Query 031846
Match_columns 152
No_of_seqs 146 out of 254
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 09:33:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031846.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031846hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zu2_A Mitochondrial import re 99.9 7.4E-27 2.5E-31 182.3 9.0 89 1-89 61-149 (158)
2 4gco_A Protein STI-1; structur 99.5 2.5E-13 8.4E-18 96.8 9.5 75 1-86 28-123 (126)
3 4ga2_A E3 SUMO-protein ligase 99.4 6.6E-13 2.3E-17 96.4 9.9 78 1-89 46-145 (150)
4 4gco_A Protein STI-1; structur 99.4 1.1E-12 3.7E-17 93.4 8.7 63 1-74 62-124 (126)
5 1zu2_A Mitochondrial import re 99.3 1.6E-12 5.5E-17 101.2 6.8 81 1-82 17-122 (158)
6 4gcn_A Protein STI-1; structur 99.3 6.8E-13 2.3E-17 94.1 3.9 53 1-64 23-75 (127)
7 3upv_A Heat shock protein STI1 99.3 8.1E-12 2.8E-16 85.8 9.2 54 1-65 19-72 (126)
8 1hxi_A PEX5, peroxisome target 99.3 6E-12 2.1E-16 88.8 7.9 55 1-66 32-86 (121)
9 3vtx_A MAMA; tetratricopeptide 99.3 1E-12 3.6E-17 94.8 3.8 72 2-84 89-174 (184)
10 3gyz_A Chaperone protein IPGC; 99.3 4.7E-12 1.6E-16 94.5 7.3 54 1-65 51-104 (151)
11 2xcb_A PCRH, regulatory protei 99.3 2.6E-11 8.9E-16 86.0 9.9 54 1-65 33-86 (142)
12 2kc7_A BFR218_protein; tetratr 99.3 2.5E-11 8.4E-16 80.1 8.9 70 1-81 15-91 (99)
13 2vgx_A Chaperone SYCD; alterna 99.3 2.4E-11 8.2E-16 88.4 9.7 71 1-82 36-127 (148)
14 4ga2_A E3 SUMO-protein ligase 99.3 3.3E-12 1.1E-16 92.7 5.0 80 2-92 13-113 (150)
15 3gyz_A Chaperone protein IPGC; 99.3 1.5E-11 5.2E-16 91.8 8.3 62 1-73 85-146 (151)
16 3sz7_A HSC70 cochaperone (SGT) 99.2 3.8E-11 1.3E-15 86.3 9.6 69 1-80 26-115 (164)
17 3rkv_A Putative peptidylprolyl 99.2 4E-11 1.4E-15 86.1 8.1 63 1-74 78-141 (162)
18 3k9i_A BH0479 protein; putativ 99.2 4.5E-11 1.5E-15 82.2 7.7 53 2-65 6-61 (117)
19 4gyw_A UDP-N-acetylglucosamine 99.2 4.5E-11 1.5E-15 109.8 9.6 81 2-93 59-160 (723)
20 2l6j_A TPR repeat-containing p 99.2 1.2E-10 4.1E-15 76.8 8.7 53 1-64 19-71 (111)
21 2pl2_A Hypothetical conserved 99.2 9.6E-11 3.3E-15 89.0 9.0 90 2-92 55-165 (217)
22 3q49_B STIP1 homology and U bo 99.2 2.2E-10 7.6E-15 78.3 9.9 54 1-65 24-77 (137)
23 4gyw_A UDP-N-acetylglucosamine 99.2 7E-11 2.4E-15 108.4 9.5 76 2-88 25-121 (723)
24 3urz_A Uncharacterized protein 99.2 4.2E-11 1.5E-15 90.4 6.7 78 1-89 19-133 (208)
25 2hr2_A Hypothetical protein; a 99.2 4.5E-11 1.5E-15 93.0 6.8 72 1-83 26-134 (159)
26 2pl2_A Hypothetical conserved 99.2 1.7E-10 5.7E-15 87.6 9.6 81 1-92 20-132 (217)
27 3k9i_A BH0479 protein; putativ 99.2 1.7E-11 6E-16 84.3 3.7 67 1-78 42-111 (117)
28 1na3_A Designed protein CTPR2; 99.2 2.3E-10 7.8E-15 73.1 8.8 60 1-71 24-83 (91)
29 3vtx_A MAMA; tetratricopeptide 99.2 2.2E-10 7.6E-15 82.5 9.6 80 1-91 20-120 (184)
30 3upv_A Heat shock protein STI1 99.1 1.2E-10 4.1E-15 79.9 7.7 64 1-75 53-122 (126)
31 3sz7_A HSC70 cochaperone (SGT) 99.1 5.9E-11 2E-15 85.3 6.4 64 1-75 60-125 (164)
32 2vgx_A Chaperone SYCD; alterna 99.1 6.3E-11 2.2E-15 86.1 6.6 56 1-67 70-125 (148)
33 2lni_A Stress-induced-phosphop 99.1 2.1E-10 7.3E-15 76.8 8.6 53 2-65 32-84 (133)
34 2xcb_A PCRH, regulatory protei 99.1 6.3E-11 2.2E-15 84.0 6.0 61 1-72 67-127 (142)
35 3rkv_A Putative peptidylprolyl 99.1 1.5E-10 5.1E-15 83.1 6.9 74 1-85 26-139 (162)
36 1elw_A TPR1-domain of HOP; HOP 99.1 5E-10 1.7E-14 73.0 8.5 54 1-65 19-72 (118)
37 3urz_A Uncharacterized protein 99.1 3.2E-10 1.1E-14 85.6 8.6 60 1-71 69-128 (208)
38 2dba_A Smooth muscle cell asso 99.1 6.2E-10 2.1E-14 76.0 9.2 54 1-65 43-99 (148)
39 3ma5_A Tetratricopeptide repea 99.1 8.5E-11 2.9E-15 79.8 4.9 53 1-64 22-74 (100)
40 2kat_A Uncharacterized protein 99.1 2.3E-10 7.8E-15 77.8 6.9 52 3-65 2-53 (115)
41 2vyi_A SGTA protein; chaperone 99.1 1.1E-09 3.7E-14 72.3 9.3 53 2-65 28-80 (131)
42 2dba_A Smooth muscle cell asso 99.1 8.2E-10 2.8E-14 75.4 8.8 64 1-75 80-143 (148)
43 4i17_A Hypothetical protein; T 99.1 9.6E-10 3.3E-14 81.9 9.5 67 1-78 22-110 (228)
44 2h6f_A Protein farnesyltransfe 99.0 5.2E-10 1.8E-14 94.7 8.9 53 2-65 148-200 (382)
45 1hxi_A PEX5, peroxisome target 99.0 3.2E-10 1.1E-14 79.8 6.1 54 1-65 66-119 (121)
46 2h6f_A Protein farnesyltransfe 99.0 4E-10 1.4E-14 95.4 7.7 74 2-86 113-208 (382)
47 2hr2_A Hypothetical protein; a 99.0 1.3E-10 4.4E-15 90.4 4.2 54 1-65 72-136 (159)
48 2kck_A TPR repeat; tetratricop 99.0 1.8E-09 6.3E-14 69.9 9.0 60 1-71 21-82 (112)
49 1elw_A TPR1-domain of HOP; HOP 99.0 1.8E-09 6E-14 70.4 8.7 63 1-74 53-115 (118)
50 4gcn_A Protein STI-1; structur 99.0 4.5E-10 1.5E-14 79.5 6.2 61 1-72 57-124 (127)
51 1a17_A Serine/threonine protei 99.0 2.3E-09 8E-14 74.5 9.5 52 2-64 29-80 (166)
52 2xev_A YBGF; tetratricopeptide 99.0 1.9E-09 6.6E-14 72.9 8.6 53 1-64 17-72 (129)
53 2xev_A YBGF; tetratricopeptide 99.0 2.6E-09 8.9E-14 72.2 9.3 63 1-74 54-119 (129)
54 4i17_A Hypothetical protein; T 99.0 5.1E-10 1.8E-14 83.4 6.2 54 1-65 57-110 (228)
55 1a17_A Serine/threonine protei 99.0 1.4E-09 4.9E-14 75.6 8.0 55 1-66 62-116 (166)
56 1na0_A Designed protein CTPR3; 99.0 3.4E-09 1.2E-13 69.4 9.3 54 1-65 24-77 (125)
57 1p5q_A FKBP52, FK506-binding p 99.0 1.5E-09 5E-14 88.7 8.7 75 1-86 162-272 (336)
58 2fbn_A 70 kDa peptidylprolyl i 99.0 3.2E-09 1.1E-13 78.3 9.6 77 1-88 53-166 (198)
59 2fbn_A 70 kDa peptidylprolyl i 99.0 2E-09 7E-14 79.4 8.5 63 1-74 103-165 (198)
60 2lni_A Stress-induced-phosphop 99.0 2.4E-09 8.1E-14 71.6 7.6 60 1-71 65-124 (133)
61 2vyi_A SGTA protein; chaperone 99.0 4.2E-09 1.5E-13 69.5 8.7 60 1-71 61-120 (131)
62 1pc2_A Mitochondria fission pr 98.9 8.5E-10 2.9E-14 85.6 5.8 67 1-78 50-118 (152)
63 1p5q_A FKBP52, FK506-binding p 98.9 3E-09 1E-13 86.9 8.7 60 1-71 211-270 (336)
64 1hh8_A P67PHOX, NCF-2, neutrop 98.9 1.4E-09 4.7E-14 79.6 6.0 54 1-65 52-105 (213)
65 2r5s_A Uncharacterized protein 98.9 5.2E-10 1.8E-14 81.7 3.7 80 1-92 21-122 (176)
66 3q49_B STIP1 homology and U bo 98.9 1.6E-09 5.5E-14 74.0 5.9 52 1-63 58-109 (137)
67 3qou_A Protein YBBN; thioredox 98.9 1.7E-09 6E-14 85.9 6.6 80 2-92 133-233 (287)
68 3bee_A Putative YFRE protein; 98.9 2.2E-09 7.4E-14 74.9 6.2 55 1-66 24-78 (93)
69 2pzi_A Probable serine/threoni 98.9 2.3E-09 8E-14 95.8 8.0 81 1-92 448-548 (681)
70 1ihg_A Cyclophilin 40; ppiase 98.9 4.6E-09 1.6E-13 87.9 9.1 71 1-82 288-358 (370)
71 3uq3_A Heat shock protein STI1 98.9 7.9E-09 2.7E-13 75.9 9.2 53 2-65 155-207 (258)
72 1na0_A Designed protein CTPR3; 98.9 1.2E-08 4.3E-13 66.6 8.8 61 1-72 58-118 (125)
73 2e2e_A Formate-dependent nitri 98.9 5E-09 1.7E-13 75.4 7.4 53 2-65 60-115 (177)
74 2kat_A Uncharacterized protein 98.9 2E-09 6.7E-14 73.1 5.0 53 1-64 34-86 (115)
75 2c2l_A CHIP, carboxy terminus 98.9 5.2E-09 1.8E-13 83.1 8.1 54 1-65 19-72 (281)
76 1wao_1 Serine/threonine protei 98.9 6.6E-09 2.3E-13 89.5 9.2 75 1-86 21-116 (477)
77 1elr_A TPR2A-domain of HOP; HO 98.9 6.3E-09 2.2E-13 68.9 6.9 53 1-64 19-71 (131)
78 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 4.5E-09 1.5E-13 89.6 7.8 61 1-72 332-392 (457)
79 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 4.7E-09 1.6E-13 89.5 7.7 54 1-65 283-351 (457)
80 1xnf_A Lipoprotein NLPI; TPR, 98.9 1.2E-08 4.1E-13 76.1 8.9 52 2-64 59-110 (275)
81 4eqf_A PEX5-related protein; a 98.9 7.7E-09 2.6E-13 81.5 8.3 75 1-86 80-168 (365)
82 2vsy_A XCC0866; transferase, g 98.8 1.2E-08 4E-13 87.4 9.7 80 1-91 38-138 (568)
83 4eqf_A PEX5-related protein; a 98.8 1.4E-08 4.7E-13 80.1 8.9 76 2-88 193-291 (365)
84 1w3b_A UDP-N-acetylglucosamine 98.8 1.9E-08 6.6E-13 80.0 9.9 77 2-89 49-146 (388)
85 2if4_A ATFKBP42; FKBP-like, al 98.8 2.7E-09 9.1E-14 87.5 4.9 63 1-74 245-307 (338)
86 1fch_A Peroxisomal targeting s 98.8 2.2E-08 7.5E-13 78.0 9.8 53 2-65 233-285 (368)
87 3ieg_A DNAJ homolog subfamily 98.8 1.6E-08 5.5E-13 77.2 8.7 59 2-71 288-346 (359)
88 1w3b_A UDP-N-acetylglucosamine 98.8 2.2E-08 7.4E-13 79.8 9.5 77 2-89 151-248 (388)
89 4abn_A Tetratricopeptide repea 98.8 1E-08 3.5E-13 87.4 7.8 82 2-86 195-300 (474)
90 4g1t_A Interferon-induced prot 98.8 5.2E-09 1.8E-13 85.0 5.6 55 2-64 154-208 (472)
91 3as5_A MAMA; tetratricopeptide 98.8 4.3E-08 1.5E-12 68.0 9.4 53 2-65 58-110 (186)
92 2fo7_A Synthetic consensus TPR 98.8 6.2E-08 2.1E-12 63.5 9.7 54 1-65 16-69 (136)
93 3mkr_A Coatomer subunit epsilo 98.8 2.7E-08 9.4E-13 79.6 9.3 54 2-66 182-235 (291)
94 3u4t_A TPR repeat-containing p 98.8 1.3E-08 4.5E-13 76.3 7.0 78 1-89 89-187 (272)
95 2e2e_A Formate-dependent nitri 98.8 2.1E-08 7.2E-13 72.1 7.7 59 3-72 98-156 (177)
96 2q7f_A YRRB protein; TPR, prot 98.8 4.8E-08 1.6E-12 71.5 9.3 53 2-65 73-125 (243)
97 2vsy_A XCC0866; transferase, g 98.7 1.3E-08 4.4E-13 87.1 7.0 80 2-92 5-105 (568)
98 4g1t_A Interferon-induced prot 98.7 3.5E-08 1.2E-12 80.1 9.1 78 1-87 109-218 (472)
99 3as5_A MAMA; tetratricopeptide 98.7 3.1E-08 1.1E-12 68.8 7.6 79 1-90 23-122 (186)
100 1elr_A TPR2A-domain of HOP; HO 98.7 2.1E-08 7.3E-13 66.3 6.4 59 1-71 53-118 (131)
101 3hym_B Cell division cycle pro 98.7 3.7E-08 1.3E-12 74.9 8.6 52 2-64 107-158 (330)
102 1ihg_A Cyclophilin 40; ppiase 98.7 1.5E-08 5.1E-13 84.8 6.8 76 1-87 238-350 (370)
103 2kck_A TPR repeat; tetratricop 98.7 2E-08 7E-13 64.9 6.0 53 1-64 55-110 (112)
104 1fch_A Peroxisomal targeting s 98.7 4.7E-08 1.6E-12 76.1 9.1 79 2-91 197-298 (368)
105 1xnf_A Lipoprotein NLPI; TPR, 98.7 5.2E-08 1.8E-12 72.6 8.7 54 1-65 92-145 (275)
106 3u4t_A TPR repeat-containing p 98.7 4.5E-08 1.5E-12 73.3 8.3 80 1-92 18-122 (272)
107 3qky_A Outer membrane assembly 98.7 3.1E-08 1.1E-12 75.5 7.4 54 1-65 30-86 (261)
108 2yhc_A BAMD, UPF0169 lipoprote 98.7 2.3E-08 7.9E-13 75.7 6.6 54 1-65 19-75 (225)
109 3uq3_A Heat shock protein STI1 98.7 4.1E-08 1.4E-12 72.0 7.5 62 1-73 188-255 (258)
110 2c2l_A CHIP, carboxy terminus 98.7 9.4E-09 3.2E-13 81.6 4.4 53 1-64 53-105 (281)
111 1hh8_A P67PHOX, NCF-2, neutrop 98.7 5.9E-08 2E-12 70.8 8.3 65 1-76 86-168 (213)
112 3cv0_A Peroxisome targeting si 98.7 8.8E-08 3E-12 72.7 9.3 53 2-65 188-240 (327)
113 2if4_A ATFKBP42; FKBP-like, al 98.7 1.6E-08 5.5E-13 82.8 5.4 72 1-83 194-296 (338)
114 2q7f_A YRRB protein; TPR, prot 98.7 2.9E-08 9.8E-13 72.7 6.2 54 1-65 140-193 (243)
115 3ieg_A DNAJ homolog subfamily 98.7 4.1E-08 1.4E-12 75.0 7.2 54 1-65 18-71 (359)
116 3hym_B Cell division cycle pro 98.7 1.3E-07 4.4E-12 71.8 9.9 54 1-65 140-193 (330)
117 2r5s_A Uncharacterized protein 98.7 5.3E-08 1.8E-12 70.9 7.3 50 4-64 92-141 (176)
118 2ond_A Cleavage stimulation fa 98.7 9.6E-08 3.3E-12 75.5 9.3 80 2-92 115-217 (308)
119 2y4t_A DNAJ homolog subfamily 98.7 1E-07 3.6E-12 76.4 9.3 53 2-65 76-128 (450)
120 3cv0_A Peroxisome targeting si 98.6 1.5E-07 5E-12 71.4 9.4 79 2-91 154-253 (327)
121 2v5f_A Prolyl 4-hydroxylase su 98.6 1.1E-07 3.7E-12 65.9 7.9 65 1-76 20-91 (104)
122 2fo7_A Synthetic consensus TPR 98.6 9.3E-08 3.2E-12 62.6 7.2 55 1-66 50-104 (136)
123 1wao_1 Serine/threonine protei 98.6 5.4E-08 1.9E-12 83.8 7.7 57 1-68 55-111 (477)
124 3ma5_A Tetratricopeptide repea 98.6 4.6E-08 1.6E-12 66.2 5.6 40 15-65 2-41 (100)
125 3qky_A Outer membrane assembly 98.6 6.8E-08 2.3E-12 73.7 7.2 74 1-75 163-239 (261)
126 3mkr_A Coatomer subunit epsilo 98.6 1E-07 3.5E-12 76.3 8.4 59 1-70 215-274 (291)
127 2y4t_A DNAJ homolog subfamily 98.6 1.1E-07 3.9E-12 76.2 8.6 55 3-68 312-366 (450)
128 4abn_A Tetratricopeptide repea 98.6 7.7E-08 2.6E-12 82.0 8.0 54 2-66 237-293 (474)
129 2ho1_A Type 4 fimbrial biogene 98.6 1.9E-07 6.5E-12 69.3 9.1 53 2-65 157-209 (252)
130 2ho1_A Type 4 fimbrial biogene 98.6 1.7E-07 5.7E-12 69.6 8.7 52 2-64 87-140 (252)
131 2pzi_A Probable serine/threoni 98.6 9.3E-08 3.2E-12 85.5 8.5 80 2-92 407-515 (681)
132 2vq2_A PILW, putative fimbrial 98.6 1.8E-07 6E-12 67.3 8.3 55 1-66 23-77 (225)
133 2vq2_A PILW, putative fimbrial 98.6 3E-07 1E-11 66.0 8.9 52 2-64 58-112 (225)
134 3qou_A Protein YBBN; thioredox 98.6 1E-07 3.5E-12 75.6 7.1 57 3-70 202-260 (287)
135 3fp2_A TPR repeat-containing p 98.6 2.6E-07 8.8E-12 75.6 9.3 79 2-91 292-391 (537)
136 3fp2_A TPR repeat-containing p 98.6 8.7E-08 3E-12 78.4 6.2 54 2-66 41-94 (537)
137 1qqe_A Vesicular transport pro 98.6 7.4E-08 2.5E-12 76.0 5.7 73 1-84 133-232 (292)
138 2xpi_A Anaphase-promoting comp 98.5 2.1E-07 7.3E-12 77.5 8.5 61 1-72 531-591 (597)
139 1qqe_A Vesicular transport pro 98.5 1.6E-07 5.6E-12 74.0 7.0 54 1-65 173-233 (292)
140 2ond_A Cleavage stimulation fa 98.5 2.7E-07 9.3E-12 72.9 8.1 53 2-65 80-133 (308)
141 2gw1_A Mitochondrial precursor 98.5 3.9E-07 1.3E-11 73.7 7.5 53 1-65 21-73 (514)
142 2gw1_A Mitochondrial precursor 98.5 5.5E-07 1.9E-11 72.8 8.4 61 2-73 431-491 (514)
143 2xpi_A Anaphase-promoting comp 98.4 8.2E-07 2.8E-11 74.0 9.4 52 2-64 389-440 (597)
144 2yhc_A BAMD, UPF0169 lipoprote 98.4 7.3E-07 2.5E-11 67.4 7.2 67 1-67 56-132 (225)
145 2qfc_A PLCR protein; TPR, HTH, 98.3 2.3E-06 7.8E-11 67.0 8.7 70 1-81 130-226 (293)
146 1na3_A Designed protein CTPR2; 98.3 1.5E-06 5.2E-11 55.0 5.6 40 15-65 3-43 (91)
147 3edt_B KLC 2, kinesin light ch 98.3 7.6E-07 2.6E-11 65.6 4.7 72 1-83 100-201 (283)
148 3u3w_A Transcriptional activat 98.2 4.9E-06 1.7E-10 65.0 8.1 48 1-59 130-183 (293)
149 3edt_B KLC 2, kinesin light ch 98.2 1.5E-06 5E-11 64.1 4.6 49 1-60 58-114 (283)
150 4a1s_A PINS, partner of inscut 98.2 2.8E-06 9.7E-11 67.4 6.2 49 1-60 63-115 (411)
151 3ro2_A PINS homolog, G-protein 98.2 3.5E-06 1.2E-10 63.0 6.2 49 1-60 20-72 (338)
152 2l6j_A TPR repeat-containing p 98.1 2.6E-06 8.8E-11 55.6 4.5 36 19-65 3-38 (111)
153 3ro3_A PINS homolog, G-protein 98.1 5.5E-07 1.9E-11 60.7 1.2 52 1-63 24-81 (164)
154 3ulq_A Response regulator aspa 98.1 3.1E-06 1.1E-10 67.9 5.7 70 1-81 199-294 (383)
155 1nzn_A CGI-135 protein, fissio 98.1 5E-06 1.7E-10 62.7 6.3 64 2-76 54-119 (126)
156 3sf4_A G-protein-signaling mod 98.1 4.7E-06 1.6E-10 65.0 6.4 50 1-61 24-77 (406)
157 3u3w_A Transcriptional activat 98.1 8.9E-07 3E-11 69.3 1.8 75 1-86 170-272 (293)
158 1dce_A Protein (RAB geranylger 98.1 5.4E-06 1.8E-10 73.7 7.0 80 2-82 45-140 (567)
159 2qfc_A PLCR protein; TPR, HTH, 98.1 1.9E-06 6.7E-11 67.3 3.7 52 1-63 170-228 (293)
160 1dce_A Protein (RAB geranylger 98.1 9.5E-06 3.2E-10 72.1 8.5 73 2-83 89-176 (567)
161 2ooe_A Cleavage stimulation fa 98.1 1.6E-05 5.6E-10 67.1 9.6 79 2-91 337-438 (530)
162 1ouv_A Conserved hypothetical 98.1 3.5E-06 1.2E-10 64.2 4.9 76 1-89 165-260 (273)
163 2ifu_A Gamma-SNAP; membrane fu 98.1 1.3E-06 4.3E-11 69.4 2.2 52 2-64 131-188 (307)
164 4f3v_A ESX-1 secretion system 98.0 1E-05 3.5E-10 67.6 7.6 58 2-71 187-247 (282)
165 3nf1_A KLC 1, kinesin light ch 98.0 1.6E-06 5.5E-11 65.2 2.3 52 1-63 168-227 (311)
166 3ulq_A Response regulator aspa 98.0 2E-06 6.7E-11 69.1 2.9 53 1-64 118-176 (383)
167 3ro3_A PINS homolog, G-protein 98.0 1.6E-06 5.4E-11 58.4 1.4 51 1-62 64-120 (164)
168 3u64_A Protein TP_0956; tetrat 98.0 8.8E-06 3E-10 69.4 6.2 57 2-64 179-237 (301)
169 3ly7_A Transcriptional activat 98.0 1.6E-05 5.4E-10 69.2 7.4 57 1-69 292-348 (372)
170 3gw4_A Uncharacterized protein 97.9 1.5E-05 5.1E-10 56.9 5.9 49 1-60 41-95 (203)
171 2ooe_A Cleavage stimulation fa 97.9 2.1E-05 7.2E-10 66.4 7.4 52 3-65 303-355 (530)
172 3sf4_A G-protein-signaling mod 97.9 7.2E-06 2.5E-10 63.9 3.9 52 2-64 203-260 (406)
173 3rjv_A Putative SEL1 repeat pr 97.9 2.4E-05 8.1E-10 59.1 6.6 52 2-60 105-158 (212)
174 3nf1_A KLC 1, kinesin light ch 97.9 1.8E-05 6.3E-10 59.4 5.9 50 1-61 42-99 (311)
175 1ouv_A Conserved hypothetical 97.9 3.7E-05 1.3E-09 58.4 7.5 47 2-61 22-72 (273)
176 3ro2_A PINS homolog, G-protein 97.9 4.5E-06 1.5E-10 62.4 2.1 51 2-63 239-295 (338)
177 3q15_A PSP28, response regulat 97.9 1.9E-05 6.5E-10 63.5 5.8 52 1-63 237-293 (378)
178 3q15_A PSP28, response regulat 97.8 6.4E-06 2.2E-10 66.3 2.8 52 1-63 116-173 (378)
179 3o48_A Mitochondria fission 1 97.8 3.9E-05 1.3E-09 58.7 7.0 65 2-77 59-124 (134)
180 3gw4_A Uncharacterized protein 97.8 6.9E-06 2.4E-10 58.7 2.3 51 1-62 81-138 (203)
181 2ifu_A Gamma-SNAP; membrane fu 97.8 1.1E-05 3.9E-10 63.9 3.8 53 1-65 170-228 (307)
182 3dra_A Protein farnesyltransfe 97.8 2.4E-05 8.1E-10 65.1 5.8 57 1-65 84-144 (306)
183 1y8m_A FIS1; mitochondria, unk 97.8 7.1E-05 2.4E-09 57.9 8.1 64 2-76 58-122 (144)
184 4a1s_A PINS, partner of inscut 97.8 1.1E-05 3.8E-10 64.0 3.5 50 1-61 101-156 (411)
185 3dra_A Protein farnesyltransfe 97.8 4.1E-05 1.4E-09 63.7 6.8 55 2-65 49-103 (306)
186 3dss_A Geranylgeranyl transfer 97.8 6E-05 2E-09 63.9 7.8 70 2-71 161-236 (331)
187 3qww_A SET and MYND domain-con 97.8 3.7E-05 1.3E-09 66.8 6.4 53 2-65 314-379 (433)
188 2kc7_A BFR218_protein; tetratr 97.8 8.9E-06 3E-10 53.0 1.9 46 1-65 50-95 (99)
189 3dss_A Geranylgeranyl transfer 97.8 5.4E-05 1.9E-09 64.1 7.1 54 2-65 126-179 (331)
190 3rjv_A Putative SEL1 repeat pr 97.7 0.00018 6.1E-09 54.2 8.5 61 2-72 145-207 (212)
191 3qww_A SET and MYND domain-con 97.6 7E-05 2.4E-09 65.0 6.1 62 1-73 355-429 (433)
192 3q7a_A Farnesyltransferase alp 97.6 0.00017 5.8E-09 61.7 7.9 66 2-71 183-251 (349)
193 1klx_A Cysteine rich protein B 97.6 0.0002 6.7E-09 51.3 6.9 49 2-60 41-90 (138)
194 3q7a_A Farnesyltransferase alp 97.6 0.00013 4.3E-09 62.5 6.7 53 3-65 71-123 (349)
195 3n71_A Histone lysine methyltr 97.5 0.00012 4.2E-09 64.4 6.4 54 1-65 324-390 (490)
196 3ly7_A Transcriptional activat 97.5 0.00012 4.2E-09 63.6 6.3 83 2-84 215-343 (372)
197 3qwp_A SET and MYND domain-con 97.5 9.7E-05 3.3E-09 63.7 5.6 54 1-65 302-368 (429)
198 1klx_A Cysteine rich protein B 97.5 0.0007 2.4E-08 48.4 8.5 45 2-61 11-55 (138)
199 3n71_A Histone lysine methyltr 97.4 0.00017 5.9E-09 63.5 6.2 65 1-76 366-443 (490)
200 3qwp_A SET and MYND domain-con 97.4 0.00022 7.6E-09 61.4 6.7 64 1-75 344-420 (429)
201 3bee_A Putative YFRE protein; 97.4 8.8E-05 3E-09 51.3 3.4 43 16-66 2-44 (93)
202 2xm6_A Protein corresponding t 97.4 0.0004 1.4E-08 58.0 7.3 52 2-63 383-435 (490)
203 4f3v_A ESX-1 secretion system 97.3 0.00026 8.7E-09 59.1 5.7 51 2-63 151-205 (282)
204 1hz4_A MALT regulatory protein 97.3 0.00017 6E-09 56.9 4.4 52 1-63 29-85 (373)
205 2xm6_A Protein corresponding t 97.2 0.00094 3.2E-08 55.7 7.3 49 2-60 312-360 (490)
206 4b4t_Q 26S proteasome regulato 97.1 0.00065 2.2E-08 54.3 5.5 52 1-63 19-87 (434)
207 1hz4_A MALT regulatory protein 97.1 0.00055 1.9E-08 54.1 4.9 52 1-63 108-167 (373)
208 3u64_A Protein TP_0956; tetrat 97.1 0.00056 1.9E-08 58.3 5.2 52 2-63 220-272 (301)
209 1pc2_A Mitochondria fission pr 96.9 0.00086 2.9E-08 51.7 4.1 73 2-82 14-102 (152)
210 3e4b_A ALGK; tetratricopeptide 96.8 0.0022 7.4E-08 54.1 6.6 50 2-58 195-244 (452)
211 3e4b_A ALGK; tetratricopeptide 96.6 0.0042 1.4E-07 52.4 6.6 49 2-61 233-281 (452)
212 3mv2_B Coatomer subunit epsilo 96.1 0.0081 2.8E-07 50.6 5.9 58 1-71 226-293 (310)
213 4b4t_Q 26S proteasome regulato 96.0 0.005 1.7E-07 49.1 4.0 51 1-62 150-206 (434)
214 2cpt_A SKD1 protein, vacuolar 95.2 0.078 2.7E-06 39.0 7.4 67 2-87 15-86 (117)
215 1ya0_A SMG-7 transcript varian 95.2 0.058 2E-06 48.1 7.9 61 2-73 168-228 (497)
216 1xi4_A Clathrin heavy chain; a 95.1 0.032 1.1E-06 56.4 6.7 53 1-62 1295-1347(1630)
217 1xi4_A Clathrin heavy chain; a 95.1 0.045 1.5E-06 55.4 7.6 47 2-64 1121-1167(1630)
218 3ffl_A Anaphase-promoting comp 94.9 0.022 7.7E-07 44.7 4.0 49 1-60 35-92 (167)
219 1b89_A Protein (clathrin heavy 94.4 0.14 4.8E-06 45.4 8.4 77 1-82 163-274 (449)
220 1b89_A Protein (clathrin heavy 93.9 0.029 9.8E-07 49.8 2.9 53 1-62 222-274 (449)
221 1zbp_A Hypothetical protein VP 93.7 0.23 7.7E-06 41.7 7.9 59 2-71 13-75 (273)
222 2v5f_A Prolyl 4-hydroxylase su 93.7 0.077 2.6E-06 35.9 4.1 27 1-27 61-87 (104)
223 3mv2_B Coatomer subunit epsilo 93.1 0.21 7.3E-06 41.9 6.8 47 5-62 85-131 (310)
224 1wfd_A Hypothetical protein 15 93.0 0.25 8.7E-06 34.6 6.0 68 1-87 11-82 (93)
225 2uy1_A Cleavage stimulation fa 92.8 0.54 1.9E-05 40.6 9.2 51 4-66 197-247 (493)
226 2ff4_A Probable regulatory pro 92.7 0.65 2.2E-05 39.0 9.3 68 2-73 187-257 (388)
227 4e6h_A MRNA 3'-END-processing 91.9 0.31 1E-05 44.6 6.6 76 2-88 486-585 (679)
228 2dl1_A Spartin; SPG20, MIT, st 89.3 0.49 1.7E-05 35.2 4.6 40 39-78 37-81 (116)
229 4e6h_A MRNA 3'-END-processing 89.2 0.6 2.1E-05 42.7 6.1 53 3-66 49-101 (679)
230 2v6y_A AAA family ATPase, P60 88.9 0.48 1.6E-05 32.5 4.0 45 2-65 8-52 (83)
231 2v6x_A Vacuolar protein sortin 88.5 1.2 4.1E-05 30.2 5.9 45 2-65 10-54 (85)
232 1nzn_A CGI-135 protein, fissio 84.1 0.7 2.4E-05 34.4 3.0 55 2-64 17-72 (126)
233 2w2u_A Hypothetical P60 katani 83.6 1.4 4.7E-05 30.3 4.1 45 2-65 16-60 (83)
234 2zan_A Vacuolar protein sortin 76.6 0.51 1.8E-05 40.4 0.0 65 1-84 7-76 (444)
235 4gns_B Protein CSD3, chitin bi 76.1 3.2 0.00011 38.9 5.2 44 2-56 353-396 (754)
236 3kae_A CDC27, possible protein 74.4 9.6 0.00033 31.1 6.9 51 2-63 78-146 (242)
237 4a5x_A MITD1, MIT domain-conta 74.4 2.4 8.1E-05 29.3 3.0 26 41-66 33-58 (86)
238 4a5x_A MITD1, MIT domain-conta 72.6 8.7 0.0003 26.3 5.5 16 44-59 29-44 (86)
239 3mkq_B Coatomer subunit alpha; 72.4 7 0.00024 30.4 5.6 40 2-57 21-60 (177)
240 1ya0_A SMG-7 transcript varian 71.4 6 0.00021 35.0 5.6 34 21-65 153-186 (497)
241 2crb_A Nuclear receptor bindin 65.4 19 0.00064 26.0 6.1 35 41-76 32-66 (97)
242 2dl1_A Spartin; SPG20, MIT, st 63.7 2.9 9.9E-05 31.0 1.6 38 43-80 15-58 (116)
243 4g26_A Pentatricopeptide repea 62.7 41 0.0014 28.9 9.0 60 2-73 121-184 (501)
244 2w2u_A Hypothetical P60 katani 62.4 4.3 0.00015 27.8 2.2 37 45-82 14-50 (83)
245 4h7y_A Dual specificity protei 61.1 26 0.00091 27.2 6.8 52 2-64 76-127 (161)
246 2v6y_A AAA family ATPase, P60 60.4 4.9 0.00017 27.3 2.2 17 46-62 7-23 (83)
247 3t5x_A PCI domain-containing p 60.4 9 0.00031 29.7 4.0 31 23-64 17-47 (203)
248 1wfd_A Hypothetical protein 15 60.1 4 0.00014 28.3 1.8 39 46-85 11-49 (93)
249 2cpt_A SKD1 protein, vacuolar 59.9 3.2 0.00011 30.2 1.3 17 43-59 30-46 (117)
250 3eab_A Spastin; spastin, MIT, 58.6 5.3 0.00018 28.3 2.2 33 40-72 35-69 (89)
251 2jp3_A FXYD domain-containing 57.1 10 0.00035 25.7 3.3 12 111-122 3-14 (67)
252 4gof_A Small glutamine-rich te 56.4 11 0.00039 24.1 3.3 24 41-64 24-47 (52)
253 3mkq_A Coatomer beta'-subunit; 56.1 12 0.0004 32.2 4.3 29 18-57 679-707 (814)
254 2uy1_A Cleavage stimulation fa 53.1 25 0.00086 30.0 6.0 54 2-66 302-355 (493)
255 4g26_A Pentatricopeptide repea 53.1 67 0.0023 27.6 8.7 62 2-75 86-151 (501)
256 2v6x_A Vacuolar protein sortin 52.4 6.5 0.00022 26.4 1.8 38 46-84 9-46 (85)
257 4gq2_M Nucleoporin NUP120; bet 52.0 14 0.00048 34.7 4.5 38 10-58 830-867 (950)
258 4h7y_A Dual specificity protei 51.8 29 0.001 27.0 5.6 45 14-63 7-51 (161)
259 1y8m_A FIS1; mitochondria, unk 50.9 78 0.0027 23.9 8.9 82 6-96 26-132 (144)
260 3eab_A Spastin; spastin, MIT, 49.9 25 0.00085 24.8 4.5 37 43-79 9-54 (89)
261 4gns_B Protein CSD3, chitin bi 49.7 22 0.00076 33.2 5.4 43 23-76 616-658 (754)
262 2ymb_A MITD1, MIT domain-conta 47.2 4 0.00014 33.8 0.0 43 42-84 41-87 (257)
263 2lxb_A Small glutamine-rich te 47.1 20 0.00068 24.5 3.5 25 41-65 29-53 (74)
264 4fhn_B Nucleoporin NUP120; pro 46.6 16 0.00055 34.8 4.0 35 12-57 834-868 (1139)
265 2zxe_G FXYD10, phospholemman-l 45.7 12 0.00041 25.8 2.2 10 113-122 7-16 (74)
266 2crb_A Nuclear receptor bindin 45.2 16 0.00056 26.3 3.0 25 44-74 28-52 (97)
267 3ax2_A Mitochondrial import re 44.2 51 0.0017 22.2 5.2 30 25-65 22-51 (73)
268 2ls4_A High affinity copper up 49.1 5.1 0.00017 22.4 0.0 15 123-137 2-16 (26)
269 4b4t_S RPN3, 26S proteasome re 43.0 28 0.00095 31.5 4.8 51 2-65 247-304 (523)
270 4asv_A Small glutamine-rich te 39.9 22 0.00074 25.4 2.9 26 41-66 41-66 (92)
271 2ff4_A Probable regulatory pro 39.9 63 0.0022 26.8 6.3 23 43-65 183-205 (388)
272 3myv_A SUSD superfamily protei 39.1 55 0.0019 27.7 5.9 48 2-60 164-219 (454)
273 2zan_A Vacuolar protein sortin 36.3 7.5 0.00026 33.1 0.0 18 45-62 6-23 (444)
274 2rpa_A Katanin P60 ATPase-cont 34.4 23 0.00079 24.2 2.3 16 45-60 26-41 (78)
275 1v54_D Cytochrome C oxidase su 34.3 28 0.00097 26.5 3.0 22 122-143 81-103 (147)
276 1wwp_A Hypothetical protein TT 34.3 59 0.002 22.8 4.6 47 47-93 2-50 (119)
277 3rau_A Tyrosine-protein phosph 34.0 26 0.00088 29.5 3.0 40 20-59 117-161 (363)
278 2br9_A 14-3-3E, 14-3-3 protein 33.7 57 0.0019 26.3 4.9 65 2-73 146-221 (234)
279 3umh_A Amyloid beta A4 protein 33.6 1.9E+02 0.0064 23.3 8.5 77 3-88 102-194 (211)
280 3t5v_B Nuclear mRNA export pro 33.1 23 0.0008 31.0 2.6 32 22-64 222-254 (455)
281 3c3r_A Programmed cell death 6 33.0 34 0.0012 28.8 3.6 38 20-57 142-184 (380)
282 1wy6_A Hypothetical protein ST 32.1 88 0.003 24.5 5.5 36 14-60 119-154 (172)
283 1jog_A Hypothetical protein HI 31.9 28 0.00095 25.7 2.6 50 45-94 9-70 (146)
284 2lxb_A Small glutamine-rich te 31.9 35 0.0012 23.3 2.8 20 2-21 35-54 (74)
285 1zb1_A BRO1 protein; AIP1, BRO 31.6 23 0.00077 29.9 2.2 40 19-58 122-163 (392)
286 3mcx_A SUSD superfamily protei 31.6 92 0.0032 26.4 6.1 49 2-61 176-232 (477)
287 3dfb_A Metal-binding protein S 31.1 57 0.0019 23.2 3.9 37 2-57 52-88 (93)
288 3kez_A Putative sugar binding 30.7 84 0.0029 26.6 5.7 48 2-60 170-225 (461)
289 3qtm_A Uncharacterized protein 30.6 1.6E+02 0.0053 25.3 7.2 57 2-59 101-170 (346)
290 1o9d_A 14-3-3-like protein C; 29.9 70 0.0024 26.3 4.9 50 2-58 151-205 (260)
