zuo_A 104 DPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQ 175 (186)
T ss_dssp SCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHH
T ss_pred CCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHH
Confidence 99999999999999 69999999999997 789999999999999999999986542 344567778888888
Q ss_pred HHHHhh
Q 031816 144 IVEQSW 149 (152)
Q Consensus 144 ~~~~~~ 149 (152)
++.++.
T Consensus 176 ~~~~~~ 181 (186)
T 1zuo_A 176 QSYNSI 181 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777765
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-39 Score=237.26 Aligned_cols=117 Identities=32% Similarity=0.708 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcccccc
Q 031816 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 82 (152)
+.+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ ||||+
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~ 90 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFK 90 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceec
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CCCcEeecCc---CCCCCCcCCHHHHHHHHHHhhcCCCCCCC
Q 031816 83 ADGSICLDIL---QNQWSPIYDVAAILTSIQSLLCDPNPNSP 121 (152)
Q Consensus 83 ~~G~vcl~~l---~~~W~p~~~i~~il~~l~~ll~~p~~~~p 121 (152)
.+|.||+++| .++|+|+++|.+||.+|+++|.+|+++..
T Consensus 91 ~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 91 CNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp TTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred cCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 9999999999 68999999999999999999999988643
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.96 E-value=1.1e-30 Score=185.33 Aligned_cols=101 Identities=21% Similarity=0.382 Sum_probs=93.1
Q ss_pred CChHH--------HHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCc----------EEEEEEEecCC
Q 031816 1 MSTPA--------RKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG----------TFKLTLQFTED 62 (152)
Q Consensus 1 Ms~~a--------~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~~p~~ 62 (152)
||+.| .+||++|++.|++ ++.+..+|+..|.+.+.||+||+|+|| .|++++.||++
T Consensus 21 m~t~a~p~~~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~ 94 (172)
T 2z6o_A 21 LKTNAGPRDRELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPIT 94 (172)
T ss_dssp CCCCCCTTCTHHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTT
T ss_pred cccccCCCccHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCC
Confidence 66667 9999999999998 577888899999999999999999999 99999999999
Q ss_pred CCCCCCeeeEecc-CccccccCCCcEeecCcCC----CCCCcCCHHHHHH
Q 031816 63 YPNKPPTVRFVSR-MFHPNIYADGSICLDILQN----QWSPIYDVAAILT 107 (152)
Q Consensus 63 yP~~pP~v~f~t~-i~Hpnv~~~G~vcl~~l~~----~W~p~~~i~~il~ 107 (152)
||.+||+|+|.+. +|||||+.+|+||+++|.. .|+|.++|.++|.
T Consensus 95 YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 95 YPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 9999999999998 9999999999999999943 4559999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.85 E-value=3.9e-21 Score=137.30 Aligned_cols=114 Identities=21% Similarity=0.329 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHhcCCCC---CeEEeecCCCcceeEEEEECCCCCCCCCcE---EEEEEEecCCCCCCCCeeeEec-----
Q 031816 6 RKRLMRDFKRLQQDPPA---GISGAPQDNNIMLWNAVIFGPDDTPWDGGT---FKLTLQFTEDYPNKPPTVRFVS----- 74 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~---g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~---f~~~i~~p~~yP~~pP~v~f~t----- 74 (152)
.+|..+|..++.+.-+. ...+...++....+-+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.+
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 36677788777653321 222334566666777777777779999999 8899999999999999998865
Q ss_pred --c---Cc-cccccCCCcEeecCcCCCCCC-cCCHHHHHHHHHHhhcCCCCCC
Q 031816 75 --R---MF-HPNIYADGSICLDILQNQWSP-IYDVAAILTSIQSLLCDPNPNS 120 (152)
Q Consensus 75 --~---i~-Hpnv~~~G~vcl~~l~~~W~p-~~~i~~il~~l~~ll~~p~~~~ 120 (152)
+ |+ ||||+.+|+||+++|. +|++ +.++.++|.+|+++|.+|+++.
