Query 031820
Match_columns 152
No_of_seqs 133 out of 1156
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 08:57:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031820.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031820hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ioka2 c.8.5.1 (A:191-366) Gr 100.0 1.4E-61 1E-65 381.3 10.0 148 1-151 3-157 (176)
2 d1sjpa2 c.8.5.1 (A:189-372) Gr 100.0 6.1E-61 4.4E-65 379.5 13.1 148 1-151 2-156 (184)
3 d1kida_ c.8.5.1 (A:) GroEL, A 100.0 7.5E-61 5.5E-65 381.8 11.9 148 1-151 10-164 (193)
4 d1srva_ c.8.5.1 (A:) GroEL, A 100.0 2.4E-60 1.7E-64 364.8 11.6 137 1-140 2-145 (145)
5 d1sjpa3 d.56.1.1 (A:135-188,A: 98.9 1E-12 7.3E-17 92.1 -8.5 31 1-31 56-88 (89)
6 d1q3qa2 c.8.5.2 (A:217-369) Th 98.2 1.4E-06 1E-10 64.2 7.6 112 16-142 12-152 (153)
7 d1assa_ c.8.5.2 (A:) Thermosom 98.1 4.5E-06 3.2E-10 61.4 7.5 109 16-139 13-150 (152)
8 d1a6db2 c.8.5.2 (B:216-367) Th 98.0 8.4E-06 6.1E-10 60.0 7.2 117 3-140 4-149 (152)
9 d1we3a3 d.56.1.1 (A:139-189,A: 97.6 2.6E-07 1.9E-11 63.7 -5.7 25 2-26 52-77 (86)
10 d1gmla_ c.8.5.2 (A:) Thermosom 97.6 0.00011 8.2E-09 54.2 7.7 111 16-141 17-157 (168)
11 d1kp8a3 d.56.1.1 (A:137-190,A: 97.4 3.9E-06 2.9E-10 58.5 -2.6 34 1-44 57-91 (97)
12 d1ioka3 d.56.1.1 (A:137-190,A: 97.3 3.3E-06 2.4E-10 59.1 -3.7 29 1-31 57-86 (97)
13 d1ioka1 a.129.1.1 (A:2-136,A:4 95.9 0.00019 1.4E-08 56.1 -3.0 65 80-150 2-69 (252)
14 d1kp8a1 a.129.1.1 (A:2-136,A:4 95.5 0.00029 2.1E-08 55.1 -3.6 59 80-145 2-64 (252)
15 d1we3a1 a.129.1.1 (A:3-138,A:4 41.8 2.2 0.00016 31.7 -0.4 48 87-145 5-63 (255)
16 d1l0ba2 c.15.1.3 (A:1705-1801) 32.4 16 0.0012 24.2 2.9 48 87-137 12-59 (97)
17 d1jo0a_ d.68.4.1 (A:) YhbY hom 29.3 31 0.0023 22.0 4.0 59 49-110 18-77 (97)
18 d1dqna_ c.61.1.1 (A:) Guanine 24.0 15 0.0011 27.5 1.7 81 8-91 14-100 (230)
19 d1uaia_ b.29.1.18 (A:) Polygul 23.0 14 0.001 27.2 1.4 23 3-25 35-58 (223)
20 d1pd0a5 g.41.10.1 (A:216-300) 22.2 16 0.0012 22.9 1.4 13 5-17 20-33 (85)
21 d1rq8a_ d.68.4.1 (A:) Hypothet 21.8 42 0.003 21.3 3.5 59 49-110 17-76 (96)
22 d2qtva5 g.41.10.1 (A:45-119) S 20.8 18 0.0013 22.4 1.4 8 5-12 18-25 (75)
23 d1c4ka1 c.23.1.4 (A:1-107) Orn 20.1 84 0.0061 20.6 4.9 64 8-79 12-83 (107)
No 1
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]}
Probab=100.00 E-value=1.4e-61 Score=381.32 Aligned_cols=148 Identities=28% Similarity=0.398 Sum_probs=108.7
Q ss_pred CccCCccccccc-cCCCCceEEeeCceEEEecccccchHHHHHHH--HhhcCCCeEEEecccccchhhhhhcccccccce
Q 031820 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (152)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rpLlIiAedv~~eaL~tLv~Nklrg~l~ 77 (152)
|+|||||+|||| ||+++|+|+|+|||||+||+||+++++|+|+| +.+.+|||||||+||+++||++|++|+++|+++
T Consensus 3 ~~~d~Gy~SpyFvtd~~~~~~~l~np~ILi~d~kI~~~~~i~p~Le~~~~~~~PLlIIA~di~~~aL~~Lv~N~~~g~l~ 82 (176)
T d1ioka2 3 MQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLK 82 (176)
T ss_dssp EECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------
T ss_pred cccccCccCccceeCCcCCEEEeeCcEEEEEccccCcHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHHHhcCCce
Confidence 799999999999 99999999999999999999999999999999 888999999999999999999999999999999
Q ss_pred EE-EecCCCCCchhhHhhhhhhhhhhhcCeEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHhhhhhhc
Q 031820 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVH 151 (152)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~il~g~g~~~~i~~rv~ 151 (152)
|| |||| |||++|+++|+|||++|||++|++ .+++++++++||+|++|+|||++|+|++|+|+++.|++||+
T Consensus 83 v~aVkaP---~fG~~r~~~LeDlA~~tGa~vi~~~~g~~l~~~~~~~LG~a~kv~vtk~~T~ii~g~g~~~~i~~Ri~ 157 (176)
T d1ioka2 83 IAAVKAP---GFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVS 157 (176)
T ss_dssp CEEEECS---CCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHH
T ss_pred EEEEeCC---CCCcHHHHHHHHHHHhhCCEEEecccCCChhhCCHHHCceeeEEEEecCceEEEcCCCCHHHHHHHHH
Confidence 99 9999 999999999999999999999998 88999999999999999999999999999999999999985
No 2
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=100.00 E-value=6.1e-61 Score=379.55 Aligned_cols=148 Identities=26% Similarity=0.429 Sum_probs=145.7
Q ss_pred CccCCccccccc-cCCCCceEEeeCceEEEecccccchHHHHHHH--HhhcCCCeEEEecccccchhhhhhcccccccce
Q 031820 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (152)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rpLlIiAedv~~eaL~tLv~Nklrg~l~ 77 (152)