291 4b4t_R RPN7, 26S proteasome re 29.2 19 0.00064 30.4 1.3 36 17-63 128-163 (429)
292 2y69_D Cytochrome C oxidase su 29.0 38 0.0013 26.4 3.0 23 121-143 102-125 (169)
293 3r9m_A BRO1 domain-containing 28.6 52 0.0018 27.6 4.0 40 20-59 114-161 (376)
294 3pmr_A Amyloid-like protein 1; 28.4 2.3E+02 0.008 22.8 8.5 77 3-88 109-201 (219)
295 2wb7_A PT26-6P; extra chromoso 28.0 37 0.0013 30.9 3.0 20 40-59 441-460 (526)
296 3s6n_M SurviVal motor neuron p 28.0 62 0.0021 19.4 3.1 16 46-61 17-32 (37)
297 4gq4_A Menin; tumor suppressor 26.6 2.1E+02 0.0072 25.8 7.6 71 5-89 283-365 (489)
298 1om2_A Protein (mitochondrial 26.4 75 0.0026 22.4 3.9 29 25-64 25-53 (95)
299 3u84_A Menin; MLL, JUND, ledgf 26.2 1.7E+02 0.0058 26.6 6.9 70 5-88 298-379 (550)
300 3snx_A SUSD homolog, putative 25.7 95 0.0032 26.5 5.1 47 3-60 161-220 (460)
301 3lew_A SUSD-like carbohydrate 25.0 1.3E+02 0.0044 25.8 5.9 48 2-60 174-232 (495)
302 3ffl_A Anaphase-promoting comp 24.7 1.6E+02 0.0055 22.6 5.8 13 2-14 79-91 (167)
303 2npm_A 14-3-3 domain containin 23.9 1.1E+02 0.0036 25.2 4.9 65 2-73 172-246 (260)
304 1sf8_A Chaperone protein HTPG; 23.8 30 0.001 25.3 1.4 35 55-91 67-101 (126)
305 3re2_A Predicted protein; meni 23.6 2.5E+02 0.0086 25.0 7.4 71 5-89 276-358 (472)
306 3iqu_A 14-3-3 protein sigma; s 23.6 1.2E+02 0.0039 24.6 5.0 65 2-73 149-224 (236)
307 3pmr_A Amyloid-like protein 1; 23.2 1E+02 0.0036 24.9 4.6 22 44-65 105-126 (219)
308 3bu8_A Telomeric repeat-bindin 23.2 56 0.0019 26.9 3.0 43 44-86 127-170 (235)
309 3mkq_A Coatomer beta'-subunit; 23.2 1.5E+02 0.0052 25.2 5.9 12 1-12 696-707 (814)
310 1s6c_B Potassium voltage-gated 23.1 14 0.00049 21.3 -0.4 13 132-144 16-28 (30)
311 1skh_A Major prion protein 2; 22.5 46 0.0016 19.2 1.7 20 121-141 5-26 (30)
312 3uzd_A 14-3-3 protein gamma; s 21.4 1.3E+02 0.0045 24.5 4.9 65 2-73 147-222 (248)
313 3esl_A Checkpoint serine/threo 21.0 2.3E+02 0.008 22.3 6.2 52 2-62 95-146 (202)
314 3umh_A Amyloid beta A4 protein 20.5 1.2E+02 0.0042 24.3 4.5 22 44-65 98-119 (211)
315 3hdx_A SUSD homolog, SUSD supe 20.3 1.8E+02 0.0063 24.5 5.9 30 20-60 197-226 (478)
316 2jo1_A Phospholemman; FXYD1, N 20.1 51 0.0017 22.5 1.8 10 113-122 4-13 (72)
No 1
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.94 E-value=7.4e-27 Score=182.33 Aligned_cols=89 Identities=60% Similarity=0.966 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhcCchh
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPEL 80 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~kapel 80 (152)
|+++||+.|++||+|||++++||||||+||+++|+++|+..++.++|++|++||+|||++||+|+.|++++++++|+||+
T Consensus 61 ~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~el 140 (158)
T 1zu2_A 61 MIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQL 140 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHhc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhh
Q 031846 81 HMEIHKHGL 89 (152)
Q Consensus 81 ~~e~~~~~~ 89 (152)
|.++|++++
T Consensus 141 ~~~~~~~~~ 149 (158)
T 1zu2_A 141 HAEAYKQGL 149 (158)
T ss_dssp HHHHHHSSS
T ss_pred cCccccccc
Confidence 999999965
No 2
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.47 E-value=2.5e-13 Score=96.79 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|++||+++|++.++|+++|.+|..+| ++++|+++|++||+++|++.
T Consensus 28 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 96 (126)
T 4gco_A 28 DYPTAMRHYNEAVKRDPENAILYSNRAACLTKLM-----------EFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMRE 96 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhc-----------cHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCC
Confidence 3789999999999999999999999999999765 99999999999999999985
Q ss_pred ------HHHHHHHHHhcCchhhHHHHH
Q 031846 66 ------LYQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 66 ------~YrkaLe~~~kapel~~e~~~ 86 (152)
.|++++++.+..++.+..|.+
T Consensus 97 ~~~A~~~~~~al~l~P~~~~a~~~l~~ 123 (126)
T 4gco_A 97 WSKAQRAYEDALQVDPSNEEAREGVRN 123 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence 477777777777777766654
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.44 E-value=6.6e-13 Score=96.42 Aligned_cols=78 Identities=12% Similarity=0.063 Sum_probs=65.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++|+++|++.++|++||.+|..+| ++++|+.+|++|++++|+|.
T Consensus 46 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 114 (150)
T 4ga2_A 46 EYDLAKKYICTYINVQERDPKAHRFLGLLYELEE-----------NTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDV 114 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------chHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999765 99999999999999999985
Q ss_pred ------HH-HHHHHHHhcCchhhHHHHHhhh
Q 031846 66 ------LY-QKSLEVAAKAPELHMEIHKHGL 89 (152)
Q Consensus 66 ------~Y-rkaLe~~~kapel~~e~~~~~~ 89 (152)
.| ++++++.+..|+++.-..+-+.
T Consensus 115 ~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 115 TDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp SSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 23 6778888888877654444333
No 4
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.40 E-value=1.1e-12 Score=93.42 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~ 74 (152)
.+++|+..|++||++||++.++|++||.+|..+| ++++|+++|++||+++|+|...+..|..+
T Consensus 62 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~-----------~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 62 EFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMR-----------EWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 4789999999999999999999999999999865 99999999999999999999988887643
No 5
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.33 E-value=1.6e-12 Score=101.16 Aligned_cols=81 Identities=15% Similarity=0.177 Sum_probs=66.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
++++|+..|++|+++||+++++|+|+|+++..++.+ ..-.+|++.+++|+.+|++||++||++.
T Consensus 17 ~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~-~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~ 95 (158)
T 1zu2_A 17 LFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQF-HSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAF 95 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhccc-chhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcc
Confidence 379999999999999999999999999999987532 1234466789999999999999999995
Q ss_pred ----------HHHHHHHHHhcCchhhH
Q 031846 66 ----------LYQKSLEVAAKAPELHM 82 (152)
Q Consensus 66 ----------~YrkaLe~~~kapel~~ 82 (152)
.|.++++++.+|.++.+
T Consensus 96 l~P~~~~a~g~~~eA~~~~~kAl~l~P 122 (158)
T 1zu2_A 96 LTPDETEAKHNFDLATQFFQQAVDEQP 122 (158)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cCcchhhhhccHHHHHHHHHHHHHhCC
Confidence 36667777777766654
No 6
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.33 E-value=6.8e-13 Score=94.14 Aligned_cols=53 Identities=11% Similarity=0.101 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|++||+++|++..+|+|||.+|..+| +|++|+++|++||+++|++
T Consensus 23 ~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~-----------~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 23 DFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEK-----------KFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhh-----------hHHHHHHHHHHHHHhCccc
Confidence 4799999999999999999999999999999865 9999999999999999976
No 7
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.32 E-value=8.1e-12 Score=85.78 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++|++..+|+++|.+|..+| ++++|+.+|++|++++|++.
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 72 (126)
T 3upv_A 19 DWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLM-----------SFPEAIADCNKAIEKDPNFV 72 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCcH
Confidence 3789999999999999999999999999999865 99999999999999999986
No 8
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.31 E-value=6e-12 Score=88.75 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++|+++|++.++|++||.++...| ++++|+.+|++|++++|++..
T Consensus 32 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~P~~~~ 86 (121)
T 1hxi_A 32 NLAEAALAFEAVCQKEPEREEAWRSLGLTQAENE-----------KDGLAIIALNHARMLDPKDIA 86 (121)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCHH
Confidence 3689999999999999999999999999999765 999999999999999999964
No 9
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.30 E-value=1e-12 Score=94.83 Aligned_cols=72 Identities=21% Similarity=0.206 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH--------------HH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------LY 67 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------~Y 67 (152)
+++|+..++++++++|++.+++++||.+|..+| ++++|+++|+++++++|+|. .|
T Consensus 89 ~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 89 KQAAIDALQRAIALNTVYADAYYKLGLVYDSMG-----------EHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHhC-----------CchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCH
Confidence 466777777777777777777777777776543 67777777777777777664 25
Q ss_pred HHHHHHHhcCchhhHHH
Q 031846 68 QKSLEVAAKAPELHMEI 84 (152)
Q Consensus 68 rkaLe~~~kapel~~e~ 84 (152)
.++++.+.++.+++++-
T Consensus 158 ~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 158 DEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHhCCccC
Confidence 55566666666555543
No 10
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.30 E-value=4.7e-12 Score=94.52 Aligned_cols=54 Identities=13% Similarity=-0.002 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++++++||+++++|++||.+|..+| +|++|+++|++|++++|+|.
T Consensus 51 ~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g-----------~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 51 RIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKE-----------QFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSSSCC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------cHHHHHHHHHHHHhhCCCCc
Confidence 3789999999999999999999999999999765 99999999999999999985
No 11
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.28 E-value=2.6e-11 Score=86.03 Aligned_cols=54 Identities=13% Similarity=0.089 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.++|++||.+|...| ++++|+.+|++|++++|+|.
T Consensus 33 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 86 (142)
T 2xcb_A 33 KWDDAQKIFQALCMLDHYDARYFLGLGACRQSLG-----------LYEQALQSYSYGALMDINEP 86 (142)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCT
T ss_pred cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHhcCCCCc
Confidence 3789999999999999999999999999999764 99999999999999999985
No 12
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.27 E-value=2.5e-11 Score=80.12 Aligned_cols=70 Identities=26% Similarity=0.283 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHhcCCCChH-HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH------HHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHD-TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL------YQKSLEV 73 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~d-A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~------YrkaLe~ 73 (152)
.+++|+..|+++++++|++.. ++++||.+|..+ +++++|+++|++|++++|++.. +.++++.
T Consensus 15 ~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~~ 83 (99)
T 2kc7_A 15 DIENALQALEEFLQTEPVGKDEAYYLMGNAYRKL-----------GDWQKALNNYQSAIELNPDSPALQARKMVMDILNF 83 (99)
T ss_dssp CHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 378999999999999999999 999999999975 4999999999999999999864 3455555
Q ss_pred HhcCchhh
Q 031846 74 AAKAPELH 81 (152)
Q Consensus 74 ~~kapel~ 81 (152)
+.+...+.
T Consensus 84 ~~~~~~~~ 91 (99)
T 2kc7_A 84 YNKDMYNQ 91 (99)
T ss_dssp HCCTTHHH
T ss_pred HHHHhccC
Confidence 55555444
No 13
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.27 E-value=2.4e-11 Score=88.38 Aligned_cols=71 Identities=13% Similarity=0.088 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++++++|++.++|++||.+|..+| ++++|+++|++|++++|+|.
T Consensus 36 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 104 (148)
T 2vgx_A 36 XYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMG-----------QYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGE 104 (148)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCC
Confidence 3789999999999999999999999999999765 99999999999999999984
Q ss_pred ------HHHHHHHHHhcCchhhH
Q 031846 66 ------LYQKSLEVAAKAPELHM 82 (152)
Q Consensus 66 ------~YrkaLe~~~kapel~~ 82 (152)
.|++++++.+..|+.+.
T Consensus 105 ~~~A~~~~~~al~~~p~~~~~~~ 127 (148)
T 2vgx_A 105 LAEAESGLFLAQELIANXPEFXE 127 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGHH
T ss_pred HHHHHHHHHHHHHHCcCCCcchH
Confidence 46777777777776643
No 14
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.27 E-value=3.3e-12 Score=92.70 Aligned_cols=80 Identities=10% Similarity=0.148 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++||+.|++++..+|+++.++|+||++|...| +|++|+++|++||+++|+|.
T Consensus 13 ~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~-----------~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 13 VERYIASVQGSTPSPRQKSIKGFYFAKLYYEAK-----------EYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp HHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcccCcccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 689999999999999999999999999999865 99999999999999999995
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|++++++.+..++.+..+..-...++
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 113 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKND 113 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 588999999999999999988776554
No 15
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.26 E-value=1.5e-11 Score=91.76 Aligned_cols=62 Identities=15% Similarity=0.114 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~ 73 (152)
.+++|+..|++|++++|+++++|++||++|..+| ++++|+.+|++|++++|+++.-+++-++
T Consensus 85 ~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg-----------~~~eA~~~~~~al~l~~~~~~~~~A~~l 146 (151)
T 3gyz_A 85 QFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLK-----------APLKAKECFELVIQHSNDEKLKIKAQSY 146 (151)
T ss_dssp CHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 4799999999999999999999999999999865 9999999999999999999866655544
No 16
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.25 E-value=3.8e-11 Score=86.35 Aligned_cols=69 Identities=20% Similarity=0.153 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++|+++|++..+|++||.+|..+| +|++|+.+|++|++++|+|.
T Consensus 26 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 94 (164)
T 3sz7_A 26 EYSKAIDLYTQALSIAPANPIYLSNRAAAYSASG-----------QHEKAAEDAELATVVDPKYSKAWSRLGLARFDMAD 94 (164)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC
Confidence 3789999999999999999999999999998764 89999999999999999885
Q ss_pred ------HHHHHHHHHhcCchh
Q 031846 66 ------LYQKSLEVAAKAPEL 80 (152)
Q Consensus 66 ------~YrkaLe~~~kapel 80 (152)
.|++++++.+..++.
T Consensus 95 ~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 95 YKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp HHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHHHHHHHHHHHhCCCchHH
Confidence 477777777777773
No 17
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.21 E-value=4e-11 Score=86.06 Aligned_cols=63 Identities=11% Similarity=0.167 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH-HHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-LYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne-~YrkaLe~~ 74 (152)
.+++|+..|++||+++|++..+|+++|.+|..+| +|++|+.+|++|++++|+|. ..++.|...
T Consensus 78 ~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g-----------~~~~A~~~~~~al~l~p~~~~~~~~~l~~~ 141 (162)
T 3rkv_A 78 DLHEAEETSSEVLKREETNEKALFRRAKARIAAW-----------KLDEAEEDLKLLLRNHPAAASVVAREMKIV 141 (162)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHh-----------cHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3789999999999999999999999999999865 99999999999999999998 666666543
No 18
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.20 E-value=4.5e-11 Score=82.23 Aligned_cols=53 Identities=17% Similarity=0.263 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhc---CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMV---SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~i---dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++|++ +|++..++++||.+|..+| +|++|+.+|++|++++|+|.
T Consensus 6 ~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 61 (117)
T 3k9i_A 6 EAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLG-----------EYRKAEAVLANGVKQFPNHQ 61 (117)
T ss_dssp -CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCch
Confidence 45667777777777 5667777777777776543 67777777777777777664
No 19
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.20 E-value=4.5e-11 Score=109.76 Aligned_cols=81 Identities=17% Similarity=0.244 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|++||+++|++.++|+|||++|..+ +++++|+++|+|||+++|++.
T Consensus 59 ~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~-----------g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~ 127 (723)
T 4gyw_A 59 LQEALMHYKEAIRISPTFADAYSNMGNTLKEM-----------QDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNI 127 (723)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 45555555555555555555555555555543 377777777777777777775
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhhccCC
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQT 93 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~~q~~ 93 (152)
.|+++|++.+..++.+.++...+..++-
T Consensus 128 ~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 128 PEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence 3677777777777777777776655553
No 20
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.2e-10 Score=76.78 Aligned_cols=53 Identities=11% Similarity=0.089 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++..++++||.+|..+| ++++|+++|++|++++|+|
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 19 LYREAVHCYDQLITAQPQNPVGYSNKAMALIKLG-----------EYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTSCSST
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCc
Confidence 3789999999999999999999999999999865 9999999999999999998
No 21
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.18 E-value=9.6e-11 Score=88.97 Aligned_cols=90 Identities=16% Similarity=0.207 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++|+++|++.+++++||.+|...+....+.....+++++|+.+|++|++++|++.
T Consensus 55 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~ 134 (217)
T 2pl2_A 55 VNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGER 134 (217)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCh
Confidence 6889999999999999999999999999987522222222223799999999999999999985
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|++++++. ..++.+..+......+|
T Consensus 135 ~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g 165 (217)
T 2pl2_A 135 DKAEASLKQALALE-DTPEIRSALAELYLSMG 165 (217)
T ss_dssp HHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc-cchHHHHHHHHHHHHcC
Confidence 467777777 77888888777665444
No 22
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.17 E-value=2.2e-10 Score=78.33 Aligned_cols=54 Identities=9% Similarity=-0.093 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++|++.+++++||.+|..+| ++++|+.+|++|++++|++.
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 24 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ-----------QPEQALADCRRALELDGQSV 77 (137)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCchhH
Confidence 4789999999999999999999999999999764 99999999999999999985
No 23
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.17 E-value=7e-11 Score=108.44 Aligned_cols=76 Identities=16% Similarity=0.257 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|++||+++|++.++|+|||++|..+| ++++|+++|++||+++|++.
T Consensus 25 ~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g-----------~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~ 93 (723)
T 4gyw_A 25 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG-----------KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDV 93 (723)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 455666666666666666666666666665543 56666666666666666552
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhh
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~ 88 (152)
.|++++++.+..++.|..+..-.
T Consensus 94 ~~A~~~~~kAl~l~P~~~~a~~~Lg~~~ 121 (723)
T 4gyw_A 94 QGALQCYTRAIQINPAFADAHSNLASIH 121 (723)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 35555555555555555555443
No 24
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.17 E-value=4.2e-11 Score=90.39 Aligned_cols=78 Identities=18% Similarity=0.325 Sum_probs=69.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHH----------------hHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWC----------------LGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~n----------------LGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++.++|++ ||.+|...| ++++|+.+|++||+++|+|
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 19 QNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNR-----------NYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHCCCC
Confidence 4789999999999999999999999 999999765 9999999999999999999
Q ss_pred H---------------------HHHHHHHHHhcCchhhHHHHHhhh
Q 031846 65 E---------------------LYQKSLEVAAKAPELHMEIHKHGL 89 (152)
Q Consensus 65 e---------------------~YrkaLe~~~kapel~~e~~~~~~ 89 (152)
. .|++++++.+..++.+..+.....
T Consensus 88 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 133 (208)
T 3urz_A 88 VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYY 133 (208)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 5 478888888888888888776543
No 25
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.16 E-value=4.5e-11 Score=92.98 Aligned_cols=72 Identities=17% Similarity=0.095 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHhcCCC-------ChH-----HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-------C
Q 031846 1 MILDAISKLEEALMVSPN-------RHD-----TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-------E 61 (152)
Q Consensus 1 mieeAIs~leeAL~idP~-------~~d-----A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-------d 61 (152)
.+++|+.+|++||+++|+ ++. +|+|+|.++..+| +|++|+.||++||++ +
T Consensus 26 ~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lg-----------r~~eAl~~~~kAL~l~n~~~e~~ 94 (159)
T 2hr2_A 26 EYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLR-----------SFDEALHSADKALHYFNRRGELN 94 (159)
T ss_dssp CHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHhhhccccCC
Confidence 479999999999999999 665 9999999999876 788888888888888 9
Q ss_pred CCcH--H----------------HHHHHHHHhcCchhhHH
Q 031846 62 PSNE--L----------------YQKSLEVAAKAPELHME 83 (152)
Q Consensus 62 P~Ne--~----------------YrkaLe~~~kapel~~e 83 (152)
|++. . |..+++.+.++.++.++
T Consensus 95 pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 95 QDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp STHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 9884 2 34455666666666554
No 26
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.16 E-value=1.7e-10 Score=87.64 Aligned_cols=81 Identities=17% Similarity=0.132 Sum_probs=66.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++|+++|++.+++++||.+|..+| ++++|+.+|++|++++|++.
T Consensus 20 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 88 (217)
T 2pl2_A 20 RYDAALTLFERALKENPQDPEALYWLARTQLKLG-----------LVNPALENGKTLVARTPRYLGGYMVLSEAYVALYR 88 (217)
T ss_dssp CHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhh
Confidence 3789999999999999999999999999999865 99999999999999999984
Q ss_pred -----------------HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 -----------------LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----------------~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|++++++.+..++.+..+..-...+|
T Consensus 89 ~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g 132 (217)
T 2pl2_A 89 QAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLG 132 (217)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcC
Confidence 234455556666666666666555444
No 27
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.16 E-value=1.7e-11 Score=84.32 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH---HHHHHHHHhcC
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL---YQKSLEVAAKA 77 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~---YrkaLe~~~ka 77 (152)
.+++|+..|+++|+++|++.+++++||.+|..+| ++++|+++|++|++++|+++. |.+++....+.
T Consensus 42 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~~~ai~~~~~~ 110 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLG-----------RYEQGVELLLKIIAETSDDETIQSYKQAILFYADK 110 (117)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHHCCCHHHHHTHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999754 999999999999999999874 66666665554
Q ss_pred c
Q 031846 78 P 78 (152)
Q Consensus 78 p 78 (152)
.