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 1 77 9999999999999995 6998 5899999999999999999874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.81 E-value=2.5e-21 Score=134.51 Aligned_cols=92 Identities=21% Similarity=0.477 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCc----------EEEEEEEecCCCCCCCCeeeEecc
Q 031816 6 RKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG----------TFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~~p~~yP~~pP~v~f~t~ 75 (152)
..||.+||..|-+ +++...++...|...+.||+||+|.|+ .|++++.||.+||.+||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 5899999999976 566666666789999999999999999 999999999999999999999995
Q ss_pred -CccccccCCCcEeecCcCCCCCC-------cCCHHHHH
Q 031816 76 -MFHPNIYADGSICLDILQNQWSP-------IYDVAAIL 106 (152)
Q Consensus 76 -i~Hpnv~~~G~vcl~~l~~~W~p-------~~~i~~il 106 (152)
.+|||++.+|+||++++ |+| .++|...|
T Consensus 110 dgkt~kmYr~GkICLdIh---wkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTH---FFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTT---HHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccc---cchhhHhcCCchhHHHHH
Confidence 89999999999999987 554 45566554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.60 E-value=1.1e-15 Score=107.30 Aligned_cols=81 Identities=25% Similarity=0.509 Sum_probs=71.3
Q ss_pred cCCCcceeEEEEECCCCCCCCCcEEE--EEEEecCCCCCCCCeeeEecc------CccccccCCCcEeecCcCCCCCC-c
Q 031816 29 QDNNIMLWNAVIFGPDDTPWDGGTFK--LTLQFTEDYPNKPPTVRFVSR------MFHPNIYADGSICLDILQNQWSP-I 99 (152)
Q Consensus 29 ~~~~~~~w~~~i~gp~~t~y~gg~f~--~~i~~p~~yP~~pP~v~f~t~------i~Hpnv~~~G~vcl~~l~~~W~p-~ 99 (152)
...+++.|.++|. .+|+|+.|. +.|.||++||++||.| |.++ .+||||+.+|+||++.|.+ |++ .
T Consensus 49 ~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~ 122 (146)
T 3obq_A 49 GSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQ 122 (146)
T ss_dssp TTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTT
T ss_pred ChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCC
Confidence 3568899999996 679999998 4999999999999999 6655 5899999999999999965 987 7
Q ss_pred CCHHHHHHHHHHhhcC
Q 031816 100 YDVAAILTSIQSLLCD 115 (152)
Q Consensus 100 ~~i~~il~~l~~ll~~ 115 (152)
.++.+++..++++|.+
T Consensus 123 snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 123 SDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999999863
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.99 E-value=0.0054 Score=41.20 Aligned_cols=68 Identities=13% Similarity=0.209 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEec
Q 031816 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t 74 (152)
...+...|+..|..--+..+.+. .+....+.+.+....+..-..-.+.+.+.+|++||.+||.+.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 34567788888886544455443 222345555554222222234478899999999999999998755
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.39 E-value=0.032 Score=37.33 Aligned_cols=69 Identities=13% Similarity=0.103 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecC--CCcceeEEEEECCCCCCC--CCcEEEEEEEecCCCCCCCCeeeEecc
Q 031816 7 KRLMRDFKRLQQDPPAGISGAPQD--NNIMLWNAVIFGPDDTPW--DGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 7 ~RL~~E~~~l~~~~~~g~~~~~~~--~~~~~w~~~i~gp~~t~y--~gg~f~~~i~~p~~yP~~pP~v~f~t~ 75 (152)
.+...|+..|..--+..+.+.... .....+.+.+..+.+..- ..-.+.+.+.+|++||..+|.|...+.
