Query 031849
Match_columns 152
No_of_seqs 149 out of 255
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 09:37:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031849.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031849hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zu2_A Mitochondrial import re 99.9 4.6E-27 1.6E-31 183.5 9.0 89 1-89 61-149 (158)
2 4gco_A Protein STI-1; structur 99.4 1.1E-12 3.6E-17 93.5 9.2 54 1-65 28-81 (126)
3 4gco_A Protein STI-1; structur 99.4 1.1E-12 3.8E-17 93.3 8.6 63 1-74 62-124 (126)
4 4ga2_A E3 SUMO-protein ligase 99.4 3.1E-12 1E-16 92.8 9.6 54 1-65 46-99 (150)
5 1zu2_A Mitochondrial import re 99.4 8.8E-13 3E-17 102.7 6.5 82 1-83 17-123 (158)
6 4gcn_A Protein STI-1; structur 99.3 1E-12 3.4E-17 93.2 4.6 53 1-64 23-75 (127)
7 3gyz_A Chaperone protein IPGC; 99.3 3.7E-12 1.3E-16 95.1 7.3 54 1-65 51-104 (151)
8 1hxi_A PEX5, peroxisome target 99.3 6.8E-12 2.3E-16 88.4 8.0 55 1-66 32-86 (121)
9 3vtx_A MAMA; tetratricopeptide 99.3 1.3E-12 4.4E-17 94.3 3.8 72 2-84 89-174 (184)
10 2kc7_A BFR218_protein; tetratr 99.3 2E-11 7E-16 80.5 8.9 70 1-81 15-91 (99)
11 3upv_A Heat shock protein STI1 99.3 2.1E-11 7.1E-16 83.7 9.0 70 1-81 19-102 (126)
12 3gyz_A Chaperone protein IPGC; 99.3 1.4E-11 4.7E-16 91.9 8.4 63 1-74 85-147 (151)
13 2vgx_A Chaperone SYCD; alterna 99.2 7.3E-11 2.5E-15 85.8 10.1 54 1-65 36-89 (148)
14 2xcb_A PCRH, regulatory protei 99.2 9.3E-11 3.2E-15 83.1 10.4 54 1-65 33-86 (142)
15 3sz7_A HSC70 cochaperone (SGT) 99.2 3.3E-11 1.1E-15 86.6 7.7 54 1-65 26-79 (164)
16 3rkv_A Putative peptidylprolyl 99.2 4.5E-11 1.5E-15 85.8 8.2 64 1-75 78-142 (162)
17 4ga2_A E3 SUMO-protein ligase 99.2 1.2E-11 4E-16 89.7 4.7 80 2-92 13-113 (150)
18 3k9i_A BH0479 protein; putativ 99.2 6E-11 2.1E-15 81.5 7.7 53 2-65 6-61 (117)
19 2l6j_A TPR repeat-containing p 99.2 1.3E-10 4.5E-15 76.5 8.7 53 1-64 19-71 (111)
20 2hr2_A Hypothetical protein; a 99.2 5.2E-11 1.8E-15 92.6 7.6 72 1-83 26-134 (159)
21 2pl2_A Hypothetical conserved 99.2 1.7E-10 5.7E-15 87.6 10.2 90 2-92 55-165 (217)
22 3q49_B STIP1 homology and U bo 99.2 1.5E-10 5E-15 79.2 8.6 72 1-83 24-109 (137)
23 2vgx_A Chaperone SYCD; alterna 99.2 5.8E-11 2E-15 86.3 6.7 57 1-68 70-126 (148)
24 1na3_A Designed protein CTPR2; 99.2 2.5E-10 8.5E-15 72.9 8.8 61 1-72 24-84 (91)
25 3upv_A Heat shock protein STI1 99.2 1.3E-10 4.3E-15 79.7 7.9 64 1-75 53-122 (126)
26 3sz7_A HSC70 cochaperone (SGT) 99.1 6.3E-11 2.1E-15 85.2 6.5 64 1-75 60-125 (164)
27 2xcb_A PCRH, regulatory protei 99.1 6.2E-11 2.1E-15 84.0 6.1 61 1-72 67-127 (142)
28 4gyw_A UDP-N-acetylglucosamine 99.1 1.1E-10 3.7E-15 107.2 9.3 80 2-92 59-159 (723)
29 3k9i_A BH0479 protein; putativ 99.1 1.4E-11 4.8E-16 84.7 2.4 67 1-78 42-111 (117)
30 3vtx_A MAMA; tetratricopeptide 99.1 2.2E-10 7.4E-15 82.5 8.5 58 1-69 122-179 (184)
31 2pl2_A Hypothetical conserved 99.1 1.5E-10 5.1E-15 87.9 7.4 54 1-65 20-73 (217)
32 4gyw_A UDP-N-acetylglucosamine 99.1 2E-10 6.9E-15 105.4 9.1 54 2-66 93-146 (723)
