Query 031838
Match_columns 152
No_of_seqs 116 out of 1872
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 09:22:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031838.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031838hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.8E-35 9.6E-40 181.9 15.6 136 12-152 6-141 (169)
2 4b93_B Ankyrin repeat domain-c 100.0 8.6E-35 2.9E-39 191.9 15.4 146 2-152 78-223 (269)
3 4gpm_A Engineered protein OR26 100.0 7.1E-34 2.4E-38 175.6 16.2 136 2-142 29-164 (169)
4 2rfm_A Putative ankyrin repeat 100.0 1.6E-33 5.6E-38 177.3 14.3 145 3-152 28-172 (192)
5 3twr_A Tankyrase-2; ankyrin re 100.0 3.2E-33 1.1E-37 172.1 14.2 143 6-152 4-146 (165)
6 3v31_A Ankyrin repeat family A 100.0 9.8E-33 3.3E-37 170.2 14.7 139 9-152 2-140 (167)
7 3f6q_A Integrin-linked protein 100.0 3.3E-32 1.1E-36 169.6 15.8 141 8-152 3-143 (179)
8 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.3E-32 7.9E-37 168.9 14.5 141 7-152 11-151 (169)
9 1ikn_D Protein (I-kappa-B-alph 100.0 2.4E-32 8.1E-37 176.9 14.5 149 2-152 37-189 (236)
10 3aji_A 26S proteasome non-ATPa 100.0 6.6E-32 2.3E-36 174.1 16.4 146 2-152 65-210 (231)
11 2dzn_A Probable 26S proteasome 100.0 7.5E-32 2.6E-36 173.5 16.4 144 6-152 68-213 (228)
12 3v30_A DNA-binding protein rfx 100.0 3.5E-32 1.2E-36 168.4 14.4 138 11-152 3-140 (172)
13 1s70_B 130 kDa myosin-binding 100.0 1.4E-31 4.8E-36 178.5 18.1 149 2-152 65-270 (299)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 4.2E-32 1.4E-36 177.5 15.0 147 2-152 82-228 (253)
15 1awc_B Protein (GA binding pro 100.0 7E-32 2.4E-36 164.2 15.0 136 11-152 3-138 (153)
16 3hra_A Ankyrin repeat family p 100.0 8.7E-32 3E-36 170.3 15.8 146 2-152 31-183 (201)
17 1bi7_B P16INK4A, MTS1, multipl 100.0 7.7E-33 2.6E-37 169.1 10.2 143 4-152 6-149 (156)
18 2f8y_A Notch homolog 1, transl 100.0 2E-31 6.8E-36 171.1 16.1 141 7-151 22-162 (223)
19 3b7b_A Euchromatic histone-lys 100.0 2.3E-31 7.9E-36 172.2 16.3 147 1-152 2-149 (237)
20 2rfa_A Transient receptor pote 100.0 1.1E-31 3.9E-36 173.2 14.7 143 9-152 2-159 (232)
21 1oy3_D Transcription factor in 100.0 1.2E-31 4.3E-36 177.2 15.1 112 38-152 151-263 (282)
22 3b7b_A Euchromatic histone-lys 100.0 2.2E-31 7.4E-36 172.3 15.8 146 3-152 70-215 (237)
23 1k1a_A B-cell lymphoma 3-encod 100.0 5.6E-31 1.9E-35 170.6 17.7 147 3-152 72-221 (241)
24 3aji_A 26S proteasome non-ATPa 100.0 2.2E-31 7.4E-36 171.7 15.6 145 3-152 33-177 (231)
25 2rfa_A Transient receptor pote 100.0 3E-31 1E-35 171.2 16.1 151 2-152 29-202 (232)
26 1d9s_A Cyclin-dependent kinase 100.0 5.9E-32 2E-36 161.7 11.9 132 2-139 4-136 (136)
27 3v30_A DNA-binding protein rfx 100.0 1.3E-31 4.3E-36 166.0 13.5 143 3-150 29-171 (172)
28 1oy3_D Transcription factor in 100.0 1.4E-31 4.7E-36 177.0 14.2 148 3-152 38-230 (282)
29 2f8y_A Notch homolog 1, transl 100.0 7.3E-31 2.5E-35 168.4 16.6 147 2-152 50-196 (223)
30 1ihb_A P18-INK4C(INK6), cyclin 100.0 1E-31 3.4E-36 164.8 11.8 138 9-152 4-142 (162)
31 1sw6_A Regulatory protein SWI6 100.0 1.2E-31 4E-36 181.3 12.9 146 2-152 122-321 (327)
32 2dzn_A Probable 26S proteasome 100.0 6.1E-31 2.1E-35 169.3 15.6 147 5-152 31-179 (228)
33 4hbd_A KN motif and ankyrin re 100.0 8.6E-32 2.9E-36 178.2 11.9 146 3-152 104-255 (276)
34 1yyh_A HN1;, notch 1, ankyrin 100.0 3E-31 1E-35 173.4 14.2 143 6-152 53-195 (253)
35 1k1a_A B-cell lymphoma 3-encod 100.0 9.9E-31 3.4E-35 169.5 16.4 149 2-152 38-188 (241)
36 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-30 3.7E-35 171.5 16.4 148 2-152 28-204 (261)
37 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.7E-31 1.3E-35 161.4 12.6 137 10-152 2-138 (156)
38 2xai_A ASB-9, ankyrin repeat a 100.0 1.7E-30 5.7E-35 170.7 15.8 138 9-152 2-139 (261)
39 3d9h_A CDNA FLJ77766, highly s 100.0 4.8E-30 1.7E-34 170.4 16.9 143 3-152 118-260 (285)
40 2etb_A Transient receptor pote 100.0 3E-31 1E-35 173.6 10.8 144 6-152 39-226 (256)
41 3d9h_A CDNA FLJ77766, highly s 100.0 3E-30 1E-34 171.5 15.6 143 4-152 53-195 (285)
42 1n11_A Ankyrin; clathrin, BAND 100.0 2E-30 6.9E-35 181.0 15.3 146 2-152 237-382 (437)
43 3utm_A Tankyrase-1; tankyrase, 100.0 6.3E-30 2.2E-34 173.5 16.6 149 2-152 83-318 (351)
44 2vge_A RELA-associated inhibit 100.0 3.8E-31 1.3E-35 170.8 9.7 143 5-152 16-161 (229)
45 3ljn_A Hypothetical protein; a 100.0 2.5E-30 8.6E-35 176.8 13.7 108 41-151 134-248 (364)
46 3utm_A Tankyrase-1; tankyrase, 100.0 1.1E-29 3.9E-34 172.2 16.8 146 2-152 50-285 (351)
47 3hra_A Ankyrin repeat family p 100.0 6.9E-30 2.4E-34 161.6 14.6 141 8-152 3-145 (201)
48 1n0r_A 4ANK, 4 ankyrin repeats 100.0 2.9E-29 9.9E-34 147.7 15.7 126 9-139 1-126 (126)
49 2etb_A Transient receptor pote 100.0 2.1E-30 7.2E-35 169.6 11.8 142 9-152 1-177 (256)
50 3ljn_A Hypothetical protein; a 100.0 3.7E-30 1.3E-34 176.0 12.9 146 5-152 15-216 (364)
51 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.3E-29 4.6E-34 155.3 14.0 132 2-139 30-162 (162)
52 3jxi_A Vanilloid receptor-rela 100.0 1.4E-30 4.8E-35 170.7 10.0 142 8-152 44-230 (260)
53 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.8E-29 1.7E-33 154.0 16.3 131 2-137 39-169 (169)
54 1ikn_D Protein (I-kappa-B-alph 100.0 1.2E-29 4.1E-34 164.2 13.9 148 2-152 70-224 (236)
55 3f6q_A Integrin-linked protein 100.0 1.2E-29 4.1E-34 158.0 13.3 141 2-147 31-171 (179)
56 3kea_A K1L; tropism, ANK repea 100.0 4.9E-30 1.7E-34 170.5 12.1 143 2-152 23-166 (285)
57 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-29 4E-34 177.2 14.6 146 2-152 6-151 (437)
58 2jab_A H10-2-G3; HER2, darpin, 100.0 5.2E-29 1.8E-33 148.8 15.3 126 7-137 11-136 (136)
59 2pnn_A Transient receptor pote 100.0 5.7E-30 1.9E-34 169.0 12.1 144 6-152 50-238 (273)
60 4b93_B Ankyrin repeat domain-c 100.0 2.7E-30 9.3E-35 170.4 10.4 144 4-152 46-190 (269)
61 1s70_B 130 kDa myosin-binding 100.0 2E-29 6.7E-34 168.1 14.1 139 9-152 39-237 (299)
62 1ycs_B 53BP2, P53BP2; ankyrin 100.0 4E-30 1.4E-34 166.9 10.1 140 7-152 2-142 (239)
63 3eu9_A Huntingtin-interacting 100.0 5.1E-29 1.7E-33 161.1 15.1 147 2-152 1-147 (240)
64 1wdy_A 2-5A-dependent ribonucl 100.0 9.5E-29 3.3E-33 163.3 16.3 140 7-151 36-186 (285)
65 3v31_A Ankyrin repeat family A 100.0 7.7E-29 2.6E-33 152.7 13.8 135 2-141 28-162 (167)
66 2fo1_E LIN-12 protein; beta-ba 100.0 5.7E-29 2E-33 170.8 14.5 146 7-152 196-351 (373)
67 1wdy_A 2-5A-dependent ribonucl 100.0 1.9E-28 6.5E-33 161.9 16.4 143 5-152 100-258 (285)
68 2rfm_A Putative ankyrin repeat 100.0 1.7E-28 5.7E-33 154.4 15.3 131 2-137 60-190 (192)
69 3twr_A Tankyrase-2; ankyrin re 100.0 7.9E-29 2.7E-33 152.4 13.2 131 2-138 34-164 (165)
70 2fo1_E LIN-12 protein; beta-ba 100.0 4.8E-29 1.7E-33 171.2 12.9 149 2-152 158-318 (373)
71 3kea_A K1L; tropism, ANK repea 100.0 1.6E-29 5.4E-34 168.0 9.4 138 9-152 61-200 (285)
72 2pnn_A Transient receptor pote 100.0 1.2E-28 4.2E-33 162.6 12.6 142 6-152 97-272 (273)
73 3jxi_A Vanilloid receptor-rela 100.0 4.9E-29 1.7E-33 163.4 10.1 144 7-152 2-181 (260)
74 1bd8_A P19INK4D CDK4/6 inhibit 100.0 9.6E-28 3.3E-32 146.2 14.4 128 2-136 28-155 (156)
75 1awc_B Protein (GA binding pro 100.0 1.5E-27 5E-32 145.1 15.1 123 6-133 30-152 (153)
76 3t8k_A Uncharacterized protein 100.0 1.7E-29 5.6E-34 158.3 6.6 135 11-152 7-159 (186)
77 3c5r_A BARD-1, BRCA1-associate 100.0 5.8E-29 2E-33 148.7 7.8 132 2-139 3-134 (137)
78 1ycs_B 53BP2, P53BP2; ankyrin 100.0 9.3E-29 3.2E-33 160.5 9.0 134 8-146 35-171 (239)
79 3eu9_A Huntingtin-interacting 100.0 1.7E-27 5.7E-32 154.0 14.4 146 2-152 34-215 (240)
80 4g8k_A 2-5A-dependent ribonucl 100.0 1.7E-27 5.7E-32 161.4 14.8 141 10-152 25-207 (337)
81 3c5r_A BARD-1, BRCA1-associate 100.0 1.3E-27 4.3E-32 142.9 12.5 110 40-152 5-114 (137)
82 2b0o_E UPLC1; arfgap, structur 100.0 2.6E-27 8.8E-32 158.4 13.7 132 10-152 151-291 (301)
83 3ehr_A Osteoclast-stimulating 100.0 1E-28 3.6E-33 158.5 6.7 137 7-148 70-207 (222)
84 1d9s_A Cyclin-dependent kinase 100.0 9.9E-28 3.4E-32 143.3 9.9 113 36-152 3-116 (136)
85 3aaa_C Myotrophin, protein V-1 99.9 2.8E-27 9.7E-32 139.0 9.8 112 7-123 4-115 (123)
86 3lvq_E ARF-GAP with SH3 domain 99.9 2.4E-26 8.2E-31 163.0 15.8 135 10-149 132-275 (497)
87 3aaa_C Myotrophin, protein V-1 99.9 7.3E-27 2.5E-31 137.2 11.0 108 42-152 4-111 (123)
88 3t8k_A Uncharacterized protein 99.9 9.8E-28 3.3E-32 150.3 6.9 132 8-144 36-184 (186)
89 4hbd_A KN motif and ankyrin re 99.9 1.8E-26 6.1E-31 152.7 12.9 131 2-137 137-273 (276)
90 4g8k_A 2-5A-dependent ribonucl 99.9 6.5E-26 2.2E-30 153.6 14.1 135 5-143 163-302 (337)
91 1dcq_A PYK2-associated protein 99.9 1.9E-25 6.3E-30 147.9 15.6 129 11-142 131-266 (278)
92 3jue_A Arfgap with coiled-coil 99.9 5E-26 1.7E-30 155.6 12.6 138 9-151 198-341 (368)
93 2jab_A H10-2-G3; HER2, darpin, 99.9 4.7E-26 1.6E-30 135.9 10.2 108 42-152 11-118 (136)
94 2vge_A RELA-associated inhibit 99.9 1.3E-25 4.5E-30 144.9 12.4 124 26-152 1-126 (229)
95 3deo_A Signal recognition part 99.9 1.4E-25 4.8E-30 140.1 11.3 111 8-124 42-153 (183)
96 3ui2_A Signal recognition part 99.9 7.4E-26 2.5E-30 147.3 9.5 125 9-139 44-185 (244)
97 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.3E-25 1.8E-29 123.2 11.7 93 44-139 1-93 (93)
98 2l6b_A NR1C; ankyrin, consensu 99.9 5.7E-26 2E-30 131.9 8.0 109 40-151 4-112 (115)
99 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.7E-25 1.3E-29 130.0 11.4 106 44-152 1-106 (126)
100 1bi7_B P16INK4A, MTS1, multipl 99.9 9.6E-26 3.3E-30 137.5 8.6 111 38-152 5-116 (156)
101 3deo_A Signal recognition part 99.9 3.1E-25 1.1E-29 138.5 9.6 107 42-152 41-148 (183)
102 3ehr_A Osteoclast-stimulating 99.9 1.6E-25 5.6E-30 143.6 7.9 109 41-152 69-178 (222)
103 3ui2_A Signal recognition part 99.9 8.4E-25 2.9E-29 142.3 9.2 106 43-152 43-149 (244)
104 1sw6_A Regulatory protein SWI6 99.9 8.5E-25 2.9E-29 147.8 5.1 119 13-136 100-227 (327)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8.5E-23 2.9E-27 114.2 11.2 92 10-106 2-93 (93)
106 2l6b_A NR1C; ankyrin, consensu 99.9 1.8E-23 6.3E-28 121.2 8.6 109 5-118 4-112 (115)
107 2aja_A Ankyrin repeat family p 99.9 2.3E-25 7.9E-30 152.7 -0.9 129 9-138 91-223 (376)
108 2b0o_E UPLC1; arfgap, structur 99.9 9.9E-22 3.4E-26 131.4 12.6 105 45-152 151-264 (301)
109 3jue_A Arfgap with coiled-coil 99.9 3.3E-22 1.1E-26 136.7 9.9 109 41-152 195-306 (368)
110 3lvq_E ARF-GAP with SH3 domain 99.9 1.3E-21 4.5E-26 138.7 12.4 106 44-152 131-245 (497)
111 1dcq_A PYK2-associated protein 99.9 3.9E-21 1.3E-25 127.2 11.4 107 46-152 131-243 (278)
112 2zgd_A 3 repeat synthetic anky 99.9 9.1E-21 3.1E-25 109.1 10.1 93 38-133 17-109 (110)
113 2aja_A Ankyrin repeat family p 99.8 1.6E-23 5.5E-28 143.6 -4.7 125 8-145 126-256 (376)
114 2zgd_A 3 repeat synthetic anky 99.8 1.7E-19 5.7E-24 103.7 9.6 90 6-100 20-109 (110)
115 1gp8_A Protein (scaffolding pr 84.4 1.6 5.3E-05 19.2 2.9 21 12-32 15-35 (40)
116 3zrh_A Ubiquitin thioesterase 54.6 23 0.00078 25.0 4.5 51 16-66 28-90 (454)
117 3mkq_B Coatomer subunit alpha; 45.5 50 0.0017 20.2 7.4 112 10-135 8-139 (177)
118 4g26_A Pentatricopeptide repea 39.1 90 0.0031 22.3 5.9 117 12-135 31-164 (501)
119 3gvo_A Pumilio 2, pumilio homo 33.2 25 0.00084 23.8 2.1 25 78-102 214-238 (351)
120 3qil_A Clathrin heavy chain 1; 31.8 24 0.00082 20.2 1.6 28 6-33 31-58 (125)
121 3gvo_A Pumilio 2, pumilio homo 29.8 52 0.0018 22.2 3.3 52 6-57 69-121 (351)
122 2plx_B Peptide inhibitor; heli 28.6 33 0.0011 13.0 1.6 18 118-135 5-22 (26)
123 3k49_A MRNA-binding protein PU 21.0 71 0.0024 21.7 2.7 26 7-32 75-100 (369)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.8e-35 Score=181.93 Aligned_cols=136 Identities=43% Similarity=0.642 Sum_probs=112.9
Q ss_pred hHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhc
Q 031838 12 KDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASI 91 (152)
Q Consensus 12 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~ 91 (152)
+.|+.|++.|+.+.|+.|++.+ .+++.++..|.||||+|+..++.++++++++.+.+ ++.++..|.||||+|+..