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 356788888876555555543222 123344445532222111 124788999999999999999988763
No 58
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.00 E-value=0.086 Score=37.93 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCccccccCCCc
Q 031816 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGS 86 (152)
Q Consensus 7 ~RL~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~~G~ 86 (152)
.+|.+|+.++-=+ .+.-.+.++....+.+.... |....++|.++.+||.++|.+...-|+ |
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------- 64 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--P------- 64 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--C-------
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--C-------
Confidence 3678888888222 13334567888888886443 568999999999999999988655443 1
Q ss_pred EeecCcCCCCCCcCCHHHHHHHHHHhh
Q 031816 87 ICLDILQNQWSPIYDVAAILTSIQSLL 113 (152)
Q Consensus 87 vcl~~l~~~W~p~~~i~~il~~l~~ll 113 (152)
+.-.|.+..++.+++...+..+
T Consensus 65 -----~~~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 65 -----FCASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHHH
T ss_pred -----cccccCCCccHHHHHHHHHHHH
Confidence 1246999989888887666554
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.94 E-value=0.1 Score=35.22 Aligned_cols=68 Identities=10% Similarity=0.196 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecC------CCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEec
Q 031816 6 RKRLMRDFKRLQQDPPAGISGAPQD------NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~g~~~~~~~------~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t 74 (152)
..+-..|+..|..--+..+.+.... .....+.+.+....+ .-..-.+.+.+.+|++||..||.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 3455678888876544444332111 124566777753332 1123478899999999999999998765
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.65 E-value=0.2 Score=34.64 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=21.4
Q ss_pred EEEEEEEecCCCCCCCCeeeEecc
Q 031816 52 TFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 52 ~f~~~i~~p~~yP~~pP~v~f~t~ 75 (152)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999986653
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.78 E-value=0.16 Score=33.87 Aligned_cols=66 Identities=9% Similarity=0.034 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCCCC--CeEEee-cCCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEec
Q 031816 8 RLMRDFKRLQQDPPA--GISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 8 RL~~E~~~l~~~~~~--g~~~~~-~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t 74 (152)
....|+..|..--+. .+.+.. ...+...+.+.+..... .-..-.+.+.+.+|++||..+|.|.+.+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGF-MDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTT-TTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCC-CCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 456688777653221 333221 12234567777743221 1113478999999999999999997653
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.07 E-value=0.34 Score=32.50 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCC-----CcceeEEEEECCCC-C-CCCCcEEEEEEEecCCCCCCCCeeeEec
Q 031816 6 RKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDD-T-PWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~g~~~~~~~~-----~~~~w~~~i~gp~~-t-~y~gg~f~~~i~~p~~yP~~pP~v~f~t 74 (152)
..+...|+..|..--+..+.+..... ......+.+. +.+ . .-..-.+.+.|.||++||..+|.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 45567788888765444454332111 1344555663 222 1 0112468899999999999999998753
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.62 E-value=0.19 Score=34.65 Aligned_cols=25 Identities=24% Similarity=0.357 Sum_probs=21.6
Q ss_pred cEEEEEEEecCCCCCCCCeeeEecc
Q 031816 51 GTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 51 g~f~~~i~~p~~yP~~pP~v~f~t~ 75 (152)
-.+.+.+.+|.+||..||.|...+.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987754
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=85.32 E-value=0.77 Score=21.31 Aligned_cols=21 Identities=29% Similarity=0.675 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCe
Q 031816 4 PARKRLMRDFKRLQQDPPAGI 24 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~g~ 24 (152)
+.+.||..|+..++.+||.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 467899999999999999874
No 65
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=73.37 E-value=0.69 Score=30.24 Aligned_cols=31 Identities=10% Similarity=-0.028 Sum_probs=0.0
Q ss_pred CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH
Q 031816 116 PNPNSPANSEAARMFSENKREYNRRVREIVE 146 (152)
Q Consensus 116 p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~ 146 (152)
.....|.+.+.|++|++|++.|...||.|+.