T Consensus 111 l 111 (117)
T 3k9i_A 111 L 111 (117)
T ss_dssp T
T ss_pred H
Confidence 3
No 28
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.16 E-value=2.3e-10 Score=73.15 Aligned_cols=60 Identities=28% Similarity=0.463 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaL 71 (152)
.+++|+..|+++++++|++..++++||.+|...| ++++|+.+|++|++++|++......+
T Consensus 24 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~~~p~~~~~~~~l 83 (91)
T 1na3_A 24 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG-----------DYDEAIEYYQKALELDPNNAEAKQNL 83 (91)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 3789999999999999999999999999999754 99999999999999999997665554
No 29
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.15 E-value=2.2e-10 Score=82.52 Aligned_cols=80 Identities=16% Similarity=0.118 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|++||++||++.+++++||.+|..+| ++++|+.+|++++..+|++.
T Consensus 20 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~-----------~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (184)
T 3vtx_A 20 DFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIG-----------LPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDE 88 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999999999865 88888888888888888875
Q ss_pred ------HHHHHHHHHhcCchhhHHHHHhhhcc
Q 031846 66 ------LYQKSLEVAAKAPELHMEIHKHGLGQ 91 (152)
Q Consensus 66 ------~YrkaLe~~~kapel~~e~~~~~~~q 91 (152)
.+.+++++.+..++.+..+......+
T Consensus 89 ~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~ 120 (184)
T 3vtx_A 89 KQAAIDALQRAIALNTVYADAYYKLGLVYDSM 120 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHh
Confidence 24555555566666666665544433
No 30
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.2e-10 Score=79.87 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC------CCcHHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE------PSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld------P~Ne~YrkaLe~~ 74 (152)
.+++|+..|+++|+++|++..+|++||.+|..+| ++++|+++|++|++++ |+|...+..+...
T Consensus 53 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~ 121 (126)
T 3upv_A 53 SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK-----------EYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 121 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh-----------CHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHH
Confidence 4789999999999999999999999999999865 9999999999999999 9998777777654
Q ss_pred h
Q 031846 75 A 75 (152)
Q Consensus 75 ~ 75 (152)
.
T Consensus 122 ~ 122 (126)
T 3upv_A 122 S 122 (126)
T ss_dssp H
T ss_pred H
Confidence 3
No 31
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.15 E-value=5.9e-11 Score=85.34 Aligned_cols=64 Identities=20% Similarity=0.215 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH--HHHHHHHHh
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL--YQKSLEVAA 75 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~--YrkaLe~~~ 75 (152)
.+++|+..|+++|+++|++..+|++||.+|..+| ++++|+.+|++|++++|+|.. +++.+....
T Consensus 60 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 60 QHEKAAEDAELATVVDPKYSKAWSRLGLARFDMA-----------DYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 4789999999999999999999999999999865 999999999999999999965 777776543
No 32
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.15 E-value=6.3e-11 Score=86.13 Aligned_cols=56 Identities=7% Similarity=-0.096 Sum_probs=51.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELY 67 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~Y 67 (152)
.+++|+..|+++|+++|++.+++++||.+|..+| ++++|+.+|++|++++|+|+.+
T Consensus 70 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 70 QYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXG-----------ELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHTTCGGG
T ss_pred hHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHCcCCCcc
Confidence 4789999999999999999999999999999765 9999999999999999997654
No 33
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.14 E-value=2.1e-10 Score=76.79 Aligned_cols=53 Identities=17% Similarity=0.100 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.++++++|.+|... +++++|+.+|++|++++|++.
T Consensus 32 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~ 84 (133)
T 2lni_A 32 YPQAMKHYTEAIKRNPKDAKLYSNRAACYTKL-----------LEFQLALKDCEECIQLEPTFI 84 (133)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCCch
Confidence 68999999999999999999999999999875 499999999999999999985
No 34
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.14 E-value=6.3e-11 Score=84.01 Aligned_cols=61 Identities=10% Similarity=0.030 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe 72 (152)
.+++|+..|+++++++|++++++++||.+|..+| ++++|+.+|++|++++|+|+.+....+
T Consensus 67 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~~~ 127 (142)
T 2xcb_A 67 LYEQALQSYSYGALMDINEPRFPFHAAECHLQLG-----------DLDGAESGFYSARALAAAQPAHEALAA 127 (142)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHTCGGGHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCcchHHHHH
Confidence 4789999999999999999999999999999865 999999999999999999876655443
No 35
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.11 E-value=1.5e-10 Score=83.07 Aligned_cols=74 Identities=15% Similarity=0.074 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHHHhc------------------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC
Q 031846 1 MILDAISKLEEALMV------------------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~leeAL~i------------------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP 62 (152)
.+++|+..|++||++ +|.+..+|+|||.+|..+| +|++|+.+|++||+++|
T Consensus 26 ~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~-----------~~~~A~~~~~~al~~~p 94 (162)
T 3rkv_A 26 DYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIG-----------DLHEAEETSSEVLKREE 94 (162)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC-----------cHHHHHHHHHHHHhcCC
Confidence 378999999999999 8888899999999999764 99999999999999999
Q ss_pred CcH---------------------HHHHHHHHHhcCc-hhhHHHH
Q 031846 63 SNE---------------------LYQKSLEVAAKAP-ELHMEIH 85 (152)
Q Consensus 63 ~Ne---------------------~YrkaLe~~~kap-el~~e~~ 85 (152)
+|. .|++++++.+..+ .+..++.
T Consensus 95 ~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~ 139 (162)
T 3rkv_A 95 TNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMK 139 (162)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 995 3666666666655 4444443
No 36
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.09 E-value=5e-10 Score=73.02 Aligned_cols=54 Identities=24% Similarity=0.158 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.++++++|.+|... +++++|+.+|+++++++|++.
T Consensus 19 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 72 (118)
T 1elw_A 19 NIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKK-----------GDYQKAYEDGCKTVDLKPDWG 72 (118)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhh-----------ccHHHHHHHHHHHHHhCcccH
Confidence 368899999999999999999999999999875 489999999999999999885
No 37
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.09 E-value=3.2e-10 Score=85.55 Aligned_cols=60 Identities=18% Similarity=0.087 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaL 71 (152)
.+++|+..|+++|+++|++.+++++||.+|...| ++++|+.+|++|++++|+|......+
T Consensus 69 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~P~~~~a~~~l 128 (208)
T 3urz_A 69 NYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRG-----------QEKDALRMYEKILQLEADNLAANIFL 128 (208)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 4789999999999999999999999999999754 99999999999999999997544443
No 38
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=6.2e-10 Score=76.04 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHhcCCCC---hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~---~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++ ..+++++|.+|...+ ++++|+.+|+++++++|++.
T Consensus 43 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 43 DYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLE-----------DYDKAETEASKAIEKDGGDV 99 (148)
T ss_dssp CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHTSCCH
T ss_pred CHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHc-----------cHHHHHHHHHHHHhhCccCH
Confidence 3678888888888888887 888888888887654 88888888888888888874
No 39
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.09 E-value=8.5e-11 Score=79.84 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++.++|++||.+|..+| ++++|+++|++|+++.|++
T Consensus 22 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 22 NASRALALFEELVETDPDYVGTYYHLGKLYERLD-----------RTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhhhcC
Confidence 4789999999999999999999999999999765 9999999999999998855
No 40
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.09 E-value=2.3e-10 Score=77.76 Aligned_cols=52 Identities=21% Similarity=0.289 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 3 eeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
++|+..|+++++++|++..++++||.+|...| ++++|+.+|++|++++|++.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 53 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHE-----------QFDAALPHLRAALDFDPTYS 53 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHHCCCcH
Confidence 67999999999999999999999999999764 99999999999999999985
No 41
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.07 E-value=1.1e-09 Score=72.35 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..+++++|.+|...| ++++|+++|+++++++|++.
T Consensus 28 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~ 80 (131)
T 2vyi_A 28 FEAAVHFYGKAIELNPANAVYFCNRAAAYSKLG-----------NYAGAVQDCERAICIDPAYS 80 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhh-----------chHHHHHHHHHHHhcCccCH
Confidence 688999999999999999999999999998754 89999999999999999885
No 42
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=8.2e-10 Score=75.41 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHh
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAA 75 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~ 75 (152)
.+++|+..|+++++++|++.++++++|.+|..+ +++++|+.+|+++++++|++..+...+....
T Consensus 80 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 80 DYDKAETEASKAIEKDGGDVKALYRRSQALEKL-----------GRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp CHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 378999999999999999999999999999875 4999999999999999999988877775543
No 43
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.05 E-value=9.6e-10 Score=81.93 Aligned_cols=67 Identities=15% Similarity=0.164 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHhcCC-CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH--------------
Q 031846 1 MILDAISKLEEALMVSP-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP-~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne-------------- 65 (152)
.+++|+..|+++|+++| .+..+++++|.+|..+| ++++|+++|++|++++|++.
T Consensus 22 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 90 (228)
T 4i17_A 22 NYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIK-----------KYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMK 90 (228)
T ss_dssp CHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhh-----------cHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcc
Confidence 36788888888888888 88888888888888754 88888888888888888874
Q ss_pred -------HHHHHHHHHhcCc
Q 031846 66 -------LYQKSLEVAAKAP 78 (152)
Q Consensus 66 -------~YrkaLe~~~kap 78 (152)
.|++++++.+..+
T Consensus 91 ~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 91 NNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp CHHHHHHHHHHHHHHSTTCH
T ss_pred cHHHHHHHHHHHHHHCCCcH
Confidence 3666666666666
No 44
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.05 E-value=5.2e-10 Score=94.74 Aligned_cols=53 Identities=4% Similarity=0.031 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|++||++||++.++|+++|.+|..+ +++++|+.+|++||+++|+|.
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~-----------g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL-----------RDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCccCH
Confidence 34444444444444444444444444444432 255555555666666666554
No 45
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.04 E-value=3.2e-10 Score=79.81 Aligned_cols=54 Identities=24% Similarity=0.150 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|++.+++++||.+|... +++++|+.+|+++++++|++.
T Consensus 66 ~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 66 KDGLAIIALNHARMLDPKDIAVHAALAVSHTNE-----------HNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCcCCC
Confidence 368999999999999999999999999999975 599999999999999999874
No 46
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.03 E-value=4e-10 Score=95.44 Aligned_cols=74 Identities=14% Similarity=0.076 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHh-HHHHHHHHHHHHHcCCCcH---------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEY-FNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~-~ekA~~~FqkAleldP~Ne--------------- 65 (152)
+++|+..|+++|++||++.++|+++|++|..+| + +++|+.+|++||+++|+|.
T Consensus 113 ~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g-----------~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~ 181 (382)
T 2h6f_A 113 SERAFKLTRDAIELNAANYTVWHFRRVLLKSLQ-----------KDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRD 181 (382)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcc-----------cCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccC
Confidence 456666666666666666666666666666543 3 6666666666666666652
Q ss_pred ------HHHHHHHHHhcCchhhHHHHH
Q 031846 66 ------LYQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 66 ------~YrkaLe~~~kapel~~e~~~ 86 (152)
.|+++|++.++.++.+..++.
T Consensus 182 ~~eAl~~~~kal~ldP~~~~a~~~lg~ 208 (382)
T 2h6f_A 182 PSQELEFIADILNQDAKNYHAWQHRQW 208 (382)
T ss_dssp CTTHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCHHHHHHHHH
Confidence 456666666655555554444
No 47
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.03 E-value=1.3e-10 Score=90.39 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHHhc-------CCCChHHH----HHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMV-------SPNRHDTL----WCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~i-------dP~~~dA~----~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.++||+..|++||++ +|++..+| ||+|++|..+| ++++|+.||++|++++|++.
T Consensus 72 r~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lg-----------r~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 72 SFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLG-----------RGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCcH
Confidence 378999999999999 99999999 99999999865 99999999999999999884
No 48
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.03 E-value=1.8e-09 Score=69.89 Aligned_cols=60 Identities=13% Similarity=0.153 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC--cHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS--NELYQKSL 71 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~--Ne~YrkaL 71 (152)
.+++|+..|+++++++|++.++++++|.+|..+| ++++|+++|+++++++|+ +......+
T Consensus 21 ~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~a~~~~~~~~~~~~~~~l 82 (112)
T 2kck_A 21 NYTESIDLFEKAIQLDPEESKYWLMKGKALYNLE-----------RYEEAVDCYNYVINVIEDEYNKDVWAAK 82 (112)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTSCCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 3789999999999999999999999999999764 999999999999999999 76544444
No 49
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.02 E-value=1.8e-09 Score=70.37 Aligned_cols=63 Identities=13% Similarity=0.091 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~ 74 (152)
.+++|+..|+++++++|++..+++++|.+|...| ++++|+++|+++++++|++......+...
T Consensus 53 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 53 DYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN-----------RFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 3789999999999999999999999999999764 99999999999999999998777666543
No 50
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.02 E-value=4.5e-10 Score=79.47 Aligned_cols=61 Identities=21% Similarity=0.272 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHhcCCCCh-------HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRH-------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~-------dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe 72 (152)
.+++|+..|++||+++|++. .+|++||++|..+ +++++|+++|++||+++|+.+..++..+
T Consensus 57 ~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~-----------~~~~~A~~~~~kal~~~~~~~~~~~l~~ 124 (127)
T 4gcn_A 57 KFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQ-----------NDLSLAVQWFHRSLSEFRDPELVKKVKE 124 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhhCcCHHHHHHHHH
Confidence 47899999999999999875 4788888888765 5999999999999999998777665444
No 51
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.01 E-value=2.3e-09 Score=74.45 Aligned_cols=52 Identities=13% Similarity=0.015 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++.++++++|.+|...| ++++|+++|++|++++|++
T Consensus 29 ~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~a~~~~~~~ 80 (166)
T 1a17_A 29 YENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE-----------CYGYALGDATRAIELDKKY 80 (166)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCccc
Confidence 445555555555555555555555555555432 5555555555555555554
No 52
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.00 E-value=1.9e-09 Score=72.91 Aligned_cols=53 Identities=25% Similarity=0.297 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHhcCCCCh---HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~---dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|++. +++++||.+|...| ++++|+.+|+++++++|++
T Consensus 17 ~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~-----------~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 17 KYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATR-----------NFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp CHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTS
T ss_pred CHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHHCCCC
Confidence 36788888888888888888 78888888888754 8888888888888888887
No 53
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.00 E-value=2.6e-09 Score=72.25 Aligned_cols=63 Identities=16% Similarity=0.121 Sum_probs=56.8
Q ss_pred CHHHHHHHHHHHHhcCCCC---hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~---~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~ 74 (152)
.+++|+..|+++++++|++ .+++++||.+|..+| ++++|+.+|+++++.+|+++....++...
T Consensus 54 ~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 54 NFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEG-----------KNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 3789999999999999999 999999999999765 99999999999999999999877766543
No 54
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.00 E-value=5.1e-10 Score=83.42 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.+++++||.+|..+| ++++|+++|++|++++|+|.
T Consensus 57 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 57 KYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMK-----------NNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp CHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCH
T ss_pred cHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHHCCCcH
Confidence 4789999999999999999999999999999865 99999999999999999987
No 55
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.00 E-value=1.4e-09 Score=75.56 Aligned_cols=55 Identities=11% Similarity=0.103 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++++++|++..+++++|.+|..+| ++++|+.+|+++++++|++..
T Consensus 62 ~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~a~~~~p~~~~ 116 (166)
T 1a17_A 62 CYGYALGDATRAIELDKKYIKGYYRRAASNMALG-----------KFRAALRDYETVVKVKPHDKD 116 (166)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCHH
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHhCCCCHH
Confidence 3789999999999999999999999999999765 999999999999999999864
No 56
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.99 E-value=3.4e-09 Score=69.40 Aligned_cols=54 Identities=30% Similarity=0.497 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.++++++|.+|...| ++++|+.+|+++++++|++.
T Consensus 24 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~ 77 (125)
T 1na0_A 24 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG-----------DYDEAIEYYQKALELDPNNA 77 (125)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHHhCCccH
Confidence 3688999999999999999999999999998754 89999999999999999875
No 57
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.98 E-value=1.5e-09 Score=88.74 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHhcCCCC---------------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNR---------------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~---------------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|++ ..+|+|||.+|..+| +|++|+.+|++||+++|+|.
T Consensus 162 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 230 (336)
T 1p5q_A 162 KYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQ-----------AFSAAIESCNKALELDSNNE 230 (336)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcH
Confidence 4789999999999999999 699999999999865 89999999999999999885
Q ss_pred ---------------------HHHHHHHHHhcCchhhHHHHH
Q 031846 66 ---------------------LYQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 66 ---------------------~YrkaLe~~~kapel~~e~~~ 86 (152)
.|++++++.+..++.+.++..
T Consensus 231 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~ 272 (336)
T 1p5q_A 231 KGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAV 272 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 366666666666666665554
No 58
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.97 E-value=3.2e-09 Score=78.35 Aligned_cols=77 Identities=16% Similarity=0.062 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHhcCCCCh----------------HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRH----------------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~----------------dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++. .++++||.+|..+| ++++|+.+|++|++++|++
T Consensus 53 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~al~~~p~~ 121 (198)
T 2fbn_A 53 EINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNK-----------DYPKAIDHASKVLKIDKNN 121 (198)
T ss_dssp CHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTC
T ss_pred CHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCccc
Confidence 47899999999999999998 89999999999764 9999999999999999998
Q ss_pred H---------------------HHHHHHHHHhcCchhhHHHHHhh
Q 031846 65 E---------------------LYQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 65 e---------------------~YrkaLe~~~kapel~~e~~~~~ 88 (152)
. .|++++++.+..++++..+.+-.
T Consensus 122 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 122 VKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 5 36666777777777666665543
No 59
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.97 E-value=2e-09 Score=79.42 Aligned_cols=63 Identities=22% Similarity=0.269 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~ 74 (152)
.+++|+..|+++|+++|++..+++++|.+|..+ +++++|+++|++|++++|++...+..+...
T Consensus 103 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 165 (198)
T 2fbn_A 103 DYPKAIDHASKVLKIDKNNVKALYKLGVANMYF-----------GFLEEAKENLYKAASLNPNNLDIRNSYELC 165 (198)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc-----------ccHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 378999999999999999999999999999875 499999999999999999998777666544
No 60
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.96 E-value=2.4e-09 Score=71.60 Aligned_cols=60 Identities=18% Similarity=0.124 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaL 71 (152)
.+++|+..|+++++++|++..++++||.+|...| ++++|+.+|+++++++|++......+
T Consensus 65 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~~~~~~p~~~~~~~~l 124 (133)
T 2lni_A 65 EFQLALKDCEECIQLEPTFIKGYTRKAAALEAMK-----------DYTKAMDVYQKALDLDSSCKEAADGY 124 (133)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCGGGTHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 3789999999999999999999999999999764 99999999999999999886544433
No 61
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.96 E-value=4.2e-09 Score=69.45 Aligned_cols=60 Identities=25% Similarity=0.392 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaL 71 (152)
.+++|+..|+++++++|++..+++++|.+|...| ++++|+.+|+++++++|++..+...+
T Consensus 61 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~~~~~~p~~~~~~~~l 120 (131)
T 2vyi_A 61 NYAGAVQDCERAICIDPAYSKAYGRMGLALSSLN-----------KHVEAVAYYKKALELDPDNETYKSNL 120 (131)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred chHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHhcCccchHHHHHH
Confidence 3789999999999999999999999999999754 99999999999999999987655544
No 62
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.95 E-value=8.5e-10 Score=85.61 Aligned_cols=67 Identities=24% Similarity=0.252 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHHhcC-C-CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhcCc
Q 031846 1 MILDAISKLEEALMVS-P-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAP 78 (152)
Q Consensus 1 mieeAIs~leeAL~id-P-~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~kap 78 (152)
+++++|..|++.++.+ | ++.|++|+||.+|++++ +|++|..||+++|+++|+|...+..+++.++..
T Consensus 50 ~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~-----------~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 50 DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK-----------EYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTS-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 3679999999999999 8 78999999999999865 999999999999999999999999988887543
No 63
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.93 E-value=3e-09 Score=86.91 Aligned_cols=60 Identities=27% Similarity=0.288 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaL 71 (152)
.+++|+..|++||+++|++..+|++||.+|..+| ++++|+.+|++|++++|+|......|
T Consensus 211 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~P~~~~a~~~l 270 (336)
T 1p5q_A 211 AFSAAIESCNKALELDSNNEKGLSRRGEAHLAVN-----------DFELARADFQKVLQLYPNNKAAKTQL 270 (336)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 4789999999999999999999999999999865 99999999999999999997544443
No 64
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.93 E-value=1.4e-09 Score=79.57 Aligned_cols=54 Identities=9% Similarity=0.042 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++..++++||.+|..+| ++++|+++|++|+++.|+|.
T Consensus 52 ~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 52 NMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTE-----------KYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTTTTCS
T ss_pred CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHhCCCcc
Confidence 3789999999999999999999999999999764 99999999999999999764
No 65
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.93 E-value=5.2e-10 Score=81.69 Aligned_cols=80 Identities=13% Similarity=0.014 Sum_probs=65.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH--------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------------- 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~-------------- 66 (152)
.+++|+..|+++|+++|++.+++++||.+|...| ++++|+.+|+++++++| +..
T Consensus 21 ~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g-----------~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~ 88 (176)
T 2r5s_A 21 EHAQALNVIQTLSDELQSRGDVKLAKADCLLETK-----------QFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQA 88 (176)
T ss_dssp CHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTT-----------CHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCC-----------CHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhc
Confidence 3689999999999999999999999999999765 99999999999999999 642
Q ss_pred --------HHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 67 --------YQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 67 --------YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
|++++++.+..++.+..+......+|
T Consensus 89 ~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g 122 (176)
T 2r5s_A 89 AESPELKRLEQELAANPDNFELACELAVQYNQVG 122 (176)
T ss_dssp TSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc
Confidence 44455556666777777777665444
No 66
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.92 E-value=1.6e-09 Score=74.00 Aligned_cols=52 Identities=15% Similarity=0.178 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|+++++++|++..++++||.+|..+| ++++|+.+|++|++++|+
T Consensus 58 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 58 QPEQALADCRRALELDGQSVKAHFFLGQCQLEME-----------SYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHChh
Confidence 3789999999999999999999999999999765 999999999999999998
No 67
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.91 E-value=1.7e-09 Score=85.87 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++|+++|++.+++++||.+|...| ++++|+.+|+++++++|++.
T Consensus 133 ~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g-----------~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~ 201 (287)
T 3qou_A 133 YTDALPLLXDAWQLSNQNGEIGLLLAETLIALN-----------RSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAAD 201 (287)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTT-----------CHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCC-----------CHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhccc
Confidence 689999999999999999999999999999765 99999999999999999653
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|+++++..+..++++..+...+..+|
T Consensus 202 ~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g 233 (287)
T 3qou_A 202 TPEIQQLQQQVAENPEDAALATQLALQLHQVG 233 (287)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHhcCCccHHHHHHHHHHHHHcc
Confidence 377778888888888888888776555
No 68
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.91 E-value=2.2e-09 Score=74.95 Aligned_cols=55 Identities=24% Similarity=0.199 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+.++|+..|++||++||++..|++.||+++...| +|++|+.+|+++++.+|+++.
T Consensus 24 ~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g-----------~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 24 MTDEVSLLLEQALQLEPYNEAALSLIANDHFISF-----------RFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTCCCTTCC
T ss_pred CCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhCCCCcc
Confidence 3579999999999999999999999999999865 999999999999999999543
No 69
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.91 E-value=2.3e-09 Score=95.81 Aligned_cols=81 Identities=16% Similarity=0.187 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++|+++|++.++|+++|++|..+| ++++|+++|++|++++|+|.
T Consensus 448 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~ 516 (681)
T 2pzi_A 448 DVAKATRKLDDLAERVGWRWRLVWYRAVAELLTG-----------DYDSATKHFTEVLDTFPGELAPKLALAATAELAGN 516 (681)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCC
Confidence 3789999999999999999999999999998754 99999999999999999884
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|++++++.+..++.|..+......+|
T Consensus 517 ~~~~~~~~~al~~~P~~~~a~~~lg~~~~~~g 548 (681)
T 2pzi_A 517 TDEHKFYQTVWSTNDGVISAAFGLARARSAEG 548 (681)
T ss_dssp CCTTCHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhCCchHHHHHHHHHHHHHcC
Confidence 377888888888888888887665554
No 70
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.90 E-value=4.6e-09 Score=87.93 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhcCchh
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPEL 80 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~kapel 80 (152)
.+++|+..|++||+++|++..+|++||.+|..+| ++++|+++|++|++++|+|..++..|.......+-
T Consensus 288 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-----------~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 288 DWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLK-----------EYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999764 99999999999999999999877777655444333
Q ss_pred hH
Q 031846 81 HM 82 (152)
Q Consensus 81 ~~ 82 (152)
+.
T Consensus 357 ~~ 358 (370)
T 1ihg_A 357 QK 358 (370)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 71
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.90 E-value=7.9e-09 Score=75.90 Aligned_cols=53 Identities=15% Similarity=0.155 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..++++||.+|...| ++++|+.+|+++++++|++.
T Consensus 155 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~al~~~~~~~ 207 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRAPEDARGYSNRAAALAKLM-----------SFPEAIADCNKAIEKDPNFV 207 (258)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHHhCHHHH
Confidence 688999999999999999999999999998754 89999999999999999885
No 72
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.88 E-value=1.2e-08 Score=66.64 Aligned_cols=61 Identities=28% Similarity=0.451 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe 72 (152)
.+++|+..|+++++++|++..++++||.+|...| ++++|+.+|+++++++|++...+..+.
T Consensus 58 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~~~~~~l~ 118 (125)
T 1na0_A 58 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG-----------DYDEAIEYYQKALELDPNNAEAKQNLG 118 (125)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 3789999999999999999999999999999754 999999999999999999987666654
No 73
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.88 E-value=5e-09 Score=75.35 Aligned_cols=53 Identities=8% Similarity=0.088 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHH-HHhcccCCCChHHHHHhH--HHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNA-HTSHAFLTPDQDEAKEYF--NKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnA-y~~~g~l~pd~~eA~~~~--ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.+++++||.+ |...| ++ ++|+.+|+++++++|++.
T Consensus 60 ~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~-----------~~~~~~A~~~~~~al~~~p~~~ 115 (177)
T 2e2e_A 60 YSNSLLAYRQALQLRGENAELYAALATVLYYQAS-----------QHMTAQTRAMIDKALALDSNEI 115 (177)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTT-----------TCCCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC-----------CcchHHHHHHHHHHHHhCCCcH
Confidence 4556666666666666666666666666 44332 44 555555555555555553
No 74
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.88 E-value=2e-09 Score=73.06 Aligned_cols=53 Identities=17% Similarity=0.132 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++.++|++||.+|... +++++|+.+|++|++++|++
T Consensus 34 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 34 QFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQ-----------GDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhcccc
Confidence 478999999999999999999999999999975 49999999999999999964
No 75
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.87 E-value=5.2e-09 Score=83.10 Aligned_cols=54 Identities=9% Similarity=-0.093 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|++..+|+++|.+|..+| ++++|+.+|++|++++|+|.
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 72 (281)
T 2c2l_A 19 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ-----------QPEQALADCRRALELDGQSV 72 (281)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHTTSCTTCH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCCH
Confidence 3789999999999999999999999999998764 99999999999999999985
No 76
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.87 E-value=6.6e-09 Score=89.54 Aligned_cols=75 Identities=13% Similarity=0.074 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|++||+++|++..+|++||.+|..+| ++++|+++|++|++++|++.
T Consensus 21 ~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~ 89 (477)
T 1wao_1 21 DYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE-----------CYGYALGDATRAIELDKKYIKGYYRRAASNMALGK 89 (477)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 3788999999999999999999999999998754 89999999999999999884
Q ss_pred ------HHHHHHHHHhcCchhhHHHHH
Q 031846 66 ------LYQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 66 ------~YrkaLe~~~kapel~~e~~~ 86 (152)
.|++++++.+..++.+..+..
T Consensus 90 ~~eA~~~~~~al~~~p~~~~~~~~l~~ 116 (477)
T 1wao_1 90 FRAALRDYETVVKVKPHDKDAKMKYQE 116 (477)
T ss_dssp HHHHHHHHHHHHHHSTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 366666666666666666554
No 77
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.86 E-value=6.3e-09 Score=68.85 Aligned_cols=53 Identities=13% Similarity=0.123 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|++..+++++|.+|... +++++|+.+|+++++++|++
T Consensus 19 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 19 DFDTALKHYDKAKELDPTNMTYITNQAAVYFEK-----------GDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHhhcccc
Confidence 378999999999999999999999999999875 49999999999999999875
No 78
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.86 E-value=4.5e-09 Score=89.60 Aligned_cols=61 Identities=18% Similarity=0.239 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe 72 (152)
.+++|+..|++||+++|++..+||++|.+|..+| +|++|+.+|++|++++|+|......|.
T Consensus 332 ~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g-----------~~~~A~~~~~~al~l~P~~~~a~~~l~ 392 (457)
T 1kt0_A 332 EYTKAVECCDKALGLDSANEKGLYRRGEAQLLMN-----------EFESAKGDFEKVLEVNPQNKAARLQIS 392 (457)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTC----CHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4789999999999999999999999999999865 999999999999999999975444443
No 79
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.86 E-value=4.7e-09 Score=89.48 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHHhcCCCC---------------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNR---------------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~---------------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|++ ..+|+|||.+|..+| +|++|+.+|++||+++|+|.
T Consensus 283 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 351 (457)
T 1kt0_A 283 KYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLR-----------EYTKAVECCDKALGLDSANE 351 (457)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCH
T ss_pred CHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHhcCCccH
Confidence 4789999999999999999 699999999999865 99999999999999999995
No 80
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.85 E-value=1.2e-08 Score=76.13 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++.+++++||.+|...| ++++|+++|++|++++|++
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~al~~~~~~ 110 (275)
T 1xnf_A 59 RALARNDFSQALAIRPDMPEVFNYLGIYLTQAG-----------NFDAAYEAFDSVLELDPTY 110 (275)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHhcCccc
Confidence 566666666666666666666666666666543 6666666666666666655
No 81
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.85 E-value=7.7e-09 Score=81.46 Aligned_cols=75 Identities=16% Similarity=0.153 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH--------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------------- 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~-------------- 66 (152)
.+++|+..|+++++++|++.+++++||.+|..+| ++++|+.+|++|++++|++..
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 148 (365)
T 4eqf_A 80 DLPVTILFMEAAILQDPGDAEAWQFLGITQAENE-----------NEQAAIVALQRCLELQPNNLKALMALAVSYTNTSH 148 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHcccc
Confidence 4789999999999999999999999999999865 999999999999999999862
Q ss_pred HHHHHHHHhcCchhhHHHHH
Q 031846 67 YQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 67 YrkaLe~~~kapel~~e~~~ 86 (152)
|.++++.+.++.+++++...
T Consensus 149 ~~~A~~~~~~al~~~p~~~~ 168 (365)
T 4eqf_A 149 QQDACEALKNWIKQNPKYKY 168 (365)
T ss_dssp HHHHHHHHHHHHHHCHHHHC
T ss_pred HHHHHHHHHHHHHhCccchH
Confidence 56666666666666655433
No 82
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.84 E-value=1.2e-08 Score=87.38 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++|+++|++.+++++||.+|..+| ++++|+++|++|++++|++.