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~G--advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad---~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENG--ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD---VNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc---hhhhccCCCCHHHHHHHc
Confidence 4688888888888888888876 57777888888888888888888888888887777 566777888888888888
Q ss_pred CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 92 GNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 81 g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 141 (169)
T 4gpm_A 81 GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLD 141 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 8888888888888888888888888888888888888888888888888888888888875
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-35 Score=191.88 Aligned_cols=146 Identities=31% Similarity=0.384 Sum_probs=139.6
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.||||.|+..|+.+++++|++.+ .+++.++..|.||+++|+..++.+++++|++.+.+ ++.+|..|
T Consensus 78 dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~--a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~---~n~~d~~g 152 (269)
T 4b93_B 78 GVNVTSQDGSSPLHVAALHGRADLIPLLLKHG--ANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK---PNKKDLSG 152 (269)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTC
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcC--CCcCccCCCCCCccccccccChHHHHHHHHHCCCC---CCCCCCCC
Confidence 67888999999999999999999999999987 67888899999999999999999999999999887 67788999
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 153 ~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 223 (269)
T 4b93_B 153 NTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVD 223 (269)
T ss_dssp CCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGG
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=7.1e-34 Score=175.63 Aligned_cols=136 Identities=38% Similarity=0.556 Sum_probs=125.1
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.|||+.|+..++.+.++.|++.+ .+++.++..|.||||+|+..|+.+++++|++.+.+ ++.++..|
T Consensus 29 dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g--ad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad---vn~~d~~G 103 (169)
T 4gpm_A 29 DVNASDSDGRTPLHHAAENGHKEVVKLLISKG--ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD---VNAKDSDG 103 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTS
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc--cchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC---CCCCCCCC
Confidence 78889999999999999999999999999987 67889999999999999999999999999999988 67888999
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINS 142 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~ 142 (152)
.||||+|+..|+.+++++|++.|++++.+|..|.|||++|+..++.+++++|+++|++++.
T Consensus 104 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 104 RTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999865
No 4
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1.6e-33 Score=177.29 Aligned_cols=145 Identities=26% Similarity=0.266 Sum_probs=137.2
Q ss_pred cCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCC
Q 031838 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (152)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (152)
++..+..|.|+|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~ 102 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENF--DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN---VNTKDFSGK 102 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHH--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTSC
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhc--cccccccccCccHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCC
Confidence 4667889999999999999999999999987 57788899999999999999999999999999887 677788999
Q ss_pred hhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 83 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 172 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEA 172 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 5
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=3.2e-33 Score=172.10 Aligned_cols=143 Identities=34% Similarity=0.429 Sum_probs=132.8
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhh
Q 031838 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l 85 (152)
.+..+.++|+.|++.|+.+.+++|++.+ ...+...+..|.||||+|+..++.+++++|++.+.+ ++.++..|.|||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L 79 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD---VHAKDKGGLVPL 79 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC---CCccCCCCCCHH
Confidence 4667889999999999999999999865 366777888899999999999999999999999887 677788999999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 86 HSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 86 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|+|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 146 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLD 146 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGG
T ss_pred HHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhH
Confidence 9999999999999999999999999999999999999999999999999999999999999999986
No 6
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=9.8e-33 Score=170.20 Aligned_cols=139 Identities=25% Similarity=0.285 Sum_probs=131.4
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a 88 (152)
.+.|+|+.|+..|+.+.+++|++.+ ..++.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||.|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A 76 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD---PQLLGKGRESALSLA 76 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC---CCCcCCCCCcHHHHH
Confidence 4689999999999999999999987 67888999999999999999999999999998877 667788999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 89 ASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 140 (167)
T 3v31_A 77 CSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMD 140 (167)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999985
No 7
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=3.3e-32 Score=169.65 Aligned_cols=141 Identities=28% Similarity=0.361 Sum_probs=129.9
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHH
Q 031838 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (152)
Q Consensus 8 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~ 87 (152)
..+.++|+.|+..|+.+.+++|++.+ +..++.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR---INVMNRGDDTPLHL 78 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC---CCCcCCCCCCHHHH
Confidence 34678999999999999999999985 367888999999999999999999999999999887 67778899999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 88 AASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 88 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 143 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVD 143 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGG
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 8
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2.3e-32 Score=168.94 Aligned_cols=141 Identities=39% Similarity=0.554 Sum_probs=131.6
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhH
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~ 86 (152)
...+.++|+.|++.|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANG--ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD---VNAVDHAGMTPLR 85 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHH
Confidence 345678999999999999999999987 67888899999999999999999999999998877 6777889999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 87 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 151 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFD 151 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999985
No 9
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.4e-32 Score=176.93 Aligned_cols=149 Identities=29% Similarity=0.342 Sum_probs=136.7
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC---ccccccC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESA---NVVNAVD 78 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~---~~~~~~~ 78 (152)
+++..+..|.|||+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|+..+... ...+..+
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAG--CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC--CCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCC
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccC
Confidence 57778889999999999999999999999987 678888999999999999999999999999987642 2246667
Q ss_pred CCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 79 EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKND-GGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 79 ~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
..|.||||+|+..++.+++++|++.|++++..+. .|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 115 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 189 (236)
T 1ikn_D 115 YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 189 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHH
Confidence 8899999999999999999999999999999987 8999999999999999999999999999999999999986
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.6e-32 Score=174.14 Aligned_cols=146 Identities=27% Similarity=0.320 Sum_probs=103.1
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.|||+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ .+..+..|
T Consensus 65 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g 139 (231)
T 3aji_A 65 PVNDKDDAGWSPLHIAASAGXDEIVKALLVKG--AHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN---PDAKDHYD 139 (231)
T ss_dssp CSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTS
T ss_pred CCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCC
Confidence 44555566666666666666666666666665 45556666667777777777777777777766655 45556667
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||.|+..++.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++.++..|.||||
T Consensus 140 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 210 (231)
T 3aji_A 140 ATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQ 210 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777777764
No 11
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7.5e-32 Score=173.51 Aligned_cols=144 Identities=26% Similarity=0.302 Sum_probs=115.5
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhh
Q 031838 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l 85 (152)
.+..|.++|+.|+..|+.+++++|++.+...+++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.|||
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L 144 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS---VRIKDKFNQIPL 144 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC---ccccCCCCCCHH
Confidence 45667788888888888888888877764456677777788888888888888888888877766 566677888888
Q ss_pred HHHHhcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCCCCccccccccCC
Q 031838 86 HSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLI-SRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 86 ~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll-~~g~~~~~~~~~~~t~l~ 152 (152)
|+|+..++.+++++|++.| .+++.++..|.|||++|+..++.+++++|+ ++|++++.+|..|.||||
T Consensus 145 ~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~ 213 (228)
T 2dzn_A 145 HRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAED 213 (228)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGG
T ss_pred HHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHH
Confidence 8888888888888888887 888888888888888888888888888888 788888888888888875
No 12
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=3.5e-32 Score=168.43 Aligned_cols=138 Identities=23% Similarity=0.299 Sum_probs=91.9
Q ss_pred ChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHh
Q 031838 11 DKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAAS 90 (152)
Q Consensus 11 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~ 90 (152)
.++|+.|+..|+.+.+++|++.+ ...++.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKG-DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD---PHILAKERESALSLAST 78 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTC-SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTCCCHHHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcC-cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---chhhcccCCCHHHHHHH
Confidence 35667777777777777766665 233556666666777777777777777777666655 45555666677777777
Q ss_pred cCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 91 IGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 91 ~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 140 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMD 140 (172)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 77777777777666666666666667777777777777777777777777666666766654
No 13
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-31 Score=178.51 Aligned_cols=149 Identities=24% Similarity=0.344 Sum_probs=135.0
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcccc------
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVN------ 75 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~------ 75 (152)
|++..+..|.||||.|+..|+.+++++|++.+ .+++.++..|.||||+|+..|+.+++++|++.+.+....+
T Consensus 65 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 142 (299)
T 1s70_B 65 DINYANVDGLTALHQACIDDNVDMVKFLVENG--ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTP 142 (299)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCH
Confidence 67778889999999999999999999999987 6788889999999999999999999999999877643211
Q ss_pred ---------------------------------------------------ccCCCCChhhHHHHhcCCHHHHHHHHHcC
Q 031838 76 ---------------------------------------------------AVDEEGWAPIHSAASIGNVTIVEMLLSKG 104 (152)
Q Consensus 76 ---------------------------------------------------~~~~~~~t~l~~a~~~~~~~~~~~l~~~~ 104 (152)
..+..|.||||+|+..|+.+++++|++.|
T Consensus 143 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 222 (299)
T 1s70_B 143 LDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222 (299)
T ss_dssp HHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence 12346889999999999999999999999
Q ss_pred CCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 105 ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 105 ~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 223 ~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 270 (299)
T 1s70_B 223 YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFD 270 (299)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTT
T ss_pred CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 999999999999999999999999999999999999999999999997
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.2e-32 Score=177.54 Aligned_cols=147 Identities=27% Similarity=0.355 Sum_probs=102.8
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.|+|+.|+..|+.+++++|++.+ ...++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g 157 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNR-ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD---VNAVDDLG 157 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHST-TSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC---TTCBCTTS
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC---CCCcCCCC
Confidence 34455555666666666666666666666654 134555566666666666666666666666666555 55566777
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||+|+..++.+++++|++.|++++..+..|.|||++|+..++.+++++|+++|++++.++..|+||||
T Consensus 158 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 228 (253)
T 1yyh_A 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD 228 (253)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHH
Confidence 77888888778888888888777777777777788888888888888888888888888778888887764
No 15
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=7e-32 Score=164.25 Aligned_cols=136 Identities=35% Similarity=0.495 Sum_probs=127.1
Q ss_pred ChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHh
Q 031838 11 DKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAAS 90 (152)
Q Consensus 11 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~ 90 (152)
.++|+.|++.|+.+.+++|++.+. .++ .+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~--~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGA--PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS---RDARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTC--CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC---TTCCCTTCCCHHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCC--CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHH
Confidence 579999999999999999999874 333 577899999999999999999999998877 67778899999999999
Q ss_pred cCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 91 IGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 91 ~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.++.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 77 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 138 (153)
T 1awc_B 77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFD 138 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 16
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=8.7e-32 Score=170.30 Aligned_cols=146 Identities=26% Similarity=0.305 Sum_probs=134.5
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCC-CCccccccCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDE-SANVVNAVDEE 80 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~ 80 (152)
|++..+..|.|||+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|+..+. + .+..+..
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~~ 105 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG--ADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPD---LNKHNRY 105 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC---TTCCCTT
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcc---cccccCC
Confidence 67778889999999999999999999999987 6788889999999999999999999999995543 4 6777889
Q ss_pred CChhhHHHHhcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCC-----HHHHHHHHhcCCCCCCccccccccCC
Q 031838 81 GWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGW-----LKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~~pl~~a~~~~~-----~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|.||||.|+..++.+++++|++.| .+++.++..|.||||+|+..+. .+++++|+++|++++.++..|+||||
T Consensus 106 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 183 (201)
T 3hra_A 106 GGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMD 183 (201)
T ss_dssp SCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHH
Confidence 999999999999999999999998 8999999999999999999988 89999999999999999999999985
No 17
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=100.00 E-value=7.7e-33 Score=169.07 Aligned_cols=143 Identities=20% Similarity=0.233 Sum_probs=117.4
Q ss_pred CcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCCh
Q 031838 4 DIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWA 83 (152)
Q Consensus 4 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t 83 (152)
+..+..+.++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+ .++.+++++|++.+.+ ++.++..|.|
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~---~~~~d~~g~t 79 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE---PNCADPATLT 79 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC---CCCCCTTTCC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC---CCCcCCCCCc
Confidence 345667899999999999999999999987 678888999999999985 8999999999998877 6778889998
Q ss_pred -hhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 84 -PIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 84 -~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|||+|+..++.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++.++..|.||.+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999864
No 18
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2e-31 Score=171.10 Aligned_cols=141 Identities=26% Similarity=0.326 Sum_probs=68.2
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhH
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~ 86 (152)
+..|.|+|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+... .+..+..|.||||
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~~g~t~L~ 97 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD--LDARMHDGTTPLI 97 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSC--TTCCCTTCCCHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCcHHH
Confidence 344555555555555555555555544 344444555555555555555555555555443311 2333344444444
Q ss_pred HHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccC
Q 031838 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLY 151 (152)
Q Consensus 87 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l 151 (152)
.|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||
T Consensus 98 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 162 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPL 162 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred HHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHH
Confidence 44444444444444444444444444444444444444444444444444444444444444444
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.3e-31 Score=172.21 Aligned_cols=147 Identities=33% Similarity=0.478 Sum_probs=99.4
Q ss_pred CCcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCC
Q 031838 1 MDMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEE 80 (152)
Q Consensus 1 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (152)
+|++.++..|.|+|+.|+..|+.+.+++|++.+ .+++..+..|.||||+|+..++.+++++|++.+.+ .+..+..
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~ 76 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAG--ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL---VDPKDAE 76 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---CCCCCTT
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcC--CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC---CCCCCCC
Confidence 467777777888888888888888888887776 45666677777777777777777777777776655 4445556
Q ss_pred CChhhHHHHhcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 81 GWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|.||||.|+..++.+++++|++.+ .+++..+..|.||+++|+..++.+++++|+++|++++.++..|.||||
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 149 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLH 149 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHH
Confidence 666666666666666666666665 555555556666666666666666666666666666666666666553
No 20
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.1e-31 Score=173.21 Aligned_cols=143 Identities=29% Similarity=0.351 Sum_probs=128.0
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcc--ccccCCCCChhhH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANV--VNAVDEEGWAPIH 86 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~--~~~~~~~~~t~l~ 86 (152)
.|.|+|+.|+..|+.+.+++|++.. +.+++.++..|.||||+|+..|+.+++++|++.+.+... .+..+..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 5889999999999999999999973 367888999999999999999999999999998776321 1455678999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCcccCC-------------CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 87 SAASIGNVTIVEMLLSKGADVNLKND-------------GGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 87 ~a~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+|+..++.+++++|++.|++++..+. .|.||||+|+..++.+++++|+++|++++.+|..|+||||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 159 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLH 159 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 99999999999999999999888755 6999999999999999999999999999999999999986
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.2e-31 Score=177.21 Aligned_cols=112 Identities=29% Similarity=0.320 Sum_probs=89.9
Q ss_pred cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCC-CCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCc
Q 031838 38 LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDE-EGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRT 116 (152)
Q Consensus 38 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 116 (152)
++.++..|.||||+|+..++.+++++|++.+.+ ++..+. .|.||||+|+..++.+++++|++.|++++.++..|.|
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 227 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD---LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRT 227 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Confidence 455677788899999988889999988888877 455553 4889999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 117 ALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 117 pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||++|+..++.+++++|+++|++++.++..|.|||+
T Consensus 228 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 263 (282)
T 1oy3_D 228 PLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCS 263 (282)
T ss_dssp HHHHHHTSSCHHHHHHHHHTTCCCCCCC--------
T ss_pred HHHHHHHcCCcHHHHHHHHcCCCcCcCCCccccccc
Confidence 999999999999999999999999999999999985
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.98 E-value=2.2e-31 Score=172.34 Aligned_cols=146 Identities=27% Similarity=0.305 Sum_probs=105.2
Q ss_pred cCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCC
Q 031838 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (152)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (152)
++..+..|.++|+.|+..|+.+++++|++.+ ...++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.