T Consensus 21 ~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~ 51 (108)
T 2cwb_A 21 ETTTEAVDAATAEKVFKQYANDNGVDGEWTY 51 (108)
T ss_dssp -------------------------------
T ss_pred cccCCchhHHHHHHHHhchhccccccccccc
Confidence 3445688999999999999999999999883
No 66
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=67.97 E-value=7.8 Score=31.96 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=25.2
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhcC
Q 031816 124 SEAARMFSENKREYNRRVREIVEQSWTAD 152 (152)
Q Consensus 124 ~~a~~~~~~~~~~f~~~~r~~~~~~~~~~ 152 (152)
.|+..+..+|++.|.++|++++.++.+.|
T Consensus 278 ee~~~l~~~dp~~~~~~~~~Sm~rhv~am 306 (552)
T 2fkn_A 278 DEADRLRQDTPELYVRLAKQSMKKHVEAM 306 (552)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 46788889999999999999999887654
No 67
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=67.30 E-value=8.2 Score=31.82 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=25.2
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhcC
Q 031816 124 SEAARMFSENKREYNRRVREIVEQSWTAD 152 (152)
Q Consensus 124 ~~a~~~~~~~~~~f~~~~r~~~~~~~~~~ 152 (152)
.|+..+..+|++.|.++|++++.++.+.|
T Consensus 277 ee~~~l~~~dp~~~~~~~~~Sm~rhv~am 305 (551)
T 1x87_A 277 DEAAELRARDPKQYIARAKQSIAAHVRAM 305 (551)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 47788889999999999999999887654
No 68
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=67.10 E-value=8.4 Score=31.80 Aligned_cols=29 Identities=3% Similarity=-0.080 Sum_probs=25.1
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhcC
Q 031816 124 SEAARMFSENKREYNRRVREIVEQSWTAD 152 (152)
Q Consensus 124 ~~a~~~~~~~~~~f~~~~r~~~~~~~~~~ 152 (152)
.|+..+..+|++.|.+.|++++.++.+.|
T Consensus 282 ee~~~l~~~dp~~~~~~~~~Sm~rhv~Am 310 (557)
T 1uwk_A 282 EQYRDRAQTEPAAVVKAAKQSMAVHVQAM 310 (557)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 46788889999999999999999887654
No 69
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=37.73 E-value=14 Score=17.02 Aligned_cols=16 Identities=38% Similarity=0.706 Sum_probs=9.6
Q ss_pred CCCCCeeeEeccCccc
Q 031816 64 PNKPPTVRFVSRMFHP 79 (152)
Q Consensus 64 P~~pP~v~f~t~i~Hp 79 (152)
|..-|.-.|..+.|||
T Consensus 4 pmtlpenyfserpyhp 19 (26)
T 2jrw_A 4 PMTLPENYFSERPYHP 19 (26)
T ss_dssp CCCCSSSSCCSSSCCS
T ss_pred ccccchhhcccCCCCC
Confidence 4444555666667776
No 70
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=34.18 E-value=34 Score=24.69 Aligned_cols=26 Identities=12% Similarity=0.382 Sum_probs=22.1
Q ss_pred CCCcEEEEEEEecCCCCC-----CCCeeeEe
Q 031816 48 WDGGTFKLTLQFTEDYPN-----KPPTVRFV 73 (152)
Q Consensus 48 y~gg~f~~~i~~p~~yP~-----~pP~v~f~ 73 (152)
-+.|.|.|.-.+|--||. .||.|.|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 356899999999999998 78888775
No 71
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=33.96 E-value=1e+02 Score=21.59 Aligned_cols=47 Identities=21% Similarity=0.439 Sum_probs=33.6
Q ss_pred CCCcceeEEEEECCCCCCCCCcEEEEEEEecCCCCCCCCeeeEeccCcc
Q 031816 30 DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 30 ~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 78 (152)
++....|.+.+.|+.|.--..-+=++...+.+.||. |...+..+.|.
