Query 031839
Match_columns 152
No_of_seqs 148 out of 1122
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 09:23:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031839.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031839hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2aak_A UBC1, ubiquitin conjuga 100.0 5.8E-54 2E-58 306.1 18.9 152 1-152 1-152 (152)
2 1ayz_A UBC2, ubiquitin-conjuga 100.0 6.2E-54 2.1E-58 310.4 19.0 150 1-150 1-150 (169)
3 2ucz_A UBC7, ubiquitin conjuga 100.0 1.5E-53 5.1E-58 307.7 18.6 150 1-150 1-164 (165)
4 4gpr_A Ubiquitin-conjugating e 100.0 5.8E-53 2E-57 300.6 19.6 149 2-150 2-150 (151)
5 1zdn_A Ubiquitin-conjugating e 100.0 3.1E-53 1.1E-57 304.0 17.5 149 1-149 10-158 (158)
6 2c2v_B Ubiquitin-conjugating e 100.0 1.5E-53 5.1E-58 304.5 15.1 151 1-151 2-152 (154)
7 3h8k_A Ubiquitin-conjugating e 100.0 1.4E-52 4.7E-57 302.4 19.7 149 2-150 1-163 (164)
8 1z2u_A Ubiquitin-conjugating e 100.0 2.4E-52 8.1E-57 297.2 18.4 149 2-150 2-150 (150)
9 2ayv_A Ubiquitin-conjugating e 100.0 3.5E-52 1.2E-56 300.4 19.3 148 2-149 19-166 (166)
10 2e2c_A Ubiquitin conjugating e 100.0 2.7E-52 9.1E-57 298.7 18.0 150 1-151 6-155 (156)
11 2c4o_A Ubiquitin-conjugating e 100.0 6.7E-52 2.3E-56 298.8 20.0 149 2-150 17-165 (165)
12 2gjd_A Ubiquitin-conjugating e 100.0 3.7E-52 1.3E-56 298.2 17.8 150 1-150 1-157 (157)
13 2bep_A Ubiquitin-conjugating e 100.0 6.9E-52 2.4E-56 297.3 19.1 150 1-150 5-158 (159)
14 1yh2_A HSPC150 protein similar 100.0 1.3E-51 4.4E-56 298.5 19.7 149 2-150 2-154 (169)
15 2r0j_A Ubiquitin carrier prote 100.0 4.5E-52 1.6E-56 295.4 16.4 146 5-150 2-147 (149)
16 3rcz_B SUMO-conjugating enzyme 100.0 1.1E-51 3.8E-56 297.0 18.0 148 2-149 8-162 (163)
17 2grr_A Ubiquitin-conjugating e 100.0 9.6E-52 3.3E-56 297.1 17.6 151 1-151 4-161 (161)
18 1i7k_A Ubiquitin-conjugating e 100.0 4.4E-52 1.5E-56 302.9 15.5 149 1-150 27-175 (179)
19 1jat_A Ubiquitin-conjugating e 100.0 5.9E-52 2E-56 296.6 14.7 149 3-151 4-152 (155)
20 3k9o_A Ubiquitin-conjugating e 100.0 2.2E-51 7.7E-56 304.7 18.2 151 1-151 2-156 (201)
21 1fxt_A Ubiquitin-conjugating e 100.0 9.2E-52 3.1E-56 293.9 14.7 146 5-150 2-149 (149)
22 1yrv_A Ubiquitin-conjugating l 100.0 1.5E-51 5.1E-56 297.8 14.8 146 1-147 20-168 (169)
23 3bzh_A Ubiquitin-conjugating e 100.0 1.9E-50 6.3E-55 297.7 19.5 147 3-149 47-193 (194)
24 2pwq_A Ubiquitin conjugating e 100.0 5.9E-51 2E-55 304.5 17.1 149 2-150 21-170 (216)
25 3rz3_A Ubiquitin-conjugating e 100.0 1.1E-50 3.8E-55 296.9 17.9 151 1-151 3-174 (183)
26 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.3E-50 4.3E-55 298.2 17.6 148 3-150 31-192 (193)
27 1wzv_A Ubiquitin-conjugating e 100.0 1.6E-50 5.4E-55 289.2 17.3 149 2-151 2-152 (155)
28 3e46_A Ubiquitin-conjugating e 100.0 6E-50 2E-54 305.0 19.2 151 1-151 54-208 (253)
29 2y9m_A Ubiquitin-conjugating e 100.0 7.8E-50 2.7E-54 289.8 18.0 150 1-150 3-168 (172)
30 3fn1_B NEDD8-conjugating enzym 100.0 2.3E-49 7.9E-54 286.3 18.2 147 3-150 13-167 (167)
31 2awf_A Ubiquitin-conjugating e 100.0 4.8E-50 1.7E-54 290.8 14.3 143 2-144 15-172 (172)
32 1y8x_A Ubiquitin-conjugating e 100.0 1.5E-49 5E-54 285.3 16.6 144 3-149 5-149 (160)
33 2nvu_C NEDD8-conjugating enzym 100.0 3.1E-49 1.1E-53 288.3 16.5 145 2-149 24-169 (180)
34 1tte_A Ubiquitin-conjugating e 100.0 6.1E-50 2.1E-54 298.8 12.9 147 4-150 2-150 (215)
35 2onu_A Ubiquitin-conjugating e 100.0 1.9E-49 6.5E-54 282.6 10.7 145 4-151 2-148 (152)
36 2z5d_A Ubiquitin-conjugating e 100.0 3.6E-49 1.2E-53 287.3 12.3 146 1-150 20-169 (179)
37 1c4z_D UBCH7, ubiquitin conjug 100.0 6.8E-49 2.3E-53 280.5 11.2 145 5-150 3-149 (154)
38 3o2u_A NEDD8-conjugating enzym 100.0 1.2E-47 4E-52 282.1 15.6 144 3-149 28-178 (190)
39 1yf9_A Ubiquitin carrier prote 100.0 6.2E-48 2.1E-52 279.4 13.3 143 4-150 12-156 (171)
40 4ddg_A Ubiquitin-conjugating e 100.0 3.9E-47 1.3E-51 306.9 18.8 149 3-151 2-150 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 1.5E-47 5.2E-52 276.7 11.7 143 1-143 5-164 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 4.2E-44 1.4E-48 255.7 9.8 130 3-133 20-156 (156)
43 2fo3_A Ubiquitin-conjugating e 100.0 3.4E-43 1.2E-47 242.9 13.4 118 1-119 4-122 (125)
44 3ceg_A Baculoviral IAP repeat- 100.0 4.1E-43 1.4E-47 274.4 15.0 150 1-150 73-243 (323)
45 2a4d_A Ubiquitin-conjugating e 100.0 1.4E-42 4.7E-47 248.5 13.3 126 2-127 23-156 (160)
46 1jat_B Ubiquitin-conjugating e 100.0 9.7E-44 3.3E-48 249.5 6.4 129 1-130 2-138 (138)
47 2h2y_A Ubiquitin-conjugating e 100.0 5.2E-42 1.8E-46 240.1 14.7 115 4-118 20-135 (136)
48 2a7l_A Hypothetical ubiquitin- 100.0 1.2E-41 4.1E-46 238.0 12.1 113 1-114 20-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 7.9E-42 2.7E-46 246.9 8.7 125 3-127 34-166 (170)
50 1zuo_A Hypothetical protein LO 100.0 1.9E-41 6.4E-46 248.3 3.8 142 1-150 24-182 (186)
51 2f4w_A Ubiquitin-conjugating e 100.0 7.1E-39 2.4E-43 234.8 15.2 117 3-121 13-132 (187)
52 2z6o_A UFM1-conjugating enzyme 100.0 1.4E-30 4.8E-35 184.4 1.7 101 1-107 21-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.1E-20 7.1E-25 133.3 10.3 114 6-120 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 1.6E-21 5.5E-26 135.2 0.4 95 6-106 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 4.9E-15 1.7E-19 103.8 7.0 80 29-114 49-137 (146)
56 2ebm_A RWD domain-containing p 96.8 0.01 3.5E-07 39.7 8.7 67 6-74 12-78 (128)
57 3zqs_A E3 ubiquitin-protein li 96.3 0.05 1.7E-06 39.1 9.9 82 7-113 4-86 (186)
58 2day_A Ring finger protein 25; 96.3 0.041 1.4E-06 36.7 8.9 68 7-74 11-82 (128)
59 2yz0_A Serine/threonine-protei 95.7 0.12 4.2E-06 34.8 9.3 68 6-74 12-85 (138)
60 2daw_A RWD domain containing p 94.0 0.26 8.8E-06 34.1 7.5 24 52-75 76-99 (154)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 93.6 0.45 1.5E-05 31.8 7.9 68 6-74 12-86 (137)
62 2ebk_A RWD domain-containing p 93.0 0.21 7.1E-06 33.2 5.4 66 8-74 11-79 (128)
63 2dax_A Protein C21ORF6; RWD do 91.0 0.18 6.3E-06 34.6 3.4 25 51-75 73-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 85.9 0.72 2.4E-05 21.4 2.3 21 4-24 5-25 (26)
65 2cwb_A Chimera of immunoglobul 73.3 0.7 2.4E-05 30.2 0.0 32 114-145 19-50 (108)
66 2fkn_A Urocanate hydratase; ro 68.5 7.4 0.00025 32.0 4.9 28 124-151 278-305 (552)
67 1x87_A Urocanase protein; stru 67.8 7.8 0.00027 31.9 4.9 28 124-151 277-304 (551)
68 1uwk_A Urocanate hydratase; hy 67.6 8 0.00027 31.9 5.0 28 124-151 282-309 (557)
69 2jrw_A Cyclic extended PEP.1; 35.7 12 0.00041 17.2 0.7 17 64-80 4-20 (26)
70 3rls_A YAF9, protein AF-9 homo 35.6 1.1E+02 0.0037 21.4 5.9 46 31-78 30-75 (175)
71 2f4m_B UV excision repair prot 32.4 48 0.0017 19.0 3.1 20 122-141 37-56 (61)
72 1u9d_A Hypothetical protein VC 31.7 86 0.0029 20.5 4.6 29 5-33 32-60 (122)
73 3pft_A Flavin reductase; desul 30.4 30 0.001 23.4 2.3 68 11-95 5-75 (157)
74 2bum_A Protocatechuate 3,4-dio 30.1 46 0.0016 23.9 3.3 25 49-73 109-138 (209)
75 1pve_A HHR23B, UV excision rep 30.1 49 0.0017 19.7 2.9 21 122-142 39-59 (72)
76 2rf4_B DNA-directed RNA polyme 25.3 37 0.0013 20.9 1.8 13 4-16 62-74 (87)
77 3qrl_A Transcription initiatio 23.0 1.8E+02 0.006 19.5 5.6 44 33-78 32-78 (140)
78 2ccv_A Helix pomatia agglutini 22.5 1.3E+02 0.0045 18.7 4.1 25 49-74 27-51 (101)
79 2ecu_A Flavin reductase (HPAC) 21.4 25 0.00086 23.4 0.5 31 65-95 40-73 (149)
80 2c5k_P Vacuolar protein sortin 20.9 54 0.0018 15.4 1.5 14 5-18 11-24 (26)
No 1
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=5.8e-54 Score=306.10 Aligned_cols=152 Identities=95% Similarity=1.537 Sum_probs=147.8
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
||+.|.+||++|+++++++++.|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhcC
Q 031839 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 152 (152)
Q Consensus 81 v~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~~ 152 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++++++.+
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~~ 152 (152)
T 2aak_A 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152 (152)
T ss_dssp BCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC--
T ss_pred CCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754
No 2
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-54 Score=310.40 Aligned_cols=150 Identities=64% Similarity=1.204 Sum_probs=146.7
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
||+.|.+||++||++|+++++.||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++++++
T Consensus 81 I~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 81 VYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp BCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999885
No 3
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-53 Score=307.71 Aligned_cols=150 Identities=40% Similarity=0.851 Sum_probs=145.2