T Consensus 70 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~ 145 (237)
T 3b7b_A 70 VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG-QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD---INIRDNEEN 145 (237)
T ss_dssp CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT-CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSC
T ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCccCCCCC
Confidence 4445556666666666666666666666654 234555666677777777777777777777766665 455666777
Q ss_pred hhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 83 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||||.|+..++.+++++|++.|++++..+..|.|||++|+..++.+++++|+++|++++.+|..|+||||
T Consensus 146 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 215 (237)
T 3b7b_A 146 ICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQ 215 (237)
T ss_dssp CHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHH
Confidence 7888887777888888887777777777777888888888888888888888888888888888888764
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.98 E-value=5.6e-31 Score=170.62 Aligned_cols=147 Identities=28% Similarity=0.360 Sum_probs=106.9
Q ss_pred cCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcc--cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccC-C
Q 031838 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLL--KSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVD-E 79 (152)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~ 79 (152)
++..+..|.+||+.|+..|+.+++++|++.+.. ..++..+..|.||||+|+..++.+++++|++.+.+ .+..+ .
T Consensus 72 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~ 148 (241)
T 1k1a_A 72 PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD---IDAVDIK 148 (241)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTT
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC---ccccccc
Confidence 344455556666666666666666666655421 14455566666777777777777777777766655 44445 5
Q ss_pred CCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 80 EGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 80 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.|.||||.|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|+||||
T Consensus 149 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 221 (241)
T 1k1a_A 149 SGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLM 221 (241)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHH
Confidence 6888888888888888888888888888888888888888888888888888888888888888888888886
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.98 E-value=2.2e-31 Score=171.74 Aligned_cols=145 Identities=32% Similarity=0.388 Sum_probs=129.7
Q ss_pred cCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCC
Q 031838 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (152)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (152)
++..+..|.|+|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~ 107 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLG--VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH---VNAVNQNGC 107 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSC
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhC--CCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC---CCCCCCCCC
Confidence 3456778899999999999999999999886 57778888899999999999999999999988877 667778899
Q ss_pred hhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 83 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||||.|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 108 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 177 (231)
T 3aji_A 108 TPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLH 177 (231)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 25
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=3e-31 Score=171.23 Aligned_cols=151 Identities=20% Similarity=0.198 Sum_probs=132.5
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccc---cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccc--
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKS---LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNA-- 76 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-- 76 (152)
|++..+..|.|||+.|+..|+.+++++|++.+.... .+.++..|.||||+|+..++.+++++|++.+.+......
T Consensus 29 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 108 (232)
T 2rfa_A 29 EVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGS 108 (232)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSG
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCc
Confidence 677888899999999999999999999999873221 256778899999999999999999999999887432211
Q ss_pred --------cCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH----HHHHhcCCCC----
Q 031838 77 --------VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIV----ELLISRGAKI---- 140 (152)
Q Consensus 77 --------~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~----~~Ll~~g~~~---- 140 (152)
.+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++ ++|+++|++.
T Consensus 109 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~ 188 (232)
T 2rfa_A 109 VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKS 188 (232)
T ss_dssp GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCC
T ss_pred ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhh
Confidence 123799999999999999999999999999999999999999999999999988 9999999988
Q ss_pred --CCccccccccCC
Q 031838 141 --NSKDKACNFLYQ 152 (152)
Q Consensus 141 --~~~~~~~~t~l~ 152 (152)
+.++..|+||||
T Consensus 189 ~~~~~~~~g~tpl~ 202 (232)
T 2rfa_A 189 LELVPNNQGLTPFK 202 (232)
T ss_dssp GGGCCCTTSCCHHH
T ss_pred hhccCCCCCCCHHH
Confidence 589999999985
No 26
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.98 E-value=5.9e-32 Score=161.67 Aligned_cols=132 Identities=23% Similarity=0.275 Sum_probs=125.1
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCC-
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEE- 80 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~- 80 (152)
|++..+..+.++|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+. ++.+++++|++.+.+ ++.++..
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~---~~~~~~~~ 77 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE---PNCADPAT 77 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC---SSCCBTTT
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC---CCCcCCCC
Confidence 67888999999999999999999999999987 6788889999999999999 999999999999888 6777888
Q ss_pred CChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 031838 81 GWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK 139 (152)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~ 139 (152)
|.||||+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999985
No 27
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=1.3e-31 Score=165.95 Aligned_cols=143 Identities=22% Similarity=0.272 Sum_probs=128.9
Q ss_pred cCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCC
Q 031838 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (152)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (152)
++..+..|.|+|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~ 103 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWG--ADPHILAKERESALSLASTGGYTDIVGLLLERDVD---INIYDWNGG 103 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCTTSC
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC---CCCCCCCCC
Confidence 5667888999999999999999999999987 67888899999999999999999999999998887 677788999
Q ss_pred hhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCcccccccc
Q 031838 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFL 150 (152)
Q Consensus 83 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~ 150 (152)
||||+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|+++..++..|.||
T Consensus 104 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 104 TPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999887
No 28
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.98 E-value=1.4e-31 Score=177.03 Aligned_cols=148 Identities=25% Similarity=0.329 Sum_probs=113.7
Q ss_pred cCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCc----------
Q 031838 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESAN---------- 72 (152)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~---------- 72 (152)
++..+..|.||||.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|+..+....
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAG--AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ 115 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhc
Confidence 4555666777777777777777777777765 4566666677777777777777777777766543210
Q ss_pred ----------------------------------cccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCC-CCCcH
Q 031838 73 ----------------------------------VVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKND-GGRTA 117 (152)
Q Consensus 73 ----------------------------------~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~~p 117 (152)
.++..+..|.||||+|+..++.+++++|++.|++++..+. .|.||
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tp 195 (282)
T 1oy3_D 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP 195 (282)
T ss_dssp ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred ccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCH
Confidence 1344566788999999999999999999999999888875 48999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 118 LHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 118 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||+|+..++.+++++|+++|++++.++..|+||||
T Consensus 196 L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 196 LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLG 230 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHH
Confidence 99999999999999999999999999999999985
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=7.3e-31 Score=168.44 Aligned_cols=147 Identities=27% Similarity=0.355 Sum_probs=137.9
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.+||+.|+..|+.+++++|++.+ ...++..+..|.||||+|+..++.+++++|++.+.+ ++..+..|
T Consensus 50 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g 125 (223)
T 2f8y_A 50 DANIQDNMGRTPLHAAVSADAQGVFQILIRNR-ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD---VNAVDDLG 125 (223)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT-TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTS
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC---CcCcCCCC
Confidence 56777889999999999999999999999986 247788889999999999999999999999998877 67778899
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++++.++..|.||||
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 196 (223)
T 2f8y_A 126 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD 196 (223)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985
No 30
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.98 E-value=1e-31 Score=164.81 Aligned_cols=138 Identities=30% Similarity=0.443 Sum_probs=125.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a 88 (152)
...++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+. ++.+++++|++.+.+ ++.++..|.||||.|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN---PDLKDRTGFAVIHDA 77 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC---TTCCCTTSCCHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC---CCCCCCCCCCHHHHH
Confidence 4568999999999999999999876 6778888999999999998 999999999998877 667788999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCCccccccccCC
Q 031838 89 ASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK-INSKDKACNFLYQ 152 (152)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~-~~~~~~~~~t~l~ 152 (152)
+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++ ++.++..|.||||
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~ 142 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACD 142 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHH
Confidence 999999999999999999999999999999999999999999999999998 5899999999985
No 31
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=1.2e-31 Score=181.33 Aligned_cols=146 Identities=18% Similarity=0.144 Sum_probs=131.6
Q ss_pred CcCc-CCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCC---HHHHHHHHhcC-CCCccccc
Q 031838 2 DMDI-DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGH---PEVVEILLSVD-ESANVVNA 76 (152)
Q Consensus 2 ~~~~-~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~ll~~~-~~~~~~~~ 76 (152)
|++. .+..|.||||.|+..|+.++|++|++.+ .+++.++..|.||||+|+..|+ .++++.++..+ .+ ++.
T Consensus 122 dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G--ad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~---~~~ 196 (327)
T 1sw6_A 122 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG--SNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC---LIL 196 (327)
T ss_dssp CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG---GGE
T ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc---ccC
Confidence 6777 7889999999999999999999999987 6888999999999999999998 67777777765 33 677
Q ss_pred cCCCCChhhHHHHh----cCCHHHHHHHHHcCC---------------------------------------------CC
Q 031838 77 VDEEGWAPIHSAAS----IGNVTIVEMLLSKGA---------------------------------------------DV 107 (152)
Q Consensus 77 ~~~~~~t~l~~a~~----~~~~~~~~~l~~~~~---------------------------------------------~~ 107 (152)
++..|.||||+|+. .++.+++++|++.+. ++
T Consensus 197 ~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~ 276 (327)
T 1sw6_A 197 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANML 276 (327)
T ss_dssp ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCC
Confidence 88999999999999 899999999987632 47
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 108 NLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 108 ~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 277 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 321 (327)
T 1sw6_A 277 NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 321 (327)
T ss_dssp TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 778889999999999999999999999999999999999999997
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=6.1e-31 Score=169.26 Aligned_cols=147 Identities=25% Similarity=0.255 Sum_probs=128.5
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHHhhccccccc-CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCCh
Q 031838 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSL-RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWA 83 (152)
Q Consensus 5 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t 83 (152)
..+..|.|+|+.|+..|+.+++++|++.+...++.. .+..|.||||+|+..++.+++++|++.+.... ++..+..|.|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t 109 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVT 109 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCC
Confidence 356778999999999999999999999874455555 77889999999999999999999998872222 6677888999
Q ss_pred hhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCccccccccCC
Q 031838 84 PIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG-AKINSKDKACNFLYQ 152 (152)
Q Consensus 84 ~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~l~ 152 (152)
|||.|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|+++| ++++.++..|+||||
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~ 179 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLF 179 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHH
T ss_pred HHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHH
Confidence 999999999999999999999999999999999999999999999999999999 999999999999985
No 33
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=8.6e-32 Score=178.17 Aligned_cols=146 Identities=22% Similarity=0.285 Sum_probs=135.8
Q ss_pred cCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHH-----HcCCHHHHHHHHhcCCCCcccccc
Q 031838 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAA-----SCGHPEVVEILLSVDESANVVNAV 77 (152)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~ 77 (152)
++..+..|.||||.|+..|+.+++++|++.+. .+++..+..|.||||+|+ ..++.+++++++..+.. .+..
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~---~~~~ 179 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGV-CKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI---NAKA 179 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSC-CCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT---TCCC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC---cccc
Confidence 67788999999999999999999999999872 378889999999999999 66789999999998866 5666
Q ss_pred CCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCccccccccCC
Q 031838 78 DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLIS-RGAKINSKDKACNFLYQ 152 (152)
Q Consensus 78 ~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~ 152 (152)
+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALM 255 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHH
Confidence 7889999999999999999999999999999999999999999999999999999999 89999999999999985
No 34
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=3e-31 Score=173.44 Aligned_cols=143 Identities=25% Similarity=0.316 Sum_probs=134.1
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhh
Q 031838 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l 85 (152)
.+..|.|+|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|+..+... .+..+..|.|||
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~~g~t~L 128 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD--LDARMHDGTTPL 128 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC--TTCCCTTCCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--ccccCCCCCcHH
Confidence 4678999999999999999999999987 678888999999999999999999999999887622 677788999999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 86 HSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 86 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|+|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 129 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195 (253)
T ss_dssp HHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999986
No 35
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=9.9e-31 Score=169.47 Aligned_cols=149 Identities=23% Similarity=0.333 Sum_probs=120.2
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCc-cccccCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESAN-VVNAVDEE 80 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~~~~ 80 (152)
+++..+..|.|||+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++++..+.... ..+..+..
T Consensus 38 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 115 (241)
T 1k1a_A 38 ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG--ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYD 115 (241)
T ss_dssp CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTT
T ss_pred CCCcccccCCCHHHHHHHcCCHHHHHHHHHcC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcC
Confidence 45666777888888888888888888888776 5666777778888888888888888888887765211 14566778
Q ss_pred CChhhHHHHhcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 81 GWAPIHSAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|.||||.|+..++.+++++|++.|++++..+ ..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 116 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 188 (241)
T 1k1a_A 116 GLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 188 (241)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 8888888888888888888888888888877 67889999999999999999999999999999999999875
No 36
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=171.55 Aligned_cols=148 Identities=24% Similarity=0.208 Sum_probs=92.2
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcc--------
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANV-------- 73 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~-------- 73 (152)
|++..+..|.|+||.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+...
T Consensus 28 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L 105 (261)
T 2xai_A 28 AVNIITADHVSPLHEACLGGHLSCVKILLKHG--AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPI 105 (261)
T ss_dssp CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHH
Confidence 34444555555555555555555555555544 34444444455555555555555555444444433210
Q ss_pred ---------------------ccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHH
Q 031838 74 ---------------------VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVEL 132 (152)
Q Consensus 74 ---------------------~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~ 132 (152)
++..+..|.||||+|+..++.+++++|++.|++++. +..|.||||+|+..++.+++++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~ 184 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACL 184 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHH
Confidence 445566677777777777777777777777777764 5667777777777777788888
Q ss_pred HHhcCCCCCCccccccccCC
Q 031838 133 LISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 133 Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|+++|++++.+|..|+||||
T Consensus 185 Ll~~gad~~~~d~~g~tpl~ 204 (261)
T 2xai_A 185 LMDFGADTQAKNAEGKRPVE 204 (261)
T ss_dssp HHHTTCCTTCCCTTSCCGGG
T ss_pred HHHcCCCCCCcCCCCCChhh
Confidence 88888888888888888775
No 37
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=3.7e-31 Score=161.38 Aligned_cols=137 Identities=26% Similarity=0.359 Sum_probs=128.5
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHH
Q 031838 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAA 89 (152)
Q Consensus 10 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~ 89 (152)
+.++|+.|+..|+.+.+++|++. ...+++..+..|.||||+ +..++.+++++|++.+.+ ++.++..|.||||.|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS---PNVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHH
Confidence 46899999999999999999998 346788899999999999 999999999999999887 6777889999999999
Q ss_pred hcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 90 SIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
..++.+++++|++.|++++.++..|.||||+|+..++.+++++|+++ ++++.++..|.||||
T Consensus 77 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~ 138 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLE 138 (156)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHH
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999 999999999999985
No 38
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=170.68 Aligned_cols=138 Identities=27% Similarity=0.332 Sum_probs=124.4
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a 88 (152)
.|.|+||.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A 76 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHTPLFNA 76 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHH
Confidence 4789999999999999999999987 67888999999999999999999999999999877 677788999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 89 ASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+..++.+++++|++.|++++.. ..|.||+++|+..++.+++++|+++|++++..+..|.||||
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 139 (261)
T 2xai_A 77 CVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLY 139 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHH
Confidence 9999999999999999888754 45889999999999999999999999999999999999885
No 39
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=4.8e-30 Score=170.45 Aligned_cols=143 Identities=23% Similarity=0.235 Sum_probs=93.4
Q ss_pred cCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCC
Q 031838 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (152)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (152)
++..+..|.|||+.|+..|+.+++++|++.+ ..++.. ..|.||||+|+..++.+++++|++.+.+ ++.++..|.
