BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031820
(152 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SRV|A Chain A, Thermus Thermophilus Groel (Hsp60 Class) Fragment (Apical
Domain) Comprising Residues 192-336
Length = 145
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 9/107 (8%)
Query: 8 VSSYF-TNQKAKDCVLENPFLLILENMIVSKN----IVEQAIAQADSRPLLIVAEDVEDK 62
+S YF TN + + VLE+ F+LI+E + + I+EQ +AQ +PLLI+AEDVE +
Sbjct: 9 ISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ-VAQT-GKPLLIIAEDVEGE 66
Query: 63 LIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ +L++ K L+ +S+A + K ++ D+A +TGG V++
Sbjct: 67 ALATLVVNK--LRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVIS 111
>pdb|1KID|A Chain A, Groel (Hsp60 Class) Fragment (Apical Domain) Comprising
Residues 191-376, Mutant With Ala 262 Replaced With Leu
And Ile 267 Replaced With Met
Length = 203
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 1 MKLKWRPVSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLI 54
M+ +S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI
Sbjct: 20 MQFDRGYLSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLI 76
Query: 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+AEDVE + + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 77 IAEDVEGEALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 129
>pdb|1JON|A Chain A, Groel (Hsp60 Class) Fragment Comprising Residues 191-345
Length = 155
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 1 MKLKWRPVSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLI 54
M+ +S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI
Sbjct: 3 MQFDRGYLSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLI 59
Query: 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+AEDVE + + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 60 IAEDVEGEALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 112
>pdb|1DK7|A Chain A, Crystal Structure Of An Isolated Apical Domain Of Groel
pdb|1DK7|B Chain B, Crystal Structure Of An Isolated Apical Domain Of Groel
pdb|1DKD|A Chain A, Crystal Structure Of A Groel (Apical Domain) And A
Dodecameric Peptide Complex
pdb|1DKD|B Chain B, Crystal Structure Of A Groel (Apical Domain) And A
Dodecameric Peptide Complex
pdb|1DKD|C Chain C, Crystal Structure Of A Groel (Apical Domain) And A
Dodecameric Peptide Complex
pdb|1DKD|D Chain D, Crystal Structure Of A Groel (Apical Domain) And A
Dodecameric Peptide Complex
Length = 146
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 1 MKLKWRPVSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLI 54
M+ +S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI
Sbjct: 3 MQFDRGYLSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLI 59
Query: 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+AEDVE + + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 60 IAEDVEGEALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 112
>pdb|1FY9|A Chain A, Crystal Structure Of The Hexa-Substituted Mutant Of The
Molecular Chaperonin Groel Apical Domain
Length = 193
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 11/115 (9%)
Query: 1 MKLKWRPVSSYFTNQ-KAKDCVLENPFLLILENMIVSKNIVE-----QAIAQADSRPLLI 54
M+ +S YF N+ + + LE+PF+L+++ I NI E +A+A+A +PLLI
Sbjct: 10 MQFDRGYLSPYFINKPETGEVELESPFILLVDKKI--SNIRELLPVLEAVAKA-GKPLLI 66
Query: 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+AEDVE + + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 67 IAEDVEGEALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 119
>pdb|1LA1|A Chain A, Gro-El Fragment (Apical Domain) Comprising Residues
188-379
Length = 192
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 1 MKLKWRPVSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLI 54
M+ +S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI
Sbjct: 6 MQFDRGYLSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLI 62
Query: 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+AEDVE + + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 63 IAEDVEGEALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 115
>pdb|1FYA|A Chain A, Crystal Structure Of The Hexa-Substituted Mutant Of The
Molecular Chaperonin Groel Apical Domain
Length = 193
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 1 MKLKWRPVSSYFTNQ-KAKDCVLENPFLLILENMIVSKNIVE-----QAIAQADSRPLLI 54
M+ +S YF N+ + + LE+PF+L+ + I NI E +A+A+A +PLLI
Sbjct: 10 MQFDRGYLSPYFINKPETGEVELESPFILLTDKKI--SNIRELLPVLEAVAKA-GKPLLI 66
Query: 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+AEDVE + + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 67 IAEDVEGEALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 119