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecC-CCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQD-NSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHP 79 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~-~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hp 79 (152)
||+.|.+||++||++|+++++.||++.+.+ +|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 899999999999999999999999999965 7999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEecCc-------------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH
Q 031839 80 NIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 146 (152)
Q Consensus 80 nv~~~G~ic~~~l-------------~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~ 146 (152)
||+.+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++||++++
T Consensus 81 Nv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~ 160 (165)
T 2ucz_A 81 NIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSIL 160 (165)
T ss_dssp TBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9999999999999 678999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 031839 147 QSWT 150 (152)
Q Consensus 147 ~s~~ 150 (152)
+|++
T Consensus 161 ~~~~ 164 (165)
T 2ucz_A 161 KSLG 164 (165)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9986
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=5.8e-53 Score=300.60 Aligned_cols=149 Identities=42% Similarity=0.834 Sum_probs=145.6
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv 81 (152)
++.|.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.||+++|++|+++|.++||+|+++++.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 82 NKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999874
No 5
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-53 Score=304.03 Aligned_cols=149 Identities=34% Similarity=0.695 Sum_probs=145.8
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
||+.+.+||++||++|++++++||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 10 ~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 89 (158)
T 1zdn_A 10 LPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPN 89 (158)
T ss_dssp SCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031839 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 81 v~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.||+++|++|+++|.++||+|+++++
T Consensus 90 v~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 90 VGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp BCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999874
No 6
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-53 Score=304.53 Aligned_cols=151 Identities=36% Similarity=0.720 Sum_probs=145.1
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
||..+.+||++||++|+++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 81 v~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++||+|+++++..
T Consensus 82 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 82 VDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp BCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998753
No 7
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.4e-52 Score=302.41 Aligned_cols=149 Identities=41% Similarity=0.846 Sum_probs=144.4
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCC-CcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQDN-SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~~-n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
|+.|.+||++||++++++++.||++.+.++ |++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 a~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 1 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 467899999999999999999999999765 9999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
Q 031839 81 IYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 147 (152)
Q Consensus 81 v~~~G~ic~~~l~-------------~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~ 147 (152)
|+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+++++
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 160 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 160 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999997 789999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 031839 148 SWT 150 (152)
Q Consensus 148 s~~ 150 (152)
|++
T Consensus 161 s~~ 163 (164)
T 3h8k_A 161 SLG 163 (164)
T ss_dssp HHT
T ss_pred hhc
Confidence 986
No 8
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.4e-52 Score=297.21 Aligned_cols=149 Identities=45% Similarity=0.895 Sum_probs=145.0
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv 81 (152)
|+.+.+||++|+++++++++.|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++++++
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999998763
No 9
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-52 Score=300.43 Aligned_cols=148 Identities=41% Similarity=0.858 Sum_probs=144.1
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv 81 (152)
++.+.+||++|+++|+++++.||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 19 FQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031839 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 82 ~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++
T Consensus 99 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 99 NSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999864
No 10
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-52 Score=298.66 Aligned_cols=150 Identities=39% Similarity=0.743 Sum_probs=145.0
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
|++.+.+||++|+++|+++++.||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 85 (156)
T 2e2c_A 6 ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPN 85 (156)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 81 v~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.||+++| +|+++|.++||+++++++..
T Consensus 86 v~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 86 VDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred CccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999 89999999999999998753
No 11
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=6.7e-52 Score=298.81 Aligned_cols=149 Identities=46% Similarity=0.914 Sum_probs=144.9
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv 81 (152)
++.+.+||++|+++++++++.||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV 96 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 96 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++++++
T Consensus 97 ~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 97 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999998763
No 12
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=3.7e-52 Score=298.17 Aligned_cols=150 Identities=39% Similarity=0.757 Sum_probs=143.1
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQD-----NSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~-----~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~ 75 (152)
||+.+.+||++|+++++++++.|+++.|.+ +|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 898999999999999999999999999864 489999999999999999999999999999999999999999999
Q ss_pred cccccccCCCceEecCcCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 76 MFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 76 i~Hpnv~~~G~ic~~~l~~--~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+|||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++++++
T Consensus 81 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999987 79999999999999999999999999999999999999999999999999998864
No 13
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=6.9e-52 Score=297.34 Aligned_cols=150 Identities=32% Similarity=0.646 Sum_probs=145.2
Q ss_pred CChHHHHHHHHHHHHHhcC---CCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccc
Q 031839 1 MSTPARKRLMRDFKRLQQD---PPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~---~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~ 77 (152)
||+.+.+||++|+++|+++ ++.|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 7888999999999999985 5789999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 78 Hpnv~-~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999 59999999999999999999999999999999999999999999999999999999999999999875
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-51 Score=298.51 Aligned_cols=149 Identities=36% Similarity=0.701 Sum_probs=145.4
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv 81 (152)
|+.+.+||++|+++|+++++.||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEecCcC----CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 82 YADGSICLDILQ----NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~ic~~~l~----~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.||+++|++|+++|.++||+++++++.