T Consensus 118 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~d~~g~ 191 (285)
T 3d9h_A 118 VNGVTADWHTPLFNACVSGSWDCVNLLLQHG--ASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGN---IDHKISHLG 191 (285)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCSSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCC---TTCCBTTTB
T ss_pred CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCC--CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCC
Confidence 3344444455555555555555555555443 222221 2255555555555555555555555544 455667777
Q ss_pred hhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 83 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||||+|+..++.+++++|++.|++++. +..|.|||++|+..++.+++++|+++|++++.+|..|+||||
T Consensus 192 t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 260 (285)
T 3d9h_A 192 TPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVE 260 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred CHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 888888888888888888888777774 667788888888888888888888888888888888888875
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=3e-31 Score=173.59 Aligned_cols=144 Identities=18% Similarity=0.173 Sum_probs=128.4
Q ss_pred CCCCCChHHHHHHHh---CCHHHHHHHHHhhcccc---------cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 031838 6 DQTIKDKDLFKAAET---GDSSTFKSLSKQQLLKS---------LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANV 73 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~---------~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~ 73 (152)
.+..|.||||.|+.. |+.+++++|++.+.... ...++..|.||||+|+..|+.+++++|++.+.+
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--- 115 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD--- 115 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC---
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC---
Confidence 688899999999999 99999999999873222 112346799999999999999999999999887
Q ss_pred ccccCCC-------------CChhhHHHHhcCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHH--cCCHH-------
Q 031838 74 VNAVDEE-------------GWAPIHSAASIGNVTIVEMLLS---KGADVNLKNDGGRTALHYAAS--KGWLK------- 128 (152)
Q Consensus 74 ~~~~~~~-------------~~t~l~~a~~~~~~~~~~~l~~---~~~~~~~~~~~~~~pl~~a~~--~~~~~------- 128 (152)
++..+.. |.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+. .++.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~ 195 (256)
T 2etb_A 116 VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIH 195 (256)
T ss_dssp TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHH
T ss_pred CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHH
Confidence 4555554 9999999999999999999999 999999999999999999999 78888
Q ss_pred HHHHHHhcCCCC-------CCccccccccCC
Q 031838 129 IVELLISRGAKI-------NSKDKACNFLYQ 152 (152)
Q Consensus 129 ~~~~Ll~~g~~~-------~~~~~~~~t~l~ 152 (152)
++++|+++|+++ +.+|..|+||||
T Consensus 196 iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 196 MYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp HHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred HHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 999999999999 899999999986
No 41
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=3e-30 Score=171.48 Aligned_cols=143 Identities=27% Similarity=0.314 Sum_probs=88.2
Q ss_pred CcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCCh
Q 031838 4 DIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWA 83 (152)
Q Consensus 4 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t 83 (152)
+.++..|.|+|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..|+.+++++|++.+.+ ++.++..|.|
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~t 127 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHT 127 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTT--CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SSCCCTTCCC
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC---CCCCCCCCCC
Confidence 344555666677777777766666666655 45556666666666666666666666666666555 4455556666
Q ss_pred hhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 84 PIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 84 ~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|||+|+..++.+++++|++.|++++..+ .|.|||++|+..++.+++++|+++|++++.++..|.||||
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 195 (285)
T 3d9h_A 128 PLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLY 195 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHH
T ss_pred HHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 6666666666666666666665555432 3556666666666666666666666666666666666553
No 42
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=2e-30 Score=180.98 Aligned_cols=146 Identities=31% Similarity=0.412 Sum_probs=128.3
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.+||+.|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 237 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g 311 (437)
T 1n11_A 237 SANAESVQGVTPLHLAAQEGHAEMVALLLSKQ--ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM---VDATTRMG 311 (437)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCCCSSC
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc---CCCCCCCC
Confidence 45666777888888888888888888888876 56677788888999999999999999999888777 66778889
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.++..|+|||+
T Consensus 312 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~ 382 (437)
T 1n11_A 312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLA 382 (437)
T ss_dssp CCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999974
No 43
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=6.3e-30 Score=173.47 Aligned_cols=149 Identities=28% Similarity=0.263 Sum_probs=94.2
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcc--------
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANV-------- 73 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~-------- 73 (152)
|++..+..|.||||.|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|++.+.+...
T Consensus 83 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~ 160 (351)
T 3utm_A 83 DVHAKDKGGLVPLHNACSYGHYEVTELLLKHG--ACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSA 160 (351)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCccCCCCCcHHHHHHHCCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcc
Confidence 44555556666666666666666666666654 45555666666666666666666666666665443211
Q ss_pred -------------------------------------------------------------------------------c
Q 031838 74 -------------------------------------------------------------------------------V 74 (152)
Q Consensus 74 -------------------------------------------------------------------------------~ 74 (152)
+
T Consensus 161 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~ 240 (351)
T 3utm_A 161 VDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240 (351)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT
T ss_pred hHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc
Confidence 2
Q ss_pred cccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 75 NAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 75 ~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.||+|
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~ 318 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQ 318 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhh
Confidence 334455666666666666666666666666666666666666666666666666666666666666666666666653
No 44
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=170.79 Aligned_cols=143 Identities=23% Similarity=0.318 Sum_probs=131.2
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChh
Q 031838 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAP 84 (152)
Q Consensus 5 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~ 84 (152)
..+..+.++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.||
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~---~n~~d~~g~tp 90 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEM--NDPSQPNEEGITALHNAICGANYSIVDFLITAGAN---VNSPDSHGWTP 90 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCH
Confidence 34456778999999999999999999987 57888999999999999999999999999999887 67788899999
Q ss_pred hHHHHhcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHH--HHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 85 IHSAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHYA--ASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 85 l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~~pl~~a--~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||+|+..|+.+++++|++.|++++..+ ..|.|||++| +..++.+++++|+++|++++..+..|.||++
T Consensus 91 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 91 LHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence 999999999999999999999999986 6999999999 9999999999999999999888888888764
No 45
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=2.5e-30 Score=176.83 Aligned_cols=108 Identities=20% Similarity=0.364 Sum_probs=59.2
Q ss_pred CCCCCchHHHHHHHcC--CHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCC-----CcccCCC
Q 031838 41 RNDDDRTLLHVAASCG--HPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGAD-----VNLKNDG 113 (152)
Q Consensus 41 ~~~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~-----~~~~~~~ 113 (152)
++..|.||||+|+..| +.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|++ ++..+..
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~---~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 210 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGAS---PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ 210 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTT
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCC
Confidence 3344555555555555 55555555555444 344445555555555555555555555555554 5555555
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccC
Q 031838 114 GRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLY 151 (152)
Q Consensus 114 ~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l 151 (152)
|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus 211 g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 248 (364)
T 3ljn_A 211 GNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPL 248 (364)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 55555555555555555555555555555555555555
No 46
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.1e-29 Score=172.20 Aligned_cols=146 Identities=32% Similarity=0.378 Sum_probs=124.4
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.||||.|+..|+.+++++|++.+ .+++.++..|.||||+|+..|+.+++++|++.+.+ ++..+..|
T Consensus 50 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~---~~~~~~~g 124 (351)
T 3utm_A 50 NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG--ADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC---VNAMDLWQ 124 (351)
T ss_dssp TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTC
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCC
Confidence 56777888999999999999999999999987 67888899999999999999999999999999887 66677889
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCC------------------------------------------------------
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADV------------------------------------------------------ 107 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~------------------------------------------------------ 107 (152)
.||||+|+..++.+++++|++.|+++
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 204 (351)
T 3utm_A 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc
Confidence 99999999988888888777765543
Q ss_pred ------------------------------------cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccC
Q 031838 108 ------------------------------------NLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLY 151 (152)
Q Consensus 108 ------------------------------------~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l 151 (152)
+.++..|.||||+|+..++.+++++|+++|++++.++..|+|||
T Consensus 205 ~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L 284 (351)
T 3utm_A 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTAL 284 (351)
T ss_dssp CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 34556677888888888888888888888888888888888887
Q ss_pred C
Q 031838 152 Q 152 (152)
Q Consensus 152 ~ 152 (152)
|
T Consensus 285 ~ 285 (351)
T 3utm_A 285 H 285 (351)
T ss_dssp H
T ss_pred H
Confidence 5
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=6.9e-30 Score=161.55 Aligned_cols=141 Identities=23% Similarity=0.275 Sum_probs=131.4
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHH
Q 031838 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (152)
Q Consensus 8 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~ 87 (152)
..+.++|+.|+..|+.+.+++++..+ ..+++..+..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD---INLQNSISDSPYLY 78 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHH
Confidence 46789999999999999999999986 357888999999999999999999999999999887 67778899999999
Q ss_pred HHhcCCHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCccccccccCC
Q 031838 88 AASIGNVTIVEMLL-SKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG-AKINSKDKACNFLYQ 152 (152)
Q Consensus 88 a~~~~~~~~~~~l~-~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~l~ 152 (152)
|+..++.+++++|+ ..+.+++..+..|.|||++|+..++.+++++|+++| ++++.++..|.||||
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 145 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALI 145 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHH
Confidence 99999999999999 557899999999999999999999999999999999 999999999999986
No 48
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.97 E-value=2.9e-29 Score=147.67 Aligned_cols=126 Identities=41% Similarity=0.606 Sum_probs=118.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a 88 (152)
.|.|+|+.|+..|+.+++++|++.+ ..++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||.|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC---CcccCCCCCcHHHHH
Confidence 3789999999999999999999987 57788899999999999999999999999998877 677788999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 031838 89 ASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK 139 (152)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~ 139 (152)
+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++
T Consensus 76 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 76 ARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999986
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.1e-30 Score=169.58 Aligned_cols=142 Identities=23% Similarity=0.311 Sum_probs=124.3
Q ss_pred CCChHHHHHHHhCCHHHH----HHHHHhhccccccc----CCCCCchHHHHHHHc---CCHHHHHHHHhcCCCCcccc--
Q 031838 9 IKDKDLFKAAETGDSSTF----KSLSKQQLLKSLSL----RNDDDRTLLHVAASC---GHPEVVEILLSVDESANVVN-- 75 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~----~~ll~~~~~~~~~~----~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~-- 75 (152)
+|.++|+.|+..|+.+.| +++++.+ .+++. ++..|.||||+|+.. |+.+++++|++.+.+.....
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g--~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNS--KYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcC--CCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 478999999999999855 4555555 56776 789999999999999 99999999999876533211
Q ss_pred ------ccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCC-------------CCcHHHHHHHcCCHHHHHHHHh-
Q 031838 76 ------AVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDG-------------GRTALHYAASKGWLKIVELLIS- 135 (152)
Q Consensus 76 ------~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-------------~~~pl~~a~~~~~~~~~~~Ll~- 135 (152)
..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 23467999999999999999999999999999998876 9999999999999999999999
Q ss_pred --cCCCCCCccccccccCC
Q 031838 136 --RGAKINSKDKACNFLYQ 152 (152)
Q Consensus 136 --~g~~~~~~~~~~~t~l~ 152 (152)
+|++++.++..|+||||
T Consensus 159 ~~~ga~~n~~d~~g~TpLh 177 (256)
T 2etb_A 159 PHQPASLEATDSLGNTVLH 177 (256)
T ss_dssp SSCCCCTTCCCTTSCCHHH
T ss_pred cccCCCcCccCCCCCCHHH
Confidence 99999999999999986
No 50
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=3.7e-30 Score=176.02 Aligned_cols=146 Identities=19% Similarity=0.256 Sum_probs=104.0
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcc-----------
Q 031838 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANV----------- 73 (152)
Q Consensus 5 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~----------- 73 (152)
..+..|.|+||.|+..|+.+.|++|++.+ .+++.++..|.||||+|+..|+.+++++|++.+.+...
T Consensus 15 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~ 92 (364)
T 3ljn_A 15 KSDDENMEKIHVAARKGQTDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAV 92 (364)
T ss_dssp -CCHHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHH
Confidence 33444555555555555555555555544 34445555555555555555555555555554432111
Q ss_pred ---------------------ccc-----------------cCCCCChhhHHHHhcC--CHHHHHHHHHcCCCCcccCCC
Q 031838 74 ---------------------VNA-----------------VDEEGWAPIHSAASIG--NVTIVEMLLSKGADVNLKNDG 113 (152)
Q Consensus 74 ---------------------~~~-----------------~~~~~~t~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~ 113 (152)
.+. .+..|.||||+|+..| +.+++++|++.|++++..+..
T Consensus 93 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~ 172 (364)
T 3ljn_A 93 MANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKA 172 (364)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTT
T ss_pred HcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCC
Confidence 111 5667899999999999 999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCC-----CCCccccccccCC
Q 031838 114 GRTALHYAASKGWLKIVELLISRGAK-----INSKDKACNFLYQ 152 (152)
Q Consensus 114 ~~~pl~~a~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~t~l~ 152 (152)
|.|||++|+..++.+++++|+++|++ ++..+..|.||||
T Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~ 216 (364)
T 3ljn_A 173 DETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLH 216 (364)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHH
Confidence 99999999999999999999999988 9999999999986
No 51
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.3e-29 Score=155.30 Aligned_cols=132 Identities=27% Similarity=0.376 Sum_probs=122.0
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.++|+.|+. |+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 30 ~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g 103 (162)
T 1ihb_A 30 NVNAQNGFGRTALQVMKL-GNPEIARRLLLRG--ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD---VNIEDNEG 103 (162)
T ss_dssp CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTS
T ss_pred CccccCccCccHHHHHHc-CcHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCC
Confidence 567788899999999999 9999999999987 67888899999999999999999999999998877 67778899
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGAD-VNLKNDGGRTALHYAASKGWLKIVELLISRGAK 139 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~-~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~ 139 (152)
.||||+|+..++.+++++|++.|.+ ++..+..|.||+++|+..++.+++++|+++|++
T Consensus 104 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999999999999987 588999999999999999999999999999985
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.4e-30 Score=170.72 Aligned_cols=142 Identities=24% Similarity=0.192 Sum_probs=126.9
Q ss_pred CCCChHHHHHH---HhCCHHHHHHHHHhhcc---------cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcccc
Q 031838 8 TIKDKDLFKAA---ETGDSSTFKSLSKQQLL---------KSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVN 75 (152)
Q Consensus 8 ~~~~~~l~~a~---~~~~~~~~~~ll~~~~~---------~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 75 (152)
..|.|+||.|+ ..|+.+++++|++.+.. ..+...+..|.||||+|+..|+.+++++|++.+.+ ++
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~ 120 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD---VH 120 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC---TT
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC---cC
Confidence 66999999999 78999999999997632 23445566899999999999999999999999887 45
Q ss_pred ccC--------------CCCChhhHHHHhcCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHHcCC---------HHH
Q 031838 76 AVD--------------EEGWAPIHSAASIGNVTIVEMLLS---KGADVNLKNDGGRTALHYAASKGW---------LKI 129 (152)
Q Consensus 76 ~~~--------------~~~~t~l~~a~~~~~~~~~~~l~~---~~~~~~~~~~~~~~pl~~a~~~~~---------~~~ 129 (152)
..+ ..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++ .++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~ 200 (260)
T 3jxi_A 121 AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKM 200 (260)
T ss_dssp CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHH
T ss_pred ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHH
Confidence 555 579999999999999999999999 999999999999999999998877 799
Q ss_pred HHHHHhcCCCC-------CCccccccccCC
Q 031838 130 VELLISRGAKI-------NSKDKACNFLYQ 152 (152)
Q Consensus 130 ~~~Ll~~g~~~-------~~~~~~~~t~l~ 152 (152)
+++|+++|+++ +.++..|+||||
T Consensus 201 v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 201 YDLLLIKCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp HHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred HHHHHHhCcccccccchhhcccCCCCCHHH
Confidence 99999999998 679999999986
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=4.8e-29 Score=154.00 Aligned_cols=131 Identities=34% Similarity=0.446 Sum_probs=122.8
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.++|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 39 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g 113 (169)
T 2y1l_E 39 DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG--ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD---VNANDMEG 113 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTS
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCC
Confidence 66778889999999999999999999999987 67888899999999999999999999999999887 67778899
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG 137 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g 137 (152)
.||||+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|++.|
T Consensus 114 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 114 HTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999876
No 54
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.2e-29 Score=164.23 Aligned_cols=148 Identities=24% Similarity=0.264 Sum_probs=134.5
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcc----cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcccccc
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLL----KSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAV 77 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~----~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 77 (152)
|++..+..|.+||+.|+..|+.+++++|++.+.. ..++..+..|.||||+|+..++.+++++|++.+.+ ++.+
T Consensus 70 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~ 146 (236)
T 1ikn_D 70 DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD---VNAQ 146 (236)
T ss_dssp CSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC---TTCC
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCC
Confidence 5677888999999999999999999999998632 22567788899999999999999999999999888 6666
Q ss_pred CC-CCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC--CccccccccCC
Q 031838 78 DE-EGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKIN--SKDKACNFLYQ 152 (152)
Q Consensus 78 ~~-~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~--~~~~~~~t~l~ 152 (152)
+. .|.||||+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++.. ..+..|.||++
T Consensus 147 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 224 (236)
T 1ikn_D 147 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYD 224 (236)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHh
Confidence 76 89999999999999999999999999999999999999999999999999999999999776 78888998874
No 55
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.2e-29 Score=158.01 Aligned_cols=141 Identities=28% Similarity=0.315 Sum_probs=131.6
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.|+|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g 105 (179)
T 3f6q_A 31 DLNQGDDHGFSPLHWACREGRSAVVEMLIMRG--ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD---INAVNEHG 105 (179)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTS
T ss_pred cccccCCCCCCHHHHHHHcCcHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCC
Confidence 56778889999999999999999999999987 67888899999999999999999999999999887 67788999
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccc
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKAC 147 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~ 147 (152)
.||||+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|++++..+..+
T Consensus 106 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 106 NVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 999999999999999999999999999999999999999999999999999999999998766544
No 56
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=4.9e-30 Score=170.46 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=103.5
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.||||.|+..|+.+++++|++.+ .+++.. +|.||||+|+..|+.+++++|++.+.+ ++.++..|
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g 95 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAG--ALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLD---DSQFDDKG 95 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--GGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCC---TTCCCTTS
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCC
Confidence 45677778888888888888888888888876 344444 377888888888888888888877766 55667777
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCC-CcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGG-RTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||+|+..|+.+++++|++.|++++..+..| .|||++|+..++.+++++|+++|++.... ..|.||||
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~ 166 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIH 166 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHH
Confidence 888888888888888888887777777777766 57777776666666666666666555222 15555553
No 57
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.2e-29 Score=177.16 Aligned_cols=146 Identities=30% Similarity=0.347 Sum_probs=87.8
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
+++..+..|.|||+.|+..|++++|++|++.+ .+++.++..|.||||+|+..|+.+++++|++.+.+ ++.++..|
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g 80 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRG--ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK---VNAKAKDD 80 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTT--CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC---SSCCCTTS
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCC
Confidence 34555666667777777777777777776665 45555666666666666666666666666666655 45555666
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||+|+..|+.+++++|++.|++++..+..|.|||++|+..|+.+++++|++++++.+..+..|.||||
T Consensus 81 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~ 151 (437)
T 1n11_A 81 QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLH 151 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHH
Confidence 66666666666666666666666666666666666666666666666666666666555555555555553
No 58
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=5.2e-29 Score=148.84 Aligned_cols=126 Identities=34% Similarity=0.496 Sum_probs=117.0
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhH
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~ 86 (152)
...+.++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~t~L~ 85 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD---VNAVDAIGFTPLH 85 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCHHH
Confidence 345679999999999999999999987 67888899999999999999999999999998877 6777889999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 031838 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG 137 (152)
Q Consensus 87 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g 137 (152)
+|+..++.+++++|++.|++++..|..|.||+++|+..++.+++++|+++|
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999986
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=5.7e-30 Score=169.00 Aligned_cols=144 Identities=23% Similarity=0.247 Sum_probs=127.3
Q ss_pred CCCCCChHHHHHHHh---CCHHHHHHHHHhhcc---------cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 031838 6 DQTIKDKDLFKAAET---GDSSTFKSLSKQQLL---------KSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANV 73 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~---------~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~ 73 (152)
.+..|.|+||.|+.. |+.+++++|++.+.. ......+..|.||||+|+..++.+++++|++.+.+
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~--- 126 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD--- 126 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC---
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC---
Confidence 467899999999986 999999999998632 11223567899999999999999999999999887
Q ss_pred ccccCC--------------CCChhhHHHHhcCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHHcCC---------H
Q 031838 74 VNAVDE--------------EGWAPIHSAASIGNVTIVEMLLS---KGADVNLKNDGGRTALHYAASKGW---------L 127 (152)
Q Consensus 74 ~~~~~~--------------~~~t~l~~a~~~~~~~~~~~l~~---~~~~~~~~~~~~~~pl~~a~~~~~---------~ 127 (152)
++..+. .|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++ .