|+|||||+|||| ||+++|+|+|+|||||+||+||+++++|+|+| +.+.+||||||||||++|||++|++|+++|+++
T Consensus 2 ~~~d~Gy~Sp~Fvt~~~~~~~~~~~p~ili~d~ki~~~~~i~p~Le~~~~~~rPLlIIA~di~~~aL~~Lv~N~~~g~l~ 81 (184)
T d1sjpa2 2 MRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFK 81 (184)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEESCEEEEESSCBCCSTTTHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHTTSSC
T ss_pred CccCcCccCcccccCCCCCEEEecCCEEEEecCccCcHHHHHHHHHHhhccCCcEEEEcchhhHHHHHHHHHHHhcCchh
Confidence 799999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-EecCCCCCchhhHhhhhhhhhhhhcCeEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHhhhhhhc
Q 031820 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVH 151 (152)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~il~g~g~~~~i~~rv~ 151 (152)
|| |||| |||++|+++|+|||++|||+||++ .+++++++++||+|++|++|+|+|+|++|.|++++|++||+
T Consensus 82 v~aVkaP---gfG~~r~~~L~DlA~~TGa~vi~~~~g~~l~~~~~~~LG~~~kv~itk~~T~ii~~~g~~~~I~~Ri~ 156 (184)
T d1sjpa2 82 SVAVKAP---GFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVA 156 (184)
T ss_dssp CEEEECS---SCHHHHHHHHHHHHHHHTCCEEBTTTTBCSSSCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHH
T ss_pred eecccCC---CCCcchHHHHHHHHHHhCCEEecccccccccccchhhCCeeeEEEEecCceEEecCCCCHHHHHHHHH
Confidence 99 9999 999999999999999999999998 88999999999999999999999999999999999999986
No 3
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7.5e-61 Score=381.84 Aligned_cols=148 Identities=25% Similarity=0.392 Sum_probs=145.6
Q ss_pred CccCCccccccc-cCCCCceEEeeCceEEEecccccchHHHHHHH--HhhcCCCeEEEecccccchhhhhhcccccccce
Q 031820 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (152)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rpLlIiAedv~~eaL~tLv~Nklrg~l~ 77 (152)
|+|||||+|||| ||+++|+|+|+|||||+||+||+++++|+|+| +.+.+|||||||+||+++||++|++||++|+++
T Consensus 10 ~~~d~Gy~SpyFvtd~~~~~~~l~~p~ILitd~kI~~~~~i~p~Le~~~~~~~pLlIIA~di~~~aL~~Lv~N~~kg~l~ 89 (193)
T d1kida_ 10 MQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVK 89 (193)
T ss_dssp EEESCCCSCGGGCCBTTTTBEEEESCEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHHTTSCC
T ss_pred eeecCCcCCccceeCCCCCEEEecCcEEEEEcCCcccHHHHHHHHHHHHhhCCcEEEEeccccHHHHHHHHHhhhccCcc
Confidence 799999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-EecCCCCCchhhHhhhhhhhhhhhcCeEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCCCChHhhhhhhc
Q 031820 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLLLKKDVH 151 (152)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~il~g~g~~~~i~~rv~ 151 (152)
|| |||| |||++|+++|+|||++|||+||++ .+++++++++||+|++|+||+++|+|++|.|++++|++|++
T Consensus 90 v~aVkaP---gfG~~r~~~LeDlA~~TGa~vi~~~~g~~l~~~~~~~LG~~~kv~itk~~T~ii~g~g~~~~I~~Ri~ 164 (193)
T d1kida_ 90 VAAVKAP---GFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVA 164 (193)
T ss_dssp EEEEECC---SCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHH
T ss_pred eeeccCC---CcChhHHHHHHHHHHHcCCEEechhcccccccCCHhHcCcccEEEEecCceEEEcCCCCHHHHHHHHH
Confidence 99 9999 999999999999999999999999 88999999999999999999999999999999999999986
No 4
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=2.4e-60 Score=364.81 Aligned_cols=137 Identities=26% Similarity=0.417 Sum_probs=134.4
Q ss_pred CccCCccccccc-cCCCCceEEeeCceEEEecccccchHHHHHHH--HhhcCCCeEEEecccccchhhhhhcccccccce
Q 031820 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (152)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rpLlIiAedv~~eaL~tLv~Nklrg~l~ 77 (152)
|+|||||+|||| ||+++|+|+|+|||||+||+||+++++|+|+| +.+.+||||||||||++|||++|++||++|+++
T Consensus 2 ~~~d~Gy~Sp~Fvtd~~~~~~~l~~p~ILi~d~kI~~~~~ilp~Le~~~~~~rPLlIIA~di~~eaL~~Lv~N~~~g~l~ 81 (145)
T d1srva_ 2 YQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLS 81 (145)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCC
T ss_pred CccccCccCCccccCcccCEEEecCceeeecccccccHHHHHHHHHHHHHhCCcEEEEeCccCHHHHHHHHHHHhcCceE
Confidence 799999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-EecCCCCCchhhHhhhhhhhhhhhcCeEeec---cccCCCCCCCCceeeEEEEeCCceEEEcCC
Q 031820 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKELLYQMTRWLSLVGL 140 (152)
Q Consensus 78 v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~il~g~ 140 (152)
|| |||| |||++|+++|+|||++|||+|+++ .++++++.++||+|+||+||+|+|+|++|.