>pdb|1WE3|A Chain A, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|B Chain B, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|C Chain C, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|D Chain D, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|E Chain E, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|F Chain F, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|G Chain G, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|H Chain H, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|I Chain I, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|J Chain J, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|K Chain K, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|L Chain L, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|M Chain M, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|N Chain N, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|AA Chain a, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|BB Chain b, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|CC Chain c, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|DD Chain d, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|EE Chain e, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|FF Chain f, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|GG Chain g, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|HH Chain h, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|II Chain i, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|JJ Chain j, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|KK Chain k, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|LL Chain l, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|MM Chain m, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|NN Chain n, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
Length = 543
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 9/107 (8%)
Query: 8 VSSYF-TNQKAKDCVLENPFLLILENMIVSKN----IVEQAIAQADSRPLLIVAEDVEDK 62
+S YF TN + + VLE+ F+LI+E + + I+EQ +AQ +PLLI+AEDVE +
Sbjct: 198 ISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQ-VAQT-GKPLLIIAEDVEGE 255
Query: 63 LIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ +L++ K L+ +S+A + K ++ D+A +TGG V++
Sbjct: 256 ALATLVVNK--LRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVIS 300
>pdb|1SJP|A Chain A, Mycobacterium Tuberculosis Chaperonin60.2
pdb|1SJP|B Chain B, Mycobacterium Tuberculosis Chaperonin60.2
Length = 504
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 11/108 (10%)
Query: 8 VSSYF-TNQKAKDCVLENPFLLILENMIVSKN----IVEQAIAQADSRPLLIVAEDVEDK 62
+S YF T+ + ++ VLE+P++L++ + + + ++E+ I +PLLI+AEDVE +
Sbjct: 156 ISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAG--KPLLIIAEDVEGE 213
Query: 63 LIGSLILGKTCLQNK-VSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ +L++ K K V++ P D KA++ D+AILTGGQV++
Sbjct: 214 ALSTLVVNKIRGTFKSVAVKAPGFGD---RRKAMLQDMAILTGGQVIS 258
>pdb|3RTK|A Chain A, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
pdb|3RTK|B Chain B, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
Length = 546
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 11/108 (10%)
Query: 8 VSSYF-TNQKAKDCVLENPFLLILENMIVSKN----IVEQAIAQADSRPLLIVAEDVEDK 62
+S YF T+ + ++ VLE+P++L++ + + + ++E+ I +PLLI+AEDVE +
Sbjct: 198 ISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAG--KPLLIIAEDVEGE 255
Query: 63 LIGSLILGKTCLQNK-VSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ +L++ K K V++ P D KA++ D+AILTGGQV++
Sbjct: 256 ALSTLVVNKIRGTFKSVAVKAPGFGD---RRKAMLQDMAILTGGQVIS 300
>pdb|1SS8|A Chain A, Groel
pdb|1SS8|B Chain B, Groel
pdb|1SS8|C Chain C, Groel
pdb|1SS8|D Chain D, Groel
pdb|1SS8|E Chain E, Groel
pdb|1SS8|F Chain F, Groel
pdb|1SS8|G Chain G, Groel
Length = 524
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|1PCQ|A Chain A, Crystal Structure Of Groel-Groes
pdb|1PCQ|B Chain B, Crystal Structure Of Groel-Groes
pdb|1PCQ|C Chain C, Crystal Structure Of Groel-Groes
pdb|1PCQ|D Chain D, Crystal Structure Of Groel-Groes
pdb|1PCQ|E Chain E, Crystal Structure Of Groel-Groes
pdb|1PCQ|F Chain F, Crystal Structure Of Groel-Groes
pdb|1PCQ|G Chain G, Crystal Structure Of Groel-Groes
pdb|1PCQ|H Chain H, Crystal Structure Of Groel-Groes
pdb|1PCQ|I Chain I, Crystal Structure Of Groel-Groes
pdb|1PCQ|J Chain J, Crystal Structure Of Groel-Groes
pdb|1PCQ|K Chain K, Crystal Structure Of Groel-Groes
pdb|1PCQ|L Chain L, Crystal Structure Of Groel-Groes
pdb|1PCQ|M Chain M, Crystal Structure Of Groel-Groes
pdb|1PCQ|N Chain N, Crystal Structure Of Groel-Groes
pdb|1PF9|A Chain A, Groel-Groes-Adp
pdb|1PF9|B Chain B, Groel-Groes-Adp
pdb|1PF9|C Chain C, Groel-Groes-Adp
pdb|1PF9|D Chain D, Groel-Groes-Adp
pdb|1PF9|E Chain E, Groel-Groes-Adp
pdb|1PF9|F Chain F, Groel-Groes-Adp
pdb|1PF9|G Chain G, Groel-Groes-Adp
pdb|1PF9|H Chain H, Groel-Groes-Adp
pdb|1PF9|I Chain I, Groel-Groes-Adp
pdb|1PF9|J Chain J, Groel-Groes-Adp
pdb|1PF9|K Chain K, Groel-Groes-Adp
pdb|1PF9|L Chain L, Groel-Groes-Adp
pdb|1PF9|M Chain M, Groel-Groes-Adp
pdb|1PF9|N Chain N, Groel-Groes-Adp
pdb|1SVT|A Chain A, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|B Chain B, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|C Chain C, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|D Chain D, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|E Chain E, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|F Chain F, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|G Chain G, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|H Chain H, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|I Chain I, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|J Chain J, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|K Chain K, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|L Chain L, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|M Chain M, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|N Chain N, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SX4|A Chain A, Groel-Groes-Adp7