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~ 206 (273)
T 2pnn_A 127 VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVT 206 (273)
T ss_dssp TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHH
T ss_pred cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHH
Confidence 455554 79999999999999999999999 999999999999999999999888 7
Q ss_pred HHHHHHHhcCCCCC-------CccccccccCC
Q 031838 128 KIVELLISRGAKIN-------SKDKACNFLYQ 152 (152)
Q Consensus 128 ~~~~~Ll~~g~~~~-------~~~~~~~t~l~ 152 (152)
+++++|+++|++++ .++..|+||||
T Consensus 207 ~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~ 238 (273)
T 2pnn_A 207 SMYNEILILGAKLHPTLKLEEITNRKGLTPLA 238 (273)
T ss_dssp HHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred HHHHHHHHhhhhcccccccccccCCCCCCHHH
Confidence 99999999999996 48999999986
No 60
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.7e-30 Score=170.39 Aligned_cols=144 Identities=25% Similarity=0.372 Sum_probs=110.7
Q ss_pred CcCCCCCChHHHHHHHhCCHH-HHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCC
Q 031838 4 DIDQTIKDKDLFKAAETGDSS-TFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (152)
Q Consensus 4 ~~~~~~~~~~l~~a~~~~~~~-~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (152)
+..+..+.++|+.|+..+..+ .++.|++.+ .+++.++..|.||||+|+..|+.+++++|+..+.+ .+..+..|.
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~G--advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~---~~~~~~~g~ 120 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPASG--LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN---AGARNADQA 120 (269)
T ss_dssp -----------------------------CC--CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC---TTCCCTTCC
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC---cCccCCCCC
Confidence 345567889999999988765 677888877 67889999999999999999999999999999887 667788999
Q ss_pred hhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 83 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||++.|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||
T Consensus 121 t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh 190 (269)
T 4b93_B 121 VPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALH 190 (269)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986
No 61
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=2e-29 Score=168.12 Aligned_cols=139 Identities=33% Similarity=0.476 Sum_probs=127.4
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a 88 (152)
.+.++|+.|+..|+++.|++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERG--ADINYANVDGLTALHQACIDDNVDMVKFLVENGAN---INQPDNEGWIPLHAA 113 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHC--CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCcHHHHH
Confidence 4578999999999999999999987 67888899999999999999999999999999887 677788999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCcccC---------------------------------------------------------
Q 031838 89 ASIGNVTIVEMLLSKGADVNLKN--------------------------------------------------------- 111 (152)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~--------------------------------------------------------- 111 (152)
+..|+.+++++|++.|++++..+
T Consensus 114 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193 (299)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchh
Confidence 99999999999999998876544
Q ss_pred ---CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 112 ---DGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 112 ---~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
..|.||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~ 237 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLH 237 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHH
T ss_pred hhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 34678899999999999999999999999999999999986
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=4e-30 Score=166.92 Aligned_cols=140 Identities=21% Similarity=0.228 Sum_probs=91.3
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhH
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~ 86 (152)
+..|.|+|+.|++.++.+.++.|++.+ .+++. +..|.||||.|+..|+.+++++|+..+.+ ++.++..|.||||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g--~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~d~~g~t~L~ 75 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHG--MRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD---PSLPNDEGITALH 75 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS---CCCCCTTSCCHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccC--CCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHH
Confidence 356888999999999999998888887 34444 35678899999999999999988887776 6677888889999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCcccccc-ccCC
Q 031838 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACN-FLYQ 152 (152)
Q Consensus 87 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~-t~l~ 152 (152)
+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++..+..|. ||||
T Consensus 76 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~ 142 (239)
T 1ycs_B 76 NAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAAD 142 (239)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHH
Confidence 99999999999999988888888888889999999999999999999999999988887777 8875
No 63
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=5.1e-29 Score=161.08 Aligned_cols=147 Identities=24% Similarity=0.292 Sum_probs=126.8
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++.-+..+.++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|++.+... ....+..+
T Consensus 1 h~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~~~ 76 (240)
T 3eu9_A 1 HMTHIDDYSTWDIVKATQYGIYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIV--DQLGGDLN 76 (240)
T ss_dssp -CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCBTTTT
T ss_pred CccccccccchHHHHHHHcCChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcc--hhhcCCcC
Confidence 34556778889999999999999999999987 567788888999999999999999999999887763 22334568
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||.|+..++.+++++|++.|++++..+..|.||+++|+..++.+++++|+++|++++..+..|.||||
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 147 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLM 147 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHH
Confidence 89999999999999999999999999988889999999999999999999999999999999999999875
No 64
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=9.5e-29 Score=163.34 Aligned_cols=140 Identities=28% Similarity=0.403 Sum_probs=84.1
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhH
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~ 86 (152)
+..|.++|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~ 110 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHG--ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD---VNECDFYGFTAFM 110 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTCCBHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCcccCCHHH
Confidence 445566666666666666666666655 44555566666666666666666666666665555 4444555666666
Q ss_pred HHHhcCCHHHHHHHHHcCCCCccc----------CCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCCccccccccC
Q 031838 87 SAASIGNVTIVEMLLSKGADVNLK----------NDGGRTALHYAASKGWLKIVELLISR-GAKINSKDKACNFLY 151 (152)
Q Consensus 87 ~a~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~pl~~a~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l 151 (152)
.|+..++.+++++|++.|++++.. +..|.|||++|+..++.+++++|++. |++++..+..|+|||
T Consensus 111 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l 186 (285)
T 1wdy_A 111 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 186 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred HHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHH
Confidence 666666666666666665555544 44455666666666666666666554 555555555555554
No 65
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=7.7e-29 Score=152.71 Aligned_cols=135 Identities=24% Similarity=0.306 Sum_probs=125.6
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.|+|+.|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g 102 (167)
T 3v31_A 28 VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG--ADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVD---VNEYDWNG 102 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCCCTTS
T ss_pred CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---CCcCCCCC
Confidence 56778889999999999999999999999987 67788899999999999999999999999999887 67778899
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKIN 141 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~ 141 (152)
.||||+|+..++.+++++|++.|++++..+..|.||+++|+..++.+++++|+++++++.
T Consensus 103 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 103 GTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999876543
No 66
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=5.7e-29 Score=170.83 Aligned_cols=146 Identities=19% Similarity=0.289 Sum_probs=100.9
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHhhc-ccccccCCCCCchHHHHHHHcC---CHHHHHHHHhcCCCCcc-----cccc
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQQL-LKSLSLRNDDDRTLLHVAASCG---HPEVVEILLSVDESANV-----VNAV 77 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~-----~~~~ 77 (152)
+..|.|+|+.|+..|+.+++++|++.+. ...++..+..|.||||+|+..+ +.+++++|++.+.+... .+..
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 275 (373)
T 2fo1_E 196 NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275 (373)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSS
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcc
Confidence 3334444444444444444444433320 1234445555666666666655 56666666666555322 1124
Q ss_pred CCCCChhhHHHHhcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 78 DEEGWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 78 ~~~~~t~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+..|.||||+|+..|+.+++++|++.+ ++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 276 d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~ 351 (373)
T 2fo1_E 276 KYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQ 351 (373)
T ss_dssp SCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHH
T ss_pred cccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHH
Confidence 567889999999999999999999774 899999999999999999999999999999999999999999999975
No 67
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=1.9e-28 Score=161.91 Aligned_cols=143 Identities=31% Similarity=0.363 Sum_probs=77.1
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccC----------CCCCchHHHHHHHcCCHHHHHHHHhc-CCCCcc
Q 031838 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLR----------NDDDRTLLHVAASCGHPEVVEILLSV-DESANV 73 (152)
Q Consensus 5 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~----------~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~ 73 (152)
..+..|.++|+.|+..|+.+++++|++.+ ..++.+ +..|.||||+|+..++.+++++|++. +.+
T Consensus 100 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--- 174 (285)
T 1wdy_A 100 ECDFYGFTAFMEAAVYGKVKALKFLYKRG--ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD--- 174 (285)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTT--CCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC---
T ss_pred ccCcccCCHHHHHHHhCCHHHHHHHHHhC--CCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC---
Confidence 33444444444444444444444444443 222222 33444555555555555555555543 333
Q ss_pred ccccCCCCChhhHHHHhcCC----HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCcccccc
Q 031838 74 VNAVDEEGWAPIHSAASIGN----VTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLIS-RGAKINSKDKACN 148 (152)
Q Consensus 74 ~~~~~~~~~t~l~~a~~~~~----~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~ 148 (152)
++..+..|.||||.|+..++ .+++++|++.|++++.++..|.||||+|+..++.+++++|++ .|++++.++..|+
T Consensus 175 ~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~ 254 (285)
T 1wdy_A 175 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK 254 (285)
T ss_dssp TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSC
T ss_pred CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCC
Confidence 34445555566666665555 556666666666666666666666666666666666666666 5666666666666
Q ss_pred ccCC
Q 031838 149 FLYQ 152 (152)
Q Consensus 149 t~l~ 152 (152)
||||
T Consensus 255 t~l~ 258 (285)
T 1wdy_A 255 TALL 258 (285)
T ss_dssp CHHH
T ss_pred cHHH
Confidence 6653
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.7e-28 Score=154.37 Aligned_cols=131 Identities=21% Similarity=0.239 Sum_probs=123.2
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.|||+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 60 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g 134 (192)
T 2rfm_A 60 KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG--SNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN---VNDRNLEG 134 (192)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SSCCCTTC
T ss_pred ccccccccCccHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCC
Confidence 56777888999999999999999999999987 67888899999999999999999999999999887 67778899
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG 137 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g 137 (152)
.||||+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|+++|
T Consensus 135 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 135 ETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999875
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=7.9e-29 Score=152.38 Aligned_cols=131 Identities=30% Similarity=0.351 Sum_probs=119.6
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
+++..+..+.|+|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 34 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g 108 (165)
T 3twr_A 34 NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG--ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV---VNVADLWK 108 (165)
T ss_dssp TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTC
T ss_pred CccccccCCCCHHHHHHHcChHHHHHHHHhcC--CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC---CCCcCCCC
Confidence 34556667889999999999999999999987 67888999999999999999999999999999887 67778899
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGA 138 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~ 138 (152)
.||||+|+..++.+++++|++.|++++.++..|.||+++|.. ++.+++++|+++|+
T Consensus 109 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 109 FTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999999999999999999999999999877 89999999999986
No 70
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=4.8e-29 Score=171.18 Aligned_cols=149 Identities=23% Similarity=0.294 Sum_probs=134.2
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.|||+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|+..+.....++..+..|
T Consensus 158 ~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g--a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g 235 (373)
T 2fo1_E 158 DVNAMDCDENTPLMLAVLARRRRLVAYLMKAG--ADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNG 235 (373)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTS
T ss_pred CCcCCCCCCCCHHHHHHHcChHHHHHHHHHCC--CCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCC
Confidence 67888899999999999999999999999987 6788889999999999999999999999998762111167778899
Q ss_pred ChhhHHHHhcC---CHHHHHHHHHcCCCCcc--------cCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCccccccc
Q 031838 82 WAPIHSAASIG---NVTIVEMLLSKGADVNL--------KNDGGRTALHYAASKGWLKIVELLISRG-AKINSKDKACNF 149 (152)
Q Consensus 82 ~t~l~~a~~~~---~~~~~~~l~~~~~~~~~--------~~~~~~~pl~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t 149 (152)
.||||+|+..+ +.+++++|++.|++++. .+..|.||||+|+..++.+++++|++++ ++++..+..|.|
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~T 315 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKT 315 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCC
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCC
Confidence 99999999988 89999999999999876 5678999999999999999999999876 999999999999
Q ss_pred cCC
Q 031838 150 LYQ 152 (152)
Q Consensus 150 ~l~ 152 (152)
|||
T Consensus 316 pL~ 318 (373)
T 2fo1_E 316 PIM 318 (373)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
No 71
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=1.6e-29 Score=168.00 Aligned_cols=138 Identities=18% Similarity=0.150 Sum_probs=109.3
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC-ChhhHH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG-WAPIHS 87 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~t~l~~ 87 (152)
.|.||||.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..| .||||+
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~~t~L~~ 135 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSG--LDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR---LMFYGKTGWKTSFYH 135 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG---GGGCSSSGGGSHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC---CCccCCCCCCCHHHH
Confidence 4788888888888888888888876 56777778888888888888888888888887776 56667777 688888
Q ss_pred HHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCcccccccc-CC
Q 031838 88 AASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFL-YQ 152 (152)
Q Consensus 88 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~-l~ 152 (152)
|+..++.+++++|++.|.+.... ..|.||||+|+..++.+++++|+++|++++.++..|.|| ||
T Consensus 136 A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~ 200 (285)
T 3kea_A 136 AVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIK 200 (285)
T ss_dssp HHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHH
T ss_pred HHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHH
Confidence 88888888888888887665322 267788888888888888888888888888888888887 64
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=1.2e-28 Score=162.63 Aligned_cols=142 Identities=19% Similarity=0.256 Sum_probs=117.2
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCC--------------CCchHHHHHHHcCCHHHHHHHHh---cC
Q 031838 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRND--------------DDRTLLHVAASCGHPEVVEILLS---VD 68 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--------------~g~t~l~~a~~~~~~~~~~~ll~---~~ 68 (152)
.+..|.||||.|+..|+.+++++|++.+ .+++.++. .|.||||+|+..++.+++++|++ .+
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~g--a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 174 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENG--ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP 174 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCC--CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCC
Confidence 4568999999999999999999999987 56777765 79999999999999999999999 77
Q ss_pred CCCccccccCCCCChhhHHHHhcCC---------HHHHHHHHHcCCCCc-------ccCCCCCcHHHHHHHcCCHHHHHH
Q 031838 69 ESANVVNAVDEEGWAPIHSAASIGN---------VTIVEMLLSKGADVN-------LKNDGGRTALHYAASKGWLKIVEL 132 (152)
Q Consensus 69 ~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~l~~~~~~~~-------~~~~~~~~pl~~a~~~~~~~~~~~ 132 (152)
.+ ++.++..|.||||+|+..++ .+++++|++.|++++ .+|..|.|||++|+..|+.+++++
T Consensus 175 ad---~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~ 251 (273)
T 2pnn_A 175 AD---ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY 251 (273)
T ss_dssp CC---TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CC---ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHH
Confidence 77 77888999999999999888 799999999998886 489999999999999999999999
Q ss_pred HHhcCC-CCCCccccccccCC
Q 031838 133 LISRGA-KINSKDKACNFLYQ 152 (152)
Q Consensus 133 Ll~~g~-~~~~~~~~~~t~l~ 152 (152)
|+++|+ ++......+.+|.+
T Consensus 252 Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 252 ILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHTC--------------
T ss_pred HHHCCCCCchhhhhhhhhccC
Confidence 999998 88887777776643
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=4.9e-29 Score=163.39 Aligned_cols=144 Identities=26% Similarity=0.327 Sum_probs=123.8
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHH----hhcccccccCC----CCCchHHHHHH---HcCCHHHHHHHHhcCCCCcc--
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSK----QQLLKSLSLRN----DDDRTLLHVAA---SCGHPEVVEILLSVDESANV-- 73 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~----~~~~~~~~~~~----~~g~t~l~~a~---~~~~~~~~~~ll~~~~~~~~-- 73 (152)
+..+.++|+.|++.|+.+.++.|++ .+ ..++..+ ..|.||||+|+ ..|+.+++++|+..+.+...