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 999999999998 899999999999999999999999999999999999999999999999999999875
No 15
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.5e-52 Score=295.41 Aligned_cols=146 Identities=38% Similarity=0.779 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCC
Q 031839 5 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~~~ 84 (152)
+.+||++|+++++++++.|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 85 G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+++++++.
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999875
No 16
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-51 Score=297.02 Aligned_cols=148 Identities=41% Similarity=0.816 Sum_probs=142.3
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCC-----CcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM 76 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~~-----n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i 76 (152)
|..|.+||++||+++++++++||++.|.++ |++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 468999999999999999999999999765 899999999999999999999999999999999999999999999
Q ss_pred ccccccCCCceEecCcCCC--CCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031839 77 FHPNIYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 77 ~Hpnv~~~G~ic~~~l~~~--W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
|||||+.+|.||+++|... |+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999764 999999999999999999999999999999999999999999999999999875
No 17
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=9.6e-52 Score=297.11 Aligned_cols=151 Identities=40% Similarity=0.798 Sum_probs=144.9
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQD-----NSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~-----~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~ 75 (152)
||+.+.+||++|+++|+++++.|+++.+.. +|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 888899999999999999999999999853 689999999999999999999999999999999999999999999
Q ss_pred cccccccCCCceEecCcCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 76 MFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 76 i~Hpnv~~~G~ic~~~l~~--~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
+|||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+++++++++
T Consensus 84 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 84 LFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred cccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999975 899999999999999999999999999999999999999999999999999998763
No 18
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-52 Score=302.88 Aligned_cols=149 Identities=37% Similarity=0.699 Sum_probs=143.1
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
|++.+.+||++||++|+++++.||++.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 106 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPN 106 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++| +|+++|.++|+++++++.+
T Consensus 107 V~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~ 175 (179)
T 1i7k_A 107 VDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVT 175 (179)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC
T ss_pred cccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999 9999999999999998865
No 19
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=5.9e-52 Score=296.56 Aligned_cols=149 Identities=35% Similarity=0.741 Sum_probs=144.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q 031839 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~ 82 (152)
+.+.+||++|+++|++++++||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 83 ~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++.
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 84 RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999998753
No 20
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=2.2e-51 Score=304.69 Aligned_cols=151 Identities=32% Similarity=0.647 Sum_probs=144.2
Q ss_pred CChHHHHHHHHHHHHHhcC---CCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccc
Q 031839 1 MSTPARKRLMRDFKRLQQD---PPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~---~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~ 77 (152)
||+.|.+||++||++|+++ ++.||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 8999999999999999987 3679999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 78 Hpnv~-~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++..
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999 599999999999999999999999999999999999999999999999999999999999999998753
No 21
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=9.2e-52 Score=293.87 Aligned_cols=146 Identities=33% Similarity=0.698 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCC-CcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q 031839 5 ARKRLMRDFKRLQQDPPAGISGAPQDN-SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA 83 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~gi~~~~~~~-n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~~ 83 (152)
+.+||++|++++++++++|+++.+.++ |++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 569999999999999999999999877 9999999999999999999999999999999999999999999999999997
Q ss_pred -CCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 84 -DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 84 -~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999998763
No 22
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-51 Score=297.83 Aligned_cols=146 Identities=33% Similarity=0.658 Sum_probs=141.6
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
|++.|.+||++||++|++++++||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCCCceEecCcC--CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
Q 031839 81 I-YADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 147 (152)
Q Consensus 81 v-~~~G~ic~~~l~--~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~ 147 (152)
| +.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++ |++|++
T Consensus 100 I~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp BCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9 799999999998 89999999999999999999999999999999999999999999999 999875
No 23
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.9e-50 Score=297.68 Aligned_cols=147 Identities=37% Similarity=0.730 Sum_probs=143.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q 031839 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~ 82 (152)
+.+.+||++||++|+++++.||++.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|++|||||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031839 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 83 ~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
.+|.||+++|.++|+|.++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++
T Consensus 127 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya 193 (194)
T 3bzh_A 127 SQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 193 (194)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999876
No 24
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=5.9e-51 Score=304.50 Aligned_cols=149 Identities=35% Similarity=0.747 Sum_probs=145.0
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv 81 (152)
++.+.+||++||++|+++++.||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 100 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNI 100 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 82 Y-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~-~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 101 ~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 101 SSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp CTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred cCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9 68999999999999999999999999999999999999999999999999999999999999999875
No 25
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.1e-50 Score=296.92 Aligned_cols=151 Identities=39% Similarity=0.783 Sum_probs=143.1
Q ss_pred CC-hHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccc
Q 031839 1 MS-TPARKRLMRDFKRLQQDPPAGISGA-PQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 1 Ms-~~a~~RL~~E~~~l~~~~~~gi~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~H 78 (152)
|+ +.|.+||++||++|+++++.||++. ++++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 44 5789999999999999999999999 678899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH------CHHHHHH
Q 031839 79 PNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE------NKREYNR 139 (152)
Q Consensus 79 pnv~~~G~ic~~~l~-------------~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~------~~~~f~~ 139 (152)
|||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.||+.+|++ |+++|.+
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~ 162 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTD 162 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHH
Confidence 999999999999996 789999999999999999999999999999999999998 8899999
Q ss_pred HHHHHHHHhhhc
Q 031839 140 RVREIVEQSWTA 151 (152)
Q Consensus 140 ~~~~~~~~s~~~ 151 (152)
+||++|++|+++
T Consensus 163 ~v~~~v~~s~~~ 174 (183)
T 3rz3_A 163 IIRKQVLGTKVD 174 (183)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 26
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-50 Score=298.24 Aligned_cols=148 Identities=36% Similarity=0.711 Sum_probs=140.3
Q ss_pred hHHHHHHHHHHHHHhcCCC-------------CCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCe
Q 031839 3 TPARKRLMRDFKRLQQDPP-------------AGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPT 69 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~-------------~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~ 69 (152)
+.+.+||++||++|+++++ .||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 3578999999999999887 799999999999999999999999999999999999999999999999
Q ss_pred eeEeccccccccc-CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHh
Q 031839 70 VRFVSRMFHPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 148 (152)
Q Consensus 70 i~f~t~i~Hpnv~-~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s 148 (152)
|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 111 V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~y 190 (193)
T 2f4z_A 111 MKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETF 190 (193)
T ss_dssp EEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence 9999999999999 699999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hh
Q 031839 149 WT 150 (152)
Q Consensus 149 ~~ 150 (152)
++
T Consensus 191 a~ 192 (193)
T 2f4z_A 191 AK 192 (193)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.6e-50 Score=289.19 Aligned_cols=149 Identities=27% Similarity=0.669 Sum_probs=142.2
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEE-eecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISG-APQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~-~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
|..+.+||++|+++|+++++.|+++ .+.++|++.|+++|. |+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~m~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (155)
T 1wzv_A 2 SHMASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPN 80 (155)
T ss_dssp ---CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cchHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCc
Confidence 4458899999999999999999999 788999999999999 99999999999999999999999999999999999999
Q ss_pred ccCCCceEecCc-CCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 81 IYADGSICLDIL-QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 81 v~~~G~ic~~~l-~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
|+.+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++++++.
T Consensus 81 V~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 81 VDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp BCTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999 89999999999999999999999999999999999999999999999999999998763
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=6e-50 Score=305.01 Aligned_cols=151 Identities=32% Similarity=0.647 Sum_probs=145.7
Q ss_pred CChHHHHHHHHHHHHHhcC---CCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccc
Q 031839 1 MSTPARKRLMRDFKRLQQD---PPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~---~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~ 77 (152)
||+.|.+||++||++|+++ ++.||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 7889999999999999987 4679999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 78 Hpnv~-~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
||||+ .+|.||+++|.++|+|.++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++||+|+++++..