T Consensus 38 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 106 (568)
T 2vsy_A 38 DTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQ-----------RHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQ 106 (568)
T ss_dssp CHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Confidence 3678888888888888888888888888888654 88888888888888888874
Q ss_pred ------HHHHHHHHHhcCchhhHHHHHhhhcc
Q 031846 66 ------LYQKSLEVAAKAPELHMEIHKHGLGQ 91 (152)
Q Consensus 66 ------~YrkaLe~~~kapel~~e~~~~~~~q 91 (152)
.|++++++.+..++.+..+......+
T Consensus 107 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 107 AEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 36666666666666666666555444
No 83
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.83 E-value=1.4e-08 Score=80.05 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHhcCCC--ChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH--------------
Q 031846 2 ILDAISKLEEALMVSPN--RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~--~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne-------------- 65 (152)
+++|+..|+++++++|+ +.+++++||.+|..+| ++++|+++|++|++++|++.
T Consensus 193 ~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 261 (365)
T 4eqf_A 193 LEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSG-----------EFNRAIDAFNAALTVRPEDYSLWNRLGATLANGD 261 (365)
T ss_dssp HHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 56777777777777777 7777777777777643 77777777777777777764
Q ss_pred -------HHHHHHHHHhcCchhhHHHHHhh
Q 031846 66 -------LYQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 66 -------~YrkaLe~~~kapel~~e~~~~~ 88 (152)
.|++++++.+..++.+..+..-.
T Consensus 262 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 291 (365)
T 4eqf_A 262 RSEEAVEAYTRALEIQPGFIRSRYNLGISC 291 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 35555555555555555555543
No 84
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.83 E-value=1.9e-08 Score=80.05 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..++++++++|.+.++|++||.+|... +++++|+++|++|++++|++.
T Consensus 49 ~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 117 (388)
T 1w3b_A 49 LDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER-----------GQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDM 117 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCH
Confidence 46677777777777777777777777777654 378888888888888888774
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhh
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGL 89 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~ 89 (152)
.|+++++..+..+..+..+..-..
T Consensus 118 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 146 (388)
T 1w3b_A 118 EGAVQAYVSALQYNPDLYCVRSDLGNLLK 146 (388)
T ss_dssp SHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 355556666666666655555444
No 85
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.82 E-value=2.7e-09 Score=87.45 Aligned_cols=63 Identities=17% Similarity=0.210 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~ 74 (152)
.+++|+..|++||+++|++..+||+||.+|..+| +|++|+.+|++|++++|+|...+..|...
T Consensus 245 ~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g-----------~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 245 RYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELG-----------QMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT-----------CHHHHHHHHHHTTC---------------
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3689999999999999999999999999999865 99999999999999999998777666544
No 86
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.82 E-value=2.2e-08 Score=77.99 Aligned_cols=53 Identities=21% Similarity=0.183 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..++++||.+|...| ++++|+.+|++|++++|++.
T Consensus 233 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~~~~~ 285 (368)
T 1fch_A 233 YDKAVDCFTAALSVRPNDYLLWNKLGATLANGN-----------QSEEAVAAYRRALELQPGYI 285 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcH
Confidence 456666666666666666666666666665543 66666666666666666654
No 87
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.81 E-value=1.6e-08 Score=77.24 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaL 71 (152)
+++|+..|+++++++|++.++++++|.+|...| ++++|+++|++|++++|+|+..+..|
T Consensus 288 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~~A~~~~~~a~~~~p~~~~~~~~l 346 (359)
T 3ieg_A 288 PVEAIRICSEVLQMEPDNVNALKDRAEAYLIEE-----------MYDEAIQDYEAAQEHNENDQQIREGL 346 (359)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 456666666666666666666666666666543 66666666666666666665544444
No 88
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.81 E-value=2.2e-08 Score=79.78 Aligned_cols=77 Identities=18% Similarity=0.159 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++++++|++..+|++||.+|...| ++++|+.+|++|++++|++.
T Consensus 151 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~ 219 (388)
T 1w3b_A 151 LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG-----------EIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIF 219 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCH
Confidence 456666666666666666666666666666543 66777777777777777663
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhh
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGL 89 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~ 89 (152)
.|++++++.+..+..+..+..-..
T Consensus 220 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 248 (388)
T 1w3b_A 220 DRAVAAYLRALSLSPNHAVVHGNLACVYY 248 (388)
T ss_dssp THHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcCCHHHHHHHHHHHH
Confidence 345555555555555555554433
No 89
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.80 E-value=1e-08 Score=87.41 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC---CcH-------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP---SNE------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP---~Ne------------- 65 (152)
+++|+..|++||+++|++.++|++||++|..+.|..-+ ..+++++|+++|++|++++| ++.
T Consensus 195 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~---~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~ 271 (474)
T 4abn_A 195 VMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQ---NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYE 271 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTC---CHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhcc---ccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHc
Confidence 68999999999999999999999999999865110000 11589999999999999999 664
Q ss_pred --------HHHHHHHHHhcCchhhHHHHH
Q 031846 66 --------LYQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 66 --------~YrkaLe~~~kapel~~e~~~ 86 (152)
.|++++++.+..++.+..+.+
T Consensus 272 g~~~~A~~~~~~al~l~p~~~~a~~~l~~ 300 (474)
T 4abn_A 272 ESYGEALEGFSQAAALDPAWPEPQQREQQ 300 (474)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 366666666666655555543
No 90
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.79 E-value=5.2e-09 Score=85.02 Aligned_cols=55 Identities=22% Similarity=0.055 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|++||+++|+++++++++|+++..++.+ +++++|+++|++|++++|++
T Consensus 154 y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~--------~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW--------PPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS--------CCCCCTHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc--------hHHHHHHHHHHHHhhcCCcc
Confidence 68999999999999999999999999998765421 24445555555555555554
No 91
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.79 E-value=4.3e-08 Score=68.04 Aligned_cols=53 Identities=17% Similarity=0.200 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..+++++|.+|... +++++|+++|+++++++|++.
T Consensus 58 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 110 (186)
T 3as5_A 58 VDRGTELLERSLADAPDNVKVATVLGLTYVQV-----------QKYDLAVPLLIKVAEANPINF 110 (186)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhcCcHhH
Confidence 45666666666666666666666666666543 366666666666666666654
No 92
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.78 E-value=6.2e-08 Score=63.46 Aligned_cols=54 Identities=26% Similarity=0.439 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++..+++++|.++... +++++|+.+|+++++++|++.
T Consensus 16 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 69 (136)
T 2fo7_A 16 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ-----------GDYDEAIEYYQKALELDPRSA 69 (136)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHh-----------cCHHHHHHHHHHHHHHCCCch
Confidence 368999999999999999999999999998864 489999999999999999875
No 93
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.78 E-value=2.7e-08 Score=79.63 Aligned_cols=54 Identities=17% Similarity=0.121 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+++|+..|+++++.+|++..++++||.+|..+| ++++|..+|++||+++|+|..
T Consensus 182 ~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g-----------~~~eA~~~l~~al~~~p~~~~ 235 (291)
T 3mkr_A 182 LQDAYYIFQEMADKCSPTLLLLNGQAACHMAQG-----------RWEAAEGVLQEALDKDSGHPE 235 (291)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCHH
Confidence 689999999999999999999999999998765 999999999999999999874
No 94
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.78 E-value=1.3e-08 Score=76.27 Aligned_cols=78 Identities=15% Similarity=0.111 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH--------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------------- 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~-------------- 66 (152)
.+++|+..|+++++++|++.+++++||.+|...| ++++|+++|++|++++|++..
T Consensus 89 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~ 157 (272)
T 3u4t_A 89 QDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKG-----------NFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKE 157 (272)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999998764 999999999999999998852
Q ss_pred -------HHHHHHHHhcCchhhHHHHHhhh
Q 031846 67 -------YQKSLEVAAKAPELHMEIHKHGL 89 (152)
Q Consensus 67 -------YrkaLe~~~kapel~~e~~~~~~ 89 (152)
|++++++.+..++.+..+.+-..
T Consensus 158 ~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 187 (272)
T 3u4t_A 158 YVKADSSFVKVLELKPNIYIGYLWRARANA 187 (272)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 34445555555555555555443
No 95
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.77 E-value=2.1e-08 Score=72.06 Aligned_cols=59 Identities=17% Similarity=0.204 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031846 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 3 eeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe 72 (152)
++|+..|+++++++|++..++++||.+|...| ++++|+.+|+++++++|++......++
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~~~ 156 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDAFMQA-----------NYAQAIELWQKVMDLNSPRINRTQLVE 156 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTCCTTSCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHhhCCCCccHHHHHH
Confidence 55666666666666666666666666665533 666666666666666665543333333
No 96
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.76 E-value=4.8e-08 Score=71.52 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..+++++|.+|...| ++++|+++|+++++++|++.
T Consensus 73 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~ 125 (243)
T 2q7f_A 73 LERALAFYDKALELDSSAATAYYGAGNVYVVKE-----------MYKEAKDMFEKALRAGMENG 125 (243)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHTCCSH
T ss_pred HHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHhCCCCH
Confidence 577888888888888888888888888887654 78888888888888888774
No 97
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.75 E-value=1.3e-08 Score=87.09 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++++++|++.++|++||.+|... +++++|+++|++|++++|++.
T Consensus 5 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~ 73 (568)
T 2vsy_A 5 GPRELLQLRAAVRHRPQDFVAWLMLADAELGM-----------GDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRH 73 (568)
T ss_dssp ----------------CCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCH
Confidence 68999999999999999999999999999975 499999999999999999985
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|++++++.+..++.+..+......+|
T Consensus 74 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 105 (568)
T 2vsy_A 74 AEAAVLLQQASDAAPEHPGIALWLGHALEDAG 105 (568)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Confidence 477778888888888888777655444
No 98
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.74 E-value=3.5e-08 Score=80.09 Aligned_cols=78 Identities=12% Similarity=0.148 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHhcC--------CCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH------
Q 031846 1 MILDAISKLEEALMVS--------PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL------ 66 (152)
Q Consensus 1 mieeAIs~leeAL~id--------P~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~------ 66 (152)
.+++|+..|+++++++ ++..+++.++|.++..+| .++|++|++||++|++++|+|..
T Consensus 109 ~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~---------~~~y~~A~~~~~kal~~~p~~~~~~~~~~ 179 (472)
T 4g1t_A 109 RLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCG---------GNQNERAKVCFEKALEKKPKNPEFTSGLA 179 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHC---------TTHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHc---------cccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3789999999999874 467889999999998766 46899999999999999999962
Q ss_pred ------------------HHHHHHHHhcCchhhHHHHHh
Q 031846 67 ------------------YQKSLEVAAKAPELHMEIHKH 87 (152)
Q Consensus 67 ------------------YrkaLe~~~kapel~~e~~~~ 87 (152)
|++++++.+..++++..+...
T Consensus 180 ~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~ 218 (472)
T 4g1t_A 180 IASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALK 218 (472)
T ss_dssp HHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHH
Confidence 556666666666666555543
No 99
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.74 E-value=3.1e-08 Score=68.75 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++++++|++..+++.+|.+|...| ++++|+++|+++++++|++.
T Consensus 23 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 91 (186)
T 3as5_A 23 RYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTG-----------AVDRGTELLERSLADAPDNVKVATVLGLTYVQVQK 91 (186)
T ss_dssp CHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999999998754 99999999999999999885
Q ss_pred ------HHHHHHHHHhcCchhhHHHHHhhhc
Q 031846 66 ------LYQKSLEVAAKAPELHMEIHKHGLG 90 (152)
Q Consensus 66 ------~YrkaLe~~~kapel~~e~~~~~~~ 90 (152)
.|+++++..+..++.+..+......
T Consensus 92 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 122 (186)
T 3as5_A 92 YDLAVPLLIKVAEANPINFNVRFRLGVALDN 122 (186)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH
Confidence 2555555555566666655554443
No 100
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.74 E-value=2.1e-08 Score=66.27 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhcCCCC-------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNR-------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~-------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaL 71 (152)
.+++|+..|+++++++|++ ..++++||.+|...| ++++|+++|+++++++|+ ......+
T Consensus 53 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~~~~~~~~-~~~~~~l 118 (131)
T 1elr_A 53 DYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEE-----------KYKDAIHFYNKSLAEHRT-PDVLKKC 118 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCCC-HHHHHHH
T ss_pred cHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHhCCC-HHHHHHH
Confidence 4789999999999999988 999999999999764 999999999999999994 5444444
No 101
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.74 E-value=3.7e-08 Score=74.87 Aligned_cols=52 Identities=12% Similarity=0.018 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++.+++++||.+|... +++++|+.+|++|++++|++
T Consensus 107 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~a~~~~~~~ 158 (330)
T 3hym_B 107 NEHARRYLSKATTLEKTYGPAWIAYGHSFAVE-----------SEHDQAMAAYFTAAQLMKGC 158 (330)
T ss_dssp HHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhcccc
Confidence 56677777777777777777777777777654 37777777777777777765
No 102
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.74 E-value=1.5e-08 Score=84.84 Aligned_cols=76 Identities=21% Similarity=0.229 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHh----------------cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALM----------------VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~----------------idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|++||+ ++|.+..+|+|||.+|..++ +|++|+++|++||+++|+|
T Consensus 238 ~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g-----------~~~~A~~~~~~al~~~p~~ 306 (370)
T 1ihg_A 238 NWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMS-----------DWQGAVDSCLEALEIDPSN 306 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCTTC
T ss_pred CHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhcc-----------CHHHHHHHHHHHHHhCchh
Confidence 47899999999999 89999999999999999865 9999999999999999998
Q ss_pred H---------------------HHHHHHHHHhcCchhhHHHHHh
Q 031846 65 E---------------------LYQKSLEVAAKAPELHMEIHKH 87 (152)
Q Consensus 65 e---------------------~YrkaLe~~~kapel~~e~~~~ 87 (152)
. .|++++++.+..++++.++.+-
T Consensus 307 ~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 307 TKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKV 350 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 5 3566666666666666555543
No 103
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.73 E-value=2e-08 Score=64.87 Aligned_cols=53 Identities=13% Similarity=-0.023 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhcCCC--ChHHHHHhHHHHHhc-ccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPN--RHDTLWCLGNAHTSH-AFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~--~~dA~~nLGnAy~~~-g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|+ +.+++++||.+|..+ | ++++|+++|+++++.+|++
T Consensus 55 ~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 55 RYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEG-----------KEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSS-----------CSHHHHHHHHHHGGGCCCC
T ss_pred CHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhC-----------CHHHHHHHHHHHhhcccCC
Confidence 378999999999999999 999999999999986 6 9999999999999999976
No 104
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.73 E-value=4.7e-08 Score=76.09 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHhcCCC--ChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH--------------
Q 031846 2 ILDAISKLEEALMVSPN--RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~--~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne-------------- 65 (152)
+++|+..|+++++++|+ +..++++||.+|...| ++++|+.+|+++++++|++.
T Consensus 197 ~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g 265 (368)
T 1fch_A 197 FLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSG-----------EYDKAVDCFTAALSVRPNDYLLWNKLGATLANGN 265 (368)
T ss_dssp HHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcC
Confidence 68999999999999999 8999999999999764 99999999999999999985
Q ss_pred -------HHHHHHHHHhcCchhhHHHHHhhhcc
Q 031846 66 -------LYQKSLEVAAKAPELHMEIHKHGLGQ 91 (152)
Q Consensus 66 -------~YrkaLe~~~kapel~~e~~~~~~~q 91 (152)
.|++++++.+..++.+..+..-...+
T Consensus 266 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 298 (368)
T 1fch_A 266 QSEEAVAAYRRALELQPGYIRSRYNLGISCINL 298 (368)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 36666666666677777666654433
No 105
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.72 E-value=5.2e-08 Score=72.61 Aligned_cols=54 Identities=13% Similarity=0.033 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.+++++||.+|...| ++++|+.+|+++++++|++.
T Consensus 92 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 92 NFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGG-----------RDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHhCCCCh
Confidence 4789999999999999999999999999999764 99999999999999999997
No 106
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.72 E-value=4.5e-08 Score=73.33 Aligned_cols=80 Identities=10% Similarity=-0.024 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++++++|++.+++++||.+|...| ++++|+++|+++++ .|++.
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~ 85 (272)
T 3u4t_A 18 NYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELA-----------KYDLAQKDIETYFS-KVNATKAKSADFEYYGKILM 85 (272)
T ss_dssp CHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTT-----------CHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998754 88888888888888 44331
Q ss_pred ----------HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 ----------LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 ----------~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|++++++.+..++.+..+......+|
T Consensus 86 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 122 (272)
T 3u4t_A 86 KKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKG 122 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT
T ss_pred HcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcc
Confidence 355666666666666666666554333
No 107
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.71 E-value=3.1e-08 Score=75.54 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHhcCCCC---hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~---~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+.+|++ .+++++||.+|...| +|++|+.+|+++++++|+++
T Consensus 30 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~-----------~~~~A~~~~~~~l~~~p~~~ 86 (261)
T 3qky_A 30 KYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNK-----------EYLLAASEYERFIQIYQIDP 86 (261)
T ss_dssp CHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCT
T ss_pred CHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhC-----------cHHHHHHHHHHHHHHCCCCc
Confidence 4789999999999999999 999999999999864 99999999999999999763
No 108
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.71 E-value=2.3e-08 Score=75.72 Aligned_cols=54 Identities=19% Similarity=0.035 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHhcCCCCh---HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~---dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++.+|++. +++++||.+|...| ++++|+++|+++++++|+++
T Consensus 19 ~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~-----------~~~~A~~~~~~~l~~~P~~~ 75 (225)
T 2yhc_A 19 NWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNA-----------DLPLAQAAIDRFIRLNPTHP 75 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCT
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHHHCcCCC
Confidence 47899999999999999874 79999999999865 99999999999999999985
No 109
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.70 E-value=4.1e-08 Score=72.02 Aligned_cols=62 Identities=15% Similarity=0.080 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC------CCcHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE------PSNELYQKSLEV 73 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld------P~Ne~YrkaLe~ 73 (152)
.+++|+..|+++++++|++.+++++||.+|..+| ++++|+++|++|++++ |+|...+..|..
T Consensus 188 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 188 SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK-----------EYASALETLDAARTKDAEVNNGSSAREIDQLYYK 255 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHH
Confidence 3789999999999999999999999999999865 9999999999999999 888776666543
No 110
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.70 E-value=9.4e-09 Score=81.58 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|++||+++|++..++++||.+|..+| ++++|+.+|++|++++|+|
T Consensus 53 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSVKAHFFLGQCQLEME-----------SYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCccc
Confidence 3789999999999999999999999999999765 9999999999999999987
No 111
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.70 E-value=5.9e-08 Score=70.77 Aligned_cols=65 Identities=20% Similarity=0.171 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHHhcCCCCh----------------HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMVSPNRH----------------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~----------------dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|++. +++++||.+|..+| ++++|+++|++|++++|++
T Consensus 86 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 86 KYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKE-----------EWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCCSG
T ss_pred cHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHcCccc
Confidence 37899999999999999887 99999999999865 9999999999999999976
Q ss_pred --HHHHHHHHHHhc
Q 031846 65 --ELYQKSLEVAAK 76 (152)
Q Consensus 65 --e~YrkaLe~~~k 76 (152)
..+.++++...+
T Consensus 155 ~~~~~~~a~~~~~~ 168 (213)
T 1hh8_A 155 RHSKIDKAMECVWK 168 (213)
T ss_dssp GGGHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHh
Confidence 345555555443
No 112
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.69 E-value=8.8e-08 Score=72.67 Aligned_cols=53 Identities=19% Similarity=0.179 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.++++++|.+|...| ++++|+.+|+++++++|++.
T Consensus 188 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~~~~~~~ 240 (327)
T 3cv0_A 188 YDSAAANLRRAVELRPDDAQLWNKLGATLANGN-----------RPQEALDAYNRALDINPGYV 240 (327)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHcCCCCH
Confidence 455555555555555555555555555555432 66666666666666666553
No 113
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.68 E-value=1.6e-08 Score=82.81 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHhcCCCCh-----------------HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALMVSPNRH-----------------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~-----------------dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++||+++|++. .+|+|||.+|..+| +|++|+.+|++||+++|+
T Consensus 194 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g-----------~~~~A~~~~~~al~~~p~ 262 (338)
T 2if4_A 194 KLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLK-----------RYDEAIGHCNIVLTEEEK 262 (338)
T ss_dssp CCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTT-----------CCHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCC
Confidence 36899999999999999987 49999999999865 999999999999999999
Q ss_pred cHH--------------HHHHHHHHhcCchhhHH
Q 031846 64 NEL--------------YQKSLEVAAKAPELHME 83 (152)
Q Consensus 64 Ne~--------------YrkaLe~~~kapel~~e 83 (152)
|.. |.++++.+.++.++.+.
T Consensus 263 ~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~ 296 (338)
T 2if4_A 263 NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPD 296 (338)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 962 55666666666655543
No 114
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.68 E-value=2.9e-08 Score=72.71 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++..+++++|.+|... +++++|+++|+++++++|++.
T Consensus 140 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 193 (243)
T 2q7f_A 140 QPKLALPYLQRAVELNENDTEARFQFGMCLANE-----------GMLDEALSQFAAVTEQDPGHA 193 (243)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCCHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCcccH
Confidence 367888889999988898888888888888865 488888888888888888875
No 115
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.68 E-value=4.1e-08 Score=74.96 Aligned_cols=54 Identities=11% Similarity=0.068 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.++++++|.+|...| ++++|+.+|+++++++|++.
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~ 71 (359)
T 3ieg_A 18 QLADALSQFHAAVDGDPDNYIAYYRRATVFLAMG-----------KSKAALPDLTKVIALKMDFT 71 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHhCCCcc
Confidence 3689999999999999999999999999998754 89999999999999999885
No 116
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.68 E-value=1.3e-07 Score=71.85 Aligned_cols=54 Identities=17% Similarity=0.111 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++..++++||.+|...| ++++|+++|+++++++|++.
T Consensus 140 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~al~~~~~~~ 193 (330)
T 3hym_B 140 EHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTN-----------NSKLAERFFSQALSIAPEDP 193 (330)
T ss_dssp CHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCTTCH
T ss_pred CHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHhCCCCh
Confidence 3689999999999999999999999999998754 89999999999999999985
No 117
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.67 E-value=5.3e-08 Score=70.92 Aligned_cols=50 Identities=12% Similarity=0.110 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 4 DAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 4 eAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+|+..|+++|+++|++.+++++||.+|...| ++++|+.+|+++++++|++
T Consensus 92 ~a~~~~~~al~~~P~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 92 PELKRLEQELAANPDNFELACELAVQYNQVG-----------RDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCTTT
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHhCccc
Confidence 5799999999999999999999999999765 9999999999999999975
No 118
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.67 E-value=9.6e-08 Score=75.55 Aligned_cols=80 Identities=10% Similarity=0.063 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHhcCCCChH-HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 2 ILDAISKLEEALMVSPNRHD-TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~d-A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
+++|+..|+++|+++|++.+ +|.++|+++..+ +++++|..+|++|++++|.+.
T Consensus 115 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-----------~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~ 183 (308)
T 2ond_A 115 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA-----------EGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK 183 (308)
T ss_dssp HHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHH-----------HCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhccccCccHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 45566666666666666655 566666665543 478888888888888888541
Q ss_pred -------HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 -------LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -------~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|+++++..+..++++..+......+|
T Consensus 184 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g 217 (308)
T 2ond_A 184 DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLN 217 (308)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC
Confidence 466677777777888877777665544
No 119
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.66 E-value=1e-07 Score=76.39 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..++++||.+|..+| ++++|+.+|+++++++|++.
T Consensus 76 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 76 SKAALPDLTKVIQLKMDFTAARLQRGHLLLKQG-----------KLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCCh
Confidence 567777777777777777777777777777644 77788888888888888765
No 120
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.65 E-value=1.5e-07 Score=71.43 Aligned_cols=79 Identities=16% Similarity=0.231 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++++++|++..++++||.+|...| ++++|+++|+++++++|++.
T Consensus 154 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 222 (327)
T 3cv0_A 154 YRECRTLLHAALEMNPNDAQLHASLGVLYNLSN-----------NYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRP 222 (327)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Confidence 589999999999999999999999999999764 99999999999999999985
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhhcc
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQ 91 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~~q 91 (152)
.|++++++.+..++.+..+......+
T Consensus 223 ~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 253 (327)
T 3cv0_A 223 QEALDAYNRALDINPGYVRVMYNMAVSYSNM 253 (327)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 35566666666667676666654433
No 121
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.65 E-value=1.1e-07 Score=65.88 Aligned_cols=65 Identities=17% Similarity=0.109 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHhcC-------CCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVS-------PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 1 mieeAIs~leeAL~id-------P~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~ 73 (152)
.|+.|+.-|++||+.. +...+.+.+||.+|.++| ++++|+.+|++|++++|+|+....++..
T Consensus 20 ~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g-----------~~~~A~~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 20 DYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQG-----------DLDKALLLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHhcCCCCHHHHhhHHH
Confidence 3789999999999853 457889999999999875 9999999999999999999988777765
Q ss_pred Hhc
Q 031846 74 AAK 76 (152)
Q Consensus 74 ~~k 76 (152)
.++
T Consensus 89 ~~~ 91 (104)
T 2v5f_A 89 FEY 91 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 122
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.64 E-value=9.3e-08 Score=62.60 Aligned_cols=55 Identities=25% Similarity=0.422 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++++++|++..+++++|.++...| ++++|+.+|+++++++|++..
T Consensus 50 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~~ 104 (136)
T 2fo7_A 50 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG-----------DYDEAIEYYQKALELDPRSAE 104 (136)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCChH
Confidence 3689999999999999999999999999998754 999999999999999998863
No 123
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.64 E-value=5.4e-08 Score=83.82 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQ 68 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~Yr 68 (152)
.+++|+..|++||+++|++..++++||.+|..+| ++++|+++|++|++++|++....
T Consensus 55 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g-----------~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 55 CYGYALGDATRAIELDKKYIKGYYRRAASNMALG-----------KFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHSTTCTTHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCHHHH
Confidence 4789999999999999999999999999999754 99999999999999999986433
No 124
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.63 E-value=4.6e-08 Score=66.16 Aligned_cols=40 Identities=23% Similarity=0.370 Sum_probs=34.9
Q ss_pred cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 15 VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 15 idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.||++.+++++||.+|...| ++++|+++|++|++++|++.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 41 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHD-----------NASRALALFEELVETDPDYV 41 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCT
T ss_pred CCccCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcH
Confidence 58999999999999999765 99999999999999999985
No 125
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.63 E-value=6.8e-08 Score=73.66 Aligned_cols=74 Identities=16% Similarity=0.151 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHhcCCC---ChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHh
Q 031846 1 MILDAISKLEEALMVSPN---RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAA 75 (152)
Q Consensus 1 mieeAIs~leeAL~idP~---~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~ 75 (152)
.+++|+..|+++|+++|+ ..+++++||.+|..+|.. .......+++++|+.+|+++++++|+++.+++++.+..
T Consensus 163 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~-~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~ 239 (261)
T 3qky_A 163 LYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQ-SVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYT 239 (261)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHT-SCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhccc-chhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHH
Confidence 378999999999999999 567999999999876421 00011247999999999999999999988888776654
No 126
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.63 E-value=1e-07 Score=76.30 Aligned_cols=59 Identities=20% Similarity=0.082 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHH-HHHHHHHHHHHcCCCcHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFN-KATLYFQQAVDEEPSNELYQKS 70 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~e-kA~~~FqkAleldP~Ne~Yrka 70 (152)
.+++|+..|+++|+++|++.++++|||.++..+| +++ .|.++|+++++++|+|+..+..
T Consensus 215 ~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g-----------~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 215 RWEAAEGVLQEALDKDSGHPETLINLVVLSQHLG-----------KPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 4789999999999999999999999999999876 555 4679999999999999865443
No 127
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.63 E-value=1.1e-07 Score=76.18 Aligned_cols=55 Identities=16% Similarity=0.256 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHH
Q 031846 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQ 68 (152)
Q Consensus 3 eeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~Yr 68 (152)
++|+..|+++++++|++.++|++||.+|..+| ++++|+.+|++|++++|+|....
T Consensus 312 ~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 312 VEAIRVCSEVLQMEPDNVNALKDRAEAYLIEE-----------MYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCcchHHHH
Confidence 44444444444444444444444444444332 44555555555555555444333
No 128
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.62 E-value=7.7e-08 Score=81.97 Aligned_cols=54 Identities=20% Similarity=0.135 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHhcCC---CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 2 ILDAISKLEEALMVSP---NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 2 ieeAIs~leeAL~idP---~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+++|+..|++|++++| ++.++|++||.+|..+| ++++|+++|++|++++|++..
T Consensus 237 ~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~p~~~~ 293 (474)
T 4abn_A 237 SQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEE-----------SYGEALEGFSQAAALDPAWPE 293 (474)
T ss_dssp HHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCHH
Confidence 7899999999999999 99999999999999765 999999999999999999974
No 129
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.62 E-value=1.9e-07 Score=69.32 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..++++||.+|...| ++++|+.+|+++++++|++.
T Consensus 157 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~~~~~~~~~~ 209 (252)
T 2ho1_A 157 PAQAKEYFEKSLRLNRNQPSVALEMADLLYKER-----------EYVPARQYYDLFAQGGGQNA 209 (252)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTSCCCH
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCcCcH
Confidence 466666666666666666666666666666543 66777777777777777664
No 130
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.61 E-value=1.7e-07 Score=69.64 Aligned_cols=52 Identities=15% Similarity=0.054 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHH--cCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD--EEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAle--ldP~N 64 (152)
+++|+..|+++++++|++..++++||.+|...| ++++|+++|+++++ .+|++
T Consensus 87 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~~~~~~~~~~~ 140 (252)
T 2ho1_A 87 PKLADEEYRKALASDSRNARVLNNYGGFLYEQK-----------RYEEAYQRLLEASQDTLYPER 140 (252)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHTTCTTCTTH
T ss_pred HHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHh-----------HHHHHHHHHHHHHhCccCccc
Confidence 466666666666666666666666666666543 77777777777777 66655
No 131
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.61 E-value=9.3e-08 Score=85.46 Aligned_cols=80 Identities=9% Similarity=-0.044 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHH--------hcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH--------
Q 031846 2 ILDAISKLEEAL--------MVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-------- 65 (152)
Q Consensus 2 ieeAIs~leeAL--------~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne-------- 65 (152)
+++|+..|++++ +++|++.++++++|.+|..+| ++++|+++|++|++++|+|.
T Consensus 407 ~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~a~~~lg~ 475 (681)
T 2pzi_A 407 PVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLG-----------DVAKATRKLDDLAERVGWRWRLVWYRAV 475 (681)
T ss_dssp HHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcC-----------CHHHHHHHHHHHhccCcchHHHHHHHHH
Confidence 689999999999 999999999999999999754 99999999999999999994
Q ss_pred -------------HHHHHHHHHhcCchhhHHHHHhhhccC
Q 031846 66 -------------LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -------------~YrkaLe~~~kapel~~e~~~~~~~q~ 92 (152)
.|++++++.+..++.+..+..-...+|
T Consensus 476 ~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g 515 (681)
T 2pzi_A 476 AELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAG 515 (681)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC
Confidence 478888888888888888888766555
No 132
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.60 E-value=1.8e-07 Score=67.27 Aligned_cols=55 Identities=20% Similarity=0.168 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++++++|++.+++++||.+|...| ++++|+++|+++++++|++..