pdb|1SX4|B Chain B, Groel-Groes-Adp7
pdb|1SX4|C Chain C, Groel-Groes-Adp7
pdb|1SX4|D Chain D, Groel-Groes-Adp7
pdb|1SX4|E Chain E, Groel-Groes-Adp7
pdb|1SX4|F Chain F, Groel-Groes-Adp7
pdb|1SX4|G Chain G, Groel-Groes-Adp7
pdb|1SX4|H Chain H, Groel-Groes-Adp7
pdb|1SX4|I Chain I, Groel-Groes-Adp7
pdb|1SX4|J Chain J, Groel-Groes-Adp7
pdb|1SX4|K Chain K, Groel-Groes-Adp7
pdb|1SX4|L Chain L, Groel-Groes-Adp7
pdb|1SX4|M Chain M, Groel-Groes-Adp7
pdb|1SX4|N Chain N, Groel-Groes-Adp7
pdb|2YNJ|A Chain A, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|B Chain B, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|C Chain C, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|D Chain D, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|E Chain E, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|F Chain F, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|G Chain G, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|H Chain H, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|I Chain I, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|J Chain J, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|K Chain K, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|L Chain L, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|M Chain M, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|N Chain N, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
Length = 524
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|1SX3|A Chain A, Groel14-(Atpgammas)14
pdb|1SX3|B Chain B, Groel14-(Atpgammas)14
pdb|1SX3|C Chain C, Groel14-(Atpgammas)14
pdb|1SX3|D Chain D, Groel14-(Atpgammas)14
pdb|1SX3|E Chain E, Groel14-(Atpgammas)14
pdb|1SX3|F Chain F, Groel14-(Atpgammas)14
pdb|1SX3|G Chain G, Groel14-(Atpgammas)14
pdb|1SX3|H Chain H, Groel14-(Atpgammas)14
pdb|1SX3|I Chain I, Groel14-(Atpgammas)14
pdb|1SX3|J Chain J, Groel14-(Atpgammas)14
pdb|1SX3|K Chain K, Groel14-(Atpgammas)14
pdb|1SX3|L Chain L, Groel14-(Atpgammas)14
pdb|1SX3|M Chain M, Groel14-(Atpgammas)14
pdb|1SX3|N Chain N, Groel14-(Atpgammas)14
Length = 525
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|1J4Z|A Chain A, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|B Chain B, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|C Chain C, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|D Chain D, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|E Chain E, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|F Chain F, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|G Chain G, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|H Chain H, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|I Chain I, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|J Chain J, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|K Chain K, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|L Chain L, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|M Chain M, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|N Chain N, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|O Chain O, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|P Chain P, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Q Chain Q, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|R Chain R, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|S Chain S, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|T Chain T, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|U Chain U, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|V Chain V, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|W Chain W, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|X Chain X, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Y Chain Y, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Z Chain Z, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|1 Chain 1, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|2 Chain 2, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
Length = 547
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|2YEY|A Chain A, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|B Chain B, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|C Chain C, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|D Chain D, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|E Chain E, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|F Chain F, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|G Chain G, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|H Chain H, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|I Chain I, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|J Chain J, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|K Chain K, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|L Chain L, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|M Chain M, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|N Chain N, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
Length = 524