T Consensus 82 v~aVkaP---~fG~~r~~~L~DlAi~tGa~v~~~~~g~~l~~~~~~~LGsa~kv~vtkd~T~ii~Gk 145 (145)
T d1srva_ 82 VAAVKAP---GFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGK 145 (145)
T ss_dssp EEEEECC---SSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEEC
T ss_pred EEEEeCC---CccHHHHHHHhhhhhhhCCEeeccccCcccccCCHHHCCcccEEEEeCCccEEeCCC
Confidence 99 9999 999999999999999999999998 889999999999999999999999999984
No 5
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=98.94 E-value=1e-12 Score=92.11 Aligned_cols=31 Identities=10% Similarity=0.009 Sum_probs=28.4
Q ss_pred CccCCccccccc-cCC-CCceEEeeCceEEEec
Q 031820 1 MKLKWRPVSSYF-TNQ-KAKDCVLENPFLLILE 31 (152)
Q Consensus 1 m~fdrGylSpyf-td~-~~~~~ele~p~ILltd 31 (152)
|+||+||+|||| ||. .+|+++|+|||||++|
T Consensus 56 ~~~d~Gy~Sp~fvtd~k~r~e~~l~~p~ili~d 88 (89)
T d1sjpa3 56 AVIKAGAATEVELKERKHRIEDAVRNAKAAVEE 88 (89)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCccCceEEcccHHhhHHHHhCceEeeec
Confidence 689999999999 875 6789999999999987
No 6
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=98.24 E-value=1.4e-06 Score=64.24 Aligned_cols=112 Identities=14% Similarity=0.125 Sum_probs=82.2
Q ss_pred CCceEEeeCceEEEecccc-------------cchHHHHHHH-------------HhhcCCCeEEEecccccchhhhhhc
Q 031820 16 KAKDCVLENPFLLILENMI-------------VSKNIVEQAI-------------AQADSRPLLIVAEDVEDKLIGSLIL 69 (152)
Q Consensus 16 ~~~~~ele~p~ILltd~kI-------------s~~~~ilp~L-------------~~~~~rpLlIiAedv~~eaL~tLv~ 69 (152)
++|.-.++||.|++.|..+ ++++++..++ +...|--+++....|++.|+..|.-
T Consensus 12 ~~mp~~i~n~kIlll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~nvvl~~k~I~~~a~~~l~~ 91 (153)
T d1q3qa2 12 PRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAK 91 (153)
T ss_dssp TTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHH
T ss_pred ccCCcccCCccEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHhccCccceeecCCCcHHHHHHHHH
Confidence 4677799999999999866 5666666654 3455778999999999999988765
Q ss_pred ccccccceEEEecCCCCCchhhHhhhhhhhhhhhcCeEeeccccCCCCCCCCceeeEEEEe---CCceEEEcCCCC
Q 031820 70 GKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ---MTRWLSLVGLVA 142 (152)
Q Consensus 70 Nklrg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt---kd~T~il~g~g~ 142 (152)
+ | +-++ +-. .+.-|+.||..|||++++. +++++.++||+|.++... .++.+++.|..+
T Consensus 92 ~---g-I~~v-~~v--------~~~dl~ria~~tGa~iv~s--i~~l~~~~LG~~~~~~~~~~g~~~~~~~~gc~~ 152 (153)
T d1q3qa2 92 Y---G-IMAV-RRV--------KKSDMEKLAKATGAKIVTN--VKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN 152 (153)
T ss_dssp T---T-CEEE-CSC--------CHHHHHHHHHHHCCCCBSS--GGGCCGGGCEEESEEEEEEETTEEEEEEECCSS
T ss_pred c---C-Ccee-ccC--------CHHHHHHHHHhhCCEEecc--hhhCCcccCeeeEEEEEEEECCeeEEEEeCCCC
Confidence 5 3 3332 333 1235899999999999986 567788899999998643 345567776544
No 7
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=98.09 E-value=4.5e-06 Score=61.44 Aligned_cols=109 Identities=14% Similarity=0.191 Sum_probs=76.7
Q ss_pred CCceEEeeCceEEEecccc-------------cchHHHHHHH-------------HhhcCCCeEEEecccccchhhhhhc
Q 031820 16 KAKDCVLENPFLLILENMI-------------VSKNIVEQAI-------------AQADSRPLLIVAEDVEDKLIGSLIL 69 (152)
Q Consensus 16 ~~~~~ele~p~ILltd~kI-------------s~~~~ilp~L-------------~~~~~rpLlIiAedv~~eaL~tLv~ 69 (152)