T Consensus 23 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~~~~~~~~ 77 (225)
T 2vq2_A 23 DYRQATASIEDALKSDPKNELAWLVRAEIYQYLK-----------VNDKAQESFRQALSIKPDSAE 77 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC-----------ChHHHHHHHHHHHHhCCCChH
Confidence 4789999999999999999999999999998754 999999999999999998863
No 133
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.58 E-value=3e-07 Score=66.05 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhc-ccCCCChHHHHHhHHHHHHHHHHHHH--cCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSH-AFLTPDQDEAKEYFNKATLYFQQAVD--EEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~-g~l~pd~~eA~~~~ekA~~~FqkAle--ldP~N 64 (152)
+++|+..|+++++++|++..+++++|.+|... | ++++|+.+|+++++ .+|++
T Consensus 58 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~~ 112 (225)
T 2vq2_A 58 NDKAQESFRQALSIKPDSAEINNNYGWFLCGRLN-----------RPAESMAYFDKALADPTYPTP 112 (225)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC-----------CHHHHHHHHHHHHTSTTCSCH
T ss_pred hHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcC-----------cHHHHHHHHHHHHcCcCCcch
Confidence 57888888888888888888888888888765 4 77888888888887 45544
No 134
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.58 E-value=1e-07 Score=75.60 Aligned_cols=57 Identities=9% Similarity=0.015 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc--HHHHHH
Q 031846 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN--ELYQKS 70 (152)
Q Consensus 3 eeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N--e~Yrka 70 (152)
++|+..|+++++++|++.+++++||.+|...| ++++|+++|+++++++|++ ...+..
T Consensus 202 ~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g-----------~~~~A~~~l~~~l~~~p~~~~~~a~~~ 260 (287)
T 3qou_A 202 TPEIQQLQQQVAENPEDAALATQLALQLHQVG-----------RNEEALELLFGHLRXDLTAADGQTRXT 260 (287)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTGGGGHHHHH
T ss_pred CccHHHHHHHHhcCCccHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHhcccccccchHHHH
Confidence 56899999999999999999999999999765 9999999999999999998 444433
No 135
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.57 E-value=2.6e-07 Score=75.60 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++++++|++.++++++|.+|...| ++++|+++|+++++++|++.
T Consensus 292 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~ 360 (537)
T 3fp2_A 292 SQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQ-----------DYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKF 360 (537)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 578888888888888888888888888887654 88888888888888888763
Q ss_pred -----HHHHHHHHHhcCchhhHHHHHhhhcc
Q 031846 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQ 91 (152)
Q Consensus 66 -----~YrkaLe~~~kapel~~e~~~~~~~q 91 (152)
.|+++++..+..++++..+......+
T Consensus 361 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 391 (537)
T 3fp2_A 361 TESEAFFNETKLKFPTLPEVPTFFAEILTDR 391 (537)
T ss_dssp HHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Confidence 35566666666666666666555433
No 136
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.56 E-value=8.7e-08 Score=78.38 Aligned_cols=54 Identities=17% Similarity=0.189 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+++|+..|+++|+++|++.+++++||.+|..+| ++++|+++|+++++++|+|..
T Consensus 41 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~ 94 (537)
T 3fp2_A 41 FNEAIKYYQYAIELDPNEPVFYSNISACYISTG-----------DLEKVIEFTTKALEIKPDHSK 94 (537)
T ss_dssp CC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCchHH
Confidence 679999999999999999999999999999754 999999999999999999963
No 137
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.56 E-value=7.4e-08 Score=76.03 Aligned_cols=73 Identities=10% Similarity=0.010 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH--------
Q 031846 1 MILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------- 66 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~-------- 66 (152)
.+++|+..|++||+++|+. .+++.+||.+|..+| +|++|+++|++|++++|++..
T Consensus 133 ~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 201 (292)
T 1qqe_A 133 DYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDG-----------QYIEASDIYSKLIKSSMGNRLSQWSLKDY 201 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTTSSCTTTGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence 3789999999999999875 578999999999865 999999999999999998631
Q ss_pred -------------HHHHHHHHhcCchhhHHH
Q 031846 67 -------------YQKSLEVAAKAPELHMEI 84 (152)
Q Consensus 67 -------------YrkaLe~~~kapel~~e~ 84 (152)
|..+++.+.++.++.+.+
T Consensus 202 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 202 FLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 445556666666665554
No 138
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.55 E-value=2.1e-07 Score=77.53 Aligned_cols=61 Identities=16% Similarity=0.160 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe 72 (152)
.+++|+..|+++++++|++..+|+.||++|...| ++++|+++|+++++++|+|......|.
T Consensus 531 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~~l~~~p~~~~~~~~l~ 591 (597)
T 2xpi_A 531 MYDAAIDALNQGLLLSTNDANVHTAIALVYLHKK-----------IPGLAITHLHESLAISPNEIMASDLLK 591 (597)
T ss_dssp CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 4789999999999999999999999999999865 999999999999999999987666654
No 139
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.53 E-value=1.6e-07 Score=74.04 Aligned_cols=54 Identities=13% Similarity=0.056 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHhcCCCChH-------HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHD-------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~d-------A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.. +|+++|.+|..+| ++++|+.+|++|++++|++.
T Consensus 173 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 173 QYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAAT-----------DAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp CHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTT-----------CHHHHHHHHHGGGCC-----
T ss_pred CHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhCCCCC
Confidence 478999999999999998765 6899999999764 99999999999999999864
No 140
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.52 E-value=2.7e-07 Score=72.94 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHh-cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALM-VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~-idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|++||+ ++|++..+|.++|.++..+| ++++|.++|++|++++|++.
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 133 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRM-----------KYEKVHSIYNRLLAIEDIDP 133 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTSSSSCT
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHhccccCc
Confidence 4899999999999 79999999999999998764 99999999999999999874
No 141
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.46 E-value=3.9e-07 Score=73.65 Aligned_cols=53 Identities=19% Similarity=0.053 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++| +..++++||.+|...| ++++|+.+|+++++++|++.
T Consensus 21 ~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 73 (514)
T 2gw1_A 21 KYDDAIKYYNWALELKE-DPVFYSNLSACYVSVG-----------DLKKVVEMSTKALELKPDYS 73 (514)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHCSCCH
T ss_pred cHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHh-----------hHHHHHHHHHHHhccChHHH
Confidence 36889999999999998 5889999999998754 89999999999999999885
No 142
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.45 E-value=5.5e-07 Score=72.76 Aligned_cols=61 Identities=16% Similarity=0.234 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~ 73 (152)
+++|+..|+++++++|++.+++++||.+|...| ++++|+++|++|++++|+++....++..
T Consensus 431 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 491 (514)
T 2gw1_A 431 FIEATNLLEKASKLDPRSEQAKIGLAQMKLQQE-----------DIDEAITLFEESADLARTMEEKLQAITF 491 (514)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 689999999999999999999999999999765 9999999999999999999876665533
No 143
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.44 E-value=8.2e-07 Score=73.99 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++.++|++||.+|...| ++++|+++|+++++++|++
T Consensus 389 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~~~~~~~~~ 440 (597)
T 2xpi_A 389 ISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEG-----------EHDQAISAYTTAARLFQGT 440 (597)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCccc
Confidence 567777777777777777777777777777643 7777777777777777765
No 144
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.39 E-value=7.3e-07 Score=67.41 Aligned_cols=67 Identities=12% Similarity=0.128 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHhcCCCChH---HHHHhHHHHHhcccC-------CCChHHHHHhHHHHHHHHHHHHHcCCCcHHH
Q 031846 1 MILDAISKLEEALMVSPNRHD---TLWCLGNAHTSHAFL-------TPDQDEAKEYFNKATLYFQQAVDEEPSNELY 67 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~d---A~~nLGnAy~~~g~l-------~pd~~eA~~~~ekA~~~FqkAleldP~Ne~Y 67 (152)
.+++|+..|+++++++|++.. |+|++|.+|...+.. ..+.....+++++|+.+|+++++.+|++...
T Consensus 56 ~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a 132 (225)
T 2yhc_A 56 DLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYT 132 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTH
T ss_pred CHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhH
Confidence 378999999999999999875 899999999753200 0000011369999999999999999998643
No 145
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.32 E-value=2.3e-06 Score=66.96 Aligned_cols=70 Identities=23% Similarity=0.197 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHH---HcCCCcH------
Q 031846 1 MILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAV---DEEPSNE------ 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAl---eldP~Ne------ 65 (152)
.+++|+..|++||++.++. ..++++||++|..+| +|++|+++|++|+ +..|++.
T Consensus 130 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~-----------~~~~A~~~~~kal~~~~~~~~~~~~~~~~ 198 (293)
T 2qfc_A 130 DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENG-----------YLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp CHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHhcCccccchHHH
Confidence 3689999999999887665 679999999999864 9999999999999 6677653
Q ss_pred ------------HHHHHHHHHhcCchhh
Q 031846 66 ------------LYQKSLEVAAKAPELH 81 (152)
Q Consensus 66 ------------~YrkaLe~~~kapel~ 81 (152)
.|.+|++.+.++.++.
T Consensus 199 ~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 199 RYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 2566666666665554
No 146
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.28 E-value=1.5e-06 Score=55.03 Aligned_cols=40 Identities=30% Similarity=0.596 Sum_probs=33.3
Q ss_pred cCC-CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 15 VSP-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 15 idP-~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+|| .+.+++++||.+|... +++++|+.+|++|++++|++.
T Consensus 3 ~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~ 43 (91)
T 1na3_A 3 MDPGNSAEAWYNLGNAYYKQ-----------GDYDEAIEYYQKALELDPNNA 43 (91)
T ss_dssp ---CHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred CcccccHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHhcCCCCH
Confidence 344 4678999999999875 499999999999999999985
No 147
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.27 E-value=7.6e-07 Score=65.65 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHhc--------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc--------CCCc
Q 031846 1 MILDAISKLEEALMV--------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE--------EPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~i--------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel--------dP~N 64 (152)
.+++|+..|++++++ +|....++++||.+|..+| ++++|+++|++|+++ +|.+
T Consensus 100 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~~~~~~~~~~ 168 (283)
T 3edt_B 100 KYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQG-----------KAEEVEYYYRRALEIYATRLGPDDPNV 168 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 378999999999998 6888999999999999865 999999999999999 5544
Q ss_pred H--------------HHHHHHHHHhcCchhhHH
Q 031846 65 E--------------LYQKSLEVAAKAPELHME 83 (152)
Q Consensus 65 e--------------~YrkaLe~~~kapel~~e 83 (152)
. .|.++++...++.++..+
T Consensus 169 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 169 AKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3 255566666666655433
No 148
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.19 E-value=4.9e-06 Score=65.03 Aligned_cols=48 Identities=19% Similarity=0.158 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHHhcCCCChH------HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHD------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~d------A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAle 59 (152)
.+++|+..|++||++.++..+ ++.+||++|..+| +|++|+++|++|++
T Consensus 130 ~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-----------~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 130 DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENG-----------YLKKGIDLFEQILK 183 (293)
T ss_dssp CHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHH
Confidence 368999999999998776555 7999999999865 99999999999995
No 149
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.18 E-value=1.5e-06 Score=64.13 Aligned_cols=49 Identities=20% Similarity=0.204 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHhc--------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 1 MILDAISKLEEALMV--------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~leeAL~i--------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|++++++ +|....++++||.+|..+| ++++|+++|++|+++
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 58 KYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG-----------KYKEAEPLCKRALEI 114 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHH
Confidence 378999999999988 5778889999999999865 899999999999998
No 150
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.16 E-value=2.8e-06 Score=67.40 Aligned_cols=49 Identities=18% Similarity=0.159 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHhcCCCCh----HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 1 MILDAISKLEEALMVSPNRH----DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~----dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|+++|+++|++. .++++||.+|...| ++++|+++|++|+++
T Consensus 63 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~ 115 (411)
T 4a1s_A 63 DCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLG-----------DYNKAMQYHKHDLTL 115 (411)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHH
Confidence 47899999999999999987 58999999999754 999999999999988
No 151
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.15 E-value=3.5e-06 Score=62.98 Aligned_cols=49 Identities=22% Similarity=0.155 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHhcCCCC----hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 1 MILDAISKLEEALMVSPNR----HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~----~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|+++++++|++ ..++++||.+|...| ++++|+++|++|+++
T Consensus 20 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 20 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH-----------DYAKALEYHHHDLTL 72 (338)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHH
Confidence 4789999999999999998 478999999999765 999999999999888
No 152
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.14 E-value=2.6e-06 Score=55.65 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=32.8
Q ss_pred ChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 19 RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 19 ~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+.++++++|+++...| +|++|+++|++|++++|++.
T Consensus 3 ~~~~~~~~g~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 38 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQG-----------LYREAVHCYDQLITAQPQNP 38 (111)
T ss_dssp HHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCCH
Confidence 4688999999999764 99999999999999999985
No 153
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.13 E-value=5.5e-07 Score=60.68 Aligned_cols=52 Identities=21% Similarity=0.212 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHhcCCCCh------HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALMVSPNRH------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~------dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++++++.++.. .++++||.+|..+| ++++|+++|++|+++.++
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 24 NFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLG-----------EFETASEYYKKTLLLARQ 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHH
Confidence 37899999999999987755 48999999999765 999999999999988664
No 154
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.12 E-value=3.1e-06 Score=67.89 Aligned_cols=70 Identities=26% Similarity=0.360 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHhcCCCCh------HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHH-----cC-CCcH---
Q 031846 1 MILDAISKLEEALMVSPNRH------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD-----EE-PSNE--- 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~------dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAle-----ld-P~Ne--- 65 (152)
.+++|+..|++||++.++.. .++++||.+|..+| ++++|+++|++|++ .+ |.+.
T Consensus 199 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-----------~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 267 (383)
T 3ulq_A 199 QYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQS-----------QYEDAIPYFKRAIAVFEESNILPSLPQAY 267 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 37899999999999977665 49999999999865 99999999999999 45 5442
Q ss_pred -----------HHHHHHHHHhcCchhh
Q 031846 66 -----------LYQKSLEVAAKAPELH 81 (152)
Q Consensus 66 -----------~YrkaLe~~~kapel~ 81 (152)
.|.++++...++.++.
T Consensus 268 ~~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 268 FLITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 2555666666665554
No 155
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.11 E-value=5e-06 Score=62.73 Aligned_cols=64 Identities=23% Similarity=0.280 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHhcC-C-CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhc
Q 031846 2 ILDAISKLEEALMVS-P-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAK 76 (152)
Q Consensus 2 ieeAIs~leeAL~id-P-~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~k 76 (152)
+.++|..|++.++.+ | ..-+.+|.|+.+++++| +|++|..|++..|+++|+|...+...++.++
T Consensus 54 ~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg-----------~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 54 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK-----------EYEKALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 467999999999988 6 68899999999999975 9999999999999999999988877776654
No 156
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.11 E-value=4.7e-06 Score=64.99 Aligned_cols=50 Identities=22% Similarity=0.152 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHhcCCCC----hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC
Q 031846 1 MILDAISKLEEALMVSPNR----HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~----~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld 61 (152)
.+++|+..|+++|+++|++ ..++++||.+|...| ++++|+.+|++|+++.
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 24 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH-----------DYAKALEYHHHDLTLA 77 (406)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHH
Confidence 3789999999999999998 468999999999765 9999999999998883
No 157
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.09 E-value=8.9e-07 Score=69.30 Aligned_cols=75 Identities=9% Similarity=0.005 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHh-------cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH--------
Q 031846 1 MILDAISKLEEALM-------VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-------- 65 (152)
Q Consensus 1 mieeAIs~leeAL~-------idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne-------- 65 (152)
.+++|+..|++||+ .++....+++|||.+|..+| +|++|+++|++|+++.+++.
T Consensus 170 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~-----------~y~~A~~~~~~al~~~~~~~~~~~~~~~ 238 (293)
T 3u3w_A 170 YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS-----------RYEESLYQVNKAIEISCRINSMALIGQL 238 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHTTBCTTHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHh-----------HHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 37899999999994 33445568999999999865 99999999999999987541
Q ss_pred -------------HHHHHHHHHhcCchhhHHHHH
Q 031846 66 -------------LYQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 66 -------------~YrkaLe~~~kapel~~e~~~ 86 (152)
.|.++++...+|.++...+..
T Consensus 239 ~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~~ 272 (293)
T 3u3w_A 239 YYQRGECLRKLEYEEAEIEDAYKKASFFFDILEM 272 (293)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCC
Confidence 146666666666666655444
No 158
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.08 E-value=5.4e-06 Score=73.70 Aligned_cols=80 Identities=11% Similarity=0.135 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
.+||+..++++|++||++..||++.|.++..++. ..+.++....+++|+++|++|++++|+|.
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~-~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~ 123 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQHLET-EKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP 123 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHhccc-ccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccc
Confidence 4789999999999999999999999999998752 11223333458888888888888888885
Q ss_pred HHHHHHHHHhcCchhhH
Q 031846 66 LYQKSLEVAAKAPELHM 82 (152)
Q Consensus 66 ~YrkaLe~~~kapel~~ 82 (152)
.|.++++...++.++++
T Consensus 124 ~~~~el~~~~k~l~~d~ 140 (567)
T 1dce_A 124 NWARELELCARFLEADE 140 (567)
T ss_dssp CHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHhhcc
Confidence 23566666666666543
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.08 E-value=1.9e-06 Score=67.34 Aligned_cols=52 Identities=10% Similarity=0.120 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHH---hcCCCCh----HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEAL---MVSPNRH----DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL---~idP~~~----dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++|| +..|++. .+++|||.+|..+| +|++|+++|++|+++.++
T Consensus 170 ~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~-----------~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 170 YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS-----------RYEESLYQVNKAIEISCR 228 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHh-----------hHHHHHHHHHHHHHHHHh
Confidence 3789999999999 5566643 69999999999865 999999999999998764
No 160
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.08 E-value=9.5e-06 Score=72.12 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------H
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------L 66 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------~ 66 (152)
+++|+..++++|++||++..||++.|.++..++. .++++|+++|++++++||.|- .
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~---------~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~ 159 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE---------PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 159 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSS---------CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc---------ccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCC
Confidence 7899999999999999999999999999987652 267999999999999999985 2
Q ss_pred HHHHHHHHhcCchhhHH
Q 031846 67 YQKSLEVAAKAPELHME 83 (152)
Q Consensus 67 YrkaLe~~~kapel~~e 83 (152)
|.+.++.+.++.++++.
T Consensus 160 ~~~el~~~~~~I~~~p~ 176 (567)
T 1dce_A 160 PAEELAFTDSLITRNFS 176 (567)
T ss_dssp HHHHHHHHHTTTTTTCC
T ss_pred hHHHHHHHHHHHHHCCC
Confidence 56677778888877654
No 161
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.08 E-value=1.6e-05 Score=67.09 Aligned_cols=79 Identities=10% Similarity=0.044 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhcCCCCh-HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031846 2 ILDAISKLEEALMVSPNRH-DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~-dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
+++|+..|+++|+++|+++ .+|.++|+.+..+ +++++|..+|++|++..|.+.
T Consensus 337 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-----------~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~ 405 (530)
T 2ooe_A 337 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA-----------EGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK 405 (530)
T ss_dssp HHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCccccCchHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcC
Confidence 4556666666666666653 4555566655542 467777777777777766531
Q ss_pred -------HHHHHHHHHhcCchhhHHHHHhhhcc
Q 031846 66 -------LYQKSLEVAAKAPELHMEIHKHGLGQ 91 (152)
Q Consensus 66 -------~YrkaLe~~~kapel~~e~~~~~~~q 91 (152)
.|+++++..+..++++..+......+
T Consensus 406 ~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~ 438 (530)
T 2ooe_A 406 DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHL 438 (530)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred ChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhC
Confidence 35556666666677666666655443
No 162
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.08 E-value=3.5e-06 Score=64.16 Aligned_cols=76 Identities=16% Similarity=0.144 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHh----cccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH------HH---
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTS----HAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE------LY--- 67 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~----~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne------~Y--- 67 (152)
.+++|+..|+++++++ +.+++++||.+|.. .+ ++++|+++|++|++++|... .|
T Consensus 165 ~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~-----------~~~~A~~~~~~a~~~~~~~a~~~l~~~~~~g 231 (273)
T 1ouv_A 165 DLKKALASYDKACDLK--DSPGCFNAGNMYHHGEGATK-----------NFKEALARYSKACELENGGGCFNLGAMQYNG 231 (273)
T ss_dssp CHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTCSSCC-----------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCCc-----------cHHHHHHHHHHHHhCCCHHHHHHHHHHHHcC
Confidence 3688999999999874 57899999999988 54 88999999999999887442 22
Q ss_pred -------HHHHHHHhcCchhhHHHHHhhh
Q 031846 68 -------QKSLEVAAKAPELHMEIHKHGL 89 (152)
Q Consensus 68 -------rkaLe~~~kapel~~e~~~~~~ 89 (152)
.++++...++.++.++-....+
T Consensus 232 ~~~~~~~~~A~~~~~~a~~~~~~~a~~~l 260 (273)
T 1ouv_A 232 EGVTRNEKQAIENFKKGCKLGAKGACDIL 260 (273)
T ss_dssp SSSSCCSTTHHHHHHHHHHHTCHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3466777776666655544433
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.06 E-value=1.3e-06 Score=69.39 Aligned_cols=52 Identities=13% Similarity=0.081 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|++||++.|+. ..++.+||.+|..+| +|++|+++|++|+++.|++
T Consensus 131 ~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQ-----------KFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHHc
Confidence 678888888888887764 577888888888754 8888888888888887654
No 164
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.05 E-value=1e-05 Score=67.58 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhcC--CC-ChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031846 2 ILDAISKLEEALMVS--PN-RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 2 ieeAIs~leeAL~id--P~-~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaL 71 (152)
+++|+..|++++.-+ |. ..+++|++|.++..+| +.++|..+|+++++++|+ +....+|
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lG-----------r~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQG-----------NESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 445555555554322 33 3445555555555433 555555555555555554 4444444
No 165
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.04 E-value=1.6e-06 Score=65.19 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHhc--------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALMV--------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~i--------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++++++ +|....++++||.+|..+| ++++|+++|++++++.|+
T Consensus 168 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 168 KYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQG-----------KFKQAETLYKEILTRAHE 227 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHH
Confidence 378999999999999 8888999999999999754 999999999999987554
No 166
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.03 E-value=2e-06 Score=69.07 Aligned_cols=53 Identities=13% Similarity=0.026 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhc------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 1 MILDAISKLEEALMV------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~leeAL~i------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|++|+++ ++...+++++||.+|..+| ++++|+++|++|+++.+++
T Consensus 118 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~~~~ 176 (383)
T 3ulq_A 118 EYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMK-----------QTYFSMDYARQAYEIYKEH 176 (383)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHhC
Confidence 378999999999998 4446789999999999865 9999999999999986643
No 167
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.99 E-value=1.6e-06 Score=58.37 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC
Q 031846 1 MILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP 62 (152)
.+++|+..|++++++.++. ..++++||.+|..+| ++++|+++|++|+++.+
T Consensus 64 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 64 EFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQ-----------DYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHH
Confidence 3789999999999987765 678999999999764 99999999999998854
No 168
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.99 E-value=8.8e-06 Score=69.38 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhcCCC--ChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPN--RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~--~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
..+|...+++||+|||+ +..||.-||..|... | .-.-++.++|.++|+|||+++|++
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~v----P--p~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAA----P--ESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHS----C--TTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhC----C--CccCCCHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999 566999999999874 1 000159999999999999999975
No 169
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.95 E-value=1.6e-05 Score=69.21 Aligned_cols=57 Identities=9% Similarity=0.030 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQK 69 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~Yrk 69 (152)
.+++|+..+++||.+||+ ..+|..||.++...| ++++|++.|++|+.++|..+.|.=
T Consensus 292 d~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G-----------~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 292 KTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKG-----------MNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp CHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCcChHHH
Confidence 368999999999999975 788899999998765 999999999999999999887653
No 170
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.95 E-value=1.5e-05 Score=56.92 Aligned_cols=49 Identities=12% Similarity=0.115 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHHh------cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 1 MILDAISKLEEALM------VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~leeAL~------idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|+++++ .+|....++++||.+|...| ++++|+++|++|+++
T Consensus 41 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 41 RFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG-----------NWDAARRCFLEEREL 95 (203)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHH
Confidence 36899999999999 66777889999999999765 999999999999998
No 171
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.92 E-value=2.1e-05 Score=66.43 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHh-cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 3 LDAISKLEEALM-VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 3 eeAIs~leeAL~-idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
++|+..|++||+ ++|++..+|+++|.++...| ++++|..+|++|++++|++.
T Consensus 303 ~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 355 (530)
T 2ooe_A 303 DEAANIYERAISTLLKKNMLLYFAYADYEESRM-----------KYEKVHSIYNRLLAIEDIDP 355 (530)
T ss_dssp HHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHSSSSCH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHhCccccCc
Confidence 489999999997 89999999999999998764 99999999999999999884
No 172
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.90 E-value=7.2e-06 Score=63.94 Aligned_cols=52 Identities=23% Similarity=0.261 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhcCCCChH------HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHD------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~d------A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|++++++.|+..+ ++++||.+|...| ++++|+.+|++|+++.|++
T Consensus 203 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~~ 260 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLG-----------EFETASEYYKKTLLLARQL 260 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC-----------ChHHHHHHHHHHHHHHHhC
Confidence 67899999999988887766 8999999988754 8888888888888877654
No 173
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.90 E-value=2.4e-05 Score=59.13 Aligned_cols=52 Identities=27% Similarity=0.197 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhcCC--CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 2 ILDAISKLEEALMVSP--NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~leeAL~idP--~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
+++|+..|++|++++| ++.+|+++||.+|..-.- ...++++|+.+|++|+++
T Consensus 105 ~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g-------~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 105 VAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVH-------GPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSS-------SSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCC-------CCCCHHHHHHHHHHHHHc
Confidence 3455555555555555 235555555555543100 012555555555555555
No 174
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.89 E-value=1.8e-05 Score=59.36 Aligned_cols=50 Identities=16% Similarity=0.097 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHhc--------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC
Q 031846 1 MILDAISKLEEALMV--------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 1 mieeAIs~leeAL~i--------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld 61 (152)
.+++|+..|++++++ +|....++++||.+|...| ++++|+.+|++|+++-
T Consensus 42 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~ 99 (311)
T 3nf1_A 42 RYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN-----------KYKDAANLLNDALAIR 99 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHH
Confidence 378999999999995 7888999999999999765 8999999999999883
No 175
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.89 E-value=3.7e-05 Score=58.39 Aligned_cols=47 Identities=19% Similarity=0.218 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHh----cccCCCChHHHHHhHHHHHHHHHHHHHcC
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTS----HAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~----~g~l~pd~~eA~~~~ekA~~~FqkAleld 61 (152)
+++|+..|+++++ |++.+++++||.+|.. . +++++|+++|++|++++
T Consensus 22 ~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~-----------~~~~~A~~~~~~a~~~~ 72 (273)
T 1ouv_A 22 FTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVE-----------KNLKKAASFYAKACDLN 72 (273)
T ss_dssp HHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSC-----------CCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcC-----------CCHHHHHHHHHHHHHCC
Confidence 6788888888887 7778888888888876 4 37888888888888876
No 176
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.87 E-value=4.5e-06 Score=62.44 Aligned_cols=51 Identities=18% Similarity=0.214 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 2 ILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
+++|+..|++++++.++. ..++++||.+|..+| ++++|+.+|++|+++.|+
T Consensus 239 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 239 FETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQ-----------DYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHHHh
Confidence 577888888888777666 667778888877654 778888888888777654
No 177
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.86 E-value=1.9e-05 Score=63.54 Aligned_cols=52 Identities=15% Similarity=0.100 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~-----idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++|++ .+|....++++||.+|..+| ++++|+++|++|+++.++
T Consensus 237 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 237 DDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAG-----------QTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHH
Confidence 36788888888888 78888888888888888754 888888888888888553
No 178
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.85 E-value=6.4e-06 Score=66.29 Aligned_cols=52 Identities=15% Similarity=0.029 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHhcC------CCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALMVS------PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~id------P~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++|+++- +....++++||.+|..+| ++++|+.+|++|+++.+.
T Consensus 116 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~-----------~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 116 EYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMK-----------QTHVSMYHILQALDIYQN 173 (378)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcC-----------CcHHHHHHHHHHHHHHHh
Confidence 3789999999999873 346779999999999865 999999999999998664
No 179
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.85 E-value=3.9e-05 Score=58.68 Aligned_cols=65 Identities=12% Similarity=0.118 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhcCC-CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhcC
Q 031846 2 ILDAISKLEEALMVSP-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKA 77 (152)
Q Consensus 2 ieeAIs~leeAL~idP-~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~ka 77 (152)
+.++|..|++.++.+| ..-|.+|.|+.+++++| +|++|..|-++.|+++|+|...+...++.++.
T Consensus 59 ~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklg-----------dY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~k 124 (134)
T 3o48_A 59 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLG-----------EYSMAKRYVDTLFEHERNNKQVGALKSMVEDK 124 (134)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Confidence 4689999999999999 56899999999999875 99999999999999999999888777776554
No 180
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.82 E-value=6.9e-06 Score=58.69 Aligned_cols=51 Identities=8% Similarity=-0.025 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHhc---CC----CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC
Q 031846 1 MILDAISKLEEALMV---SP----NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~leeAL~i---dP----~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP 62 (152)
.+++|+..|++++++ .+ ....++++||.+|..+| ++++|+.+|++|+++.+
T Consensus 81 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 81 NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFG-----------DLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHHHHH
Confidence 368999999999998 44 34577999999999754 99999999999997743
No 181
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.82 E-value=1.1e-05 Score=63.86 Aligned_cols=53 Identities=9% Similarity=0.011 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHhcCCCCh------HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRH------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~------dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|++.|+.. .++.++|.++..+| ++++|+.+|++++ ++|++.
T Consensus 170 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g-----------~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 170 KFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRA-----------DYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHT-TSTTST
T ss_pred CHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHh-CCCCCC
Confidence 47899999999999987654 47888899988654 9999999999999 999764
No 182
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.81 E-value=2.4e-05 Score=65.13 Aligned_cols=57 Identities=9% Similarity=-0.031 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHH----HhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAH----TSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy----~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..++++|.+||++..+|++.|.++ ..++- ..++++++++++++++++|.|.