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|1KP8|A Chain A, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|B Chain B, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|C Chain C, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|D Chain D, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|E Chain E, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|F Chain F, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|G Chain G, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|H Chain H, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|I Chain I, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|J Chain J, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|K Chain K, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|L Chain L, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|M Chain M, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|N Chain N, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
Length = 547
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|3C9V|A Chain A, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|B Chain B, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|C Chain C, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|D Chain D, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|E Chain E, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|F Chain F, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|G Chain G, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|H Chain H, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|I Chain I, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|J Chain J, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|K Chain K, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|L Chain L, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|M Chain M, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|N Chain N, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
Length = 526
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|1AON|A Chain A, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|B Chain B, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|C Chain C, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|D Chain D, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|E Chain E, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|F Chain F, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|G Chain G, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|H Chain H, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|I Chain I, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|J Chain J, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|K Chain K, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|L Chain L, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|M Chain M, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|N Chain N, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1GRU|A Chain A, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|B Chain B, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|C Chain C, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|D Chain D, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|E Chain E, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|F Chain F, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|G Chain G, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|H Chain H, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|I Chain I, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|J Chain J, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|K Chain K, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|L Chain L, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|M Chain M, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|N Chain N, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1MNF|A Chain A, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|B Chain B, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|C Chain C, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|D Chain D, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|E Chain E, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|F Chain F, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|G Chain G, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|H Chain H, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|I Chain I, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|J Chain J, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|K Chain K, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|L Chain L, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|M Chain M, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|N Chain N, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1XCK|A Chain A, Crystal Structure Of Apo Groel
pdb|1XCK|B Chain B, Crystal Structure Of Apo Groel
pdb|1XCK|C Chain C, Crystal Structure Of Apo Groel
pdb|1XCK|D Chain D, Crystal Structure Of Apo Groel
pdb|1XCK|E Chain E, Crystal Structure Of Apo Groel
pdb|1XCK|F Chain F, Crystal Structure Of Apo Groel
pdb|1XCK|G Chain G, Crystal Structure Of Apo Groel
pdb|1XCK|H Chain H, Crystal Structure Of Apo Groel
pdb|1XCK|I Chain I, Crystal Structure Of Apo Groel
pdb|1XCK|J Chain J, Crystal Structure Of Apo Groel
pdb|1XCK|K Chain K, Crystal Structure Of Apo Groel
pdb|1XCK|L Chain L, Crystal Structure Of Apo Groel
pdb|1XCK|M Chain M, Crystal Structure Of Apo Groel
pdb|1XCK|N Chain N, Crystal Structure Of Apo Groel