T Consensus 29 ~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPFe 75 (175)
T 3rls_A 29 AEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPFE 75 (175)
T ss_dssp TTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSEE
T ss_pred CCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCCE
Confidence 345679999999987754444556888999999974 66666665543
No 72
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=32.38 E-value=88 Score=21.62 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=29.2
Q ss_pred CcceeEEEEECCCCC-------------CCCCcEEEEEEEecCCCCCCCCe
Q 031816 32 NIMLWNAVIFGPDDT-------------PWDGGTFKLTLQFTEDYPNKPPT 69 (152)
Q Consensus 32 ~~~~w~~~i~gp~~t-------------~y~gg~f~~~i~~p~~yP~~pP~ 69 (152)
+..+|.++..|..++ |-.-|.++|.++-++=-|.+-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 445899999887653 77789999999887766666665
No 73
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=31.95 E-value=25 Score=23.75 Aligned_cols=31 Identities=26% Similarity=0.396 Sum_probs=24.6
Q ss_pred CCCCeeeEe---ccCccccccCCCcEeecCcCCC
Q 031816 65 NKPPTVRFV---SRMFHPNIYADGSICLDILQNQ 95 (152)
Q Consensus 65 ~~pP~v~f~---t~i~Hpnv~~~G~vcl~~l~~~ 95 (152)
..||.|.+- +.--|++|..+|.+|+++|.++
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 75 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGEA 75 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBTT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCHH
Confidence 368988775 3456899999999999998654
No 74
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=30.92 E-value=53 Score=18.83 Aligned_cols=20 Identities=10% Similarity=0.273 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHCHHHHHHHH
Q 031816 122 ANSEAARMFSENKREYNRRV 141 (152)
Q Consensus 122 ~n~~a~~~~~~~~~~f~~~~ 141 (152)
.|++.+.+..+|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 68999999999999998875
No 75
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=28.58 E-value=53 Score=19.52 Aligned_cols=22 Identities=9% Similarity=0.240 Sum_probs=19.4
Q ss_pred CCCHHHHHHHHHCHHHHHHHHH
Q 031816 121 PANSEAARMFSENKREYNRRVR 142 (152)
Q Consensus 121 p~n~~a~~~~~~~~~~f~~~~r 142 (152)
-.|++.+.+..+|.++|.+...
T Consensus 38 ~~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 38 RENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TTCHHHHHHHHTTHHHHHHHHH
T ss_pred hHCHHHHHHHHHCHHHHHHHHc
Confidence 3789999999999999998864
No 76
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=27.47 E-value=1.2e+02 Score=19.86 Aligned_cols=29 Identities=7% Similarity=0.068 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCc
Q 031816 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNI 33 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~g~~~~~~~~~~ 33 (152)
-.+.|..||.++.+.++..++++-.+...
T Consensus 32 lS~~Lid~La~i~~~~~e~fTle~i~s~~ 60 (122)
T 1u9d_A 32 LVPTLLNELSSLLSTARNAFTFELINTQY 60 (122)
T ss_dssp HHHHHHHHHHHHHTCCGGGCEEEECCCCC
T ss_pred HhHHHHHHHHHHHCCCcccEEEEEeeeEE
Confidence 35778899999999999999988766543
No 77
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=25.55 E-value=1.2e+02 Score=20.74 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=25.1
Q ss_pred CcceeEEEEECCCCC-------------CCCCcEEEEEEEecCCCCCC
Q 031816 32 NIMLWNAVIFGPDDT-------------PWDGGTFKLTLQFTEDYPNK 66 (152)
Q Consensus 32 ~~~~w~~~i~gp~~t-------------~y~gg~f~~~i~~p~~yP~~ 66 (152)
+..+|.++..|.+++ |-.-|.++|.+.-++=.|.+
T Consensus 37 ~dlewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpPd~~~ 84 (155)
T 1roc_A 37 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 84 (155)
T ss_dssp SCEEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred CCcEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCCCCccc
Confidence 347899998887653 67779999988876644433
No 78