T Consensus 134 HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 134 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp BTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999 599999999999999999999999999999999999999999999999999999999999999998753
No 29
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=7.8e-50 Score=289.84 Aligned_cols=150 Identities=26% Similarity=0.607 Sum_probs=141.1
Q ss_pred CChHHHHHHHHHHHHHhc-C-C------CC---CeEEee-cCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCC
Q 031839 1 MSTPARKRLMRDFKRLQQ-D-P------PA---GISGAP-QDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPP 68 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~-~-~------~~---gi~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP 68 (152)
||+.+.+||++||++|++ + + +. |+.+.+ .++|++.|+++|.||+||||+||.|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 888999999999999998 4 3 33 467788 7889999999999999999999999999999999999999
Q ss_pred eeeEec-cccccccc-CCCceEecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH-CHHHHHHHHHHH
Q 031839 69 TVRFVS-RMFHPNIY-ADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE-NKREYNRRVREI 144 (152)
Q Consensus 69 ~i~f~t-~i~Hpnv~-~~G~ic~~~l~-~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~-~~~~f~~~~~~~ 144 (152)
+|+|.| ++|||||+ .+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++ |+++|.++||+|
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~ 162 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYF 162 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999 99999996 89999999998 899999999999999999999999999999999999999 999999999999
Q ss_pred HHHhhh
Q 031839 145 VEQSWT 150 (152)
Q Consensus 145 ~~~s~~ 150 (152)
+++++.
T Consensus 163 ~~~~~~ 168 (172)
T 2y9m_A 163 LAERER 168 (172)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 999874
No 30
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.3e-49 Score=286.30 Aligned_cols=147 Identities=24% Similarity=0.527 Sum_probs=140.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEee-cCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q 031839 3 TPARKRLMRDFKRLQQDPPAGISGAP-QDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~gi~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv 81 (152)
+.+.+||++||++|+++++.||++.+ .++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 56899999999999999999999996 567899999999 9999999999999999999999999999999999999999
Q ss_pred cCCCceEecCcCC------CCCCcCCHHHHHHHHHHhhcC-CCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 82 YADGSICLDILQN------QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~ic~~~l~~------~W~p~~~i~~il~~l~~~l~~-p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|.. +|+|+++|.+||.+|+++|.+ |++++|+|.||+++|++|+++|.++||+|++++++
T Consensus 92 ~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 92 TETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999975 799999999999999999999 79999999999999999999999999999999864
No 31
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.8e-50 Score=290.84 Aligned_cols=143 Identities=38% Similarity=0.804 Sum_probs=110.4
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEeecC-CCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGAPQD-NSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~~~~-~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
++.+.+||++||++|+++++.||++.+.+ +|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 35789999999999999999999999865 79999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHH-HHHHHHHHH
Q 031839 81 IYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREI 144 (152)
Q Consensus 81 v~~~G~ic~~~l~-------------~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~-~f~~~~~~~ 144 (152)
|+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|++ +|.++||+|
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999999996 689999999999999999999999999999999999999999 999999986
No 32
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-49 Score=285.35 Aligned_cols=144 Identities=28% Similarity=0.675 Sum_probs=138.4
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccc
Q 031839 3 TPARKRLMRDFKRLQQDPPAGISGA-PQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~gi~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv 81 (152)
+.+.+||++|++++ ++++|+++. ++++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 46889999999999 567899998 7889999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031839 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 82 ~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++.++
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~~ 149 (160)
T 1y8x_A 82 DLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGY 149 (160)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSEE
T ss_pred CCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998764
No 33
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-49 Score=288.28 Aligned_cols=145 Identities=28% Similarity=0.648 Sum_probs=139.4
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAGISGA-PQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~gi~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpn 80 (152)
++.+.+||++|+++| ++++|+++. +.++|++.|+++| ||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 467899999999999 577899998 7899999999998 999999999999999999999999999999999999999
Q ss_pred ccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031839 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 81 v~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++.++
T Consensus 101 V~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~~ 169 (180)
T 2nvu_C 101 IDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGY 169 (180)
T ss_dssp BCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSEE
T ss_pred CCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999765
No 34
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=6.1e-50 Score=298.82 Aligned_cols=147 Identities=33% Similarity=0.698 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCC-cceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q 031839 4 PARKRLMRDFKRLQQDPPAGISGAPQDNS-IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~gi~~~~~~~n-~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~ 82 (152)
++.+||++|++++++++++||++.+.++| ++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999997765 56999999999999999999999999999999999999999999999999
Q ss_pred C-CCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 83 A-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~-~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
. +|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++.
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~ 150 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 150 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 8 9999999999999999999999999999999999999999999999999999999999999998875
No 35
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.9e-49 Score=282.61 Aligned_cols=145 Identities=30% Similarity=0.679 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc-
Q 031839 4 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY- 82 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~- 82 (152)
+|.+||++|++++++. |+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 4679999999999874 788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEecCcCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 83 ADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 83 ~~G~ic~~~l~~~W~p~~~i~~il~~-l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
.+|.||+++|.++|+|+++|.+||.+ |+++|.+|++++|+|.+|+++|++|+++|.++||+++++++..
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 59999999999999999999999998 6899999999999999999999999999999999999998753
No 36
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-49 Score=287.26 Aligned_cols=146 Identities=32% Similarity=0.729 Sum_probs=137.0
Q ss_pred CCh--HHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccc
Q 031839 1 MST--PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 1 Ms~--~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~H 78 (152)
||+ .+.+||++||++|++ +|+++.+. +|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~H 95 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFH 95 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCcc
Confidence 554 589999999999985 48888887 678999999999999999999999999999999999999999999999
Q ss_pred ccccC-CCceEecCcCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 79 PNIYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 79 pnv~~-~G~ic~~~l~~~W~p~~~i~~il~~-l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|||+. +|.||+++|.++|+|+++|.+||.+ |+++|.+|++++|+|.+|+++|++|+++|.++||+++++++.
T Consensus 96 PNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 96 PNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99997 9999999999999999999999999 999999999999999999999999999999999999999875
No 37
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=6.8e-49 Score=280.47 Aligned_cols=145 Identities=26% Similarity=0.714 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEee-cCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccccC
Q 031839 5 ARKRLMRDFKRLQQDPPAGISGAP-QDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA 83 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~gi~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~~ 83 (152)
|.+||++|+++|+++++.|+++.+ .++|++.|+++|. |+||||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 679999999999999999998665 6789999999997 99999999999999999999999999999999999999999
Q ss_pred CCceEecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 84 DGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 84 ~G~ic~~~l~-~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++++++
T Consensus 82 ~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (154)
T 1c4z_D 82 KGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149 (154)
T ss_dssp TCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC--
T ss_pred CCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 9999999996 789999999999999999999999999999999999999999999999999998875
No 38
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.2e-47 Score=282.14 Aligned_cols=144 Identities=34% Similarity=0.683 Sum_probs=137.9
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEe----ecCCCcc---eEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031839 3 TPARKRLMRDFKRLQQDPPAGISGA----PQDNSIM---LWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~gi~~~----~~~~n~~---~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~ 75 (152)
+.|.+||++||++|+ +++|+++. ++++|++ .|+++|. |++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 578999999999998 67899998 8899999 9999995 888999999999999999999999999999999
Q ss_pred cccccccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031839 76 MFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 76 i~Hpnv~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
+|||||+.+|.||+++|.++|+|.++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++||+|++.+.
T Consensus 105 i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred cccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997653
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-48 Score=279.36 Aligned_cols=143 Identities=31% Similarity=0.654 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc-
Q 031839 4 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY- 82 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~- 82 (152)
.+.+||++||++|++++. ++ +.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 578999999999999874 44 3578999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEecCcCCCCCCcCCHHHHHHHH-HHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031839 83 ADGSICLDILQNQWSPIYDVAAILTSI-QSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~~G~ic~~~l~~~W~p~~~i~~il~~l-~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
.+|.||+++|.++|+|+++|.+||.+| +++|.+|++++|+|.+|+++|++|+++|.++||+++++++.
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 599999999999999999999999997 79999999999999999999999999999999999998864
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=3.9e-47 Score=306.95 Aligned_cols=149 Identities=45% Similarity=0.887 Sum_probs=145.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q 031839 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~ 82 (152)
+.|.+||++|+++|++++++|+++.|.++|++.|+++|.||+||||+||.|++.|.||++||++||+|+|.|++|||||+
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 83 ~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++..