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~--------~~~~~~EL~~~~~~l~~~pkny 144 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNN--------DFDPYREFDILEAMLSSDPKNH 144 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTT--------CCCTHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccc--------cCCHHHHHHHHHHHHHhCCCCH
Confidence 378999999999999999999999999999 43210 1478899999999999999996
No 183
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.81 E-value=7.1e-05 Score=57.86 Aligned_cols=64 Identities=13% Similarity=0.122 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhcCC-CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhc
Q 031846 2 ILDAISKLEEALMVSP-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAK 76 (152)
Q Consensus 2 ieeAIs~leeAL~idP-~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~k 76 (152)
+.++|..|++.++.+| ..-+.+|.|+.+++++| +|++|..|.+..|+++|+|...+...++.++
T Consensus 58 i~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~-----------~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~ 122 (144)
T 1y8m_A 58 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLG-----------EYSMAKRYVDTLFEHERNNKQVGALKSMVED 122 (144)
T ss_dssp HHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 4689999999999998 57899999999999975 9999999999999999999887777666654
No 184
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.80 E-value=1.1e-05 Score=63.96 Aligned_cols=50 Identities=14% Similarity=0.128 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHhc------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC
Q 031846 1 MILDAISKLEEALMV------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 1 mieeAIs~leeAL~i------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld 61 (152)
.+++|+..|++++++ +|....++++||.+|...| ++++|+.+|++|+++.
T Consensus 101 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 101 DYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMG-----------RFDEAAICCERHLTLA 156 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHH
Confidence 368899999999988 7888899999999998765 8888999999988883
No 185
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.79 E-value=4.1e-05 Score=63.69 Aligned_cols=55 Identities=7% Similarity=-0.108 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.++|+..++++|++||++..||+..|.++..++. .++++|+++++++|.++|+|.
T Consensus 49 s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~---------~~~~eeL~~~~~~L~~nPk~y 103 (306)
T 3dra_A 49 SERALHITELGINELASHYTIWIYRFNILKNLPN---------RNLYDELDWCEEIALDNEKNY 103 (306)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTT---------SCHHHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHccc---------ccHHHHHHHHHHHHHHCcccH
Confidence 3789999999999999999999999999987641 389999999999999999985
No 186
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.78 E-value=6e-05 Score=63.89 Aligned_cols=70 Identities=9% Similarity=0.040 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHH---HHHhHHHHHHHHHHHHHcCCCcHH---HHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDE---AKEYFNKATLYFQQAVDEEPSNEL---YQKSL 71 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~e---A~~~~ekA~~~FqkAleldP~Ne~---YrkaL 71 (152)
++++++.++++|++||.+..||.++|.++..+.-..++... ..+.++++++||++||.++|+|+. |.+.+
T Consensus 161 ~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~l 236 (331)
T 3dss_A 161 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 236 (331)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 58999999999999999999999999999875211100000 126799999999999999999984 55544
No 187
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.76 E-value=3.7e-05 Score=66.82 Aligned_cols=53 Identities=8% Similarity=-0.071 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhc-----CCCCh---HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-----CCCcH
Q 031846 2 ILDAISKLEEALMV-----SPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~i-----dP~~~---dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-----dP~Ne 65 (152)
+++|+..|+++|++ -|+|. .++.|||.+|..+| +|++|+.+|+|||++ -|+|+
T Consensus 314 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g-----------~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 314 PSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQ-----------DWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhc-----------CHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 68999999999985 55554 56899999999876 889999999998865 57776
No 188
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.76 E-value=8.9e-06 Score=53.01 Aligned_cols=46 Identities=7% Similarity=0.115 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++|++.+++++ ..+++|+.+|++++.++|++.
T Consensus 50 ~~~~A~~~~~~al~~~p~~~~~~~~-------------------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 50 DWQKALNNYQSAIELNPDSPALQAR-------------------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp CHHHHHHHHHHHHHHCTTSTHHHHH-------------------HHHHHHHHHHCCTTHHHHCCS
T ss_pred CHHHHHHHHHHHHhcCCCcHHHHHH-------------------HHHHHHHHHHHHHhccCcccc
Confidence 4789999999999999999998855 278889999999999999874
No 189
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.75 E-value=5.4e-05 Score=64.15 Aligned_cols=54 Identities=7% Similarity=-0.090 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++++..++++|++||++..||++.|.++..++. .++++++|+++++++||.|.
T Consensus 126 ~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~----------~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 126 WARELELCARFLEADERNFHCWDYRRFVAAQAAV----------APAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC----------CHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCc----------CHHHHHHHHHHHHHHCCCCH
Confidence 4677777777777777777777777777766541 26899999999999999885
No 190
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.69 E-value=0.00018 Score=54.22 Aligned_cols=61 Identities=8% Similarity=-0.006 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhccc--CCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAF--LTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~--l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe 72 (152)
+++|+..|++|+++ |.+..++++||.+|....- + ..++++|+.+|++|++... +.....|.
T Consensus 145 ~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~-------~~d~~~A~~~~~~A~~~g~--~~A~~~l~ 207 (212)
T 3rjv_A 145 DVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFI-------EPNKQKALHWLNVSCLEGF--DTGCEEFD 207 (212)
T ss_dssp HHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTB-------CCCHHHHHHHHHHHHHHTC--HHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCC-------CCCHHHHHHHHHHHHHcCC--HHHHHHHH
Confidence 68999999999999 8888999999999975310 1 2389999999999999854 44444443
No 191
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.62 E-value=7e-05 Score=65.04 Aligned_cols=62 Identities=6% Similarity=-0.084 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhc-----CCCCh---HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-----CCCcHHH
Q 031846 1 MILDAISKLEEALMV-----SPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNELY 67 (152)
Q Consensus 1 mieeAIs~leeAL~i-----dP~~~---dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-----dP~Ne~Y 67 (152)
.+++|+..|+++|++ -|+|+ ..|+|||.+|..+| ++++|..+|+||+++ -|+|+..
T Consensus 355 ~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg-----------~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 355 DWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLE-----------NKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhcc-----------CHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 378999999999976 35554 45999999999876 788888888888775 6899988
Q ss_pred HHHHHH
Q 031846 68 QKSLEV 73 (152)
Q Consensus 68 rkaLe~ 73 (152)
+++...
T Consensus 424 ~~l~~~ 429 (433)
T 3qww_A 424 SEIKQE 429 (433)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 192
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.59 E-value=0.00017 Score=61.74 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH---HHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL---YQKSL 71 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~---YrkaL 71 (152)
++++++.++++|++||.+..||++.|.++..++... .-...++++++++++|+.++|+|+. |++.|
T Consensus 183 ~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~----~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~L 251 (349)
T 3q7a_A 183 WGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAE----TSSRSLQDELIYILKSIHLIPHNVSAWNYLRGF 251 (349)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCC----CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccc----cchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 459999999999999999999999999998765210 0134589999999999999999984 65554
No 193
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.58 E-value=0.0002 Score=51.31 Aligned_cols=49 Identities=20% Similarity=0.210 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHh-cccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTS-HAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~-~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
+++|+..|++|.+. .+.+|+++||.+|.. .|. ..++++|+++|++|.+.
T Consensus 41 ~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~--------~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 41 KQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYV--------KKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSS--------CCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCC--------CccHHHHHHHHHHHHcC
Confidence 45678888888776 677888888888866 121 13777788888888776
No 194
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.56 E-value=0.00013 Score=62.51 Aligned_cols=53 Identities=9% Similarity=-0.041 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 3 eeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
++|+..++++|++||++..+|+..|.++..++ ..+++++++++++|.++|+|.
T Consensus 71 e~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~----------~~l~eEL~~~~~~L~~nPKny 123 (349)
T 3q7a_A 71 ERALELTEIIVRMNPAHYTVWQYRFSLLTSLN----------KSLEDELRLMNEFAVQNLKSY 123 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----------CCHHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHhCCCcH
Confidence 67888888888888888888888888887654 146666666666666666664
No 195
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.53 E-value=0.00012 Score=64.45 Aligned_cols=54 Identities=15% Similarity=0.166 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHhc-----CCCC---hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-----CCCcH
Q 031846 1 MILDAISKLEEALMV-----SPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~i-----dP~~---~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-----dP~Ne 65 (152)
.+++|+..|+++|++ -|+| ..++.|||.+|..+| +|++|..+|++||++ -|+|+
T Consensus 324 ~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g-----------~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 324 LYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQ-----------AYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 378999999999975 3445 456999999999876 888888888888876 57775
No 196
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.53 E-value=0.00012 Score=63.64 Aligned_cols=83 Identities=14% Similarity=-0.034 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCCh-----------------------HH----------HHHhHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQ-----------------------DE----------AKEYFN 48 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~-----------------------~e----------A~~~~e 48 (152)
+.+|+..|++||++||+++.||--|+.+|.-+....+.. .. -+++++
T Consensus 215 ~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d 294 (372)
T 3ly7_A 215 LNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTD 294 (372)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCCHH
Confidence 478999999999999999999999888884321111110 00 135999
Q ss_pred HHHHHHHHHHHcCCCcHH-------------HHHHHHHHhcCchhhHHH
Q 031846 49 KATLYFQQAVDEEPSNEL-------------YQKSLEVAAKAPELHMEI 84 (152)
Q Consensus 49 kA~~~FqkAleldP~Ne~-------------YrkaLe~~~kapel~~e~ 84 (152)
+|+.+++||+++||+... +..+++.+.+|..|.+-.
T Consensus 295 ~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 295 ESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 999999999999987541 445556666665555444
No 197
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.53 E-value=9.7e-05 Score=63.68 Aligned_cols=54 Identities=11% Similarity=0.110 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHhc-----CCCC---hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-----CCCcH
Q 031846 1 MILDAISKLEEALMV-----SPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNE 65 (152)
Q Consensus 1 mieeAIs~leeAL~i-----dP~~---~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-----dP~Ne 65 (152)
++++|+..|+++|++ -|+| ..++.|||.+|..+| +|++|+.+|+|+|++ -|+|+
T Consensus 302 ~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g-----------~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 302 KWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLG-----------LLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp CHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred cHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhc-----------cHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 478999999999975 3555 456999999998765 888888888888865 47776
No 198
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.46 E-value=0.0007 Score=48.38 Aligned_cols=45 Identities=18% Similarity=0.076 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld 61 (152)
+++|+..|+++.+.+ +.++. ||..|... ..+++|+++|++|.+.+
T Consensus 11 ~~~A~~~~~~aa~~g--~~~a~--lg~~y~~g-----------~~~~~A~~~~~~Aa~~g 55 (138)
T 1klx_A 11 LKKAIQYYVKACELN--EMFGC--LSLVSNSQ-----------INKQKLFQYLSKACELN 55 (138)
T ss_dssp HHHHHHHHHHHHHTT--CTTHH--HHHHTCTT-----------SCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCC--CHhhh--HHHHHHcC-----------CCHHHHHHHHHHHHcCC
Confidence 567888888888776 44445 88877653 25666888888888773
No 199
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.45 E-value=0.00017 Score=63.52 Aligned_cols=65 Identities=9% Similarity=-0.027 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHhc-----CCCCh---HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHH-----cCCCcHHH
Q 031846 1 MILDAISKLEEALMV-----SPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD-----EEPSNELY 67 (152)
Q Consensus 1 mieeAIs~leeAL~i-----dP~~~---dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAle-----ldP~Ne~Y 67 (152)
.+++|+..|+++|++ -|+|+ .+++|||.+|..+| ++++|..+|+||++ +-|+|+..
T Consensus 366 ~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G-----------~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 434 (490)
T 3n71_A 366 AYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAG-----------HIEVGHGMICKAYAILLVTHGPSHPIT 434 (490)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHTCTTSHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHHHhCCCChHH
Confidence 378999999999976 45554 45999999999876 78888888888886 47999987
Q ss_pred HHHHHHHhc
Q 031846 68 QKSLEVAAK 76 (152)
Q Consensus 68 rkaLe~~~k 76 (152)
.+.+.+...
T Consensus 435 ~~~~~~l~~ 443 (490)
T 3n71_A 435 KDLEAMRMQ 443 (490)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777655544
No 200
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.44 E-value=0.00022 Score=61.44 Aligned_cols=64 Identities=11% Similarity=0.112 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHhc-----CCCChH---HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-----CCCcHHH
Q 031846 1 MILDAISKLEEALMV-----SPNRHD---TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNELY 67 (152)
Q Consensus 1 mieeAIs~leeAL~i-----dP~~~d---A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-----dP~Ne~Y 67 (152)
.+++|+..++++|++ -|+|++ .++|||.+|..+| ++++|..+|+||+++ -|+|+.+
T Consensus 344 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g-----------~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 412 (429)
T 3qwp_A 344 LLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQG-----------MFPQAMKNLRLAFDIMRVTHGREHSLI 412 (429)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHTCTTSHHH
T ss_pred cHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 378999999999965 355554 5999999999876 777777777777764 7999999
Q ss_pred HHHHHHHh
Q 031846 68 QKSLEVAA 75 (152)
Q Consensus 68 rkaLe~~~ 75 (152)
+..+....
T Consensus 413 ~~~~~~l~ 420 (429)
T 3qwp_A 413 EDLILLLE 420 (429)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876544
No 201
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.44 E-value=8.8e-05 Score=51.28 Aligned_cols=43 Identities=19% Similarity=0.149 Sum_probs=36.0
Q ss_pred CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 16 SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 16 dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+|+++++++.+|.+++..+- ....++|..+|++||++||+|..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~--------~~~~~~A~~~l~~AL~~dp~~~r 44 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHK--------QAMTDEVSLLLEQALQLEPYNEA 44 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTT--------TCCCHHHHHHHHHHHHHCTTCHH
T ss_pred CCCCHHHHHHHHHHHHHhcC--------CCCCHHHHHHHHHHHHHCcCCHH
Confidence 79999999999999975430 12379999999999999999973
No 202
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.37 E-value=0.0004 Score=57.98 Aligned_cols=52 Identities=13% Similarity=0.044 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHh-cccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTS-HAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~-~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
+++|+..|++|++.+ +.+++++||.+|.. .| ..+++++|+.+|++|++++|+
T Consensus 383 ~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g--------~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 383 EQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLG--------VERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSS--------SCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCC--------CCCCHHHHHHHHHHHHHCCCC
Confidence 455666666666543 45666666666653 01 023677777777777777743
No 203
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.34 E-value=0.00026 Score=59.07 Aligned_cols=51 Identities=20% Similarity=0.111 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhcCCCC--hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC--CC
Q 031846 2 ILDAISKLEEALMVSPNR--HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE--PS 63 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~--~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld--P~ 63 (152)
+++|+..|++++...++. ++++++||.++..+| +|++|+.+|++|+.-+ |.
T Consensus 151 ~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG-----------~~~eAl~~l~~a~~g~~~P~ 205 (282)
T 4f3v_A 151 WTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLA-----------LFTEAERRLTEANDSPAGEA 205 (282)
T ss_dssp HHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTSTTTTT
T ss_pred HHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHhcCCCCcc
Confidence 567788888777654332 568999999999865 9999999999999665 65
No 204
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.34 E-value=0.00017 Score=56.95 Aligned_cols=52 Identities=15% Similarity=0.000 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHhcCCCChH-----HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALMVSPNRHD-----TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~d-----A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..++++|.+.|..+. ++++||.+|... +++++|..+|++|+++.|+
T Consensus 29 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~-----------g~~~~A~~~~~~al~~~~~ 85 (373)
T 1hz4_A 29 NPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCK-----------GELTRSLALMQQTEQMARQ 85 (373)
T ss_dssp CHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhc-----------CcHHHHHHHHHHHHHHHHh
Confidence 368999999999999987754 688999999875 4999999999999998764
No 205
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.17 E-value=0.00094 Score=55.74 Aligned_cols=49 Identities=20% Similarity=0.104 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
+++|+..|++|++. .+.+++++||.+|...|. ..++++|+++|++|++.
T Consensus 312 ~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~--------~~~~~~A~~~~~~a~~~ 360 (490)
T 2xm6_A 312 REQAISWYTKSAEQ--GDATAQANLGAIYFRLGS--------EEEHKKAVEWFRKAAAK 360 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCC--------HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCC--------cccHHHHHHHHHHHHHC
Confidence 45555555555554 344555555555554431 23555555555555554
No 206
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.00065 Score=54.30 Aligned_cols=52 Identities=10% Similarity=0.029 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHhcCCCChH-----------------HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALMVSPNRHD-----------------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~d-----------------A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|++.|+++++++|+..+ |+.+||.+|..+| ++++|+++|++++.+.+.
T Consensus 19 ~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~-----------~~~~a~~~~~~~~~~~~~ 87 (434)
T 4b4t_Q 19 QYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMG-----------AKDKLREFIPHSTEYMMQ 87 (434)
T ss_dssp CHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHTHHHHHT
T ss_pred CHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHH
Confidence 378999999999999998764 6999999999865 888888888888876554
No 207
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.09 E-value=0.00055 Score=54.05 Aligned_cols=52 Identities=13% Similarity=0.076 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHhcC--------CCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 1 MILDAISKLEEALMVS--------PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~leeAL~id--------P~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|+++|++. |....++.+||.+|...| ++++|..+|++|+++.|.
T Consensus 108 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 108 FLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWA-----------RLDEAEASARSGIEVLSS 167 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHhhc
Confidence 3689999999999876 445678899999998765 999999999999999886
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.09 E-value=0.00056 Score=58.29 Aligned_cols=52 Identities=12% Similarity=0.025 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcCCCC-hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 2 ILDAISKLEEALMVSPNR-HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~-~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
.+.|..+|++||+|||++ .++++..|..|... .+++++|..++++|+..+|.
T Consensus 220 ~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~----------~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 220 MEKAHTAFEHLTRYCSAHDPDHHITYADALCIP----------LNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTT----------TTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHh----------cCCHHHHHHHHHHHHcCCCC
Confidence 478999999999999986 99999999998763 24999999999999999887
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.86 E-value=0.00086 Score=51.72 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC-CCc-H--------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE-PSN-E-------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld-P~N-e-------------- 65 (152)
++.+...|++.++.+|...++.|++|.++.+.. ...++++++.+|+..++.+ |++ .
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~--------~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~ 85 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSK--------YNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK 85 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCS--------SHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCC--------CHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHcc
Confidence 567889999999999999999999999998743 3568999999999999999 733 2
Q ss_pred HHHHHHHHHhcCchhhH
Q 031846 66 LYQKSLEVAAKAPELHM 82 (152)
Q Consensus 66 ~YrkaLe~~~kapel~~ 82 (152)
.|.++++.++...+..|
T Consensus 86 ~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 86 EYEKALKYVRGLLQTEP 102 (152)
T ss_dssp CHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHhcCC
Confidence 37777766665555554
No 210
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.82 E-value=0.0022 Score=54.11 Aligned_cols=50 Identities=4% Similarity=0.034 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAV 58 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAl 58 (152)
+++|+..|+++++.+|..+.++++||.+|..... ...++++|+++|++|.
T Consensus 195 ~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~-------~~~d~~~A~~~~~~aa 244 (452)
T 3e4b_A 195 QAELLKQMEAGVSRGTVTAQRVDSVARVLGDATL-------GTPDEKTAQALLEKIA 244 (452)
T ss_dssp HHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGG-------SSCCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-------CCCCHHHHHHHHHHHc
Confidence 4678888888888888888888888888754211 1247777777777776
No 211
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.57 E-value=0.0042 Score=52.35 Aligned_cols=49 Identities=12% Similarity=0.079 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld 61 (152)
+++|+..|+++. |.+.+++++||.+|.... ..+++++|+++|++|++.+
T Consensus 233 ~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~--------~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 233 EKTAQALLEKIA---PGYPASWVSLAQLLYDFP--------ELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHHHG---GGSTHHHHHHHHHHHHSG--------GGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHhCC--------CCCCHHHHHHHHHHHHHCC
Confidence 578999999988 899999999999854211 1458889999999988765
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.12 E-value=0.0081 Score=50.64 Aligned_cols=58 Identities=12% Similarity=-0.051 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHHHhc----------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHH
Q 031846 1 MILDAISKLEEALMV----------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKS 70 (152)
Q Consensus 1 mieeAIs~leeAL~i----------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~Yrka 70 (152)
.++||...|+.++++ +|++++++.|+......+| + +|.++++++.+++|+|+.-...
T Consensus 226 ~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lg-----------k--~a~~l~~qL~~~~P~hp~i~d~ 292 (310)
T 3mv2_B 226 NIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQG-----------L--DTEDLTNQLVKLDHEHAFIKHH 292 (310)
T ss_dssp CHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTT-----------C--TTHHHHHHHHHTTCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhC-----------h--HHHHHHHHHHHhCCCChHHHHH
Confidence 478999999988887 6999999999998888765 3 7899999999999999864443
Q ss_pred H
Q 031846 71 L 71 (152)
Q Consensus 71 L 71 (152)
.
T Consensus 293 ~ 293 (310)
T 3mv2_B 293 Q 293 (310)
T ss_dssp H
T ss_pred H
Confidence 3
No 213
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.005 Score=49.08 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHhc------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC
Q 031846 1 MILDAISKLEEALMV------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~leeAL~i------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP 62 (152)
++++|+..+++++.+ ++...+++.++|.+|..+| +|++|..+|++|+.+.+
T Consensus 150 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 150 QYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLR-----------NLAKSKASLTAARTAAN 206 (434)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhC-----------cHHHHHHHHHHHHHHhh
Confidence 478999999999876 5556779999999999754 99999999999998754
No 214
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=95.19 E-value=0.078 Score=38.96 Aligned_cols=67 Identities=22% Similarity=0.304 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHH-----HHHHHHhc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQ-----KSLEVAAK 76 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~Yr-----kaLe~~~k 76 (152)
++.|+..+.+|++.|-. | +..+|...|.+|+++|.+++..+|.|+.-+ +.-+....
T Consensus 15 l~kAi~lv~~Ave~D~a--------g-----------~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~R 75 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKA--------G-----------NYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDR 75 (117)
T ss_dssp HHHHHHHHHHHHHHHHH--------T-----------CHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc--------c-----------CHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence 57788888888743211 1 224566788899999999999886665322 34455556
Q ss_pred CchhhHHHHHh
Q 031846 77 APELHMEIHKH 87 (152)
Q Consensus 77 apel~~e~~~~ 87 (152)
+-+|...|.+.
T Consensus 76 AE~LK~~l~~~ 86 (117)
T 2cpt_A 76 AEKLKEYLKNK 86 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 65666555443
No 215
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.17 E-value=0.058 Score=48.06 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~ 73 (152)
++.|...|++|+.++|++..+|..||......| +.-+|+-||-|+|....-.+..+.+|..
T Consensus 168 ~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~-----------~~l~a~y~y~rsl~~~~Pf~~a~~nL~~ 228 (497)
T 1ya0_A 168 TSQAESYYRHAAQLVPSNGQPYNQLAILASSKG-----------DHLTTIFYYCRSIAVKFPFPAASTNLQK 228 (497)
T ss_dssp HHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHSSSBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHhccc-----------ccHHHHHHHHHHHhcCCCChhHHHHHHH
Confidence 468999999999999999999999999998654 7778999999999988778877777643
No 216
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.13 E-value=0.032 Score=56.42 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP 62 (152)
.++|||+.||.+|.+||.|...+..||++|.+.. -++..+++++|...+++.|
T Consensus 1295 ~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~---------peklmEhlk~f~~rini~k 1347 (1630)
T 1xi4_A 1295 YFEELITMLEAALGLERAHMGMFTELAILYSKFK---------PQKMREHLELFWSRVNIPK 1347 (1630)
T ss_pred CHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCC---------HHHHHHHHHHHHHhcccch
Confidence 3789999999999999999999999999999864 4788899999999999888
No 217
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.09 E-value=0.045 Score=55.36 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
++|||..|++| +++++|+++|.++.+.| +|++|+++|+.|.+.+++.
T Consensus 1121 ~kEAIdsYiKA-----dD~say~eVa~~~~~lG-----------kyEEAIeyL~mArk~~~e~ 1167 (1630)
T 1xi4_A 1121 VKEAIDSYIKA-----DDPSSYMEVVQAANTSG-----------NWEELVKYLQMARKKARES 1167 (1630)
T ss_pred HHHHHHHHHhc-----CChHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhcccc
Confidence 44555555443 44455555555554432 6666666666666666543
No 218
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=94.93 E-value=0.022 Score=44.72 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHhcCCCChH---------HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 1 MILDAISKLEEALMVSPNRHD---------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~d---------A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
+|+.|+.....++.+..++.+ +++++|+++... ++|.+|..+|++||.+
T Consensus 35 LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~-----------~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 35 LHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHD-----------KEYRNAVSKYTMALQQ 92 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHHH
Confidence 578888888887766554444 899999999975 4999999999998765
No 219
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=94.43 E-value=0.14 Score=45.36 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcc------------cCCCChH-------HHHHhHHHHHHHHHHHHHcC
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHA------------FLTPDQD-------EAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g------------~l~pd~~-------eA~~~~ekA~~~FqkAleld 61 (152)
++++|++.|++| ++..+|-.++.++...| .+.||.. +..++|++|+.+|+++|.+|
T Consensus 163 ~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 163 EYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLE 237 (449)
T ss_dssp CHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred cHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCc
Confidence 478999999999 24444444433333322 0000000 11259999999999999999
Q ss_pred CCcH----------------HHHHHHHHHhcCchhhH
Q 031846 62 PSNE----------------LYQKSLEVAAKAPELHM 82 (152)
Q Consensus 62 P~Ne----------------~YrkaLe~~~kapel~~ 82 (152)
+.|. .....++++.+..++..
T Consensus 238 ~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 238 RAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp TCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 9994 35556677766666665
No 220
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.93 E-value=0.029 Score=49.82 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP 62 (152)
.++|||+.|+++|.+++.|...+..||.+|++.. -++..++++.|...+.+.|
T Consensus 222 ~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~---------p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 222 YFEELITMLEAALGLERAHMGMFTELAILYSKFK---------PQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp CHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC---------HHHHHHHHHHHSTTSCHHH
T ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC---------HHHHHHHHHHHHHHhcCcH
Confidence 4789999999999999999999999999999875 4788888889988888888
No 221
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.72 E-value=0.23 Score=41.73 Aligned_cols=59 Identities=17% Similarity=0.122 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----HHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE----LYQKSL 71 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne----~YrkaL 71 (152)
+++|++.++..|+-+|.+.+.-+.|-..|+-. +++++|..-.+-+.+++|+.. .||.++
T Consensus 13 L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~-----------G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI 75 (273)
T 1zbp_A 13 LQQALELLIEAIKASPKDASLRSSFIELLCID-----------GDFERADEQLMQSIKLFPEYLPGASQLRHLV 75 (273)
T ss_dssp HHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHhCchhhHHHHHHHHHH
Confidence 68999999999999999999999999998864 599999999999999999985 677775
No 222
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=93.67 E-value=0.077 Score=35.93 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhH
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLG 27 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLG 27 (152)
.+++|+..+++||+++|++..++.|++
T Consensus 61 ~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 61 DLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 378999999999999999999999998
No 223
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=93.13 E-value=0.21 Score=41.91 Aligned_cols=47 Identities=21% Similarity=0.239 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC
Q 031846 5 AISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 5 AIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP 62 (152)
|++.|++.++.++....+++.||.+|... +++++|++++++.|+.+|
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~-----------g~~eeAL~~l~~~i~~~~ 131 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAIL-----------GDLDKSLETCVEGIDNDE 131 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHc-----------CCHHHHHHHHHHHhccCC
Confidence 44555555555444455555556555542 355666666666555555
No 224
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=92.97 E-value=0.25 Score=34.59 Aligned_cols=68 Identities=10% Similarity=0.093 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH----HHHHHHHHhc
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL----YQKSLEVAAK 76 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~----YrkaLe~~~k 76 (152)
|++.|+..+.+|++.|-.. +..+|...|.+|+++|.+|+..+|+... -.+.-+....
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g-------------------~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~R 71 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAES-------------------RYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDR 71 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-------------------CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 5788888888887664322 2245667899999999999999987653 2244455566
Q ss_pred CchhhHHHHHh
Q 031846 77 APELHMEIHKH 87 (152)
Q Consensus 77 apel~~e~~~~ 87 (152)
+-+|...|.+.
T Consensus 72 AE~LK~~l~~~ 82 (93)
T 1wfd_A 72 AENIKKYLDQE 82 (93)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 66666555544
No 225
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=92.84 E-value=0.54 Score=40.56 Aligned_cols=51 Identities=6% Similarity=-0.084 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 4 DAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 4 eAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.....|+++|...|...+.|+..+.-+... +++++|.+.|++|+.. |.+..
T Consensus 197 Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~-----------~~~~~ar~i~erAi~~-P~~~~ 247 (493)
T 2uy1_A 197 RMHFIHNYILDSFYYAEEVYFFYSEYLIGI-----------GQKEKAKKVVERGIEM-SDGMF 247 (493)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH-CCSSH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhC-CCcHH
Confidence 356799999999999999988888776654 4899999999999999 98864
No 226
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.74 E-value=0.65 Score=39.04 Aligned_cols=68 Identities=18% Similarity=0.167 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---HHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---LYQKSLEV 73 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---~YrkaLe~ 73 (152)
+++|+..+++++..+|-+.++|..|=.+|...| +..+|...|++....+.+-|-++|.-+ +|+..|.-
T Consensus 187 ~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~G----r~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~il~~ 257 (388)
T 2ff4_A 187 ASAVIAELEALTFEHPYREPLWTQLITAYYLSD----RQSDALGAYRRVKTTLADDLGIDPGPTLRALNERILRQ 257 (388)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTT----CHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHcC
Confidence 578999999999999999999999999999876 567888888888888888888999876 56666643
No 227
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=91.86 E-value=0.31 Score=44.60 Aligned_cols=76 Identities=13% Similarity=0.012 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC---cH-------------
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS---NE------------- 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~---Ne------------- 65 (152)
++.|...|+++|+..|+..+.+-..+....+ .++.++|-..|++|+...|+ +.
T Consensus 486 ~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~-----------~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~ 554 (679)
T 4e6h_A 486 TKTACKVLELGLKYFATDGEYINKYLDFLIY-----------VNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKV 554 (679)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----------HTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHc
Confidence 4678889999999999887655444444333 45899999999999999984 21
Q ss_pred --------HHHHHHHHHhcCchhhHHHHHhh
Q 031846 66 --------LYQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 66 --------~YrkaLe~~~kapel~~e~~~~~ 88 (152)
++++.++..++.+.+..-+.|..
T Consensus 555 G~~~~~~~v~~R~~~~~P~~~~~~~f~~ry~ 585 (679)
T 4e6h_A 555 GSLNSVRTLEKRFFEKFPEVNKLEEFTNKYK 585 (679)
T ss_dssp CCSHHHHHHHHHHHHHSTTCCHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhCCCCcHHHHHHHHhc
Confidence 58888999999999888888865
No 228
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.33 E-value=0.49 Score=35.22 Aligned_cols=40 Identities=13% Similarity=0.275 Sum_probs=31.2
Q ss_pred ChHHHHHhHHHHHHHHHHHHHcCCC-----cHHHHHHHHHHhcCc
Q 031846 39 DQDEAKEYFNKATLYFQQAVDEEPS-----NELYQKSLEVAAKAP 78 (152)
Q Consensus 39 d~~eA~~~~ekA~~~FqkAleldP~-----Ne~YrkaLe~~~kap 78 (152)
++++|.+.|.+.+.+++++|.+..+ .+.|.++.+|-.|=-
T Consensus 37 ~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~ 81 (116)
T 2dl1_A 37 QKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMK 81 (116)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHH
Confidence 4577889999999999999999885 567777766655543
No 229
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=89.23 E-value=0.6 Score=42.68 Aligned_cols=53 Identities=21% Similarity=0.148 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 3 eeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.|-+..||++|..||.+.++|..+-....+. +.++.|-..|++||...|....