++|.-.++||-|++.|..+ ++.+++..++ +...|--+++....|++.|+..|.-
T Consensus 13 ~~mp~~i~~~kI~ll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~nvvl~~~~I~~~a~~~l~k 92 (152)
T d1assa_ 13 SKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAK 92 (152)
T ss_dssp TTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESSCBCHHHHHHHHH
T ss_pred CCCCccccCceEEEEecccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEeccccHHHHHHHHH
Confidence 4566699999999999844 4444554444 3455666777779999999887765
Q ss_pred ccccccceEEEecCCCCCchhhHhhhhhhhhhhhcCeEeeccccCCCCCCCCceeeEEEEeC---CceEEEcC
Q 031820 70 GKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQM---TRWLSLVG 139 (152)
Q Consensus 70 Nklrg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vtk---d~T~il~g 139 (152)
+ | +-++-+.+ +.-|+.||-.|||++++. +++++.++||+|.++.+.+ ++.+++.|
T Consensus 93 ~---g-I~~v~~v~---------~~dl~ria~atGa~iv~s--~~~l~~~~LG~~~~v~~~~ig~~~~~~~~G 150 (152)
T d1assa_ 93 E---G-IYAVRRVK---------KSDMEKLAKATGAKIVTD--LDDLTPSVLGEAETVEERKIGDDRMTFVMG 150 (152)
T ss_dssp T---T-CEEECSCC---------HHHHHHHHHHHTCCCBSS--TTSCCTTSCEEEEEEEEEEETTEEEEEEES
T ss_pred c---C-CccccCCC---------HHHHHHHHHHhCCceeCC--cccCCcccCeeeeEEEEEEECCEEEEEEec
Confidence 4 3 33331222 335899999999999976 5678899999999887644 34555554
No 8
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=97.98 E-value=8.4e-06 Score=59.98 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=80.7
Q ss_pred cCCccccccccCCCCceEEeeCceEEEeccc-------------ccchHHHHHHH-------------HhhcCCCeEEEe
Q 031820 3 LKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIVEQAI-------------AQADSRPLLIVA 56 (152)
Q Consensus 3 fdrGylSpyftd~~~~~~ele~p~ILltd~k-------------Is~~~~ilp~L-------------~~~~~rpLlIiA 56 (152)
|+++..++ +|--.++||.||+.|.. |++.+++-.++ +...|--+++.-
T Consensus 4 ~~k~~~~~------~mpk~i~~~kIlll~~~Le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~nvv~~~ 77 (152)
T d1a6db2 4 VDKEKVHP------GMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQ 77 (152)
T ss_dssp ESCCCSST------TSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEES
T ss_pred EeccCCCC------CCCCcccCCcEEEEecccccccccccceeeecCHHHHHHHHHHHHHHHHHHHHHHhccCCceEEec
Confidence 45555444 45568999999999973 45666666554 234566777777
Q ss_pred cccccchhhhhhcccccccceEEEecCCCCCchhhHhhhhhhhhhhhcCeEeeccccCCCCCCCCceeeEEEEe---CCc
Q 031820 57 EDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQ---MTR 133 (152)
Q Consensus 57 edv~~eaL~tLv~Nklrg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt---kd~ 133 (152)
..|++.|+..|.-+ | +.++ +-. .+.-|+.||.+|||++++. +++++.++||+|.++... .++
T Consensus 78 k~Idd~a~~~l~k~---g-I~~v-~~v--------~~~dl~rla~~tGa~iv~s--~~~l~~~~LG~~~~v~~~~~g~~~ 142 (152)
T d1a6db2 78 KGIDDMAQHYLSRA---G-IYAV-RRV--------KKSDMDKLAKATGASIVST--IDEISSSDLGTAERVEQVKVGEDY 142 (152)
T ss_dssp SCBCHHHHHHHHHT---T-CEEE-CSC--------CHHHHHHHHHHHTCCEESC--GGGCCGGGCEEEEEEEEEEETTEE
T ss_pred CCCcHHHHHHHHHc---C-cchh-ccC--------CHHHHHHHHHHhCCeeecc--hhhCCcccCcCceEEEEEEECCEE
Confidence 99999999987653 3 3332 222 1335899999999999976 557788999999998643 345
Q ss_pred eEEEcCC
Q 031820 134 WLSLVGL 140 (152)
Q Consensus 134 T~il~g~ 140 (152)
.+++.|.