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=24.69 E-value=39 Score=20.90 Aligned_cols=13 Identities=54% Similarity=0.777 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHH
Q 031816 4 PARKRLMRDFKRL 16 (152)
Q Consensus 4 ~a~~RL~~E~~~l 16 (152)
+.+||+++|++-|
T Consensus 62 sQLKRvQRdlrGL 74 (87)
T 2rf4_B 62 SQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcCC
Confidence 4578999998765
No 79
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=22.36 E-value=1.2e+02 Score=18.89 Aligned_cols=24 Identities=21% Similarity=0.483 Sum_probs=19.1
Q ss_pred CCcEEEEEEEecCCCCCCCCeeeEe
Q 031816 49 DGGTFKLTLQFTEDYPNKPPTVRFV 73 (152)
Q Consensus 49 ~gg~f~~~i~~p~~yP~~pP~v~f~ 73 (152)
.+..+...|.|+..|+ ++|+|.+-
T Consensus 27 g~R~~~~~V~F~~~F~-~~P~V~v~ 50 (101)
T 2ccv_A 27 NTRELAKNITFASPYC-RPPVVLLS 50 (101)
T ss_dssp SCEEEEEEEECSSCCS-SCCEEEEE
T ss_pred cceEEEEEeEeCcccC-CCCEEEEE
Confidence 3446788899999999 58998775
No 80
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=22.19 E-value=21 Score=23.86 Aligned_cols=31 Identities=19% Similarity=0.424 Sum_probs=24.7
Q ss_pred CCCCeeeEe---ccCccccccCCCcEeecCcCCC
Q 031816 65 NKPPTVRFV---SRMFHPNIYADGSICLDILQNQ 95 (152)
Q Consensus 65 ~~pP~v~f~---t~i~Hpnv~~~G~vcl~~l~~~ 95 (152)
..||.|.|- +.--|++|..+|.+|++++.++
T Consensus 40 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 40 LEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 468988876 3456899999999999998654
No 81
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=21.73 E-value=1.9e+02 Score=20.26 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=26.1
Q ss_pred CcceeEEEEECCCCC-------------CCCCcEEEEEEEecCCCCCC
Q 031816 32 NIMLWNAVIFGPDDT-------------PWDGGTFKLTLQFTEDYPNK 66 (152)
Q Consensus 32 ~~~~w~~~i~gp~~t-------------~y~gg~f~~~i~~p~~yP~~ 66 (152)
+.++|.++..|..++ |-.-|.++|.+.-++=.+.+
T Consensus 42 ~dleWkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~ 89 (175)
T 2hue_A 42 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 89 (175)
T ss_dssp SCEEEEEEEESCTTCGGGEEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred CCcEEEEEEEcCCCCccCCeEeeEEEECCccceeEEEEEEcCCCChhh
Confidence 347899999887653 77789999998877644444
No 82
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=21.73 E-value=77 Score=16.47 Aligned_cols=15 Identities=27% Similarity=0.534 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHhc
Q 031816 4 PARKRLMRDFKRLQQ 18 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~ 18 (152)
+..+|+..|.+.+++
T Consensus 28 ~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 28 SKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 467899999998763
No 83
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=21.31 E-value=1.6e+02 Score=20.63 Aligned_cols=34 Identities=15% Similarity=0.266 Sum_probs=24.9
Q ss_pred CcceeEEEEECCCCC-------------CCCCcEEEEEEEecCCCCC
Q 031816 32 NIMLWNAVIFGPDDT-------------PWDGGTFKLTLQFTEDYPN 65 (152)
Q Consensus 32 ~~~~w~~~i~gp~~t-------------~y~gg~f~~~i~~p~~yP~ 65 (152)
+.++|.++..|..++ |-.-|.++|.+.-++=.|.
T Consensus 38 ~dleWkliYVgSa~s~~~DQ~Ldsv~VGPi~~G~~kFv~~adpPd~~ 84 (179)
T 2idc_A 38 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAE 84 (179)
T ss_dssp SCEEEEEEECSCTTCGGGCEEEEEEEECSCCSEEEEEEEEECCCCGG
T ss_pred CCcEEEEEEEcCCCcccCCeEeeEEEECCccceeEEEEEEcCCCCcc
Confidence 347899999887653 6778999998887653333
No 84
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=20.90 E-value=48 Score=24.46 Aligned_cols=26 Identities=23% Similarity=0.433 Sum_probs=21.8
Q ss_pred CCCcEEEEEEEecCCCC-------CCCCeeeEe
Q 031816 48 WDGGTFKLTLQFTEDYP-------NKPPTVRFV 73 (152)
Q Consensus 48 y~gg~f~~~i~~p~~yP-------~~pP~v~f~ 73 (152)
-+.|.|.|.-.+|--|| ..||.|.|.
T Consensus 133 D~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 133 DDNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp CTTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 34689999999999998 478888876
Done!