T Consensus 82 ~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 82 SNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp TTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999998753
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.5e-47 Score=276.71 Aligned_cols=143 Identities=25% Similarity=0.578 Sum_probs=135.3
Q ss_pred CChHHHHHHHHHHHHHhcCC------------CCCeEEeecCCCcceEEEEEecCCCCCCC--CcEEEEEEEeCCCCCCC
Q 031839 1 MSTPARKRLMRDFKRLQQDP------------PAGISGAPQDNSIMLWNAVIFGPDDTPWD--GGTFKLTLQFTEDYPNK 66 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~------------~~gi~~~~~~~n~~~w~~~i~gp~~tpy~--gg~f~~~i~~p~~YP~~ 66 (152)
||+.+.+||++||++|++++ +.|+++.+.++|++.|+++|.||+||||+ ||.|++.|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 88899999999999999977 67999999999999999999999999999 99999999999999999
Q ss_pred CCeeeEecccccccccCCCceEecCcCCCCCCcCCHHHHH-HHHHHhhcC--CCCCCCCCHHHHHHHHHCHHHHHHHHHH
Q 031839 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCD--PNPNSPANSEAARMFSENKREYNRRVRE 143 (152)
Q Consensus 67 pP~i~f~t~i~Hpnv~~~G~ic~~~l~~~W~p~~~i~~il-~~l~~~l~~--p~~~~p~n~ea~~~~~~~~~~f~~~~~~ 143 (152)
||+|+|.|++|||||+.+|.||+++|.++|+|++++.++| ..|++++.+ |++++|+|.||+++|++|+++|.++||+
T Consensus 85 pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp CCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred CCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 9999999999999999999999999999999999999975 567777764 8999999999999999999999999984
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=4.2e-44 Score=255.70 Aligned_cols=130 Identities=25% Similarity=0.519 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHHhcC-CCCCeEEeecC-C--CcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccc
Q 031839 3 TPARKRLMRDFKRLQQD-PPAGISGAPQD-N--SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~-~~~gi~~~~~~-~--n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~H 78 (152)
.++.+||++|+++++++ ++.|+++.+.+ + |++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 99 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEM 99 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccccc
Confidence 46889999999999998 78899999843 3 59999999999999999999999999999999999999999999999
Q ss_pred ccccCCCce---EecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHC
Q 031839 79 PNIYADGSI---CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSEN 133 (152)
Q Consensus 79 pnv~~~G~i---c~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~ 133 (152)
|||+.+|.| |++++. +|+|+++|.+||.+|+++|.+|++++|+|++|+++|++|
T Consensus 100 PNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 100 SCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp TTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 999999999 888886 599999999999999999999999999999999998765
No 43
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-43 Score=242.91 Aligned_cols=118 Identities=28% Similarity=0.624 Sum_probs=106.4
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccc-ccc
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHP 79 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i-~Hp 79 (152)
|+ .|.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++ |||
T Consensus 4 m~-~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 82 (125)
T 2fo3_A 4 MG-NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHT 82 (125)
T ss_dssp ------CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBT
T ss_pred ch-HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCC
Confidence 54 4789999999999999999999999999999999999999999999999999999999999999999999996 999
Q ss_pred cccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCCC
Q 031839 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119 (152)
Q Consensus 80 nv~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~ 119 (152)
||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|+.+
T Consensus 83 nv~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 83 HVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred cCCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999999999999999865
No 44
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=4.1e-43 Score=274.37 Aligned_cols=150 Identities=29% Similarity=0.590 Sum_probs=139.4
Q ss_pred CChHHHHHHHHHHHHHhcCCCCC----eEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc-
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAG----ISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR- 75 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~g----i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~- 75 (152)
||+.+.+||++|+++|+++++.| +.+.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~ 152 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTG 152 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCST
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccC
Confidence 67889999999999999987764 5677889999999999999999999999999999999999999999999998
Q ss_pred ----cccccccCCCceEecCcC-------CCCCCcC-CHHHHHHHHHHhhc--CCCCCCCCCHHH--HHHHHHCHHHHHH
Q 031839 76 ----MFHPNIYADGSICLDILQ-------NQWSPIY-DVAAILTSIQSLLC--DPNPNSPANSEA--ARMFSENKREYNR 139 (152)
Q Consensus 76 ----i~Hpnv~~~G~ic~~~l~-------~~W~p~~-~i~~il~~l~~~l~--~p~~~~p~n~ea--~~~~~~~~~~f~~ 139 (152)
+|||||+.+|.||+++|. ++|+|++ +|.+||.+|+++|. +|++++|+|.++ +.++.+|+++|.+
T Consensus 153 g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~ 232 (323)
T 3ceg_A 153 GHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDG 232 (323)
T ss_dssp TTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHH
T ss_pred CCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHH
Confidence 999999999999999997 6899999 89999999999996 777799999987 6899999999999
Q ss_pred HHHHHHHHhhh
Q 031839 140 RVREIVEQSWT 150 (152)
Q Consensus 140 ~~~~~~~~s~~ 150 (152)
+||+++.+++.
T Consensus 233 ~vr~~t~k~A~ 243 (323)
T 3ceg_A 233 NIRQATVKWAM 243 (323)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 99999998653
No 45
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.4e-42 Score=248.51 Aligned_cols=126 Identities=23% Similarity=0.518 Sum_probs=117.7
Q ss_pred ChHHHHHHHHHHHHHhcCCCCC-eEEee-cCCC--cceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccc
Q 031839 2 STPARKRLMRDFKRLQQDPPAG-ISGAP-QDNS--IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 2 s~~a~~RL~~E~~~l~~~~~~g-i~~~~-~~~n--~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~ 77 (152)
..++.+||++|++++++++++| +++.+ .++| ++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 23 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 102 (160)
T 2a4d_A 23 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 102 (160)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred echHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCce
Confidence 3578899999999999999888 77777 4554 899999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCceEecCcC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCCCHHHH
Q 031839 78 HPNIY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPNSPANSEAA 127 (152)
Q Consensus 78 Hpnv~-~~G~ic~~~l~--~~W~p~~~i~~il~~l~~~l~-~p~~~~p~n~ea~ 127 (152)
||||+ .+|.||++++. ++|+|+++|++||.+|+++|. +|++++|+|.|||
T Consensus 103 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 103 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp CTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred eCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 99999 79999999997 899999999999999999995 7999999999987
No 46
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=9.7e-44 Score=249.51 Aligned_cols=129 Identities=22% Similarity=0.550 Sum_probs=115.9
Q ss_pred CCh-HHHHHHHHHHHHHhcC-CCCCeEEeecC-C--CcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031839 1 MST-PARKRLMRDFKRLQQD-PPAGISGAPQD-N--SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~-~a~~RL~~E~~~l~~~-~~~gi~~~~~~-~--n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~ 75 (152)
||+ .+.+||++|+++++++ ++.|+++.+.+ + |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 774 6779999999999998 78899999843 3 48999999999999999999999999999999999999999999
Q ss_pred cccccccCC-Cce--EecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 031839 76 MFHPNIYAD-GSI--CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 130 (152)
Q Consensus 76 i~Hpnv~~~-G~i--c~~~l~~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~ 130 (152)
+|||||+.+ |.| |++++. +|+|+++|.+||.+|+++|.+|++++|+|++|+++|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999975 999 898876 899999999999999999999999999999988654
No 47
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.2e-42 Score=240.06 Aligned_cols=115 Identities=25% Similarity=0.613 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccc-cccccc
Q 031839 4 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIY 82 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i-~Hpnv~ 82 (152)
.+.+||++|+++++++++.|+++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++ |||||+
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 99 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVY 99 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999996 999999
Q ss_pred CCCceEecCcCCCCCCcCCHHHHHHHHHHhhcCCCC
Q 031839 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118 (152)
Q Consensus 83 ~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~~p~~ 118 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|+.
T Consensus 100 ~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 100 SNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 999999999999999999999999999999999875
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-41 Score=237.96 Aligned_cols=113 Identities=37% Similarity=0.727 Sum_probs=107.5
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCeEEe--ecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccc-
Q 031839 1 MSTPARKRLMRDFKRLQQDPPAGISGA--PQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF- 77 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~gi~~~--~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~- 77 (152)
||+.+ +||++|++++++++++|+++. +.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~-~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~ 98 (136)
T 2a7l_A 20 MASMQ-KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIP 98 (136)
T ss_dssp GTTSC-HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCC
T ss_pred ccHHH-HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcC
Confidence 66544 999999999999999999965 78999999999999999999999999999999999999999999999999
Q ss_pred -cccccCCCceEecCcCCCCCCcCCHHHHHHHHHHhhc
Q 031839 78 -HPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 114 (152)
Q Consensus 78 -Hpnv~~~G~ic~~~l~~~W~p~~~i~~il~~l~~~l~ 114 (152)
||||+.+|.||+++|.++|+|+++|++||.+|+++|.