T Consensus 143 ~~~~~gc 149 (152)
T d1a6db2 143 MTFVTGC 149 (152)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 5666654
No 9
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]}
Probab=97.63 E-value=2.6e-07 Score=63.68 Aligned_cols=25 Identities=20% Similarity=0.141 Sum_probs=22.7
Q ss_pred ccCCccccccc-cCCCCceEEeeCce
Q 031820 2 KLKWRPVSSYF-TNQKAKDCVLENPF 26 (152)
Q Consensus 2 ~fdrGylSpyf-td~~~~~~ele~p~ 26 (152)
.+.+||.|||| ||.++|+|+|+||+
T Consensus 52 eG~~~~~s~~fvtd~~~~~~elenpL 77 (86)
T d1we3a3 52 GVAVIRVGAATETELKEKKHRFEDAL 77 (86)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred EeeecccceeeeeehhhcEEEEeCcH
Confidence 35688999999 99999999999996
No 10
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=97.57 E-value=0.00011 Score=54.23 Aligned_cols=111 Identities=11% Similarity=0.105 Sum_probs=72.9
Q ss_pred CCceEEeeCceEEEeccccc-------------chHHHHHHH-------------HhhcCCCeEEEecccccchhhhhhc
Q 031820 16 KAKDCVLENPFLLILENMIV-------------SKNIVEQAI-------------AQADSRPLLIVAEDVEDKLIGSLIL 69 (152)
Q Consensus 16 ~~~~~ele~p~ILltd~kIs-------------~~~~ilp~L-------------~~~~~rpLlIiAedv~~eaL~tLv~ 69 (152)
++|.-.++||.|++.|..+. +.+++..++ +...+--+++.-..|++.|+..|.-
T Consensus 17 ~~m~~~i~~~kIlll~~~le~~~~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vv~~~~~I~~~a~~~L~~ 96 (168)
T d1gmla_ 17 PRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMR 96 (168)
T ss_dssp TTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHH
T ss_pred cCCccccCCceEEEEeccccccccccccceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHH
Confidence 35677899999999996664 233333332 4455767777778999999987765
Q ss_pred ccccccceEEEecCCCCCchhhHhhhhhhhhhhhcCeEeeccccCCCCCCCCcee-eEEE---EeCCceEEEcCCC
Q 031820 70 GKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSC-KELL---YQMTRWLSLVGLV 141 (152)
Q Consensus 70 Nklrg~l~v~VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a-~~v~---vtkd~T~il~g~g 141 (152)
+.+ -+ ++-. . +..|+.||-.|||++++. +++++.++||.| +... +..+..+++.|..
T Consensus 97 ~gI----~~-~~rv---~-----~~dl~ria~~tga~iv~s--i~~l~~~~lG~~~~~~~~~~~~~~~~~~~~~~~ 157 (168)
T d1gmla_ 97 ANV----TA-IRRV---R-----KTDNNRIARACGARIVSR--PEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 157 (168)
T ss_dssp TTC----EE-ECCC---C-----HHHHHHHHHHHCCCEESC--GGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred CCC----ee-eccC---C-----HHHHHHHHHHHCCceeCc--hhhcCcccccccccEEEEEEECCeEEEEEEecC
Confidence 432 22 3333 1 345899999999999986 567888899985 4332 2334566665543
No 11
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]}
Probab=97.37 E-value=3.9e-06 Score=58.54 Aligned_cols=34 Identities=6% Similarity=-0.126 Sum_probs=25.9
Q ss_pred CccCCccccccc-cCCCCceEEeeCceEEEecccccchHHHHHHH
Q 031820 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI 44 (152)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L 44 (152)
|+||+||+|||| |++..++ +.+ |...++|.|+++
T Consensus 57 ~~~d~G~vS~~fvt~~te~E--~~e--------kk~~veDaL~a~ 91 (97)
T d1kp8a3 57 VAKLAGGVAVIKVGAATEVE--MKE--------KKARVEDALHAT 91 (97)
T ss_dssp HHHHHHCEEEEECCCSSHHH--HHH--------HHHHHHHHHHHH
T ss_pred HHhhcCCccceeecCcchhh--hhh--------ceeEEechHHHH
Confidence 689999999999 9988774 332 233477888887
No 12
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]}
Probab=97.30 E-value=3.3e-06 Score=59.08 Aligned_cols=29 Identities=3% Similarity=-0.225 Sum_probs=23.2
Q ss_pred CccCCccccccc-cCCCCceEEeeCceEEEec
Q 031820 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILE 31 (152)
Q Consensus 1 m~fdrGylSpyf-td~~~~~~ele~p~ILltd 31 (152)
|+||+||+|||| |++++| |+.+++.++.|