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~--~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHK--KRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence 3568899999999999997776666 54 4455443 67999999999 67999999999987643211
Q ss_pred ------ccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccC--------------CCCCcHHHHHHHcCCHHHHHHH
Q 031838 74 ------VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN--------------DGGRTALHYAASKGWLKIVELL 133 (152)
Q Consensus 74 ------~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~~pl~~a~~~~~~~~~~~L 133 (152)
.+..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|
T Consensus 80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 34445589999999999999999999999999999988 6899999999999999999999
Q ss_pred Hh---cCCCCCCccccccccCC
Q 031838 134 IS---RGAKINSKDKACNFLYQ 152 (152)
Q Consensus 134 l~---~g~~~~~~~~~~~t~l~ 152 (152)
++ +|++++.++..|+||||
T Consensus 160 l~~~~~ga~~~~~d~~g~TpLh 181 (260)
T 3jxi_A 160 TENGHKQADLRRQDSRGNTVLH 181 (260)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHH
T ss_pred HhccccCCCCcccCCCCCcHHH
Confidence 99 99999999999999986
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=9.6e-28 Score=146.22 Aligned_cols=128 Identities=24% Similarity=0.335 Sum_probs=120.0
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|++..+..|.|+|+. +..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 28 ~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g 101 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMFGSTAIALELLKQG--ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD---VNVPDGTG 101 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTS
T ss_pred CccccCCCCCcHHHH-HHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC---CCCcCCCC
Confidence 677888899999999 9999999999999987 67888999999999999999999999999999877 67778899
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISR 136 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~ 136 (152)
.||||+|+..++.+++++|++. ++++.++..|.||+++|+..++.+++++|+++
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 102 ALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999998 99999999999999999999999999999874
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.5e-27 Score=145.10 Aligned_cols=123 Identities=33% Similarity=0.389 Sum_probs=115.5
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhh
Q 031838 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l 85 (152)
.+..|.|+|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.|||
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L 104 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAG--VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD---VNAKDMLKMTAL 104 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC---TTCCCTTSCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCC---CCCCCCCCCCHH
Confidence 3567899999999999999999999987 67788899999999999999999999999998877 677788999999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHH
Q 031838 86 HSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELL 133 (152)
Q Consensus 86 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~L 133 (152)
|+|+..++.+++++|++.|++++.++..|.||+++|+..++.+++++|
T Consensus 105 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 105 HWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999999999999999999999887
No 76
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=1.7e-29 Score=158.33 Aligned_cols=135 Identities=16% Similarity=0.155 Sum_probs=113.1
Q ss_pred ChHHHHHHHhCCHHHHHHHHHhhcccccccCC-CCCchHHHHHHHcCCH----HHHHHHHhcCCCCccccccCCCCChhh
Q 031838 11 DKDLFKAAETGDSSTFKSLSKQQLLKSLSLRN-DDDRTLLHVAASCGHP----EVVEILLSVDESANVVNAVDEEGWAPI 85 (152)
Q Consensus 11 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~~~t~l 85 (152)
.++|+.|++.|+++.++.++..+ .+.++ ..|+||||+|+..++. +++++|++.|++ ++.++..|.|||
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~----~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad---vn~~d~~g~TpL 79 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKG----YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD---IKSRTKEGTTLF 79 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHS----SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC---SSCCCTTCCCTH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcC----cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC---CCCCCCCCCcHH
Confidence 46789999999999998888765 23444 6689999999988864 588999988888 677788999999
Q ss_pred HHHHhcCC------HHHHHHHHHcCCCCcccCCCCC-cHHHHHHHcC-----CHHHHHHHHh-cCCCCCCccccccccCC
Q 031838 86 HSAASIGN------VTIVEMLLSKGADVNLKNDGGR-TALHYAASKG-----WLKIVELLIS-RGAKINSKDKACNFLYQ 152 (152)
Q Consensus 86 ~~a~~~~~------~~~~~~l~~~~~~~~~~~~~~~-~pl~~a~~~~-----~~~~~~~Ll~-~g~~~~~~~~~~~t~l~ 152 (152)
|+|+..++ .+++++|++.|++++.+|..|. ||||+|+..+ ..+++++|++ +|++++.+|..|+||||
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence 99998876 5788999999999999999999 9999998844 3468899998 89999999999999985
No 77
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.96 E-value=5.8e-29 Score=148.73 Aligned_cols=132 Identities=28% Similarity=0.334 Sum_probs=107.8
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (152)
|. ..+..|.|+||.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|
T Consensus 3 d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g 76 (137)
T 3c5r_A 3 DP-FTNHRGETLLHIASIKGDIPSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL---VNTTGYQN 76 (137)
T ss_dssp -C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCGGG
T ss_pred CC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc---ccCcCCCC
Confidence 45 56778889999999999999999999876 57778888899999999999999999999988776 66677888
Q ss_pred ChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 031838 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK 139 (152)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~ 139 (152)
.||||+|+..++.+++++|++.|++++.+|..|.||+++|+..+..+++++|.+.+..
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 77 DSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 8999999999999999999998999998888999999999888878887777665543
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=9.3e-29 Score=160.51 Aligned_cols=134 Identities=28% Similarity=0.424 Sum_probs=122.6
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHH
Q 031838 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (152)
Q Consensus 8 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~ 87 (152)
..+.++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~tpL~~ 109 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEV--DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN---VNAADSDGWTPLHC 109 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTT--SSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC---TTCCCTTCCCHHHH
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHH
Confidence 45689999999999999999999987 57889999999999999999999999999999887 67888999999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCcccCCCCC-cHHHHH--HHcCCHHHHHHHHhcCCCCCCcccc
Q 031838 88 AASIGNVTIVEMLLSKGADVNLKNDGGR-TALHYA--ASKGWLKIVELLISRGAKINSKDKA 146 (152)
Q Consensus 88 a~~~~~~~~~~~l~~~~~~~~~~~~~~~-~pl~~a--~~~~~~~~~~~Ll~~g~~~~~~~~~ 146 (152)
|+..++.+++++|++.|++++..+..+. ||+++| +..|+.+++++|+++|++++..+..
T Consensus 110 A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~ 171 (239)
T 1ycs_B 110 AASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG 171 (239)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred HHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence 9999999999999999999999988777 999999 7788999999999999998877554
No 79
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=153.96 Aligned_cols=146 Identities=29% Similarity=0.355 Sum_probs=91.9
Q ss_pred CcCcCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccc-cCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCC
Q 031838 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLS-LRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEE 80 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (152)
|++..+..|.++|+.|+..|+.+++++|++.+ ..+. ..+..|.||||+|+..++.+++++|++.+.+ .+..+..
T Consensus 34 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~ 108 (240)
T 3eu9_A 34 DVRQPDKENVTLLHWAAINNRIDLVKYYISKG--AIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD---PSLIDGE 108 (240)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTT
T ss_pred CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcC--CcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCC---CcccCCC
Confidence 44455556666666666666666666666655 2222 2233356666666666666666666665554 3444555
Q ss_pred CChhhHHHHhcCCHHHHHHHHHcCCC----------------------------------CcccCC-CCCcHHHHHHHcC
Q 031838 81 GWAPIHSAASIGNVTIVEMLLSKGAD----------------------------------VNLKND-GGRTALHYAASKG 125 (152)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~l~~~~~~----------------------------------~~~~~~-~~~~pl~~a~~~~ 125 (152)
|.||||.|+..++.+++++|++.|++ ++..+. .|.|||++|+..+
T Consensus 109 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 109 GCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcC
Confidence 55666666666666666666655544 444443 5667788888888
Q ss_pred CHHHHHHHHhcCCCCCCccccccccCC
Q 031838 126 WLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 126 ~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+.+++++|+++|++++..+..|+||||
T Consensus 189 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 215 (240)
T 3eu9_A 189 NTTVISLLLEAGANVDAQNIKGESALD 215 (240)
T ss_dssp CHHHHHHHHHHTCCTTCBCTTSCBHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 888888888888888888888888764
No 80
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=1.7e-27 Score=161.39 Aligned_cols=141 Identities=29% Similarity=0.440 Sum_probs=111.9
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhhcccccccCCC-CCchHHHHHHHcCCHHHHHHHHhcCCCCcc---------------
Q 031838 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRND-DDRTLLHVAASCGHPEVVEILLSVDESANV--------------- 73 (152)
Q Consensus 10 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~--------------- 73 (152)
++++|+.|++.|++++|++|++.+ .+++.++. .|+||||+|+..|+.+++++|+++++++..
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~G--advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCC--CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 568899999999999999999887 56776654 488999999999999999999988765432
Q ss_pred ---------------ccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCccc----------CCCCCcHHHHHHHcCCHH
Q 031838 74 ---------------VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLK----------NDGGRTALHYAASKGWLK 128 (152)
Q Consensus 74 ---------------~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~pl~~a~~~~~~~ 128 (152)
++..+..|.||++.|+..++.++++++++.|++++.. +..|.||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 3455677888888888888888888888888776543 345778888888888888
Q ss_pred HHHHHHh-cCCCCCCccccccccCC
Q 031838 129 IVELLIS-RGAKINSKDKACNFLYQ 152 (152)
Q Consensus 129 ~~~~Ll~-~g~~~~~~~~~~~t~l~ 152 (152)
++++|++ .|++++.++..|.||++
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~ 207 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALI 207 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHH
T ss_pred HHHHHHhccCCCcCccCCCCCcHHH
Confidence 8888885 58888888888887763
No 81
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=1.3e-27 Score=142.91 Aligned_cols=110 Identities=35% Similarity=0.476 Sum_probs=105.2
Q ss_pred cCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHH
Q 031838 40 LRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALH 119 (152)
Q Consensus 40 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~ 119 (152)
.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD---PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHH
Confidence 6788899999999999999999999998877 6777889999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 120 YAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 120 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+|+..++.+++++|+++|++++.+|..|.||||
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 114 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVD 114 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 999999999999999999999999999999986
No 82
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=158.40 Aligned_cols=132 Identities=21% Similarity=0.246 Sum_probs=121.0
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhhccccccc------CCCCCchHHHHHHHc---CCHHHHHHHHhcCCCCccccccCCC
Q 031838 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSL------RNDDDRTLLHVAASC---GHPEVVEILLSVDESANVVNAVDEE 80 (152)
Q Consensus 10 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (152)
..++|+.|+..|+++.+++|++.+ .+++. .+..|.||||+|+.. ++.+++++|+.++.+ ++.+|..
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad---vn~~d~~ 225 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH---LDAKAAD 225 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT--CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC---TTCCCTT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcC--CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC---CCCCCCC
Confidence 447799999999999999999887 45554 588899999999997 899999999999887 6778899
Q ss_pred CChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 81 GWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|.||||+|+..|+.+++++|++.|++++.+|..|.|||++|+..++.+++++|+++|++ .|.||||
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh 291 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLH 291 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhH
Confidence 99999999999999999999999999999999999999999999999999999999986 5789987
No 83
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=1e-28 Score=158.55 Aligned_cols=137 Identities=23% Similarity=0.282 Sum_probs=112.5
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhc-CCCCccccccCCCCChhh
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSV-DESANVVNAVDEEGWAPI 85 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~t~l 85 (152)
+..|.++|+.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|+.. +.+ ++.++..|.|||
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~---~~~~d~~g~tpL 144 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNR--VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE---LNQQNKLGDTAL 144 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC---CCCCCTTSCCHH
T ss_pred ccccccccccccccCcHHHHHHHHhCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC---ccccCCCCCCHH
Confidence 345789999999999999999999987 67888899999999999999999999999987 666 677889999999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCcccccc
Q 031838 86 HSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACN 148 (152)
Q Consensus 86 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~ 148 (152)
|+|+..|+.+++++|++.|++++.++..|.||+++|+..++.++++.|++.|+.....+..+.
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 999999999999999999999999999999999999999999999999999999888776543
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=9.9e-28 Score=143.25 Aligned_cols=113 Identities=26% Similarity=0.349 Sum_probs=107.4
Q ss_pred cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCC-C
Q 031838 36 KSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDG-G 114 (152)
Q Consensus 36 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~ 114 (152)
.+++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+. ++.+++++|++.|++++.++.. |
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g 78 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD---PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATL 78 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTT
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC---cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCC
Confidence 46788899999999999999999999999998877 67778899999999999 9999999999999999999999 9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 115 RTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 115 ~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 116 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVD 116 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence 99999999999999999999999999999999999985
No 85
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=2.8e-27 Score=138.95 Aligned_cols=112 Identities=33% Similarity=0.477 Sum_probs=93.8
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhH
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~ 86 (152)
...++++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD---INAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT--CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC--CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCHHH
Confidence 356778999999999999999988876 56778888889999999999999999999888776 6677788889999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 031838 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAAS 123 (152)
Q Consensus 87 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~ 123 (152)
+|+..++.+++++|++.|++++.++..|.||+++|..