T Consensus 49 ~d~i~~lE~~l~~np~d~~~W~~yi~~~~~~-----------~~~~~aR~vyEraL~~fP~~~~ 101 (679)
T 4e6h_A 49 SDVIGKLNDMIEEQPTDIFLYVKLLKHHVSL-----------KQWKQVYETFDKLHDRFPLMAN 101 (679)
T ss_dssp SCHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHCcCCHHHHHHHHHHHHhc-----------CcHHHHHHHHHHHHHHCCCCHH
Confidence 3567899999999999999999998887754 3788999999999999998763
No 230
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=88.88 E-value=0.48 Score=32.50 Aligned_cols=45 Identities=18% Similarity=0.071 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
++.||+...+|++.|-.. +-.+|...|.+|+++|.+++..+|+..
T Consensus 8 ~~~Ai~lv~~Ave~D~~g-------------------~y~eAl~lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEG-------------------KVEDAITYYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 577888888887664222 224566789999999999999888654
No 231
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=88.54 E-value=1.2 Score=30.19 Aligned_cols=45 Identities=16% Similarity=0.224 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
++.|+..+.+|++.|-.. +..+|...|.+|+++|.+++..+|+..
T Consensus 10 l~~A~~l~~~Av~~D~~g-------------------~y~eAl~~Y~~aie~l~~a~k~e~~~~ 54 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTAT-------------------QYEEAYTAYYNGLDYLMLALKYEKNPK 54 (85)
T ss_dssp HHHHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHHHHHHcC-------------------CHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 567777777777442211 224566788888888889988887544
No 232
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=84.09 E-value=0.7 Score=34.38 Aligned_cols=55 Identities=7% Similarity=0.082 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC-CCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE-PSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld-P~N 64 (152)
+..+...|++++..++...++-|+++.++.... ...+..+++..++..+..+ |++
T Consensus 17 l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~--------~~~d~~~GI~lLe~l~~~~~p~~ 72 (126)
T 1nzn_A 17 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTR--------YNDDIRKGIVLLEELLPKGSKEE 72 (126)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSS--------SHHHHHHHHHHHHHHTTTSCHHH
T ss_pred HHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCC--------CHHHHHHHHHHHHHHHhcCCcch
Confidence 456778899999999999999999999997643 2467788999999999988 633
No 233
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=83.57 E-value=1.4 Score=30.35 Aligned_cols=45 Identities=18% Similarity=0.041 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
++.|++...+|++.|-.. +-.+|...|.+|+++|.+++..+|+..
T Consensus 16 ~~~Ai~lv~~Ave~D~~g-------------------~y~eAl~lY~~aie~l~~alk~e~d~~ 60 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEG-------------------NAEEAITNYKKAIEVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 467888888887653222 224566688899999999999887653
No 234
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=76.59 E-value=0.51 Score=40.40 Aligned_cols=65 Identities=25% Similarity=0.302 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHH-----HHHHh
Q 031846 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKS-----LEVAA 75 (152)
Q Consensus 1 mieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~Yrka-----Le~~~ 75 (152)
+++.|++..++|++.|-. |+ ..+|...|.+|+++|.+++..++.|+..+.. -+...
T Consensus 7 ~~~~A~~~~~~Av~~D~~--------g~-----------~~eA~~~Y~~a~~~l~~~~k~e~~~~~~k~~ir~k~~ey~~ 67 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKA--------GN-----------YEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLD 67 (444)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHc--------CC-----------HHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHH
Confidence 467888888888877543 11 1345668889999999999887555543332 23334
Q ss_pred cCchhhHHH
Q 031846 76 KAPELHMEI 84 (152)
Q Consensus 76 kapel~~e~ 84 (152)
.+-+|...+
T Consensus 68 Rae~Lk~~l 76 (444)
T 2zan_A 68 RAEKLKEYL 76 (444)
T ss_dssp ---------
T ss_pred HHHHHHHHh
Confidence 444444444
No 235
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=76.05 E-value=3.2 Score=38.86 Aligned_cols=44 Identities=11% Similarity=0.168 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQ 56 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~Fqk 56 (152)
++-|+..-++|+.+-|..-+.|+.|..+|..+| +||.|+-...-
T Consensus 353 ~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~-----------d~e~ALLtLNS 396 (754)
T 4gns_B 353 YELALGVSNTSTELALDSFESWYNLARCHIKKE-----------EYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTT-----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhc-----------cHHHHHHHHhc
Confidence 678999999999999999999999999999864 99999965444
No 236
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=74.38 E-value=9.6 Score=31.12 Aligned_cols=51 Identities=22% Similarity=0.244 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHH--h---------------cCCCChHHHHHh-HHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 2 ILDAISKLEEAL--M---------------VSPNRHDTLWCL-GNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 2 ieeAIs~leeAL--~---------------idP~~~dA~~nL-GnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
+..|+..++..| + +||.+-+-+++| |..++..| +-++|+.+|.+.+...|=
T Consensus 78 YkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g-----------~r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 78 YKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSG-----------YREEGIGHYVRSFGKSFL 146 (242)
T ss_dssp HHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhc-----------CHHHhhhHhhhhcCCccc
Confidence 567888888888 2 356777777776 77777654 999999999999998884
No 237
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=74.36 E-value=2.4 Score=29.27 Aligned_cols=26 Identities=12% Similarity=0.104 Sum_probs=19.5
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 41 DEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 41 ~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+|...|.+|+++|.+++..+|+...
T Consensus 33 ~eAl~lY~~Aie~ll~alk~e~d~~~ 58 (86)
T 4a5x_A 33 PQALVCYQEGIDLLLQVLKGTKDNTK 58 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCHHH
Confidence 45667788888888888888886643
No 238
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=72.64 E-value=8.7 Score=26.34 Aligned_cols=16 Identities=19% Similarity=0.532 Sum_probs=11.1
Q ss_pred HHhHHHHHHHHHHHHH
Q 031846 44 KEYFNKATLYFQQAVD 59 (152)
Q Consensus 44 ~~~~ekA~~~FqkAle 59 (152)
.++|++|+.+|+.||+
T Consensus 29 ~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 29 ESRYPQALVCYQEGID 44 (86)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 4577777777777773
No 239
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=72.45 E-value=7 Score=30.42 Aligned_cols=40 Identities=15% Similarity=0.071 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkA 57 (152)
++.|.+..++. ++..-|-.||.+-..+| +++-|..||+++
T Consensus 21 l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~g-----------n~~lAe~cy~~~ 60 (177)
T 3mkq_B 21 LDAALDEAKKL-----NDSITWERLIQEALAQG-----------NASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHHHHHH-----CCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-----CCHHHHHHHHHHHHHcC-----------ChHHHHHHHHHh
Confidence 34455444433 45667888999988765 999999999986
No 240
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=71.36 E-value=6 Score=35.04 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=27.4
Q ss_pred HHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 21 DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 21 dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
..+-|||...... +.++.|..||++|+.++|++-
T Consensus 153 r~l~~LGDL~RY~-----------~~~~~A~~~Y~~A~~~~P~~G 186 (497)
T 1ya0_A 153 HCLVHLGDIARYR-----------NQTSQAESYYRHAAQLVPSNG 186 (497)
T ss_dssp HHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTBS
T ss_pred HHHHHcccHHHHH-----------HHHHHHHHHHHHHHHhCCCCC
Confidence 3566778887653 478999999999999999983
No 241
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=65.36 E-value=19 Score=25.99 Aligned_cols=35 Identities=31% Similarity=0.362 Sum_probs=20.8
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhc
Q 031846 41 DEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAK 76 (152)
Q Consensus 41 ~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~k 76 (152)
++|.+..++|..|+..|+++- .++..+.+|++-.+
T Consensus 32 deAIech~kAa~yL~eAmklt-qs~qa~~SLqLQrd 66 (97)
T 2crb_A 32 EEAISCHRKATTYLSEAMKLT-ESEQAHLSLELQRD 66 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHH
Confidence 444444555555555566676 67777777766544
No 242
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.65 E-value=2.9 Score=31.03 Aligned_cols=38 Identities=13% Similarity=0.371 Sum_probs=27.0
Q ss_pred HHHhHHHHHHHHHHHHHcCCCc------HHHHHHHHHHhcCchh
Q 031846 43 AKEYFNKATLYFQQAVDEEPSN------ELYQKSLEVAAKAPEL 80 (152)
Q Consensus 43 A~~~~ekA~~~FqkAleldP~N------e~YrkaLe~~~kapel 80 (152)
.+..+++|..|..+||.+|-.. ++|++.++-..++..+
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I 58 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISI 58 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccc
Confidence 4578889999999999887732 2677777666555433
No 243
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=62.71 E-value=41 Score=28.92 Aligned_cols=60 Identities=13% Similarity=-0.014 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHh--cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHH--cCCCcHHHHHHHHH
Q 031846 2 ILDAISKLEEALM--VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD--EEPSNELYQKSLEV 73 (152)
Q Consensus 2 ieeAIs~leeAL~--idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAle--ldP~Ne~YrkaLe~ 73 (152)
+++|...|++..+ +.|+ ...|..|=.+|.+.| ++++|.+.|++-.+ +.|+...|.-.+..
T Consensus 121 ~~~A~~l~~~M~~~g~~Pd-~~tyn~lI~~~~~~g-----------~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~ 184 (501)
T 4g26_A 121 PEMAFDMVKQMKAFGIQPR-LRSYGPALFGFCRKG-----------DADKAYEVDAHMVESEVVPEEPELAALLKV 184 (501)
T ss_dssp HHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCc-cceehHHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 4556666665554 3333 244555555555433 55666666665544 34555555444433
No 244
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=62.44 E-value=4.3 Score=27.78 Aligned_cols=37 Identities=19% Similarity=0.077 Sum_probs=22.8
Q ss_pred HhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhcCchhhH
Q 031846 45 EYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHM 82 (152)
Q Consensus 45 ~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~kapel~~ 82 (152)
...++|++..++|++.|-. ..|..++.++.++.|+-+
T Consensus 14 ~~~~~Ai~lv~~Ave~D~~-g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 14 MLEEMARKYAINAVKADKE-GNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHH
Confidence 4567888888888887542 245555555555554433
No 245
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=61.14 E-value=26 Score=27.21 Aligned_cols=52 Identities=15% Similarity=0.053 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+++|.+.|+.++.+.-+. |...+.-|.... -.++.++|...+.+|+.+.|..
T Consensus 76 ~d~aR~vy~~a~~~hKkF--AKiwi~~AqFEi---------Rqgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 76 PDDARDYFQMARANCKKF--AFVHISFAQFEL---------SQGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp GGGCHHHHHHHHHHCTTB--HHHHHHHHHHHH---------HTTCHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHHHhHHH--HHHHHHHHHHHH---------HcccHHHHHHHHHHHhccCCCc
Confidence 577889999999884444 555555555322 2469999999999999999953
No 246
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=60.44 E-value=4.9 Score=27.29 Aligned_cols=17 Identities=24% Similarity=0.147 Sum_probs=10.5
Q ss_pred hHHHHHHHHHHHHHcCC
Q 031846 46 YFNKATLYFQQAVDEEP 62 (152)
Q Consensus 46 ~~ekA~~~FqkAleldP 62 (152)
..++|+++.++|++.|-
T Consensus 7 ~~~~Ai~lv~~Ave~D~ 23 (83)
T 2v6y_A 7 LEDMARKYAILAVKADK 23 (83)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34566666666666643
No 247
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=60.35 E-value=9 Score=29.72 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=27.2
Q ss_pred HHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 23 LWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 23 ~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
+|.+|..+... ++|.+|.++|.+|+..-|++
T Consensus 17 ~YYlGr~~~~~-----------~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 17 KYYVGRKAMFD-----------SDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHH-----------hCHHHHHHHHHHHHHHCCHh
Confidence 78899998864 59999999999999998865
No 248
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=60.07 E-value=4 Score=28.31 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHcCCCcHHHHHHHHHHhcCchhhHHHH
Q 031846 46 YFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIH 85 (152)
Q Consensus 46 ~~ekA~~~FqkAleldP~Ne~YrkaLe~~~kapel~~e~~ 85 (152)
..++|++.+++|++.|-. ..|..++.++..+.|+-+...
T Consensus 11 ~l~~Ai~lv~~Ave~D~~-g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAE-SRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH
Confidence 556777888888777543 445666666655555554443
No 249
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=59.92 E-value=3.2 Score=30.20 Aligned_cols=17 Identities=24% Similarity=0.382 Sum_probs=10.6
Q ss_pred HHHhHHHHHHHHHHHHH
Q 031846 43 AKEYFNKATLYFQQAVD 59 (152)
Q Consensus 43 A~~~~ekA~~~FqkAle 59 (152)
..++|++|+.+|++|++
T Consensus 30 ~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHH
Confidence 33566666666666664
No 250
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=58.57 E-value=5.3 Score=28.33 Aligned_cols=33 Identities=12% Similarity=0.261 Sum_probs=15.4
Q ss_pred hHHHHHhHHHHHHHHHHHHHcCC--CcHHHHHHHH
Q 031846 40 QDEAKEYFNKATLYFQQAVDEEP--SNELYQKSLE 72 (152)
Q Consensus 40 ~~eA~~~~ekA~~~FqkAleldP--~Ne~YrkaLe 72 (152)
+++|.+.|.+.+.+++++|.+.- ..+.|.++-.
T Consensus 35 k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~ 69 (89)
T 3eab_A 35 KEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARR 69 (89)
T ss_dssp GGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHH
Confidence 44445555555555555555322 3344444433
No 251
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=57.09 E-value=10 Score=25.71 Aligned_cols=12 Identities=33% Similarity=0.387 Sum_probs=10.1
Q ss_pred ccccCCCchhhh
Q 031846 111 KKKKSSDLKYDI 122 (152)
Q Consensus 111 ~~k~~sd~~ydv 122 (152)
.+++.++|.||.
T Consensus 3 ~~~e~dpF~YDY 14 (67)
T 2jp3_A 3 PVDKGSPFYYDW 14 (67)
T ss_dssp TTSTTSGGGGGG
T ss_pred ccccCCCcccch
Confidence 467899999994
No 252
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=56.41 E-value=11 Score=24.06 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=20.9
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 41 DEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 41 ~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+..+-.|-|++|.+.|++++|++
T Consensus 24 ~D~~ESleVAiqCi~~aF~v~~~d 47 (52)
T 4gof_A 24 SDAQESLEVAIQCLETAFGVTVED 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSC
T ss_pred HhHHHHHHHHHHHHHHHcCCCccc
Confidence 456678899999999999999986
No 253
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=56.09 E-value=12 Score=32.22 Aligned_cols=29 Identities=24% Similarity=0.225 Sum_probs=23.9
Q ss_pred CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHH
Q 031846 18 NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 18 ~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkA 57 (152)
++...|-+||.++.+.+ +++.|..||+++
T Consensus 679 ~~~~~W~~la~~al~~~-----------~~~~A~~~y~~~ 707 (814)
T 3mkq_A 679 SAEMKWRALGDASLQRF-----------NFKLAIEAFTNA 707 (814)
T ss_dssp CCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHH
T ss_pred CcHhHHHHHHHHHHHcC-----------CHHHHHHHHHHc
Confidence 45667779999998754 999999999986
No 254
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=53.13 E-value=25 Score=30.04 Aligned_cols=54 Identities=11% Similarity=-0.073 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
++.|...|++| +..+..+..| +-.|+.... ..++++.|...|++|++.-|++..
T Consensus 302 ~~~AR~i~~~A-~~~~~~~~v~--i~~A~lE~~--------~~~d~~~ar~ife~al~~~~~~~~ 355 (493)
T 2uy1_A 302 LELFRKLFIEL-GNEGVGPHVF--IYCAFIEYY--------ATGSRATPYNIFSSGLLKHPDSTL 355 (493)
T ss_dssp HHHHHHHHHHH-TTSCCCHHHH--HHHHHHHHH--------HHCCSHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHh-hCCCCChHHH--HHHHHHHHH--------HCCChHHHHHHHHHHHHHCCCCHH
Confidence 46788999999 4333233333 223433221 012589999999999998888754
No 255
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=53.06 E-value=67 Score=27.60 Aligned_cols=62 Identities=15% Similarity=0.085 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHh--cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHH--cCCCcHHHHHHHHHHh
Q 031846 2 ILDAISKLEEALM--VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD--EEPSNELYQKSLEVAA 75 (152)
Q Consensus 2 ieeAIs~leeAL~--idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAle--ldP~Ne~YrkaLe~~~ 75 (152)
+++|...|++..+ +.|+ ..+|..|=.+|.+. +++++|.+.|++..+ +.|+-..|--.+..+-
T Consensus 86 l~~A~~lf~~M~~~G~~Pd-~~tyn~lI~~~~~~-----------g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~ 151 (501)
T 4g26_A 86 LSRGFDIFKQMIVDKVVPN-EATFTNGARLAVAK-----------DDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFC 151 (501)
T ss_dssp HHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHcCCCCccceehHHHHHHH
Confidence 5788888988775 4454 46788888888875 499999999998776 5788888888776653
No 256
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=52.39 E-value=6.5 Score=26.39 Aligned_cols=38 Identities=16% Similarity=0.262 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHHHcCCCcHHHHHHHHHHhcCchhhHHH
Q 031846 46 YFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEI 84 (152)
Q Consensus 46 ~~ekA~~~FqkAleldP~Ne~YrkaLe~~~kapel~~e~ 84 (152)
..++|+..+.+|++.|-. ..|..++.++..+.|+.+..
T Consensus 9 ~l~~A~~l~~~Av~~D~~-g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTA-TQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHH
Confidence 455666666666665432 34555555555555544443
No 257
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=51.98 E-value=14 Score=34.73 Aligned_cols=38 Identities=8% Similarity=-0.109 Sum_probs=30.7
Q ss_pred HHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHH
Q 031846 10 EEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAV 58 (152)
Q Consensus 10 eeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAl 58 (152)
.+.+..=|.++-.-|-+|.+|...| ++++|.+||+||-
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L~~g-----------e~~~A~~~F~kAA 867 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYLKSK-----------EAVKAVRCFKTTS 867 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHHHTT-----------CHHHHHHHHHTCC
T ss_pred HHHHhhcCCChHHHHHHHHHHHHcC-----------CHHHHHHHHHHHh
Confidence 3455666777777799999999765 9999999999875
No 258
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=51.85 E-value=29 Score=26.97 Aligned_cols=45 Identities=22% Similarity=0.273 Sum_probs=30.0
Q ss_pred hcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 14 MVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 14 ~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
-++|++.|.||+.-..+.+.| .|..+ ...++-.++|+||+..-|-
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g--~p~~d---~~l~rlrd~YerAia~~Pp 51 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNS--VPLSD---ALLNKLIGRYSQAIEALPP 51 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHT--CSCCH---HHHHHHHHHHHHHHHHSCG
T ss_pred eeCCCCHHHHHHHHHHHHHcC--CCchh---hHHHHHHHHHHHHHHcCCc
Confidence 479999999999877776544 12222 2347888899999988775
No 259
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=50.90 E-value=78 Score=23.91 Aligned_cols=82 Identities=6% Similarity=-0.051 Sum_probs=56.5
Q ss_pred HHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH---------------HHHHH
Q 031846 6 ISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------LYQKS 70 (152)
Q Consensus 6 Is~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne---------------~Yrka 70 (152)
...|++=+ .+.-..++-|+++.++.+.. ...+..+++..++..+..+|++. .|.++
T Consensus 26 r~qY~~E~-~~~vs~~t~F~YAw~Lv~S~--------~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~A 96 (144)
T 1y8m_A 26 RQQVVSEG-GPTATIQSRFNYAWGLIKST--------DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMA 96 (144)
T ss_dssp HHHHHHTT-STTSCHHHHHHHHHHHHHSS--------SHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHhc-cCCCcHHHHHHHHHHHHcCC--------CHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHH
Confidence 34444432 24667899999999987643 35688899999999999999764 26666
Q ss_pred HHHHh----------cCchhhHHHHHhhhccCCCCC
Q 031846 71 LEVAA----------KAPELHMEIHKHGLGQQTMGP 96 (152)
Q Consensus 71 Le~~~----------kapel~~e~~~~~~~q~~~~~ 96 (152)
++..+ +|-+|+..|.+.+.--|-+|.
T Consensus 97 r~y~d~lL~~eP~n~QA~~Lk~~Ie~~i~kdGliG~ 132 (144)
T 1y8m_A 97 KRYVDTLFEHERNNKQVGALKSMVEDKIQKETLKGV 132 (144)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTTTTTC
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhchhhh
Confidence 54332 555677777777766665553
No 260
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=49.87 E-value=25 Score=24.79 Aligned_cols=37 Identities=22% Similarity=0.341 Sum_probs=28.0
Q ss_pred HHHhHHHHHHHHHHHHHcCCCc---------HHHHHHHHHHhcCch
Q 031846 43 AKEYFNKATLYFQQAVDEEPSN---------ELYQKSLEVAAKAPE 79 (152)
Q Consensus 43 A~~~~ekA~~~FqkAleldP~N---------e~YrkaLe~~~kape 79 (152)
.++.+++|.+|..+||.+|-.| ++|++.++-..+...
T Consensus 9 ik~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~ 54 (89)
T 3eab_A 9 VRVFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIA 54 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcC
Confidence 4679999999999999888763 478888766555443
No 261
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=49.68 E-value=22 Score=33.23 Aligned_cols=43 Identities=12% Similarity=0.019 Sum_probs=36.3
Q ss_pred HHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHhc
Q 031846 23 LWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAK 76 (152)
Q Consensus 23 ~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~~k 76 (152)
|-.||..-.+++ ++++|++||+.+|...=+--..++.||++.+
T Consensus 616 WEiLGlla~RL~-----------h~~EA~~a~~~~l~~RFs~ka~~kLLeiY~~ 658 (754)
T 4gns_B 616 WELLGLIMLRTW-----------HWEDAVACLRTSIVARFDPVSCQQLLKIYLQ 658 (754)
T ss_dssp HHHHHHHHHHTT-----------CHHHHHHHHHHHHSSSCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhC-----------CHHHHHHHHHHHHHhccCHHHHHHHHHHHHh
Confidence 666799888764 9999999999999877666788999999865
No 262
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=47.21 E-value=4 Score=33.82 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=0.0
Q ss_pred HHHHhHHHHHHHHHHHHHcCCCcHH----HHHHHHHHhcCchhhHHH
Q 031846 42 EAKEYFNKATLYFQQAVDEEPSNEL----YQKSLEVAAKAPELHMEI 84 (152)
Q Consensus 42 eA~~~~ekA~~~FqkAleldP~Ne~----YrkaLe~~~kapel~~e~ 84 (152)
+|...|.+|+++|.+|+..+|+... -++.-+-...|-+|-..|
T Consensus 41 eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RAE~LK~~L 87 (257)
T 2ymb_A 41 QALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENIKKYL 87 (257)
T ss_dssp -----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455777788888888888876542 233334444444444333
No 263
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=47.13 E-value=20 Score=24.51 Aligned_cols=25 Identities=16% Similarity=0.135 Sum_probs=21.7
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 41 DEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 41 ~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+..+-.|-|++|.+.|++++|++.
T Consensus 29 ~D~~ESLeVAiqCI~~aF~v~~~d~ 53 (74)
T 2lxb_A 29 EDGADSLNVAMDCISEAFGFEREAV 53 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhh
Confidence 5566788999999999999999884
No 264
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.60 E-value=16 Score=34.77 Aligned_cols=35 Identities=9% Similarity=-0.106 Sum_probs=28.7
Q ss_pred HHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHH
Q 031846 12 ALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 12 AL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkA 57 (152)
.+..-|.++-.-|-+|.+|...| ++++|.+||+||
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~~g-----------e~~~A~~~F~ka 868 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLKSK-----------EAVKAVRCFKTT 868 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHTC
T ss_pred HhhhccCCcHHHHHHHHHHHhcC-----------CHHHHHHHHHHH
Confidence 34456777777899999999754 999999999998
No 265
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=45.66 E-value=12 Score=25.78 Aligned_cols=10 Identities=20% Similarity=0.521 Sum_probs=8.8
Q ss_pred ccCCCchhhh
Q 031846 113 KKSSDLKYDI 122 (152)
Q Consensus 113 k~~sd~~ydv 122 (152)
++.++|.||.
T Consensus 7 ~~~dpF~YDY 16 (74)
T 2zxe_G 7 DNDERFTYDY 16 (74)
T ss_dssp TCGGGGCCCH
T ss_pred CCCCCcccch
Confidence 7889999994
No 266
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=45.20 E-value=16 Score=26.28 Aligned_cols=25 Identities=8% Similarity=0.197 Sum_probs=18.9
Q ss_pred HHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031846 44 KEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 44 ~~~~ekA~~~FqkAleldP~Ne~YrkaLe~~ 74 (152)
.+.||+||+|.++|... ..+++++.
T Consensus 28 ~gkydeAIech~kAa~y------L~eAmklt 52 (97)
T 2crb_A 28 AGKYEEAISCHRKATTY------LSEAMKLT 52 (97)
T ss_dssp TTCHHHHHHHHHHHHHH------HHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHH------HHHHHHhh
Confidence 46999999999999853 44566554
No 267
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=44.23 E-value=51 Score=22.17 Aligned_cols=30 Identities=13% Similarity=0.133 Sum_probs=24.8
Q ss_pred HhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 25 CLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 25 nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+|..+...| ++++|+.+|=+||..-|.-.
T Consensus 22 ~~GE~L~~~g-----------~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 22 QLGEELLAQG-----------DYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHHTT-----------CHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHHCC-----------CHHHHHHHHHHHHHHcCCHH
Confidence 5788877654 79999999999999999753
No 268
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=49.11 E-value=5.1 Score=22.42 Aligned_cols=15 Identities=33% Similarity=0.408 Sum_probs=11.6
Q ss_pred hhHHHHHHHHHHHHH
Q 031846 123 FGWVILAVGIVAWVG 137 (152)
Q Consensus 123 ~gw~il~~~iv~wv~ 137 (152)
-||+|++|.+-+-+|
T Consensus 2 Ng~l~iavvlGa~~G 16 (26)
T 2ls4_A 2 NGYLCIAVAAGAGTG 16 (26)
Confidence 389999998776665
No 269
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.97 E-value=28 Score=31.46 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhcCCCC-------hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031846 2 ILDAISKLEEALMVSPNR-------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~-------~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne 65 (152)
|+.|.....++. .|.+ ..-+|.+|..+..+ .+|.+|.+||..|+..-|.+.
T Consensus 247 y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q-----------~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 247 VDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQ-----------LDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp STTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCcch
Confidence 455666666664 3432 23367789999864 599999999999999988653
No 270
>4asv_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; chaperone, membrane, tail-anchored, post-translational targe; NMR {Saccharomyces cerevisiae} PDB: 4asw_A
Probab=39.92 E-value=22 Score=25.36 Aligned_cols=26 Identities=15% Similarity=0.104 Sum_probs=22.3
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031846 41 DEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 41 ~eA~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+..+-.|-|++|.+.|++++|++..
T Consensus 41 ~D~~ESLEVAIqCI~~AF~Vd~~D~~ 66 (92)
T 4asv_A 41 EDGADSLNVAMDCISEAFGFEREAVS 66 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 55667889999999999999998854
No 271
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=39.88 E-value=63 Score=26.76 Aligned_cols=23 Identities=17% Similarity=0.034 Sum_probs=20.8
Q ss_pred HHHhHHHHHHHHHHHHHcCCCcH
Q 031846 43 AKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 43 A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+.+++++|+...++++.++|-+|
T Consensus 183 ~~g~~~~a~~~l~~~~~~~P~~E 205 (388)
T 2ff4_A 183 ACGRASAVIAELEALTFEHPYRE 205 (388)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HCCCHHHHHHHHHHHHHhCCCCH
Confidence 34689999999999999999998
No 272
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=39.06 E-value=55 Score=27.69 Aligned_cols=48 Identities=23% Similarity=0.104 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhcCC--------CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 2 ILDAISKLEEALMVSP--------NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~leeAL~idP--------~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
++.-++.|++|+.+=| ++.-|+--|+.+|... ++|++|+++.+++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~-----------~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYH-----------DDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhc-----------ccHHHHHHHHHHHHhC
Confidence 4556778888876533 3455677778888754 4899999999999864
No 273
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=36.33 E-value=7.5 Score=33.10 Aligned_cols=18 Identities=22% Similarity=0.200 Sum_probs=0.0
Q ss_pred HhHHHHHHHHHHHHHcCC
Q 031846 45 EYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 45 ~~~ekA~~~FqkAleldP 62 (152)
+.+++|+++.++|++.|-
T Consensus 6 ~~~~~A~~~~~~Av~~D~ 23 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDK 23 (444)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 356677777777777764
No 274
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=34.44 E-value=23 Score=24.17 Aligned_cols=16 Identities=25% Similarity=0.661 Sum_probs=14.0
Q ss_pred HhHHHHHHHHHHHHHc
Q 031846 45 EYFNKATLYFQQAVDE 60 (152)
Q Consensus 45 ~~~ekA~~~FqkAlel 60 (152)
++||.|+.||+.+++.
T Consensus 26 GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 26 GNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHH
Confidence 5999999999998864
No 275
>1v54_D Cytochrome C oxidase subunit IV isoform 1; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.1.1 PDB: 1oco_D* 1occ_D* 1ocz_D* 1ocr_D* 1v55_D* 2dyr_D* 2dys_D* 2eij_D* 2eik_D* 2eil_D* 2eim_D* 2ein_D* 2occ_D* 2ybb_O* 2zxw_D* 3abk_D* 3abl_D* 3abm_D* 3ag1_D* 3ag2_D* ...