T Consensus 57 ~~~~~GyiS~~fv~~~t~~--E~~ekk~~veD 86 (97)
T d1ioka3 57 VAKLAGGVAVIRVGGMTEI--EVKERKDRVDD 86 (97)
T ss_dssp HHTTSSCEEEEEECCSSHH--HHHHHHHHHHH
T ss_pred hhhhhccccccccCCCcee--eeeeccceeec
Confidence 689999999999 999987 56666655544
No 13
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]}
Probab=95.91 E-value=0.00019 Score=56.06 Aligned_cols=65 Identities=6% Similarity=-0.025 Sum_probs=44.0
Q ss_pred EecCCCCCch-hhHhhhhhhhhhhhcCeEeec-cccCCCCCC-CCceeeEEEEeCCceEEEcCCCChHhhhhhh
Q 031820 80 IAKPHEDDYE-KETKAIMDDLAILTGGQVLNG-ATNVSFMPL-MLGSCKELLYQMTRWLSLVGLVASLLLKKDV 150 (152)
Q Consensus 80 VkaP~~~gfG-~~rk~~L~DiAilTGg~vi~~-~~l~~~~~~-~LG~a~~v~vtkd~T~il~g~g~~~~i~~rv 150 (152)
+|.| .|| +.|+.+|+|++++|++.-.+= ..-.++-++ .+| ...||+|.++|+.+-+.++.++.|+
T Consensus 2 ~k~~---~fg~~ar~~~l~gi~~l~~~v~~tlGp~G~~v~i~~~~g---~~~ITkDg~TI~~~i~~~~~~e~~~ 69 (252)
T d1ioka1 2 AKEV---KFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFG---APRITKDGVSVAKEIELSDKFENMG 69 (252)
T ss_dssp CEEE---EEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSS---SCEEECCHHHHHHHCCCSSHHHHHH
T ss_pred CCcc---cCCHHHHHHHHHHHHHHHHhHHhccCCCcCeEEEEcCCC---CceEEcCCceeeeccccCChHHHHH
Confidence 5889 999 669999999999997521100 111222332 333 3568999999999988777665554
No 14
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]}
Probab=95.46 E-value=0.00029 Score=55.08 Aligned_cols=59 Identities=3% Similarity=-0.077 Sum_probs=39.8
Q ss_pred EecCCCCCch-hhHhhhhhhhhhhhcCeEeecc--ccCCCCCC-CCceeeEEEEeCCceEEEcCCCChHh
Q 031820 80 IAKPHEDDYE-KETKAIMDDLAILTGGQVLNGA--TNVSFMPL-MLGSCKELLYQMTRWLSLVGLVASLL 145 (152)
Q Consensus 80 VkaP~~~gfG-~~rk~~L~DiAilTGg~vi~~~--~l~~~~~~-~LG~a~~v~vtkd~T~il~g~g~~~~ 145 (152)
+|+| .|| +.|+.+|+||++++++- -+.+ +-.++-++ .+| +..+|+|.++|+..-.-++.
T Consensus 2 ak~~---~fg~dar~~ll~gi~~la~~v-~~TLGP~g~~~~i~~~~g---~~~iTkDg~ti~~~i~~~d~ 64 (252)
T d1kp8a1 2 AKDV---KFGNDAGVKMLRGVNVLADAV-KVTLGPKGRNVVLDKSFG---APTITKDGVSVAREIELEDK 64 (252)
T ss_dssp CEEE---EEHHHHHHHHHHHHHHHHHHH-HTTCSTTCCEEEECCSSS---SCEEECCHHHHHHHCCCSSH
T ss_pred Cccc---cCCHHHHHHHHHHHHHHHhhH-HhccCCCCCeEEEEcCCC---CeEEEecchheeecccccch
Confidence 5899 999 77999999999999752 1111 11233333 334 46789999999877555444
No 15
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=41.78 E-value=2.2 Score=31.72 Aligned_cols=48 Identities=6% Similarity=-0.003 Sum_probs=33.1
Q ss_pred Cchhh-Hhhhhhhhhhhhc----------CeEeeccccCCCCCCCCceeeEEEEeCCceEEEcCCCChHh
Q 031820 87 DYEKE-TKAIMDDLAILTG----------GQVLNGATNVSFMPLMLGSCKELLYQMTRWLSLVGLVASLL 145 (152)
Q Consensus 87 gfG~~-rk~~L~DiAilTG----------g~vi~~~~l~~~~~~~LG~a~~v~vtkd~T~il~g~g~~~~ 145 (152)
.||+. |+.+++++..+.. .+|+-. ..+| ...+|+|.++++..-.-++.
T Consensus 5 ~f~~~ar~~l~~gv~~la~av~~tlGP~G~~v~i~--------~~~g---~~~itkdg~ti~~~i~l~d~ 63 (255)
T d1we3a1 5 VFDEAARRALERGVNAVANAVKVTLGPRGRNVVLE--------KKFG---SPTITKDGVTVAKEVELEDH 63 (255)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEC--------CSSS---SCEEECCHHHHHHHCCCSSH
T ss_pred ccCHHHHHHHHHhHHHHHHHHhcccCCCcCeEEEE--------cCCC---CceEecchhhhhhhccccch
Confidence 79987 9999999988863 333311 1234 35799999999987654433
No 16
>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=32.44 E-value=16 Score=24.19 Aligned_cols=48 Identities=17% Similarity=0.248 Sum_probs=31.2
Q ss_pred CchhhHhhhhhhhhhhhcCeEeeccccCCCCCCCCceeeEEEEeCCceEEE
Q 031820 87 DYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKELLYQMTRWLSL 137 (152)
Q Consensus 87 gfG~~rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vtkd~T~il 137 (152)
-|++.-++-|+-+--++||+|+++.+ ..+. .-|+-.=|++.+|..+-.