T Consensus 79 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 9999999999999998888888888889999998843
No 86
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.95 E-value=2.4e-26 Score=162.96 Aligned_cols=135 Identities=20% Similarity=0.216 Sum_probs=115.5
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhhcccccccC------CCCCchHHHHHHH---cCCHHHHHHHHhcCCCCccccccCCC
Q 031838 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLR------NDDDRTLLHVAAS---CGHPEVVEILLSVDESANVVNAVDEE 80 (152)
Q Consensus 10 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~ 80 (152)
..+.|+.|+..|+++.++.|++.+ .+++.. +..|.||||+||. .|+.+++++|++.|++ ++.+|..
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g--~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~---vn~~d~~ 206 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH---LDAKAAD 206 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTT--CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC---TTCCCSS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhc--ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC---CCccCCC
Confidence 347899999999999999999988 455554 7889999999977 8999999999999988 7788999
Q ss_pred CChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccc
Q 031838 81 GWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKACNF 149 (152)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t 149 (152)
|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++.......+
T Consensus 207 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~ 275 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDY 275 (497)
T ss_dssp SCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeec
Confidence 999999999999999999999999999999999999999999999999999999999999875544433
No 87
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=7.3e-27 Score=137.20 Aligned_cols=108 Identities=31% Similarity=0.355 Sum_probs=100.9
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 031838 42 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYA 121 (152)
Q Consensus 42 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a 121 (152)
+..|.||||+|+..++.++++++++.+.+ ++..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED---VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC---TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC---cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 45678999999999999999999998877 677788999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 122 ASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 122 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+..++.+++++|+++|++++.++..|.||||
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 111 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFE 111 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 9999999999999999999999999999985
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=9.8e-28 Score=150.28 Aligned_cols=132 Identities=16% Similarity=0.188 Sum_probs=117.0
Q ss_pred CCCChHHHHHHHhCCH----HHHHHHHHhhcccccccCCCCCchHHHHHHHcCC------HHHHHHHHhcCCCCcccccc
Q 031838 8 TIKDKDLFKAAETGDS----STFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGH------PEVVEILLSVDESANVVNAV 77 (152)
Q Consensus 8 ~~~~~~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~ 77 (152)
..|.||||.|+..|+. +++++|++.+ .+++.++..|+||||+|+..++ .+++++|++.|++ ++.+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G--advn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad---in~~ 110 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKG--ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD---ITAL 110 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTT--CCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC---SSSC
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC---CCcc
Confidence 5689999999999975 4899999987 7889999999999999999886 5789999999988 7788
Q ss_pred CCCCC-hhhHHHHhcC-----CHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCcc
Q 031838 78 DEEGW-APIHSAASIG-----NVTIVEMLLS-KGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD 144 (152)
Q Consensus 78 ~~~~~-t~l~~a~~~~-----~~~~~~~l~~-~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~ 144 (152)
|..|. ||||+|+..+ +.+++++|++ .|++++.+|..|.|||++|+..++.+++++|.++....+.++
T Consensus 111 d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 111 YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp BGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 88999 9999999844 4568999999 899999999999999999999999999999998766555554
No 89
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=152.70 Aligned_cols=131 Identities=27% Similarity=0.346 Sum_probs=122.2
Q ss_pred CcCcCCCCCChHHHHHH-----HhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccc
Q 031838 2 DMDIDQTIKDKDLFKAA-----ETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNA 76 (152)
Q Consensus 2 ~~~~~~~~~~~~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 76 (152)
|++..+..|.+||+.|+ ..++.+.++.|++.+ ......+..|.||||+|+..|+.+++++|++.+.+ ++.
T Consensus 137 ~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g--~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad---~n~ 211 (276)
T 4hbd_A 137 KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG--NINAKASQAGQTALMLAVSHGRVDVVKALLACEAD---VNV 211 (276)
T ss_dssp CTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS--CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTC
T ss_pred cCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCC
Confidence 67788899999999999 779999999999987 56667788899999999999999999999999888 677
Q ss_pred cCCCCChhhHHHHhcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 031838 77 VDEEGWAPIHSAASIGNVTIVEMLLS-KGADVNLKNDGGRTALHYAASKGWLKIVELLISRG 137 (152)
Q Consensus 77 ~~~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g 137 (152)
+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..|+.+++++|++++
T Consensus 212 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 212 QDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 88999999999999999999999999 79999999999999999999999999999999875
No 90
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=6.5e-26 Score=153.59 Aligned_cols=135 Identities=26% Similarity=0.292 Sum_probs=102.6
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCC----HHHHHHHHhcCCCCccccccCCC
Q 031838 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGH----PEVVEILLSVDESANVVNAVDEE 80 (152)
Q Consensus 5 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~~~ 80 (152)
..+..|.|||+.|+..|+.++|++|+++. +.+++.++..|.|+++.++..+. ..++++|++.|.+ ++.++..
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~-gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad---~n~~d~~ 238 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEM-GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD---VNVRGER 238 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC---TTCCCGG
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhcc-CCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC---CCCcCCC
Confidence 34556889999999999999999999753 36677777778888777665443 3466777777776 5666777
Q ss_pred CChhhHHHHhcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCc
Q 031838 81 GWAPIHSAASIGNVTIVEMLLSK-GADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSK 143 (152)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~ 143 (152)
|.||||+|+..++.+++++|+.. |++++.+|..|.||||+|+..|+.+++++|+++|++++.+
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~ 302 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 302 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 78888888888888888877765 6777777888888888888888888888888888777654
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.94 E-value=1.9e-25 Score=147.93 Aligned_cols=129 Identities=20% Similarity=0.223 Sum_probs=117.2
Q ss_pred ChHHHHHHHhCCHHHHHHHHHhhcccc----cccCCCCCchHHHHHHHc---CCHHHHHHHHhcCCCCccccccCCCCCh
Q 031838 11 DKDLFKAAETGDSSTFKSLSKQQLLKS----LSLRNDDDRTLLHVAASC---GHPEVVEILLSVDESANVVNAVDEEGWA 83 (152)
Q Consensus 11 ~~~l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~t 83 (152)
.++|+.|+..|+++.++.+++.+.... ++..+..|.||||+|+.. ++.+++++|++.+.+ ++.+|..|.|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~---in~~d~~g~T 207 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN---LDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC---TTCCCTTCCC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC---ccccCCCCCC
Confidence 468999999999999999999874322 455678899999999999 899999999999988 7788899999
Q ss_pred hhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 031838 84 PIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINS 142 (152)
Q Consensus 84 ~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~ 142 (152)
|||+|+..|+.+++++|++.|++++.+|..|.|||++|+..++.+++++|+++|++...
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999986533
No 92
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.94 E-value=5e-26 Score=155.58 Aligned_cols=138 Identities=24% Similarity=0.304 Sum_probs=115.2
Q ss_pred CCChHHHHHHHh-CCHHHHHHHHHhhcccccccCC--CCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhh
Q 031838 9 IKDKDLFKAAET-GDSSTFKSLSKQQLLKSLSLRN--DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (152)
Q Consensus 9 ~~~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l 85 (152)
.+.++|+.|+.. |+++++++|++.+ .+++..+ ..|.||||+|+..++.+++++|+..+.+ ++..|..|.|||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~G--advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad---vn~~d~~G~TpL 272 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHG--ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN---VNQADSAGRGPL 272 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTT--CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcC--CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC---CCCCCCCCCCHH
Confidence 345799999999 9999999999987 5666666 8899999999999999999999999888 677889999999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC---CCCCCccccccccC
Q 031838 86 HSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG---AKINSKDKACNFLY 151 (152)
Q Consensus 86 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g---~~~~~~~~~~~t~l 151 (152)
|+|+..++.+++++|++.|++++..|..|.|||++|+..++.+++++|+..+ ++....+..+.|++
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l 341 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYL 341 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------
T ss_pred HHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999876 44444556666665
No 93
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=4.7e-26 Score=135.93 Aligned_cols=108 Identities=40% Similarity=0.527 Sum_probs=101.8
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 031838 42 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYA 121 (152)
Q Consensus 42 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a 121 (152)
...+.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD---VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 44578999999999999999999999877 677788999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 122 ASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 122 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+..++.+++++|+++|++++.++..|.||||
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~ 118 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFD 118 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHH
Confidence 9999999999999999999999999999985
No 94
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=144.86 Aligned_cols=124 Identities=27% Similarity=0.287 Sum_probs=104.7
Q ss_pred HHHHHHhhcccc-cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcC
Q 031838 26 FKSLSKQQLLKS-LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKG 104 (152)
Q Consensus 26 ~~~ll~~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~ 104 (152)
++.|++++.... .+..+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++.|
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND---PSQPNEEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 355666653222 334556678999999999999999999999887 6778899999999999999999999999999
Q ss_pred CCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCcc-ccccccCC
Q 031838 105 ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD-KACNFLYQ 152 (152)
Q Consensus 105 ~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~l~ 152 (152)
++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||
T Consensus 78 a~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~ 126 (229)
T 2vge_A 78 ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFE 126 (229)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGG
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHH
Confidence 9999999999999999999999999999999999999987 69999996
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1.4e-25 Score=140.13 Aligned_cols=111 Identities=24% Similarity=0.382 Sum_probs=100.5
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccC-CCCChhhH
Q 031838 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVD-EEGWAPIH 86 (152)
Q Consensus 8 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~t~l~ 86 (152)
..|.|+|+.|+..|+.+.++.|++ + .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++ ..|.||||
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD---LDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-T--SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCSSSSCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-c--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCCHHH
Confidence 356799999999999999999998 5 67888899999999999999999999999998887 55666 78999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 031838 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASK 124 (152)
Q Consensus 87 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~ 124 (152)
+|+..++.+++++|++.|++++.+|..|.||+++|+..
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 99999999999999999999999999999999999875
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=7.4e-26 Score=147.29 Aligned_cols=125 Identities=24% Similarity=0.371 Sum_probs=113.3
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccC-CCCChhhHH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVD-EEGWAPIHS 87 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~t~l~~ 87 (152)
.|.|+||.|+..|+.+.++.|++ + .+++.++..|.||||+|+..|+.+++++|+..+.+ ++.++ ..|.||||+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD---LDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-T--CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---TTCCCSSSCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-C--CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC---CCcCCCCCCCCHHHH
Confidence 57899999999999999999999 5 67888999999999999999999999999999888 55666 789999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH----------------HcCCHHHHHHHHhcCCC
Q 031838 88 AASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAA----------------SKGWLKIVELLISRGAK 139 (152)
Q Consensus 88 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~----------------~~~~~~~~~~Ll~~g~~ 139 (152)
|+..|+.+++++|++.|++++.++..|.||+++|+ ..|+.+++++|++++.+
T Consensus 118 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 99999999999999999999999999999998888 56778999999986543
No 97
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.93 E-value=5.3e-25 Score=123.22 Aligned_cols=93 Identities=49% Similarity=0.757 Sum_probs=83.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 031838 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAAS 123 (152)
Q Consensus 44 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~ 123 (152)
.|+||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||+++|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 378999999999999999999988877 67778899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCC
Q 031838 124 KGWLKIVELLISRGAK 139 (152)
Q Consensus 124 ~~~~~~~~~Ll~~g~~ 139 (152)
.++.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCC
Confidence 9999999999999875
No 98
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.93 E-value=5.7e-26 Score=131.85 Aligned_cols=109 Identities=40% Similarity=0.556 Sum_probs=97.7
Q ss_pred cCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHH
Q 031838 40 LRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALH 119 (152)
Q Consensus 40 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~ 119 (152)
.+|..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++.|++++.++..|.|||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD---VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEH 80 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC---SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 5678899999999999999999999988777 6677888999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCccccccccC
Q 031838 120 YAASKGWLKIVELLISRGAKINSKDKACNFLY 151 (152)
Q Consensus 120 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l 151 (152)
+|+..++.+++++|+++|++++.++..|.||-
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999999884
No 99
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=3.7e-25 Score=130.01 Aligned_cols=106 Identities=47% Similarity=0.716 Sum_probs=100.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 031838 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAAS 123 (152)
Q Consensus 44 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~ 123 (152)
+|.||||+|+..++.++++++++.+.+ ++..+..|.||||.|+..++.+++++|++.|++++.++..|.||+++|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Confidence 489999999999999999999998877 66778899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 124 KGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 124 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.++.+++++|+++|++++.++..|.||||
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~ 106 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLH 106 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 99999999999999999999999999985
No 100
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=9.6e-26 Score=137.52 Aligned_cols=111 Identities=27% Similarity=0.371 Sum_probs=100.6
Q ss_pred cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCc-
Q 031838 38 LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRT- 116 (152)
Q Consensus 38 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~- 116 (152)
....+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+ .++.+++++|++.|++++.++..|.|
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~tt 80 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGAN---PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTR 80 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCC---TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCC
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 345567789999999999999999999998877 6777889999999985 89999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 117 ALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 117 pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 116 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVD 116 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 999999999999999999999999999999999986
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=3.1e-25 Score=138.54 Aligned_cols=107 Identities=32% Similarity=0.402 Sum_probs=100.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccC-CCCCcHHHH
Q 031838 42 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHY 120 (152)
Q Consensus 42 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~~pl~~ 120 (152)
+..|.||||+|+..|+.++++.++. +.+ ++.++..|.||||+|+..++.+++++|++.|++++..+ ..|.||||+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD---VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence 3468899999999999999999998 665 67788999999999999999999999999999999888 889999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 121 AASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 121 a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
|+..++.+++++|+++|++++.++..|+||||
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 148 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADIEVEDERGLTALE 148 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHH
Confidence 99999999999999999999999999999985
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.6e-25 Score=143.64 Aligned_cols=109 Identities=31% Similarity=0.430 Sum_probs=103.0
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHc-CCCCcccCCCCCcHHH
Q 031838 41 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSK-GADVNLKNDGGRTALH 119 (152)
Q Consensus 41 ~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~~pl~ 119 (152)
.+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++. |++++.++..|.||||
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVG---VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCC---ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHH
Confidence 455688999999999999999999998877 677788999999999999999999999998 9999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 120 YAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 120 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 178 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAFD 178 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCHHH
Confidence 999999999999999999999999999999985
No 103
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=8.4e-25 Score=142.31 Aligned_cols=106 Identities=32% Similarity=0.413 Sum_probs=99.9
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHH
Q 031838 43 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHYA 121 (152)
Q Consensus 43 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~~pl~~a 121 (152)
..|.||||+|+..|+.++++.|+. +.+ ++.++..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~---~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRD---VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCC---TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCC---CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 458899999999999999999998 665 67788999999999999999999999999999999888 7899999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 122 ASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 122 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+..++.+++++|+++|++++.++..|.||||
T Consensus 119 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~ 149 (244)
T 3ui2_A 119 AGYVRPEVVEALVELGADIEVEDERGLTALE 149 (244)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 9999999999999999999999999999986
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.90 E-value=8.5e-25 Score=147.77 Aligned_cols=119 Identities=18% Similarity=0.119 Sum_probs=101.5
Q ss_pred HHHHHHHhCCHHHHHHHHHhhccccccc-CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhc
Q 031838 13 DLFKAAETGDSSTFKSLSKQQLLKSLSL-RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASI 91 (152)
Q Consensus 13 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~ 91 (152)
..+.|+..+..+.++.|++.+ .+++. ++..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g--~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad---~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQ--LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN---RLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSC--CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTBCCTTCCCHHHHHHHS
T ss_pred hhHHHHHhhHHHHHHHHHhcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHh
Confidence 346667666677777777765 67888 899999999999999999999999999988 678889999999999999
Q ss_pred CC---HHHHHHHHHcC-CCCcccCCCCCcHHHHHHH----cCCHHHHHHHHhc
Q 031838 92 GN---VTIVEMLLSKG-ADVNLKNDGGRTALHYAAS----KGWLKIVELLISR 136 (152)
Q Consensus 92 ~~---~~~~~~l~~~~-~~~~~~~~~~~~pl~~a~~----~~~~~~~~~Ll~~ 136 (152)
|+ .++++.|++.+ .+++.++..|.||||+|+. .++.+++++|++.