T Consensus 99 ~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 99 VHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999874
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=7.9e-42 Score=246.94 Aligned_cols=125 Identities=23% Similarity=0.522 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCC-eEEee-cCCC--cceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccc
Q 031839 3 TPARKRLMRDFKRLQQDPPAG-ISGAP-QDNS--IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~g-i~~~~-~~~n--~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~H 78 (152)
.++.+||++||+++++++++| +++.+ +++| ++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 457899999999999998888 67776 4554 8999999999999999999999999999999999999999999999
Q ss_pred cccc-CCCceEecCcC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCCCHHHH
Q 031839 79 PNIY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPNSPANSEAA 127 (152)
Q Consensus 79 pnv~-~~G~ic~~~l~--~~W~p~~~i~~il~~l~~~l~-~p~~~~p~n~ea~ 127 (152)
|||+ .+|.||++++. ++|+|+++|.+||.+|+++|. +|+.++|+|.|||
T Consensus 114 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 9999 79999999997 899999999999999999996 6999999999987
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1.9e-41 Score=248.27 Aligned_cols=142 Identities=23% Similarity=0.451 Sum_probs=128.5
Q ss_pred CChHHHHHHHHHHHHHhcCC---CCCeEEeecCCCcceEEEEEecC-CCCCCCC-----------cEEEEEEEeCCCCCC
Q 031839 1 MSTPARKRLMRDFKRLQQDP---PAGISGAPQDNSIMLWNAVIFGP-DDTPWDG-----------GTFKLTLQFTEDYPN 65 (152)
Q Consensus 1 Ms~~a~~RL~~E~~~l~~~~---~~gi~~~~~~~n~~~w~~~i~gp-~~tpy~g-----------g~f~~~i~~p~~YP~ 65 (152)
||+.+.+||++||++|++++ +.|+++.+.++|++.|+++|.|| ++|||+| |.|+++|.||++||+
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~ 103 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPF 103 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCC
Confidence 78899999999999999988 67899999999999999999997 8999998 899999999999999
Q ss_pred CCCeeeEecccccc-cccCCCceEecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHCHHHHHHHHHH
Q 031839 66 KPPTVRFVSRMFHP-NIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143 (152)
Q Consensus 66 ~pP~i~f~t~i~Hp-nv~~~G~ic~~~l~-~~W~p~~~i~~il~~l~~~l~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~ 143 (152)
+||+|+|.|++||| ||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++.. .|..++++|.+++++
T Consensus 104 ~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~ 175 (186)
T 1zuo_A 104 DPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQ 175 (186)
T ss_dssp SCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHH
T ss_pred CCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHH
Confidence 99999999999999 69999999999997 789999999999999999999886543 344567788888888
Q ss_pred HHHHhhh
Q 031839 144 IVEQSWT 150 (152)
Q Consensus 144 ~~~~s~~ 150 (152)
++.++..
T Consensus 176 ~~~~~~~ 182 (186)
T 1zuo_A 176 QSYNSIV 182 (186)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777653
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.1e-39 Score=234.83 Aligned_cols=117 Identities=31% Similarity=0.700 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccccccc
Q 031839 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~ 82 (152)
+.+.+||++|+++|++++++||++.+.++|++.|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ ||||+
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~ 90 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFK 90 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceec
Confidence 4688999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CCCceEecCc---CCCCCCcCCHHHHHHHHHHhhcCCCCCCC
Q 031839 83 ADGSICLDIL---QNQWSPIYDVAAILTSIQSLLCDPNPNSP 121 (152)
Q Consensus 83 ~~G~ic~~~l---~~~W~p~~~i~~il~~l~~~l~~p~~~~p 121 (152)
.+|.||+++| .++|+|+++|.+||.+|+++|.+|+++..
T Consensus 91 ~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 91 CNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp TTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred cCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 9999999999 68999999999999999999999888643
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.96 E-value=1.4e-30 Score=184.42 Aligned_cols=101 Identities=21% Similarity=0.381 Sum_probs=93.4
Q ss_pred CChHH--------HHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCc----------EEEEEEEeCCC
Q 031839 1 MSTPA--------RKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGG----------TFKLTLQFTED 62 (152)
Q Consensus 1 Ms~~a--------~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg----------~f~~~i~~p~~ 62 (152)
||+.| .+||++||+.|.+ ++.+.++|+..|.+.+.||+||+|+|| .|.+++.||++
T Consensus 21 m~t~a~p~~~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~ 94 (172)
T 2z6o_A 21 LKTNAGPRDRELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPIT 94 (172)
T ss_dssp CCCCCCTTCTHHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTT
T ss_pred cccccCCCccHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCC
Confidence 67777 9999999999998 477888999999999999999999999 99999999999
Q ss_pred CCCCCCeeeEecc-cccccccCCCceEecCcC-C---CCCCcCCHHHHHH
Q 031839 63 YPNKPPTVRFVSR-MFHPNIYADGSICLDILQ-N---QWSPIYDVAAILT 107 (152)
Q Consensus 63 YP~~pP~i~f~t~-i~Hpnv~~~G~ic~~~l~-~---~W~p~~~i~~il~ 107 (152)
||.+||+|+|.+. +|||||+.+|+||++++. . .|+|.++|.++|.
T Consensus 95 YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 95 YPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 9999999999997 999999999999999994 3 4559999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.83 E-value=2.1e-20 Score=133.28 Aligned_cols=114 Identities=21% Similarity=0.337 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhcCCCC---CeEEeecCCCcceEEEEEecCCCCCCCCcE---EEEEEEeCCCCCCCCCeeeEecc----
Q 031839 6 RKRLMRDFKRLQQDPPA---GISGAPQDNSIMLWNAVIFGPDDTPWDGGT---FKLTLQFTEDYPNKPPTVRFVSR---- 75 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~---gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~---f~~~i~~p~~YP~~pP~i~f~t~---- 75 (152)
.+|..+|..++.+.-+. ...+...+|....+-+.+.|...++|+|+. |.+.|.||.+||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 36677788777664332 222333456556666666666668999998 88999999999999999988651
Q ss_pred ------cc-cccccCCCceEecCcCCCCCC-cCCHHHHHHHHHHhhcCCCCCC
Q 031839 76 ------MF-HPNIYADGSICLDILQNQWSP-IYDVAAILTSIQSLLCDPNPNS 120 (152)
Q Consensus 76 ------i~-Hpnv~~~G~ic~~~l~~~W~p-~~~i~~il~~l~~~l~~p~~~~ 120 (152)
++ |||||.+|+||++.| .+|++ ..++.++|..|+++|.+|+++.
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 999999999999999 46999 5899999999999999999874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.81 E-value=1.6e-21 Score=135.22 Aligned_cols=95 Identities=22% Similarity=0.492 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCc----------EEEEEEEeCCCCCCCCCeeeEecc
Q 031839 6 RKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGG----------TFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg----------~f~~~i~~p~~YP~~pP~i~f~t~ 75 (152)
..||++||..|.+ +++..+.+...|...+.||.||+|.|+ .|.+++.||.+||.+||+|.|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 5799999999987 567777888899999999999999999 999999999999999999999995
Q ss_pred -cccccccCCCceEecCcC-CCC---CCcCCHHHHH
Q 031839 76 -MFHPNIYADGSICLDILQ-NQW---SPIYDVAAIL 106 (152)
Q Consensus 76 -i~Hpnv~~~G~ic~~~l~-~~W---~p~~~i~~il 106 (152)
.+|||++.+|+||++++. .-| .|.++|...|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 899999999999999872 223 3456777665
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.57 E-value=4.9e-15 Score=103.84 Aligned_cols=80 Identities=24% Similarity=0.493 Sum_probs=70.4
Q ss_pred cCCCcceEEEEEecCCCCCCCCcEEE--EEEEeCCCCCCCCCeeeEecc------cccccccCCCceEecCcCCCCCC-c
Q 031839 29 QDNSIMLWNAVIFGPDDTPWDGGTFK--LTLQFTEDYPNKPPTVRFVSR------MFHPNIYADGSICLDILQNQWSP-I 99 (152)
Q Consensus 29 ~~~n~~~w~~~i~gp~~tpy~gg~f~--~~i~~p~~YP~~pP~i~f~t~------i~Hpnv~~~G~ic~~~l~~~W~p-~ 99 (152)
...+++.|.++|. .+|+|+.|. +.|.||.+||++||.+ |.++ .+|||||.+|+||++.|.+ |++ .