T Consensus 12 pFt~mt~d~Le~mv~lCGAsVvk~~~--~l~~-~~~~~~viVvqpda~t~~ 59 (97)
T d1l0ba2 12 PFTNMPKDELERMLQLCGASVVKELP--LLTR-DTGAHPIVLVQPSAWTED 59 (97)
T ss_dssp CCSSSCHHHHHHHHHHTTCEEECSSS--CGGG-CCSSCCEEEEC-------
T ss_pred cccCCCHHHHHHHHHHcCceeecChh--hcCC-CCCCeeEEEEcCCccccc
Confidence 37888899999999999999999822 1222 227777888888877644
No 17
>d1jo0a_ d.68.4.1 (A:) YhbY homologue HI1333 {Haemophilus influenzae [TaxId: 727]}
Probab=29.31 E-value=31 Score=22.00 Aligned_cols=59 Identities=7% Similarity=0.049 Sum_probs=37.7
Q ss_pred CCCeEEEecccccchhhhhhcccccccceEE-EecCCCCCchhhHhhhhhhhhhhhcCeEeec
Q 031820 49 SRPLLIVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG 110 (152)
Q Consensus 49 ~rpLlIiAedv~~eaL~tLv~Nklrg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~ 110 (152)
=+|.+-|+.+=-.+++-.=+-+.++. =..+ ||... +..+.|+++.+.||-.||+.++..
T Consensus 18 lkp~v~IGk~Glt~~vi~ei~~al~~-~ELIKvki~~--~~~~~~~~~~~~l~~~t~~~vV~~ 77 (97)
T d1jo0a_ 18 LNPVVMLGGNGLTEGVLAEIENALNH-HELIKVKVAG--ADRETKQLIINAIVRETKAAQVQT 77 (97)
T ss_dssp BCCSEEECTTCSCHHHHHHHHHHHHH-HSEEEEEETT--CCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHh-CCeEEEEEcC--CCHHHHHHHHHHHHHHhCCEEEEE
Confidence 36999888654433333333333332 2334 66542 345678999999999999999976
No 18
>d1dqna_ c.61.1.1 (A:) Guanine PRTase {Giardia lamblia [TaxId: 5741]}
Probab=24.01 E-value=15 Score=27.52 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=56.6
Q ss_pred ccccc-cCCCCceEEeeCceEEEecccccch-HHHHHHH-H-hh-cCCCeEEEecccccchhhhhhcccccccceEE-Ee
Q 031820 8 VSSYF-TNQKAKDCVLENPFLLILENMIVSK-NIVEQAI-A-QA-DSRPLLIVAEDVEDKLIGSLILGKTCLQNKVS-IA 81 (152)
Q Consensus 8 lSpyf-td~~~~~~ele~p~ILltd~kIs~~-~~ilp~L-~-~~-~~rpLlIiAedv~~eaL~tLv~Nklrg~l~v~-Vk 81 (152)
+|-|| .-..-|+.+.+...||+|-..|... +++---+ - -+ .++|+++|+=-=.+=..++-++.++.--+++- |+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~il~t~eeI~~~i~~lA~~I~e~Yk~~~~~~viI~VLkGg~~FaadL~r~L~~~~~idfi~ 93 (230)
T d1dqna_ 14 LSTFFKDRNDVLESEVKKFHLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVK 93 (230)
T ss_dssp HHHHTTTCSSSCGGGGGGCEEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEEC
T ss_pred HHHHhhhhhHHHhhhccceEEEecHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEccCcHHHHHHHHHhcCCCceEEEEE
Confidence 45567 5556688899999999998877753 5555544 1 22 36899999865555566788888887666666 77
Q ss_pred cCCCCCchhh
Q 031820 82 KPHEDDYEKE 91 (152)
Q Consensus 82 aP~~~gfG~~ 91 (152)
+- .|+..
T Consensus 94 vs---SY~g~ 100 (230)
T d1dqna_ 94 VS---SYKGT 100 (230)
T ss_dssp CE---EEECS
T ss_pred EE---EcCCC
Confidence 77 66443
No 19
>d1uaia_ b.29.1.18 (A:) Polyguluronate lyase {Corynebacterium sp. ALY-1 [TaxId: 101519]}
Probab=23.04 E-value=14 Score=27.24 Aligned_cols=23 Identities=17% Similarity=0.278 Sum_probs=17.0
Q ss_pred cCCccccccc-cCCCCceEEeeCc
Q 031820 3 LKWRPVSSYF-TNQKAKDCVLENP 25 (152)
Q Consensus 3 fdrGylSpyf-td~~~~~~ele~p 25 (152)
+..||-+||| +|.+...++|--|
T Consensus 35 l~~~~~~~~Fy~d~~~g~~vF~ap 58 (223)
T d1uaia_ 35 LDTFATAPWFQVNAKCTGVQFRAA 58 (223)
T ss_dssp GGGCCBTTTEEECTTSSSEEEEEE
T ss_pred hhCCccCCeEEEcCCCCEEEEEcC
Confidence 4568899999 9887665666554
No 20
>d1pd0a5 g.41.10.1 (A:216-300) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.22 E-value=16 Score=22.89 Aligned_cols=13 Identities=0% Similarity=0.051 Sum_probs=9.4
Q ss_pred Cccccccc-cCCCC
Q 031820 5 WRPVSSYF-TNQKA 17 (152)
Q Consensus 5 rGylSpyf-td~~~ 17 (152)
++|++||+ -+...