pdb|2C7C|A Chain A, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|B Chain B, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|C Chain C, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|D Chain D, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|E Chain E, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|F Chain F, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|G Chain G, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|H Chain H, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|I Chain I, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|J Chain J, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|K Chain K, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|L Chain L, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|M Chain M, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|N Chain N, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7D|A Chain A, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|B Chain B, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|C Chain C, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|D Chain D, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|E Chain E, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|F Chain F, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|G Chain G, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|H Chain H, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|I Chain I, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|J Chain J, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|K Chain K, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|L Chain L, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|M Chain M, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|N Chain N, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2CGT|A Chain A, Groel-Adp-Gp31 Complex
pdb|2CGT|B Chain B, Groel-Adp-Gp31 Complex
pdb|2CGT|C Chain C, Groel-Adp-Gp31 Complex
pdb|2CGT|D Chain D, Groel-Adp-Gp31 Complex
pdb|2CGT|E Chain E, Groel-Adp-Gp31 Complex
pdb|2CGT|F Chain F, Groel-Adp-Gp31 Complex
pdb|2CGT|G Chain G, Groel-Adp-Gp31 Complex
pdb|2CGT|H Chain H, Groel-Adp-Gp31 Complex
pdb|2CGT|I Chain I, Groel-Adp-Gp31 Complex
pdb|2CGT|J Chain J, Groel-Adp-Gp31 Complex
pdb|2CGT|K Chain K, Groel-Adp-Gp31 Complex
pdb|2CGT|L Chain L, Groel-Adp-Gp31 Complex
pdb|2CGT|M Chain M, Groel-Adp-Gp31 Complex
pdb|2CGT|N Chain N, Groel-Adp-Gp31 Complex
pdb|2NWC|A Chain A, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|B Chain B, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|C Chain C, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|D Chain D, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|E Chain E, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|F Chain F, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|G Chain G, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|H Chain H, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|I Chain I, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|J Chain J, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|K Chain K, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|L Chain L, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|M Chain M, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|N Chain N, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|3E76|A Chain A, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|B Chain B, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|C Chain C, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|D Chain D, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|E Chain E, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|F Chain F, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|G Chain G, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|H Chain H, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|I Chain I, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|J Chain J, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|K Chain K, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|L Chain L, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|M Chain M, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|N Chain N, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
Length = 547
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|1GR5|A Chain A, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|B Chain B, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|C Chain C, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|D Chain D, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|E Chain E, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|F Chain F, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|G Chain G, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|H Chain H, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|I Chain I, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|J Chain J, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|K Chain K, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|L Chain L, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|M Chain M, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|N Chain N, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|2C7E|A Chain A, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|B Chain B, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|C Chain C, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|D Chain D, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|E Chain E, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|F Chain F, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|G Chain G, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|H Chain H, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|I Chain I, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|J Chain J, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|K Chain K, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|L Chain L, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|M Chain M, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|N Chain N, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
