BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031832
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JKD9|ZBT32_MOUSE Zinc finger and BTB domain-containing protein 32 OS=Mus musculus
GN=Zbtb32 PE=1 SV=1
Length = 465
Score = 35.0 bits (79), Expect = 0.17, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 43 GHAKYECPLCKVTAPDIKSMQIHHDARHP-KLP 74
G A Y CPLC+ P + SMQ H P +LP
Sbjct: 401 GAAPYRCPLCRAGCPSLASMQAHMRGHSPSRLP 433
>sp|Q5ZMM5|ZN706_CHICK Zinc finger protein 706 OS=Gallus gallus GN=ZNF706 PE=4 SV=1
Length = 76
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPF 75
Y C +C+ PD K+ + H +++HPK P
Sbjct: 39 YTCTVCRTQMPDPKTFKQHFESKHPKTPL 67
>sp|Q9D115|ZN706_MOUSE Zinc finger protein 706 OS=Mus musculus GN=Znf706 PE=2 SV=1
Length = 76
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPF 75
Y C +C+ PD K+ + H +++HPK P
Sbjct: 39 YTCTVCRTQMPDPKTFKQHFESKHPKTPL 67
>sp|Q9Y5V0|ZN706_HUMAN Zinc finger protein 706 OS=Homo sapiens GN=ZNF706 PE=1 SV=1
Length = 76
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPF 75
Y C +C+ PD K+ + H +++HPK P
Sbjct: 39 YTCTVCRTQMPDPKTFKQHFESKHPKTPL 67
>sp|A2T7S4|ZHX1_PONPY Zinc fingers and homeoboxes protein 1 OS=Pongo pygmaeus GN=ZHX1
PE=3 SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.87, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|A2T771|ZHX1_PANTR Zinc fingers and homeoboxes protein 1 OS=Pan troglodytes GN=ZHX1
PE=3 SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.88, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|A1YG99|ZHX1_PANPA Zinc fingers and homeoboxes protein 1 OS=Pan paniscus GN=ZHX1 PE=3
SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.88, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|P70121|ZHX1_MOUSE Zinc fingers and homeoboxes protein 1 OS=Mus musculus GN=Zhx1 PE=1
SV=2
Length = 873
Score = 32.7 bits (73), Expect = 0.88, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|Q9UKY1|ZHX1_HUMAN Zinc fingers and homeoboxes protein 1 OS=Homo sapiens GN=ZHX1 PE=1
SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.88, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|A1YF22|ZHX1_GORGO Zinc fingers and homeoboxes protein 1 OS=Gorilla gorilla gorilla
GN=ZHX1 PE=3 SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.88, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|Q8R515|ZHX1_RAT Zinc fingers and homeoboxes protein 1 OS=Rattus norvegicus GN=Zhx1
PE=2 SV=1
Length = 873
Score = 32.7 bits (73), Expect = 0.92, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL---VNLHAARVDAESS---KPKPG 98
YEC C PD+ H D+ HP + + + + N R DA S K PG
Sbjct: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 127
>sp|Q96JM2|ZN462_HUMAN Zinc finger protein 462 OS=Homo sapiens GN=ZNF462 PE=1 SV=3
Length = 2506
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPKLPFDEASL 80
Y C C T+P+++S+ H+ HP + + A +
Sbjct: 925 YRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMI 958
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 41 KGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLPFD 76
K G+ Y C LC T ++ ++IH++ H + FD
Sbjct: 1571 KQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFD 1606
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 47 YECPLCKVTAPDIKSMQIHHDARHPK 72
Y+C +C +P++ S+ +H+ +HP+
Sbjct: 1030 YDCDVCSFASPNMHSVLVHYQKKHPE 1055
>sp|Q5M7B7|OPTN_XENLA Optineurin OS=Xenopus laevis GN=optn PE=2 SV=1
Length = 532
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 47 YECPLCKVTAPDIKSMQIH 65
Y CP C +T PD+ ++QIH
Sbjct: 508 YTCPKCNLTVPDMDTLQIH 526
>sp|Q2EI20|REST_DANRE RE1-silencing transcription factor OS=Danio rerio GN=rest PE=2 SV=1
Length = 855
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 46 KYECPLCKVTAPDIKSMQIHHDARHP--KLPFDEASLVNLHAARVDAESSKP 95
++ CP+CK A ++Q H +RHP K + S V L R D + + P
Sbjct: 376 QFLCPVCKYAASKKCNLQYHIKSRHPGCKDISMDVSKVRLRVKRSDGDDASP 427
>sp|Q5R923|OPTN_PONAB Optineurin OS=Pongo abelii GN=OPTN PE=2 SV=1
Length = 527
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 32 GMADRTGREKGGHAKYECPLCKVTAPDIKSMQIH 65
G DR R++ + CP C PDI ++QIH
Sbjct: 488 GAEDRDWRQQRNIPIHSCPKCGEVLPDIDTLQIH 521
>sp|Q895K2|DPO3_CLOTE DNA polymerase III PolC-type OS=Clostridium tetani (strain
Massachusetts / E88) GN=polC PE=3 SV=1
Length = 1427
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 50 PLCKVTAPDIKSMQIHHDARHPKLPFDEASLVNLHAARVDAESSKPKPGIRVVRKDFQCL 109
PLCK P++K +++ A+H +P L+N H A DA+++ ++ K F+ L
Sbjct: 526 PLCKFLYPELKRYKLNVVAKHLGIP-----LLNHHRAVEDAKTTGD-----ILLKAFEDL 575
Query: 110 KACNLEMLRLLDYGLF 125
K + L +L+ F
Sbjct: 576 KDKEIMNLNMLNEEYF 591
>sp|Q95KU9|NEMO_BOVIN NF-kappa-B essential modulator OS=Bos taurus GN=IKBKG PE=1 SV=1
Length = 419
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 46 KYECPLCKVTAPDIKSMQIH 65
K+ CP C+ APDI ++QIH
Sbjct: 394 KFCCPKCQYQAPDIDTLQIH 413
>sp|Q96CV9|OPTN_HUMAN Optineurin OS=Homo sapiens GN=OPTN PE=1 SV=2
Length = 577
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 32 GMADRTGREKGGHAKYECPLCKVTAPDIKSMQIH 65
G DR R++ + CP C PDI ++QIH
Sbjct: 538 GAEDRDWRQQRNIPIHSCPKCGEVLPDIDTLQIH 571
>sp|Q15911|ZFHX3_HUMAN Zinc finger homeobox protein 3 OS=Homo sapiens GN=ZFHX3 PE=1 SV=2
Length = 3703
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 36 RTGREKGGHAKYECPLCKVTAPDIKSMQIHHDARHPKLP 74
+T E Y+CP CK + D+ +++H +H P
Sbjct: 1212 KTAEEIKPEQMYQCPYCKYSNADVNRLRVHAMTQHSVQP 1250
>sp|A0PPG6|SYA_MYCUA Alanine--tRNA ligase OS=Mycobacterium ulcerans (strain Agy99)
GN=alaS PE=3 SV=1
Length = 901
Score = 29.6 bits (65), Expect = 7.9, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 12 AKEIAMKVDAATTNRGGGKAGMADRTGREKGG 43
A E+ + AA RGGGKA +A +G++ G
Sbjct: 854 ANELIKHLAAAVDGRGGGKADLAQGSGKKPAG 885
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,685,507
Number of Sequences: 539616
Number of extensions: 2090948
Number of successful extensions: 5933
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 5875
Number of HSP's gapped (non-prelim): 74
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)