Probab=34.27 E-value=28 Score=26.53 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=16.7
Q ss_pred hhhHHHHHHHHHHHHHh-hhcCC
Q 031846 122 IFGWVILAVGIVAWVGF-AKSHM 143 (152)
Q Consensus 122 v~gw~il~~~iv~wv~~-a~~~~ 143 (152)
|+|.|++.+||-+|+-+ -|..+
T Consensus 81 v~g~v~~~i~~s~~~f~~~r~~v 103 (147)
T 1v54_D 81 VVGAAMFFIGFTALLLIWEKHYV 103 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 89999999998888643 45554
No 276
>1wwp_A Hypothetical protein TTHA0636; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 2.11A {Thermus thermophilus HB8}
Probab=34.27 E-value=59 Score=22.76 Aligned_cols=47 Identities=11% Similarity=-0.031 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHcCCCcHHHHHHH-HHHhcCchhhHHHHHhhh-ccCC
Q 031846 47 FNKATLYFQQAVDEEPSNELYQKSL-EVAAKAPELHMEIHKHGL-GQQT 93 (152)
Q Consensus 47 ~ekA~~~FqkAleldP~Ne~YrkaL-e~~~kapel~~e~~~~~~-~q~~ 93 (152)
+++|+.-++++++.+|.++.++.++ ..++-+.|+=-.+.++.+ ...+
T Consensus 2 ~~~al~~L~e~~~~~~~~~~~~dg~iq~fe~t~Elawk~~k~~l~~~~g 50 (119)
T 1wwp_A 2 AEKALATLKELAFLEDPSPVERDAAIQRFEYTFEAFWKALQAYLREKEG 50 (119)
T ss_dssp HHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 6788999999999988888888776 566888999899999888 7664
No 277
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=33.97 E-value=26 Score=29.50 Aligned_cols=40 Identities=18% Similarity=0.124 Sum_probs=23.4
Q ss_pred hHHHHHhHHHHHhcccCCCC-----hHHHHHhHHHHHHHHHHHHH
Q 031846 20 HDTLWCLGNAHTSHAFLTPD-----QDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 20 ~dA~~nLGnAy~~~g~l~pd-----~~eA~~~~ekA~~~FqkAle 59 (152)
.-.+||+|.+|+.+|-..+. ...|-..|.+|.-+|+-..+
T Consensus 117 a~VLfNiaal~s~~a~~~~r~~~~glK~A~~~fq~AAG~f~~l~~ 161 (363)
T 3rau_A 117 ACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLRE 161 (363)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999887643221 12233455555555554444
No 278
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=33.71 E-value=57 Score=26.29 Aligned_cols=65 Identities=22% Similarity=0.177 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHH----HHHcC--CCcHHHHHH
Q 031846 2 ILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQ----AVDEE--PSNELYQKS 70 (152)
Q Consensus 2 ieeAIs~leeAL~-----idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~Fqk----Aleld--P~Ne~Yrka 70 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -|..++.++|+..-++ |+..= -+.+.|+.+
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthP---irLgLaLN~SVF~----yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDs 218 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHP---IRLGLALNFSVFY----YEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDS 218 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCH---HHHHHHHHHHHHH----HHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCCc---HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHH
Confidence 4678888888884 677785 5577776322122 1233456666554444 44421 234567777
Q ss_pred HHH
Q 031846 71 LEV 73 (152)
Q Consensus 71 Le~ 73 (152)
..+
T Consensus 219 tlI 221 (234)
T 2br9_A 219 TLI 221 (234)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 279
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=33.56 E-value=1.9e+02 Score=23.28 Aligned_cols=77 Identities=18% Similarity=0.179 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------H
Q 031846 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE----------------L 66 (152)
Q Consensus 3 eeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne----------------~ 66 (152)
..|+..|..||.-+|-++.-....=..|.. .+.+ +--=.+..|+.....||+-. .
T Consensus 102 r~Ale~y~~ALq~~pp~~~~il~aLk~yir--------ae~K-DR~Hti~hy~Hv~~~dpe~A~~~k~~v~~hL~~id~r 172 (211)
T 3umh_A 102 RLALENYITALQAVPPRPRHVFNMLKKYVR--------AEQK-DRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 172 (211)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHH--------HHHH-HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHH--------HHHH-HHHhHHHHHHHHHcCCHHHHHhcchHHHHHHHHHHHH
Confidence 468899999998777764443333333332 1122 33347888888888888653 3
Q ss_pred HHHHHHHHhcCchhhHHHHHhh
Q 031846 67 YQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 67 YrkaLe~~~kapel~~e~~~~~ 88 (152)
-..+|.+...-|.|..+|+..+
T Consensus 173 ~NqsL~lL~~~P~l~~~i~~~~ 194 (211)
T 3umh_A 173 MNQSLSLLYNVPAVAEEIQDEV 194 (211)
T ss_dssp HHHHHHGGGGSHHHHHHHHHHH
T ss_pred HhHhHHHHHhCcHHHHHHHHHH
Confidence 5567899999999999999877
No 280
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=33.08 E-value=23 Score=31.04 Aligned_cols=32 Identities=16% Similarity=0.106 Sum_probs=27.2
Q ss_pred HHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-CCCc
Q 031846 22 TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-EPSN 64 (152)
Q Consensus 22 A~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-dP~N 64 (152)
-+|.+|..+... ++|.+|.++|..|++. -|.+
T Consensus 222 Y~YYlGr~~~~~-----------~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 222 YRYLLGRYYLLN-----------SQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHHHHCC
T ss_pred eeHHHHHHHHHH-----------ccHHHHHHHHHHHHHhcCCcc
Confidence 378999999864 5999999999999999 7754
No 281
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=33.00 E-value=34 Score=28.83 Aligned_cols=38 Identities=13% Similarity=-0.030 Sum_probs=22.2
Q ss_pred hHHHHHhHHHHHhcccCCCCh-----HHHHHhHHHHHHHHHHH
Q 031846 20 HDTLWCLGNAHTSHAFLTPDQ-----DEAKEYFNKATLYFQQA 57 (152)
Q Consensus 20 ~dA~~nLGnAy~~~g~l~pd~-----~eA~~~~ekA~~~FqkA 57 (152)
.-.+||+|.+|+.+|...... ..|-..|.+|.-+|+-.
T Consensus 142 a~VLfNlgal~s~~A~~~~r~~~eglK~A~~~fq~AAG~f~~l 184 (380)
T 3c3r_A 142 SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHI 184 (380)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 457899999998876543211 22334555555555543
No 282
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=32.12 E-value=88 Score=24.47 Aligned_cols=36 Identities=17% Similarity=0.046 Sum_probs=26.6
Q ss_pred hcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 14 MVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 14 ~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
.-++-+++-++-|++||.+.| +-.+|.+...+|-+-
T Consensus 119 ~n~~~~~~~l~kia~Ay~Klg-----------~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 119 KNNEVSASILVAIANALRRVG-----------DERDATTLLIEACKK 154 (172)
T ss_dssp --CCSCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHT
T ss_pred ccCCCChHHHHHHHHHHHHhc-----------chhhHHHHHHHHHHh
Confidence 335567999999999999976 667777777777653
No 283
>1jog_A Hypothetical protein HI0074; structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: a.24.16.2
Probab=31.94 E-value=28 Score=25.71 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=39.4
Q ss_pred HhHHHHHHHHHHHHHc-----------CCCcHHHHHHH-HHHhcCchhhHHHHHhhhccCCC
Q 031846 45 EYFNKATLYFQQAVDE-----------EPSNELYQKSL-EVAAKAPELHMEIHKHGLGQQTM 94 (152)
Q Consensus 45 ~~~ekA~~~FqkAlel-----------dP~Ne~YrkaL-e~~~kapel~~e~~~~~~~q~~~ 94 (152)
++|++|+.-++++++. +|.|+.++.++ ..++-+.|+=-.+.++.+...+.
T Consensus 9 ~~~~kal~~L~e~~~~~~~~~~~~~~~~~~~~~~~dg~iq~fe~t~Elawk~~k~~L~~~g~ 70 (146)
T 1jog_A 9 NVLDAAFYSLEQTVVQISDRNWFDMQPSIVQDTLIAGAIQKFEFVYELSLKMMKRQLQQDAI 70 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5888999999999887 34567777766 56688899999999988876653
No 284
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=31.86 E-value=35 Score=23.25 Aligned_cols=20 Identities=15% Similarity=0.089 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhcCCCChH
Q 031846 2 ILDAISKLEEALMVSPNRHD 21 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~d 21 (152)
+|-||+++++|+.++|++..
T Consensus 35 LeVAiqCI~~aF~v~~~d~~ 54 (74)
T 2lxb_A 35 LNVAMDCISEAFGFEREAVS 54 (74)
T ss_dssp HHHHHHHHHHHHTCCTTTHH
T ss_pred HHHHHHHHHHHhCCCchhhH
Confidence 57899999999999999854
No 285
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=31.61 E-value=23 Score=29.92 Aligned_cols=40 Identities=20% Similarity=0.108 Sum_probs=25.0
Q ss_pred ChHHHHHhHHHHHhcccCCC--ChHHHHHhHHHHHHHHHHHH
Q 031846 19 RHDTLWCLGNAHTSHAFLTP--DQDEAKEYFNKATLYFQQAV 58 (152)
Q Consensus 19 ~~dA~~nLGnAy~~~g~l~p--d~~eA~~~~ekA~~~FqkAl 58 (152)
..-.+||+|.+|+.+|.... +...|-..|.+|.-+|+-.-
T Consensus 122 ~a~vLfNlaal~s~~A~~~~r~~lk~A~~~fq~AAG~f~~l~ 163 (392)
T 1zb1_A 122 KSCTLFNIAVIFTQIARENINEDYKNSIANLTKAFSCFEYLS 163 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 34579999999987764221 33444456666666666554
No 286
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=31.60 E-value=92 Score=26.35 Aligned_cols=49 Identities=14% Similarity=0.040 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhcCC--------CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC
Q 031846 2 ILDAISKLEEALMVSP--------NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 2 ieeAIs~leeAL~idP--------~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld 61 (152)
++.-++.|++|+.+=| ++.-|+-.|+.+|... ++|++|+++.+++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~-----------~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNM-----------GEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhCC
Confidence 4556788888887544 3445677778888754 48999999999999754
No 287
>3dfb_A Metal-binding protein SMBP; four helical bundle, copper, periplasm; 1.90A {Nitrosomonas europaea} PDB: 3u8v_A
Probab=31.06 E-value=57 Score=23.17 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkA 57 (152)
+++||..|++||+ .-++|.+ +.|...-++|+..|+++
T Consensus 52 ~~~aIkhLeeAI~--------hg~~gha-----------d~Atkha~eAl~Hlk~~ 88 (93)
T 3dfb_A 52 VGHGIKHLEDAIK--------HGEEGHV-----------GVATKHAQEAIEHLRAS 88 (93)
T ss_dssp HHHHHHHHHHHHH--------HHHTTCH-----------HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH--------hcccccH-----------HHHHHHHHHHHHHHHHh
Confidence 5677888888875 3444444 33556778888888774
No 288
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=30.65 E-value=84 Score=26.58 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCC--------CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 2 ILDAISKLEEALMVSP--------NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~leeAL~idP--------~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
++.-++.|++|+.+=| ++.-|+--|+.+|... ++|++|+++.+++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~-----------~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYK-----------GEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHhc
Confidence 3556777888876433 3455677778887753 5899999999999863
No 289
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=30.58 E-value=1.6e+02 Score=25.29 Aligned_cols=57 Identities=21% Similarity=0.232 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcc-------------cCCCChHHHHHhHHHHHHHHHHHHH
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHA-------------FLTPDQDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g-------------~l~pd~~eA~~~~ekA~~~FqkAle 59 (152)
|+.|++..+--|+..|++....+-++.++...- --.|-..-|+...++|..||+ +|.
T Consensus 101 FDaALERielGLe~~p~s~~L~la~SKILlqrI~~~~~~~s~eE~~~~~p~~~ta~kmi~qa~~~l~-~La 170 (346)
T 3qtm_A 101 IDAAIERAQLGLDAPGNESRLFLALARAYLEKVRVLVWRHDNEESLANIPVTQLVNPYIEKAIQYLR-PLA 170 (346)
T ss_dssp HHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHhhhhhCCCChhHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHH-HHH
Confidence 688999999999999999988888888775430 001223345668888999998 444
No 290
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=29.94 E-value=70 Score=26.25 Aligned_cols=50 Identities=20% Similarity=0.141 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHH
Q 031846 2 ILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAV 58 (152)
Q Consensus 2 ieeAIs~leeAL~-----idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAl 58 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -|..++.++|+..-++|+
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthP---irLGLaLNfSVFy----YEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHP---IRLGLALNFSVFY----YEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCH---HHHHHHHHHHHHH----HHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCc---HHHHHHHHHHHHH----HHHccCHHHHHHHHHHHH
Confidence 4678888998884 677785 5678776322122 123345555555444444
No 291
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.15 E-value=19 Score=30.44 Aligned_cols=36 Identities=11% Similarity=0.045 Sum_probs=25.1
Q ss_pred CCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCC
Q 031846 17 PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 17 P~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~ 63 (152)
..-.+++..||.-|.+.| ++++|+++|.++.+.-..
T Consensus 128 ~e~~~~~~~la~~~~~~G-----------d~~~A~~~~~~~~~~~~~ 163 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIG-----------DKDNAEKTLGKSLSKAIS 163 (429)
T ss_dssp CCCSSCCHHHHHHHHHHC-----------CCTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhcCC
Confidence 334567778888887654 777888888877765543
No 292
>2y69_D Cytochrome C oxidase subunit 4 isoform 1; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=29.01 E-value=38 Score=26.40 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=17.1
Q ss_pred hhhhHHHHHHHHHHHHHh-hhcCC
Q 031846 121 DIFGWVILAVGIVAWVGF-AKSHM 143 (152)
Q Consensus 121 dv~gw~il~~~iv~wv~~-a~~~~ 143 (152)
-|+|.|++.+||-+|+-+ -|..+
T Consensus 102 ~V~ggv~~~i~~s~~~f~~~r~~v 125 (169)
T 2y69_D 102 TVVGAAMFFIGFTALLLIWEKHYV 125 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 389999999998888644 45554
No 293
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=28.59 E-value=52 Score=27.65 Aligned_cols=40 Identities=15% Similarity=0.022 Sum_probs=23.4
Q ss_pred hHHHHHhHHHHHhcccC-------CC-ChHHHHHhHHHHHHHHHHHHH
Q 031846 20 HDTLWCLGNAHTSHAFL-------TP-DQDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 20 ~dA~~nLGnAy~~~g~l-------~p-d~~eA~~~~ekA~~~FqkAle 59 (152)
.-.+||+|.+|+.++-. +. +...|-..|.+|..+|+-..+
T Consensus 114 a~VLfNiaal~sq~A~~~~~~~r~~~e~lK~A~~~fq~AAG~f~~l~~ 161 (376)
T 3r9m_A 114 ISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKE 161 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999999876532 11 123344456666666655443
No 294
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=28.43 E-value=2.3e+02 Score=22.82 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCcH----------------H
Q 031846 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE----------------L 66 (152)
Q Consensus 3 eeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~Ne----------------~ 66 (152)
..|...|..||..+|-++.-..+.=..|.. .+.+ +--=.+..|+.....||+-. .
T Consensus 109 r~Ale~y~~ALq~~pP~~~~vl~aLk~yir--------ae~K-DR~Htl~hf~Hv~~~dpe~A~~~k~~vl~hL~~Id~r 179 (219)
T 3pmr_A 109 RAALEGFLAALQADPPQAERVLLALRRYLR--------AEQK-EQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEER 179 (219)
T ss_dssp HHHHHHHHHHHTSSSCCHHHHHHHHHHHHH--------HHHH-HHHHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHH--------HHHH-HHHhHHHHHHHHHccCHHHHhhcchHHHHHHHHHHHH
Confidence 468999999999886654444333333442 1222 44447889999999998653 3
Q ss_pred HHHHHHHHhcCchhhHHHHHhh
Q 031846 67 YQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 67 YrkaLe~~~kapel~~e~~~~~ 88 (152)
-..+|.+...-|+|..+|+..+
T Consensus 180 ~NqSL~lL~~~P~l~~~i~~~i 201 (219)
T 3pmr_A 180 VNQSLGLLDQNPHLAQELRPQI 201 (219)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHH
T ss_pred HhhhHHHHHcCchHHHHHhHHH
Confidence 5567899999999998888765
No 295
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=28.02 E-value=37 Score=30.95 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=13.9
Q ss_pred hHHHHHhHHHHHHHHHHHHH
Q 031846 40 QDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 40 ~~eA~~~~ekA~~~FqkAle 59 (152)
.+.|.+.-++|++|||+|++
T Consensus 441 n~~a~~yA~kAi~~Y~~Ai~ 460 (526)
T 2wb7_A 441 NENAIEYAQGAIDEYKAAIN 460 (526)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 35566677777777777775
No 296
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=27.97 E-value=62 Score=19.40 Aligned_cols=16 Identities=25% Similarity=0.461 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHHHHcC
Q 031846 46 YFNKATLYFQQAVDEE 61 (152)
Q Consensus 46 ~~ekA~~~FqkAleld 61 (152)
-|+||...|+.||+.+
T Consensus 17 ayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 17 AYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5999999999999865
No 297
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=26.63 E-value=2.1e+02 Score=25.77 Aligned_cols=71 Identities=13% Similarity=0.172 Sum_probs=46.9
Q ss_pred HHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc------CC-CcHHHHHHHH
Q 031846 5 AISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE------EP-SNELYQKSLE 72 (152)
Q Consensus 5 AIs~leeAL~-----idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel------dP-~Ne~YrkaLe 72 (152)
++..|++|+. .+-.+---|-+||--+..++ +|.+|+.++-.|-+. .- |-|.|++.++
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~-----------~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~e 351 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNR-----------NVREALQAWADTATVIQDYNYCREDEEIYKEFFE 351 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhh-----------hHHHHHHHhhhhhhhhhhcccccchHHHHHHHHH
Confidence 5667777775 34456667888888888754 788888888777442 22 2368988777
Q ss_pred HHhcCchhhHHHHHhhh
Q 031846 73 VAAKAPELHMEIHKHGL 89 (152)
Q Consensus 73 ~~~kapel~~e~~~~~~ 89 (152)
++. ||-+.+-|...
T Consensus 352 Ian---elip~~lk~~~ 365 (489)
T 4gq4_A 352 VAN---DVIPNLLKEAA 365 (489)
T ss_dssp HHH---THHHHHHHHHH
T ss_pred HHH---HhhhHHHHHhh
Confidence 764 55566665443
No 298
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=26.42 E-value=75 Score=22.42 Aligned_cols=29 Identities=14% Similarity=0.103 Sum_probs=24.0
Q ss_pred HhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCCCc
Q 031846 25 CLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 25 nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP~N 64 (152)
.+|..+... ++++.|+.+|=+||..-|.-
T Consensus 25 ~lGE~L~~~-----------g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 25 QLGEELLAQ-----------GDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHH-----------TCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHC-----------CCHHHHHHHHHHHHHHcCCH
Confidence 577777754 47999999999999999874
No 299
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=26.19 E-value=1.7e+02 Score=26.58 Aligned_cols=70 Identities=13% Similarity=0.199 Sum_probs=47.4
Q ss_pred HHHHHHHHHhc-----CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-------CCCcHHHHHHHH
Q 031846 5 AISKLEEALMV-----SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-------EPSNELYQKSLE 72 (152)
Q Consensus 5 AIs~leeAL~i-----dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-------dP~Ne~YrkaLe 72 (152)
++..|.+|+.. +-.|---|-+||.-|++++ ++.+|+.++-.|-+. --|.|.|++-+|
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~-----------~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~e 366 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNR-----------NVREALQAWADTATVIQDYNYCREDEEIYKEFFE 366 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcc-----------hHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 46667777753 4456667888988777654 777788777776543 123378998888
Q ss_pred HHhcCchhhHHHHHhh
Q 031846 73 VAAKAPELHMEIHKHG 88 (152)
Q Consensus 73 ~~~kapel~~e~~~~~ 88 (152)
++. ||-+++.|.-
T Consensus 367 IAn---eliP~~~k~~ 379 (550)
T 3u84_A 367 VAN---DVIPNLLKEA 379 (550)
T ss_dssp HHH---THHHHHHHHH
T ss_pred HHH---HhhhHHHHHh
Confidence 764 6667777744
No 300
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=25.66 E-value=95 Score=26.47 Aligned_cols=47 Identities=15% Similarity=0.005 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhc-------------CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 3 LDAISKLEEALMV-------------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 3 eeAIs~leeAL~i-------------dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
+.-++.|++|+.+ .+++.-|+--|+.+|... +++++|+++.+++++.
T Consensus 161 ~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~-----------~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 161 QQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLT-----------GQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhc
Confidence 4456666666642 233455677778888754 4999999999999864
No 301
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=25.01 E-value=1.3e+02 Score=25.80 Aligned_cols=48 Identities=27% Similarity=0.320 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhcCC-----------CChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 2 ILDAISKLEEALMVSP-----------NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~leeAL~idP-----------~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
++.-++.|++|+..=| ++.-|+--|+.+|... ++|++|+++.++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~-----------~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYA-----------RQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHhc
Confidence 4456777888876433 3345677778888764 4999999999999975
No 302
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=24.73 E-value=1.6e+02 Score=22.61 Aligned_cols=13 Identities=38% Similarity=0.347 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHh
Q 031846 2 ILDAISKLEEALM 14 (152)
Q Consensus 2 ieeAIs~leeAL~ 14 (152)
|-.|...|++||+
T Consensus 79 yrrA~~~y~qALq 91 (167)
T 3ffl_A 79 YRNAVSKYTMALQ 91 (167)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5678889999874
No 303
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=23.87 E-value=1.1e+02 Score=25.20 Aligned_cols=65 Identities=22% Similarity=0.200 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHh----cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc-----C-CCcHHHHHHH
Q 031846 2 ILDAISKLEEALM----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----E-PSNELYQKSL 71 (152)
Q Consensus 2 ieeAIs~leeAL~----idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel-----d-P~Ne~YrkaL 71 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -|..++.++|+..-++|++. | -+.+.|+.+.
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthP---irLGLaLNfSVFy----YEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDst 244 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHP---IRLGLALNFSVFH----YEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDST 244 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHHHH----HHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc---HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHH
Confidence 4678889999986 566674 4588877322222 13345666666655555542 2 1345677764
Q ss_pred HH
Q 031846 72 EV 73 (152)
Q Consensus 72 e~ 73 (152)
.+
T Consensus 245 lI 246 (260)
T 2npm_A 245 LI 246 (260)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 304
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1
Probab=23.76 E-value=30 Score=25.34 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=23.0
Q ss_pred HHHHHcCCCcHHHHHHHHHHhcCchhhHHHHHhhhcc
Q 031846 55 QQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQ 91 (152)
Q Consensus 55 qkAleldP~Ne~YrkaLe~~~kapel~~e~~~~~~~q 91 (152)
++.|++||+|++.++.++. +..+.=..+-.++..|
T Consensus 67 k~~LEINp~HplIk~L~~~--~~~~~~k~l~~lLyd~ 101 (126)
T 1sf8_A 67 KYIFELNPDHVLVKRAADT--EDEAKFSEWVELLLDQ 101 (126)
T ss_dssp CCEEEECTTSHHHHHHHHC--CSHHHHHHHHHHHHHH
T ss_pred CeeeeECCCCHHHHHHHHh--cChHHHHHHHHHHHHH
Confidence 5789999999999998753 3333334455555433
No 305
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=23.62 E-value=2.5e+02 Score=25.03 Aligned_cols=71 Identities=23% Similarity=0.205 Sum_probs=48.1
Q ss_pred HHHHHHHHHhc-----CCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcC-------CCcHHHHHHHH
Q 031846 5 AISKLEEALMV-----SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE-------PSNELYQKSLE 72 (152)
Q Consensus 5 AIs~leeAL~i-----dP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleld-------P~Ne~YrkaLe 72 (152)
++..|.+|+.. +-.|---|-+||.-|++.+ ++.+|+.++-.|-+.= -|.|.|++-+|
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~-----------~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~e 344 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKK-----------KYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHE 344 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcc-----------hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Confidence 56677777753 4456667888988777654 7888888887775431 12368988887
Q ss_pred HHhcCchhhHHHHHhhh
Q 031846 73 VAAKAPELHMEIHKHGL 89 (152)
Q Consensus 73 ~~~kapel~~e~~~~~~ 89 (152)
++. ||-+++.|--+
T Consensus 345 IAn---eliP~~~k~a~ 358 (472)
T 3re2_A 345 IAN---DLIPNILKDAV 358 (472)
T ss_dssp HHH---THHHHHHHHHH
T ss_pred HHH---HHhhHHHHhhh
Confidence 764 67788877544
No 306
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=23.61 E-value=1.2e+02 Score=24.61 Aligned_cols=65 Identities=26% Similarity=0.249 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHH----HHHHHH-cCC-CcHHHHHH
Q 031846 2 ILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLY----FQQAVD-EEP-SNELYQKS 70 (152)
Q Consensus 2 ieeAIs~leeAL~-----idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~----FqkAle-ldP-~Ne~Yrka 70 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -|..++.++|+.. |+.|+. +|- +.+.|+.+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthP---irLGLaLNfSVFy----yEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDs 221 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNP---IRLGLALNFSVFH----YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDS 221 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCH---HHHHHHHHHHHHH----HHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCc---HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHH
Confidence 3667788888874 778885 5677776322122 1334456666554 555543 343 34578877
Q ss_pred HHH
Q 031846 71 LEV 73 (152)
Q Consensus 71 Le~ 73 (152)
.-+
T Consensus 222 tlI 224 (236)
T 3iqu_A 222 TLI 224 (236)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 307
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=23.22 E-value=1e+02 Score=24.90 Aligned_cols=22 Identities=18% Similarity=0.221 Sum_probs=19.3
Q ss_pred HHhHHHHHHHHHHHHHcCCCcH
Q 031846 44 KEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 44 ~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++...|++||..||..+|-|.
T Consensus 105 n~rrr~Ale~y~~ALq~~pP~~ 126 (219)
T 3pmr_A 105 NDQRRAALEGFLAALQADPPQA 126 (219)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCH
T ss_pred HHHHHHHHHHHHHHHhcCCCCh
Confidence 3578899999999999998884
No 308
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=23.22 E-value=56 Score=26.86 Aligned_cols=43 Identities=19% Similarity=0.346 Sum_probs=32.5
Q ss_pred HHhHHHHHHHHHHHHHcCCCcH-HHHHHHHHHhcCchhhHHHHH
Q 031846 44 KEYFNKATLYFQQAVDEEPSNE-LYQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 44 ~~~~ekA~~~FqkAleldP~Ne-~YrkaLe~~~kapel~~e~~~ 86 (152)
++.|++|.+.|+|-+..+|.|. +=++.+.+..+---.|+-||+
T Consensus 127 k~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~~H~~lqn 170 (235)
T 3bu8_A 127 NKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNLAHPVIQN 170 (235)
T ss_dssp TTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCTTSHHHHT
T ss_pred hcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCcccHHHHh
Confidence 4689999999999999988887 555555666555556777766
No 309
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=23.21 E-value=1.5e+02 Score=25.23 Aligned_cols=12 Identities=25% Similarity=0.116 Sum_probs=8.5
Q ss_pred CHHHHHHHHHHH
Q 031846 1 MILDAISKLEEA 12 (152)
Q Consensus 1 mieeAIs~leeA 12 (152)
+++.|+.+|.++
T Consensus 696 ~~~~A~~~y~~~ 707 (814)
T 3mkq_A 696 NFKLAIEAFTNA 707 (814)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHc
Confidence 367788888775
No 310
>1s6c_B Potassium voltage-gated channel subfamily D membe; EF-hand, transport protein; 2.00A {Rattus norvegicus}
Probab=23.11 E-value=14 Score=21.32 Aligned_cols=13 Identities=31% Similarity=0.790 Sum_probs=2.8
Q ss_pred HHHHHHhhhcCCC
Q 031846 132 IVAWVGFAKSHMP 144 (152)
Q Consensus 132 iv~wv~~a~~~~p 144 (152)
.++|+=+|...+|
T Consensus 16 ~igw~P~a~~~~p 28 (30)
T 1s6c_B 16 AIGWMPVASGPMP 28 (30)
T ss_dssp HHTTCC-------
T ss_pred cccccccccCCCC
Confidence 3445444444443
No 311
>1skh_A Major prion protein 2; coil-helix-coil, unknown function; NMR {Bos taurus}
Probab=22.49 E-value=46 Score=19.18 Aligned_cols=20 Identities=35% Similarity=0.836 Sum_probs=14.1
Q ss_pred hhhhHHHHHHHHHHH--HHhhhc
Q 031846 121 DIFGWVILAVGIVAW--VGFAKS 141 (152)
Q Consensus 121 dv~gw~il~~~iv~w--v~~a~~ 141 (152)
-+.-|+ |+.-++.| ||+.|.
T Consensus 5 ~~~cwi-lvLfva~wsdvglcKK 26 (30)
T 1skh_A 5 KIGSWI-LVLFVAMWSDVGLCKK 26 (30)
T ss_dssp TTTTHH-HHHHHHHHHHHTTSSS
T ss_pred cccHHH-HHHHHHHHhHHHHhhc
Confidence 345564 55667889 899886
No 312
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=21.43 E-value=1.3e+02 Score=24.50 Aligned_cols=65 Identities=20% Similarity=0.240 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHH----HHHHHH-cCC-CcHHHHHH
Q 031846 2 ILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLY----FQQAVD-EEP-SNELYQKS 70 (152)
Q Consensus 2 ieeAIs~leeAL~-----idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~----FqkAle-ldP-~Ne~Yrka 70 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -|..++.++|+.. |+.|+. +|- +.+.|+.+
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthP---irLGLaLNfSVFy----YEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDs 219 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHP---IRLGLALNYSVFY----YEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDS 219 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCH---HHHHHHHHHHHHH----HHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCc---HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHH
Confidence 3667888888864 778885 5678776321121 1333456665554 555544 222 33467766
Q ss_pred HHH
Q 031846 71 LEV 73 (152)
Q Consensus 71 Le~ 73 (152)
.-+
T Consensus 220 tlI 222 (248)
T 3uzd_A 220 TLI 222 (248)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 313
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=20.95 E-value=2.3e+02 Score=22.30 Aligned_cols=52 Identities=8% Similarity=0.100 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHcCC
Q 031846 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 2 ieeAIs~leeAL~idP~~~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAleldP 62 (152)
..++...|+....-.=..--|+|...-|.. -|..++|++|.+.|++.++-+=
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~---------lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKL---------LENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHH---------HHHTTCHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHH---------HHHcCCHHHHHHHHHHHHHcCC
Confidence 446777777776655555555555555543 2456799999999999998763
No 314
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=20.49 E-value=1.2e+02 Score=24.35 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=19.5
Q ss_pred HHhHHHHHHHHHHHHHcCCCcH
Q 031846 44 KEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 44 ~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++...|++||..||..+|-|.
T Consensus 98 n~rrr~Ale~y~~ALq~~pp~~ 119 (211)
T 3umh_A 98 NDRRRLALENYITALQAVPPRP 119 (211)
T ss_dssp HHHHHHHHHHHHHHHTCSSCCH
T ss_pred HHHHHHHHHHHHHHHhcCCCCh
Confidence 3678999999999999999885
No 315
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.31 E-value=1.8e+02 Score=24.52 Aligned_cols=30 Identities=13% Similarity=0.140 Sum_probs=22.8
Q ss_pred hHHHHHhHHHHHhcccCCCChHHHHHhHHHHHHHHHHHHHc
Q 031846 20 HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 20 ~dA~~nLGnAy~~~g~l~pd~~eA~~~~ekA~~~FqkAlel 60 (152)
.-|+-.|+.+|... ++|++|+++.++++..
T Consensus 197 ~aA~allarvyL~~-----------~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQ-----------GNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHhC
Confidence 34666677777654 4899999999999964
No 316
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=20.08 E-value=51 Score=22.52 Aligned_cols=10 Identities=30% Similarity=0.597 Sum_probs=7.9
Q ss_pred ccCCCchhhh
Q 031846 113 KKSSDLKYDI 122 (152)
Q Consensus 113 k~~sd~~ydv 122 (152)
|-.+.|.||.
T Consensus 4 kE~dPF~YDY 13 (72)
T 2jo1_A 4 KEHDPFTYDY 13 (72)
T ss_dssp HHHSGGGCST
T ss_pred ccCCCcccch
Confidence 4678999994
Done!