T Consensus 49 ~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~ 122 (146)
T 3obq_A 49 GSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQ 122 (146)
T ss_dssp TTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTT
T ss_pred ChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCC
Confidence 3467899999996 579999998 4999999999999999 6655 5899999999999999955 987 6
Q ss_pred CCHHHHHHHHHHhhc
Q 031839 100 YDVAAILTSIQSLLC 114 (152)
Q Consensus 100 ~~i~~il~~l~~~l~ 114 (152)
.++.+++..++++|.
T Consensus 123 snL~~ll~~l~~~F~ 137 (146)
T 3obq_A 123 SDLLGLIQVMIVVFG 137 (146)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999999999986
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.80 E-value=0.01 Score=39.73 Aligned_cols=67 Identities=12% Similarity=0.208 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEec
Q 031839 6 RKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t 74 (152)
..+...|+..|..-=+..+.+. .+....+.+.|....|..-+.-.+.+.+.+|++||..||.|.+.+
T Consensus 12 ~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 12 GEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4566788888876544445443 222455555554222222234478899999999999999998765
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.30 E-value=0.05 Score=39.08 Aligned_cols=82 Identities=17% Similarity=0.309 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhcCCCCCeE-EeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecccccccccCCC
Q 031839 7 KRLMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADG 85 (152)
Q Consensus 7 ~RL~~E~~~l~~~~~~gi~-~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~Hpnv~~~G 85 (152)
.+|.+|+.++ |.. +.-.++++....+.+.... |....++|.++.+||.++|.+...-|. |
T Consensus 4 ~~li~Ei~~i------GW~~l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------ 64 (186)
T 3zqs_A 4 SSLIEEIGTL------GWDKLVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--P------ 64 (186)
T ss_dssp CSHHHHHHHH------CGGGEEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--C------
T ss_pred HHHHHHHHHh------CCceeeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--C------
Confidence 3678888888 321 2333567888888886544 469999999999999999987655443 1
Q ss_pred ceEecCcCCCCCCcCCHHHHHHHHHHhh
Q 031839 86 SICLDILQNQWSPIYDVAAILTSIQSLL 113 (152)
Q Consensus 86 ~ic~~~l~~~W~p~~~i~~il~~l~~~l 113 (152)
+.-.|.+..++.+++...+..+
T Consensus 65 ------~~~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 65 ------FCASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHHH
T ss_pred ------cccccCCCccHHHHHHHHHHHH
Confidence 1246999989888877665544
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.26 E-value=0.041 Score=36.69 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecC--CCcceEEEEEecCCCCCCC--CcEEEEEEEeCCCCCCCCCeeeEec
Q 031839 7 KRLMRDFKRLQQDPPAGISGAPQD--NSIMLWNAVIFGPDDTPWD--GGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 7 ~RL~~E~~~l~~~~~~gi~~~~~~--~n~~~w~~~i~gp~~tpy~--gg~f~~~i~~p~~YP~~pP~i~f~t 74 (152)
.+...|+..|..-=+..+.+.... .+...+.+.+..+.+..-+ .-.+.+.|.+|++||..+|.|.+.+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 356778888876544455544322 1234444455322221111 2478899999999999999998876
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.67 E-value=0.12 Score=34.78 Aligned_cols=68 Identities=10% Similarity=0.202 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecC------CCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEec
Q 031839 6 RKRLMRDFKRLQQDPPAGISGAPQD------NSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~gi~~~~~~------~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t 74 (152)
..+-..|+..|..--+..+.+.... +....+.+.|....+ .-..-.+.+.+.+|++||..+|.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 3455678888876444444322111 124566777753322 1123478899999999999999998765
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.05 E-value=0.26 Score=34.07 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=21.5
Q ss_pred EEEEEEEeCCCCCCCCCeeeEecc
Q 031839 52 TFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 52 ~f~~~i~~p~~YP~~pP~i~f~t~ 75 (152)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987653
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.57 E-value=0.45 Score=31.81 Aligned_cols=68 Identities=15% Similarity=0.201 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCC-----CcceEEEEEecCCC-C-CCCCcEEEEEEEeCCCCCCCCCeeeEec
Q 031839 6 RKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDD-T-PWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 6 ~~RL~~E~~~l~~~~~~gi~~~~~~~-----n~~~w~~~i~gp~~-t-py~gg~f~~~i~~p~~YP~~pP~i~f~t 74 (152)
..+...|+..|..-=+..+.+..... ......+.+. +.+ . .-..-.+.+.|.||++||..+|.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 45567788888764444454332111 1344555553 222 0 0012468899999999999999998753
No 62
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.03 E-value=0.21 Score=33.20 Aligned_cols=66 Identities=9% Similarity=0.025 Sum_probs=39.1
Q ss_pred HHHHHHHHHhcCCCC--CeEEee-cCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEec
Q 031839 8 RLMRDFKRLQQDPPA--GISGAP-QDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 8 RL~~E~~~l~~~~~~--gi~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t 74 (152)
+...|+..|..-=+. .+.+.- ...+...+.+.+..... .=..-.+.+.+.+|++||..+|.|.+.+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGF-MDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTT-TTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCC-CCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 456677777653221 233221 11234567777743221 1112478999999999999999997653
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.03 E-value=0.18 Score=34.61 Aligned_cols=25 Identities=24% Similarity=0.357 Sum_probs=21.7
Q ss_pred cEEEEEEEeCCCCCCCCCeeeEecc
Q 031839 51 GTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 51 g~f~~~i~~p~~YP~~pP~i~f~t~ 75 (152)
-.+.+.+.+|.+||..||.|...+.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987764
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=85.89 E-value=0.72 Score=21.36 Aligned_cols=21 Identities=29% Similarity=0.675 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCe
Q 031839 4 PARKRLMRDFKRLQQDPPAGI 24 (152)
Q Consensus 4 ~a~~RL~~E~~~l~~~~~~gi 24 (152)
+.+.||+-|+..++.+||.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 467899999999999999874
No 65
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=73.27 E-value=0.7 Score=30.16 Aligned_cols=32 Identities=9% Similarity=-0.027 Sum_probs=0.0
Q ss_pred cCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHH
Q 031839 114 CDPNPNSPANSEAARMFSENKREYNRRVREIV 145 (152)
Q Consensus 114 ~~p~~~~p~n~ea~~~~~~~~~~f~~~~~~~~ 145 (152)
.-.....|.+.+.|++|+++++.|.+.||.|.
T Consensus 19 ~~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT 50 (108)
T 2cwb_A 19 KGETTTEAVDAATAEKVFKQYANDNGVDGEWT 50 (108)
T ss_dssp --------------------------------
T ss_pred cCcccCCchhHHHHHHHHhchhcccccccccc
Confidence 34455678999999999999999999999888
No 66
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=68.47 E-value=7.4 Score=32.02 Aligned_cols=28 Identities=21% Similarity=0.305 Sum_probs=24.7
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 124 SEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 124 ~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
.|+..+..+|++.|.++|+++.+++-++
T Consensus 278 ee~~~l~~~dp~~~~~~~~~Sm~rhv~a 305 (552)
T 2fkn_A 278 DEADRLRQDTPELYVRLAKQSMKKHVEA 305 (552)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 4688888999999999999999988765
No 67
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=67.79 E-value=7.8 Score=31.88 Aligned_cols=28 Identities=21% Similarity=0.364 Sum_probs=24.7
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 124 SEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 124 ~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
.|+..+..+|++.|.++|+++.+++.++
T Consensus 277 ee~~~l~~~dp~~~~~~~~~Sm~rhv~a 304 (551)
T 1x87_A 277 DEAAELRARDPKQYIARAKQSIAAHVRA 304 (551)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 4788888999999999999999988765
No 68
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=67.57 E-value=8 Score=31.86 Aligned_cols=28 Identities=4% Similarity=-0.047 Sum_probs=24.7
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031839 124 SEAARMFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 124 ~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
.|+..+..+|++.|.++|+++.+++-++
T Consensus 282 ee~~~l~~~dp~~~~~~~~~Sm~rhv~A 309 (557)
T 1uwk_A 282 EQYRDRAQTEPAAVVKAAKQSMAVHVQA 309 (557)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 4688888999999999999999988765
No 69
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=35.74 E-value=12 Score=17.16 Aligned_cols=17 Identities=35% Similarity=0.647 Sum_probs=9.9
Q ss_pred CCCCCeeeEeccccccc
Q 031839 64 PNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 64 P~~pP~i~f~t~i~Hpn 80 (152)
|..-|.-.|....|||-
T Consensus 4 pmtlpenyfserpyhpp 20 (26)
T 2jrw_A 4 PMTLPENYFSERPYHPP 20 (26)
T ss_dssp CCCCSSSSCCSSSCCSC
T ss_pred ccccchhhcccCCCCCC
Confidence 34445555666677763
No 70
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=35.60 E-value=1.1e+02 Score=21.41 Aligned_cols=46 Identities=22% Similarity=0.440 Sum_probs=33.1
Q ss_pred CCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccccc
Q 031839 31 NSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 31 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~t~i~H 78 (152)
+.-..|.+.+.|+.|.-...-+=++...+.+.||. |...+..+.|.