Length = 547
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|4AAQ|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
Length = 548
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 200 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 256
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 257 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 302
>pdb|2EU1|A Chain A, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|B Chain B, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|C Chain C, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|D Chain D, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|E Chain E, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|F Chain F, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|G Chain G, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|H Chain H, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|I Chain I, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|J Chain J, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|K Chain K, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|L Chain L, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|M Chain M, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|N Chain N, Crystal Structure Of The Chaperonin Groel-E461k
Length = 548
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 200 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 256
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + +L++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 257 EALATLVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 302
>pdb|3OSX|A Chain A, Crystal Structure Of Apical Domain Of Insecticidal Groel
From Xenorhapdus Nematophila
Length = 201
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 1 MKLKWRPVSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLI 54
M+ +S YF N+ V LENP++L+++ I NI E + +A+A S+PL+I
Sbjct: 15 MQFDRGYLSPYFINKPESGSVELENPYILLVDKKI--SNIRELLPVLEGVAKA-SKPLVI 71
Query: 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+AEDVE + + +L++ ++ V +A + KA++ D+A LT G V++
Sbjct: 72 IAEDVEGEALATLVV--NNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVIS 124
>pdb|1IOK|A Chain A, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|B Chain B, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|C Chain C, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|D Chain D, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|E Chain E, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|F Chain F, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|G Chain G, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
Length = 545
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 8 VSSYF-TNQKAKDCVLENPFLLILENMIVSKN----IVEQAIAQADSRPLLIVAEDVEDK 62
+S YF TN LE+ ++L+ E + S ++E I +PLLIVAEDVE +
Sbjct: 200 LSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQS--QKPLLIVAEDVEGE 257
Query: 63 LIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ +L++ K L+ + IA + KA++ D+AILTGGQV++
Sbjct: 258 ALATLVVNK--LRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVIS 302
>pdb|1GRL|A Chain A, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|B Chain B, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|C Chain C, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|D Chain D, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|E Chain E, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|F Chain F, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|G Chain G, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
Length = 548
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 200 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 256
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + + ++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 257 EALATAVV--NTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 302
>pdb|3CAU|A Chain A, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|B Chain B, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|C Chain C, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|D Chain D, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|E Chain E, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|F Chain F, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|G Chain G, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|H Chain H, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|I Chain I, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|J Chain J, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|K Chain K, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|L Chain L, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|M Chain M, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|N Chain N, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