T Consensus 20 ~ayiNP~~~~~~~g 33 (85)
T d1pd0a5 20 RSYMNPFVTFIEQG 33 (85)
T ss_dssp CCBCCTTCEEETTT
T ss_pred cCEECCceEEeCCC
Confidence 68999999 44443
No 21
>d1rq8a_ d.68.4.1 (A:) Hypothetical protein SAV1595 {Staphylococcus aureus, (strain Mu50 / ATCC 700699) [TaxId: 1280]}
Probab=21.85 E-value=42 Score=21.31 Aligned_cols=59 Identities=8% Similarity=0.071 Sum_probs=37.6
Q ss_pred CCCeEEEecccccchhhhhhcccccccceEE-EecCCCCCchhhHhhhhhhhhhhhcCeEeec
Q 031820 49 SRPLLIVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG 110 (152)
Q Consensus 49 ~rpLlIiAedv~~eaL~tLv~Nklrg~l~v~-VkaP~~~gfG~~rk~~L~DiAilTGg~vi~~ 110 (152)
=+|.+.|+.+=--+++-.=+-+.++- =..+ ||... +-.+.|+++.+.||-.|||.++..
T Consensus 17 l~p~v~IGk~Glt~~vi~ei~~~l~~-~ELIKvk~~~--~~~~~~~~~~~~l~~~t~a~~V~~ 76 (96)
T d1rq8a_ 17 IDPIFQIGKGGINENMIKQIDDTLEN-RELIKVHVLQ--NNFDDKKELAETLSEATRSELVQV 76 (96)
T ss_dssp SCCSCEECSSSCCHHHHHHHHHHHHH-SSEEEEEECC--CCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHh-CCeeEEEecC--CCHHHHHHHHHHHHHHhCCEEEEE
Confidence 36888887644333333333333332 2345 67652 345678999999999999999876
No 22
>d2qtva5 g.41.10.1 (A:45-119) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.80 E-value=18 Score=22.41 Aligned_cols=8 Identities=13% Similarity=0.160 Sum_probs=7.1
Q ss_pred Cccccccc
Q 031820 5 WRPVSSYF 12 (152)
Q Consensus 5 rGylSpyf 12 (152)
|+||+||.
T Consensus 18 ~ayiNP~~ 25 (75)
T d2qtva5 18 KSILNPYC 25 (75)
T ss_dssp CCBCCTTC
T ss_pred CcEECCce
Confidence 67999999
No 23
>d1c4ka1 c.23.1.4 (A:1-107) Ornithine decarboxylase N-terminal "wing" domain {Lactobacillus sp., strain 30a [TaxId: 1591]}
Probab=20.05 E-value=84 Score=20.61 Aligned_cols=64 Identities=19% Similarity=0.149 Sum_probs=40.0
Q ss_pred ccccc-cCCCCceEEeeC------ceEEEecccccchHHHHHHH-HhhcCCCeEEEecccccchhhhhhcccccccceEE
Q 031820 8 VSSYF-TNQKAKDCVLEN------PFLLILENMIVSKNIVEQAI-AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNKVS 79 (152)
Q Consensus 8 lSpyf-td~~~~~~ele~------p~ILltd~kIs~~~~ilp~L-~~~~~rpLlIiAedv~~eaL~tLv~Nklrg~l~v~ 79 (152)
+.+|| |+.+ .+.+++ +.|.++|-. +.++-.+ ...-+=|.+++..+ ++.+..-+++++.|.+..+
T Consensus 12 ~~~~f~T~R~--vV~v~~TDFtDVaAVVvsD~~----~g~l~~i~~TgF~IPvFv~~~~--~~~~~~~~~~~i~gV~~l~ 83 (107)
T d1c4ka1 12 ARQYFDTDRV--VVDAVGSDFTDVGAVIAMDYE----TDVIDAADATKFGIPVFAVTKD--AQAISADELKKIFHIIDLE 83 (107)
T ss_dssp GGGGCCCCSS--CEECSSSCSSSEEEEEEETTC----HHHHHHHHTTCSCCCEEEEESC--STTSCHHHHTTCCEEEECC
T ss_pred hHhhEeccce--EEEcccccccceEEEEEEccc----ccHHHHHHhcCCCCCEEEEecC--CCcCChhhccccceEEecc
Confidence 57899 7754 555554 355566432 2344433 33334699998865 3447777889999976654
Done!