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPFe 75 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPFE 75 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSEE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCCE
Confidence 45678999999987754444455788889999974 66666666543
No 71
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=32.44 E-value=48 Score=18.96 Aligned_cols=20 Identities=10% Similarity=0.273 Sum_probs=18.1
Q ss_pred CCHHHHHHHHHCHHHHHHHH
Q 031839 122 ANSEAARMFSENKREYNRRV 141 (152)
Q Consensus 122 ~n~ea~~~~~~~~~~f~~~~ 141 (152)
.|++...+..+|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 68999999999999999875
No 72
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=31.74 E-value=86 Score=20.51 Aligned_cols=29 Identities=7% Similarity=0.062 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEeecCCCc
Q 031839 5 ARKRLMRDFKRLQQDPPAGISGAPQDNSI 33 (152)
Q Consensus 5 a~~RL~~E~~~l~~~~~~gi~~~~~~~n~ 33 (152)
-.+.|..||.++.+.++..++++..+...
T Consensus 32 lS~~Lid~La~i~~~~~e~fTle~i~s~~ 60 (122)
T 1u9d_A 32 LVPTLLNELSSLLSTARNAFTFELINTQY 60 (122)
T ss_dssp HHHHHHHHHHHHHTCCGGGCEEEECCCCC
T ss_pred HhHHHHHHHHHHHCCCcccEEEEEeeeEE
Confidence 45778899999999999999988765443
No 73
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=30.39 E-value=30 Score=23.36 Aligned_cols=68 Identities=18% Similarity=0.276 Sum_probs=41.3
Q ss_pred HHHHHHhcCCCCCeEEeecCCCcceEEEEEecCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEe---cccccccccCCCce
Q 031839 11 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV---SRMFHPNIYADGSI 87 (152)
Q Consensus 11 ~E~~~l~~~~~~gi~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~i~f~---t~i~Hpnv~~~G~i 87 (152)
+++++....-+.|+.+....++ -..++...+ .| ..+ -..||.|.+. +.--|++|..+|.+
T Consensus 5 ~~fr~a~~~~p~~V~vVTt~~~-g~~~g~t~s---------~~-~sv------s~~PP~v~v~i~~~~~t~~~i~~~~~F 67 (157)
T 3pft_A 5 TSLREAFGHFPSGVIAIAAEVD-GTRVGLAAS---------TF-VPV------SLEPPLVAFAVQNSSTTWPKLKDLPSL 67 (157)
T ss_dssp HHHHHHHHTSCBCCEEEEEEET-TEEEEEEES---------CC-EEE------ETTTTEEEEEEETTCSSHHHHTTSSCE
T ss_pred HHHHHHHHhCCCceEEEEEeeC-CEEEEEEee---------eE-eEE------ECCCcEEEEEECCCCchHHHHHhCCEE
Confidence 4677777777778876653321 122222211 00 111 1368988876 34678999999999
Q ss_pred EecCcCCC
Q 031839 88 CLDILQNQ 95 (152)
Q Consensus 88 c~~~l~~~ 95 (152)
|++++.++
T Consensus 68 ~Vnvl~~~ 75 (157)
T 3pft_A 68 GISVLGEA 75 (157)
T ss_dssp EEEECBTT
T ss_pred EEEECCHH
Confidence 99998644
No 74
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=30.13 E-value=46 Score=23.94 Aligned_cols=25 Identities=12% Similarity=0.349 Sum_probs=21.5
Q ss_pred CCcEEEEEEEeCCCCCC-----CCCeeeEe
Q 031839 49 DGGTFKLTLQFTEDYPN-----KPPTVRFV 73 (152)
Q Consensus 49 ~gg~f~~~i~~p~~YP~-----~pP~i~f~ 73 (152)
+.|.|.|.-.+|--||. .||.|+|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 45899999999999998 78888876
No 75
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=30.09 E-value=49 Score=19.67 Aligned_cols=21 Identities=10% Similarity=0.265 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHCHHHHHHHHH
Q 031839 122 ANSEAARMFSENKREYNRRVR 142 (152)
Q Consensus 122 ~n~ea~~~~~~~~~~f~~~~~ 142 (152)
.||+...+..+|.++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 689999999999999998874
No 76
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=25.33 E-value=37 Score=20.94 Aligned_cols=13 Identities=54% Similarity=0.777 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHH
Q 031839 4 PARKRLMRDFKRL 16 (152)
Q Consensus 4 ~a~~RL~~E~~~l 16 (152)
..+||+|+||+=|
T Consensus 62 sQLKRvQRdlrGL 74 (87)
T 2rf4_B 62 SQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcCC
Confidence 4579999998755
No 77
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=23.01 E-value=1.8e+02 Score=19.55 Aligned_cols=44 Identities=14% Similarity=0.304 Sum_probs=32.1
Q ss_pred cceEE--EEEecCCCCCCCC-cEEEEEEEeCCCCCCCCCeeeEeccccc
Q 031839 33 IMLWN--AVIFGPDDTPWDG-GTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 33 ~~~w~--~~i~gp~~tpy~g-g~f~~~i~~p~~YP~~pP~i~f~t~i~H 78 (152)
...|. +.+.|+.|..... -+=++...+-+.|+ .|...+..+.|.
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF~ 78 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPFR 78 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTCC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCcE
Confidence 46898 8888998876643 44478888888887 487777776553
No 78
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=22.47 E-value=1.3e+02 Score=18.72 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=19.8
Q ss_pred CCcEEEEEEEeCCCCCCCCCeeeEec
Q 031839 49 DGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 49 ~gg~f~~~i~~p~~YP~~pP~i~f~t 74 (152)
.+..+...|.|+..|+ .+|+|.+.-
T Consensus 27 g~R~~~~~V~F~~~F~-~~P~V~v~l 51 (101)
T 2ccv_A 27 NTRELAKNITFASPYC-RPPVVLLSI 51 (101)
T ss_dssp SCEEEEEEEECSSCCS-SCCEEEEEE
T ss_pred cceEEEEEeEeCcccC-CCCEEEEEe
Confidence 3447788899999998 599998763
No 79
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=21.42 E-value=25 Score=23.45 Aligned_cols=31 Identities=19% Similarity=0.424 Sum_probs=24.9
Q ss_pred CCCCeeeEe---cccccccccCCCceEecCcCCC
Q 031839 65 NKPPTVRFV---SRMFHPNIYADGSICLDILQNQ 95 (152)
Q Consensus 65 ~~pP~i~f~---t~i~Hpnv~~~G~ic~~~l~~~ 95 (152)
..||.|.|. +.--|++|..+|.+|++++.++
T Consensus 40 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 40 LEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 468988876 3466899999999999998654
No 80
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=20.89 E-value=54 Score=15.40 Aligned_cols=14 Identities=36% Similarity=0.731 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHhc
Q 031839 5 ARKRLMRDFKRLQQ 18 (152)
Q Consensus 5 a~~RL~~E~~~l~~ 18 (152)
..|++++||..|..
T Consensus 11 dKR~lLkeyY~L~~ 24 (26)
T 2c5k_P 11 DRRLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhhhc
Confidence 45778899988865
Done!