Length = 526
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + + ++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATAVV--NTIRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|1OEL|A Chain A, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|B Chain B, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|C Chain C, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|D Chain D, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|E Chain E, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|F Chain F, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|G Chain G, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
Length = 547
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 11/108 (10%)
Query: 8 VSSYFTNQKAKDCV-LENPFLLILENMIVSKNIVE-----QAIAQADSRPLLIVAEDVED 61
+S YF N+ V LE+PF+L+ + I NI E +A+A+A +PLLI+AEDVE
Sbjct: 199 LSPYFINKPETGAVELESPFILLADKKI--SNIREMLPVLEAVAKA-GKPLLIIAEDVEG 255
Query: 62 KLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+ + + ++ ++ V +A + KA++ D+A LTGG V++
Sbjct: 256 EALATAVV--NTIRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVIS 301
>pdb|3M6C|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Groel1
Apical Domain
Length = 194
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 9/107 (8%)
Query: 8 VSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAIAQ--ADSRPLLIVAEDVEDKLI 64
+S+YF T+ + VLE+ +L+ ++ I S + + + +PLLIVAEDVE + +
Sbjct: 15 LSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEAL 74
Query: 65 GSLILG--KTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLN 109
+L++ + L+ V++ P+ + KA ++DLA++TGGQV+N
Sbjct: 75 ATLVVNAIRKTLK-AVAVKGPY---FGDRRKAFLEDLAVVTGGQVVN 117
>pdb|2F9C|A Chain A, Crystal Structure Of Ydck From Salmonella Cholerae. Nesg
Target Scr6
pdb|2F9C|B Chain B, Crystal Structure Of Ydck From Salmonella Cholerae. Nesg
Target Scr6
Length = 334
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 28 LILENMIVSKNIVEQAIAQADSRPLLIVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDD 87
LI N ++ +++ A+ P+L+ +D++ LI G C+Q ++ I + E
Sbjct: 239 LIEGNCVLKHHVLVGGHAEVRGGPILL-----DDRV---LIEGHACIQGEILIERQVEIS 290
Query: 88 YEKETKAIMDDLAILTGGQVLNGATNVSFMPLM 120
A D+ L G +V+NG ++ PL+
Sbjct: 291 GRAAVIAFDDNTIHLRGPKVINGEDRITRTPLV 323
>pdb|2PIG|A Chain A, Crystal Structure Of Ydck From Salmonella Cholerae At 2.38
A Resolution. Northeast Structural Genomics Target Scr6
pdb|2PIG|B Chain B, Crystal Structure Of Ydck From Salmonella Cholerae At 2.38
A Resolution. Northeast Structural Genomics Target Scr6
Length = 334
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 28 LILENMIVSKNIVEQAIAQADSRPLLIVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDD 87
LI N ++ +++ A+ P+L+ +D++ LI G C+Q ++ I + E
Sbjct: 239 LIEGNCVLKHHVLVGGHAEVRGGPILL-----DDRV---LIEGHACIQGEILIERQVEIS 290
Query: 88 YEKETKAIMDDLAILTGGQVLNGATNVSFMPLM 120
A D+ L G +V+NG ++ PL+
Sbjct: 291 GRAAVIAFDDNTIHLRGPKVINGEDRITRTPLV 323
>pdb|3KZF|A Chain A, Structure Of Giardia Carbamate Kinase
pdb|3KZF|B Chain B, Structure Of Giardia Carbamate Kinase
pdb|3KZF|C Chain C, Structure Of Giardia Carbamate Kinase
pdb|3KZF|D Chain D, Structure Of Giardia Carbamate Kinase
Length = 317
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 6 RPVSSYFTNQKAKDCVLENPFLLILENMIVSKNIVEQAIAQADSRPLLIVAEDVEDKLIG 65
+PV ++T Q+AKD + NP ++ E+ +V + RPL IV V LI
Sbjct: 132 KPVGRFYTEQEAKDLMAANPGKILREDAGRGWRVVVPS-----PRPLEIVEYGVIKTLID 186
Query: 66 SLIL 69
+ +L
Sbjct: 187 NNVL 190
>pdb|3OPY|A Chain A, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|C Chain C, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|E Chain E, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
pdb|3OPY|G Chain G, Crystal Structure Of Pichia Pastoris Phosphofructokinase
In The T- State
Length = 989
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 21 VLENPFLLILENMIVSKNIVEQAIAQADSRPLLIVAEDVEDKLIGSLILGKTCLQNKVSI 80
+ +P + ILEN IV + +VE ++AQ + I A+D + L T +N +S+
Sbjct: 525 AIPSPVISILENKIVRQPLVE-SVAQTKTVSAAIEAKDFDKALQLRDQEFATSYENFLSV 583
Query: 81 AKPHEDDYEKETKAIMDDLAILTGG--QVLNGATNVS 115
+K + Y + ++ I G LN AT V+
Sbjct: 584 SKYDDGSYLVPESSRLNIAIIHVGAPTSALNPATRVA 620
>pdb|3MBF|A Chain A, Crystal Structure Of Fructose Bisphosphate Aldolase From
Encephalitozoon Cuniculi, Bound To Fructose
1,6-Bisphosphate
pdb|3MBD|A Chain A, Crystal Structure Of Fructose Bisphosphate Aldolase From
Encephalitozoon Cuniculi, Bound To Phosphate
pdb|3QRH|A Chain A, Crystal Structure Of Fructose Bisphosphate Aldolase From
Encephalitozoon Cuniculi, Bound To Glyceraldehyde
3-Phosphate
Length = 342
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 4 KWRPVSSYFTNQKAKDCVLENPFLLILENMIVSKN 38
KWR + ++ ++DC+ EN +L +I KN
Sbjct: 142 KWRSLFYFYDGIPSEDCINENCSILAKYAIICQKN 176
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,779,631
Number of Sequences: 62578
Number of extensions: 127359
Number of successful extensions: 397
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 334
Number of HSP's gapped (non-prelim): 40
length of query: 152
length of database: 14,973,337
effective HSP length: 90
effective length of query: 62
effective length of database: 9,341,317
effective search space: 579161654
effective search space used: 579161654
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)