T Consensus 175 g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 175 VNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp SHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred cccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 98 67777788774 7799999999999999999 8999999999987
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=8.5e-23 Score=114.18 Aligned_cols=92 Identities=37% Similarity=0.532 Sum_probs=85.4
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHH
Q 031838 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAA 89 (152)
Q Consensus 10 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~ 89 (152)
|.||||.|+..|+.+++++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g--~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAA 76 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHH
Confidence 789999999999999999999987 67889999999999999999999999999999888 6777889999999999
Q ss_pred hcCCHHHHHHHHHcCCC
Q 031838 90 SIGNVTIVEMLLSKGAD 106 (152)
Q Consensus 90 ~~~~~~~~~~l~~~~~~ 106 (152)
..++.+++++|++.|++
T Consensus 77 ~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 77 RNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HTTCHHHHHHHHHTTCC
T ss_pred HcCCHHHHHHHHHcCCC
Confidence 99999999999998863
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=1.8e-23 Score=121.21 Aligned_cols=109 Identities=34% Similarity=0.461 Sum_probs=99.1
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChh
Q 031838 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAP 84 (152)
Q Consensus 5 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~ 84 (152)
.++..|.++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~d~~g~tp 78 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD---VNARSKDGNTP 78 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC---TTCCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC---CcccCCCCCCH
Confidence 56788999999999999999999999987 67888899999999999999999999999998877 67778899999
Q ss_pred hHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcHH
Q 031838 85 IHSAASIGNVTIVEMLLSKGADVNLKNDGGRTAL 118 (152)
Q Consensus 85 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~pl 118 (152)
||+|+..++.+++++|++.|++++..+..+.+|-
T Consensus 79 l~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999999888874
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.89 E-value=2.3e-25 Score=152.74 Aligned_cols=129 Identities=19% Similarity=0.221 Sum_probs=104.2
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhhccc-ccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHH
Q 031838 9 IKDKDLFKAAETGDSSTFKSLSKQQLLK-SLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (152)
Q Consensus 9 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~ 87 (152)
.+.|+||.|++.|+.+++++|++.+... .....+..|.||||+|+..|+.+++++|++.+++....+..+.. .||||.
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 3469999999999999999999987311 12234456789999999999999999999988642211222222 899999
Q ss_pred HHhcCCHHHHHHHHHcCCCCcc--cCCCCCcHHHHHH-HcCCHHHHHHHHhcCC
Q 031838 88 AASIGNVTIVEMLLSKGADVNL--KNDGGRTALHYAA-SKGWLKIVELLISRGA 138 (152)
Q Consensus 88 a~~~~~~~~~~~l~~~~~~~~~--~~~~~~~pl~~a~-~~~~~~~~~~Ll~~g~ 138 (152)
|+..|+.+++++|++.|++++. .+..|.||||+|+ ..|+.+++++|++.|+
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 9999999999999999999876 7788999999999 9999999999999774
No 108
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=9.9e-22 Score=131.39 Aligned_cols=105 Identities=19% Similarity=0.247 Sum_probs=97.3
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCccccc------cCCCCChhhHHHHhc---CCHHHHHHHHHcCCCCcccCCCCC
Q 031838 45 DRTLLHVAASCGHPEVVEILLSVDESANVVNA------VDEEGWAPIHSAASI---GNVTIVEMLLSKGADVNLKNDGGR 115 (152)
Q Consensus 45 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~------~~~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~ 115 (152)
..++|+.|+..++.+.++.++..+.+ ++. .+..|.||||+|+.. ++.+++++|++.|++++.+|..|.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d---~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQD---FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC---TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCc---ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 45779999999999999999988877 333 577899999999987 899999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 116 TALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 116 ~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||||+|+..++.+++++|+++|++++.+|..|.||||
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 264 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 9999999999999999999999999999999999985
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=3.3e-22 Score=136.75 Aligned_cols=109 Identities=25% Similarity=0.320 Sum_probs=100.1
Q ss_pred CCCCCchHHHHHHHc-CCHHHHHHHHhcCCCCccccccC--CCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcH
Q 031838 41 RNDDDRTLLHVAASC-GHPEVVEILLSVDESANVVNAVD--EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTA 117 (152)
Q Consensus 41 ~~~~g~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~p 117 (152)
....+.++||.|+.. ++.++++.|+..+.+ ++..+ ..|.||||+|+..++.+++++|++.|++++..|..|.||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad---vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~Tp 271 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGAD---VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGP 271 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCC---TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCC---CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 334456899999999 999999999999888 55555 789999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 118 LHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 118 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
||+|+..++.+++++|+++|++++..|..|.||||
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~ 306 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADLGARDSEGRDPLT 306 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHH
Confidence 99999999999999999999999999999999986
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=1.3e-21 Score=138.74 Aligned_cols=106 Identities=19% Similarity=0.220 Sum_probs=97.6
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCcccccc------CCCCChhhHHHHh---cCCHHHHHHHHHcCCCCcccCCCC
Q 031838 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAV------DEEGWAPIHSAAS---IGNVTIVEMLLSKGADVNLKNDGG 114 (152)
Q Consensus 44 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~------~~~~~t~l~~a~~---~~~~~~~~~l~~~~~~~~~~~~~~ 114 (152)
...+.|+.|+..|+.+.++.++..+.+ ++.. +..|.||||+|+. .|+.+++++|++.|++++.+|..|
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~---~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g 207 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQD---FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG 207 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCC---SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSS
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhccc---ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCC
Confidence 345789999999999999999999887 4433 6789999999966 899999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 115 RTALHYAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 115 ~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 245 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 245 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999986
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=3.9e-21 Score=127.24 Aligned_cols=107 Identities=17% Similarity=0.155 Sum_probs=97.4
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCcc---ccccCCCCChhhHHHHhc---CCHHHHHHHHHcCCCCcccCCCCCcHHH
Q 031838 46 RTLLHVAASCGHPEVVEILLSVDESANV---VNAVDEEGWAPIHSAASI---GNVTIVEMLLSKGADVNLKNDGGRTALH 119 (152)
Q Consensus 46 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~---~~~~~~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~~pl~ 119 (152)
.++|+.|+..++.+.+..++..+.+... ++..+..|.||||+|+.. ++.+++++|++.|++++.+|..|.||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 4689999999999999999988776321 334477899999999999 8999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCccccccccCC
Q 031838 120 YAASKGWLKIVELLISRGAKINSKDKACNFLYQ 152 (152)
Q Consensus 120 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~ 152 (152)
+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~ 243 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLD 243 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHH
Confidence 999999999999999999999999999999986
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=9.1e-21 Score=109.06 Aligned_cols=93 Identities=33% Similarity=0.448 Sum_probs=80.9
Q ss_pred cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhhHHHHhcCCHHHHHHHHHcCCCCcccCCCCCcH
Q 031838 38 LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTA 117 (152)
Q Consensus 38 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~p 117 (152)
....+..|.|+||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++.|++++.++..|.||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tp 93 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGAD---VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTA 93 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcH
Confidence 344567789999999999999999999988777 67778899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHH
Q 031838 118 LHYAASKGWLKIVELL 133 (152)
Q Consensus 118 l~~a~~~~~~~~~~~L 133 (152)
+++|+..++.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999876
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=1.6e-23 Score=143.65 Aligned_cols=125 Identities=15% Similarity=0.139 Sum_probs=105.2
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhhcc---cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccc--cCCCCC
Q 031838 8 TIKDKDLFKAAETGDSSTFKSLSKQQLL---KSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNA--VDEEGW 82 (152)
Q Consensus 8 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~---~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~--~~~~~~ 82 (152)
..+.+||+.|+..|+.++|++|++.+.+ .+++.+ . .||||+|+..|+.+++++|++.+++ .+. .+..|.
T Consensus 126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~--~-~TpLh~Aa~~G~~eiv~~Ll~~ga~---~~~~~~d~~g~ 199 (376)
T 2aja_A 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE--N-YHAFRLAAENGHLHVLNRLCELAPT---EATAMIQAENY 199 (376)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH--H-HHHHHHHHHTTCHHHHHHHHHSCGG---GHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCC--C-CCHHHHHHHCCCHHHHHHHHHcCCc---cchhccCCCCC
Confidence 3467899999999999999999998732 123333 3 8999999999999999999999877 343 567789
Q ss_pred hhhHHHH-hcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCccc
Q 031838 83 APIHSAA-SIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDK 145 (152)
Q Consensus 83 t~l~~a~-~~~~~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 145 (152)
||||+|+ ..|+.+++++|++.|. .+.||+++|+..|+.+++++|+++|++++..+.
T Consensus 200 TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~ 256 (376)
T 2aja_A 200 YAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD 256 (376)
T ss_dssp HHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccccccH
Confidence 9999999 9999999999998653 278999999999999999999999987755443
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=1.7e-19 Score=103.72 Aligned_cols=90 Identities=29% Similarity=0.396 Sum_probs=81.6
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccccCCCCChhh
Q 031838 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~t~l 85 (152)
.+..+.++|+.|+..|+.+.+++|++.+ .+++.++..|.||||+|+..++.+++++|+..+.+ ++.++..|.|||
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl 94 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD---VXAQDKFGKTAF 94 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccccCCCcHH
Confidence 3456889999999999999999999986 67888899999999999999999999999999877 677788999999
Q ss_pred HHHHhcCCHHHHHHH
Q 031838 86 HSAASIGNVTIVEML 100 (152)
Q Consensus 86 ~~a~~~~~~~~~~~l 100 (152)
|+|+..++.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999876
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=84.36 E-value=1.6 Score=19.25 Aligned_cols=21 Identities=33% Similarity=0.528 Sum_probs=16.6
Q ss_pred hHHHHHHHhCCHHHHHHHHHh
Q 031838 12 KDLFKAAETGDSSTFKSLSKQ 32 (152)
Q Consensus 12 ~~l~~a~~~~~~~~~~~ll~~ 32 (152)
..++.|+..|+.+.++.|-.+
T Consensus 15 QqiyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHH
Confidence 467889999999999877543
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=54.64 E-value=23 Score=24.96 Aligned_cols=51 Identities=22% Similarity=0.237 Sum_probs=37.0
Q ss_pred HHHHhCCHHHHHHHHHhhcccc----------cc--cCCCCCchHHHHHHHcCCHHHHHHHHh
Q 031838 16 KAAETGDSSTFKSLSKQQLLKS----------LS--LRNDDDRTLLHVAASCGHPEVVEILLS 66 (152)
Q Consensus 16 ~a~~~~~~~~~~~ll~~~~~~~----------~~--~~~~~g~t~l~~a~~~~~~~~~~~ll~ 66 (152)
..+..|+...|+..+..+-+.. ++ .....|.|.+|.|++..+.+++..++.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3556799999988887641111 11 123458999999999999999998886
No 117
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=45.50 E-value=50 Score=20.15 Aligned_cols=112 Identities=13% Similarity=0.052 Sum_probs=59.3
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccc---------------
Q 031838 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVV--------------- 74 (152)
Q Consensus 10 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~--------------- 74 (152)
.++.+-.|+..|+++....+.+.- +.... -...-..|...|+.++++....+..+....
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~l-----~~~~~-Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~k 81 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKKL-----NDSIT-WERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSK 81 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-----CCHHH-HHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHH
T ss_pred hHHHHHHHHhcCCHHHHHHHHHHh-----CCHHH-HHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHH
Confidence 357888999999999998776532 00000 112334455666666665554433321110
Q ss_pred ----cccCCCCChhhHHHHhcCCHH-HHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 031838 75 ----NAVDEEGWAPIHSAASIGNVT-IVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLIS 135 (152)
Q Consensus 75 ----~~~~~~~~t~l~~a~~~~~~~-~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~ 135 (152)
.........+++.+...|+.+ +++.+.+.|. ..-+...|..++..++.+.+++
T Consensus 82 la~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r--------~~eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 82 MQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGS--------LPLAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC--------HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCC--------hHHHHHHHHHcCcHHHHHHHHH
Confidence 000111223444454555533 5565655421 1124677777899988887764
No 118
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=39.09 E-value=90 Score=22.35 Aligned_cols=117 Identities=15% Similarity=0.091 Sum_probs=0.0
Q ss_pred hHHHHHHHhCCHHHHHHHHHhhcccccccCCCCCchHHHHHHHcCC-------------HHHHHHHHhcCCCCccccccC
Q 031838 12 KDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGH-------------PEVVEILLSVDESANVVNAVD 78 (152)
Q Consensus 12 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~-------------~~~~~~ll~~~~~~~~~~~~~ 78 (152)
..|-.+++.|+++.+..+.+.-....+......-.+.|+..+..+. .++++.+...|..++....
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty-- 108 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF-- 108 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH--
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH--
Q ss_pred CCCChhhHHHHhcCC----HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 031838 79 EEGWAPIHSAASIGN----VTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLIS 135 (152)
Q Consensus 79 ~~~~t~l~~a~~~~~----~~~~~~l~~~~~~~~~~~~~~~~pl~~a~~~~~~~~~~~Ll~ 135 (152)
.+.+...+..|. .++++.+.+.|..++...+. +.+...++.|..+-+..+++
T Consensus 109 ---n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn--~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 109 ---TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYG--PALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp ---HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH--HHHHHHHHTTCHHHHHHHHH
T ss_pred ---HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceeh--HHHHHHHHCCCHHHHHHHHH
No 119
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=33.15 E-value=25 Score=23.81 Aligned_cols=25 Identities=20% Similarity=0.132 Sum_probs=12.6
Q ss_pred CCCCChhhHHHHhcCCHHHHHHHHH
Q 031838 78 DEEGWAPIHSAASIGNVTIVEMLLS 102 (152)
Q Consensus 78 ~~~~~t~l~~a~~~~~~~~~~~l~~ 102 (152)
|..|+-.+..+...+..+..+.+++
T Consensus 214 d~~Gn~ViQ~~l~~~~~~~~~~i~~ 238 (351)
T 3gvo_A 214 DQYGNYVIQHVLEHGRPEDKSKIVS 238 (351)
T ss_dssp STTHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CchHHHHHHHHHHhCchhhHHHHHH
Confidence 4455555555555555444444443
No 120
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=31.85 E-value=24 Score=20.17 Aligned_cols=28 Identities=14% Similarity=0.147 Sum_probs=16.7
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHhh
Q 031838 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQ 33 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~ 33 (152)
++..-.-++..|+..++.+.+..|+.-.
T Consensus 31 kDkLykDAietAa~S~d~elaEeLL~yF 58 (125)
T 3qil_A 31 KDSLYKDAMQYASESKDTELAEELLQWF 58 (125)
T ss_dssp CCCCSSHHHHTTTSSCCSHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3344445666666666777666666643
No 121
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=29.76 E-value=52 Score=22.21 Aligned_cols=52 Identities=12% Similarity=-0.050 Sum_probs=25.6
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHHhhcccccc-cCCCCCchHHHHHHHcCC
Q 031838 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLS-LRNDDDRTLLHVAASCGH 57 (152)
Q Consensus 6 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~g~t~l~~a~~~~~ 57 (152)
.+..|+..+...++.++.+....+++.-.+..+. ..+..|...+..+.....
T Consensus 69 ~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~ 121 (351)
T 3gvo_A 69 TDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESIS 121 (351)
T ss_dssp TSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSC
T ss_pred hChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCC
Confidence 3455666666666666666666655532111111 234444444444444443
No 122
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=28.58 E-value=33 Score=12.99 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=11.9
Q ss_pred HHHHHHcCCHHHHHHHHh
Q 031838 118 LHYAASKGWLKIVELLIS 135 (152)
Q Consensus 118 l~~a~~~~~~~~~~~Ll~ 135 (152)
+.+|.++..+++++..++
T Consensus 5 mcyaqrhsspellrrcld 22 (26)
T 2plx_B 5 MCYAQRHSSPELLRRCLD 22 (26)
T ss_dssp HHHHBCCCCHHHHHHHHH
T ss_pred EeehhhcCCHHHHHHHHh
Confidence 456666777777766654
No 123
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=20.95 E-value=71 Score=21.73 Aligned_cols=26 Identities=19% Similarity=0.115 Sum_probs=15.9
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHHh
Q 031838 7 QTIKDKDLFKAAETGDSSTFKSLSKQ 32 (152)
Q Consensus 7 ~~~~~~~l~~a~~~~~~~~~~~ll~~ 32 (152)
+..|+..+...+..++.+....+++.
T Consensus 75 d~~gn~vvQkll~~~~~~~~~~i~~~ 100 (369)
T 3k49_A 75 DVFGNYVIQKFFEFGSKIQKNTLVDQ 100 (369)
T ss_dssp STTTHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CcccccHHHHHHHhCCHHHHHHHHHH
Confidence 45566666666666666655555553
Done!