33 2kat_A Uncharacterized protein 99.1 2.1E-10 7.2E-15 77.9 6.9 52 3-65 2-53 (115)
34 3urz_A Uncharacterized protein 99.1 3.3E-10 1.1E-14 85.4 8.7 60 1-71 69-128 (208)
35 3urz_A Uncharacterized protein 99.1 1.5E-10 5E-15 87.4 6.6 77 1-88 19-132 (208)
36 3ma5_A Tetratricopeptide repea 99.1 9.5E-11 3.3E-15 79.6 5.0 53 1-64 22-74 (100)
37 2lni_A Stress-induced-phosphop 99.1 5.7E-10 1.9E-14 74.6 8.5 53 2-65 32-84 (133)
38 2dba_A Smooth muscle cell asso 99.1 8.7E-10 3E-14 75.2 8.9 53 2-65 44-99 (148)
39 3rkv_A Putative peptidylprolyl 99.0 1.9E-10 6.5E-15 82.5 5.2 54 1-65 26-97 (162)
40 1elw_A TPR1-domain of HOP; HOP 99.0 1.7E-09 5.8E-14 70.4 8.8 54 1-65 19-72 (118)
41 1hxi_A PEX5, peroxisome target 99.0 4E-10 1.4E-14 79.3 6.2 54 1-65 66-119 (121)
42 4i17_A Hypothetical protein; T 99.0 4.1E-10 1.4E-14 83.9 6.5 52 2-64 23-75 (228)
43 2kck_A TPR repeat; tetratricop 99.0 2.1E-09 7.3E-14 69.5 9.1 60 1-71 21-82 (112)
44 1elw_A TPR1-domain of HOP; HOP 99.0 1.4E-09 4.6E-14 70.9 8.0 63 1-74 53-115 (118)
45 2xev_A YBGF; tetratricopeptide 99.0 1.8E-09 6.2E-14 73.0 8.7 53 1-64 17-72 (129)
46 2hr2_A Hypothetical protein; a 99.0 2E-10 6.8E-15 89.3 4.2 54 1-65 72-136 (159)
47 2vyi_A SGTA protein; chaperone 99.0 2.8E-09 9.5E-14 70.3 9.1 53 2-65 28-80 (131)
48 2dba_A Smooth muscle cell asso 99.0 2.1E-09 7.2E-14 73.3 8.8 64 1-75 80-143 (148)
49 4gcn_A Protein STI-1; structur 99.0 6.3E-10 2.1E-14 78.7 6.3 61 1-72 57-124 (127)
50 1pc2_A Mitochondria fission pr 99.0 5.4E-10 1.9E-14 86.7 5.9 67 1-78 50-118 (152)
51 4i17_A Hypothetical protein; T 99.0 2.5E-09 8.4E-14 79.7 9.3 54 1-65 57-110 (228)
52 2xev_A YBGF; tetratricopeptide 99.0 1.3E-09 4.6E-14 73.6 7.2 63 1-74 54-119 (129)
53 2fbn_A 70 kDa peptidylprolyl i 99.0 2.3E-09 7.8E-14 79.1 8.6 63 1-74 103-165 (198)
54 1a17_A Serine/threonine protei 99.0 1.8E-09 6E-14 75.0 7.3 53 2-65 29-81 (166)
55 2h6f_A Protein farnesyltransfe 99.0 1.7E-09 5.8E-14 91.6 8.7 53 2-65 148-200 (382)
56 2lni_A Stress-induced-phosphop 99.0 2.7E-09 9.1E-14 71.3 7.7 60 1-71 65-124 (133)
57 2vyi_A SGTA protein; chaperone 98.9 4.7E-09 1.6E-13 69.2 8.8 60 1-71 61-120 (131)
58 2h6f_A Protein farnesyltransfe 98.9 1.3E-09 4.3E-14 92.4 7.3 53 2-65 182-234 (382)
59 1hh8_A P67PHOX, NCF-2, neutrop 98.9 1.2E-09 4E-14 79.9 6.2 54 1-65 52-105 (213)
60 1p5q_A FKBP52, FK506-binding p 98.9 3.4E-09 1.2E-13 86.5 8.8 60 1-71 211-270 (336)
61 1na0_A Designed protein CTPR3; 98.9 8.9E-09 3E-13 67.3 9.1 54 1-65 24-77 (125)
62 3q49_B STIP1 homology and U bo 98.9 1.8E-09 6.2E-14 73.7 5.9 52 1-63 58-109 (137)
63 3bee_A Putative YFRE protein; 98.9 2.2E-09 7.6E-14 74.9 6.3 55 1-66 24-78 (93)
64 1p5q_A FKBP52, FK506-binding p 98.9 4.4E-09 1.5E-13 85.9 8.6 54 1-65 162-230 (336)
65 1a17_A Serine/threonine protei 98.9 8.3E-09 2.8E-13 71.6 8.8 55 1-66 62-116 (166)
66 2e2e_A Formate-dependent nitri 98.9 4.2E-09 1.4E-13 75.7 7.4 52 2-64 60-114 (177)
67 1ihg_A Cyclophilin 40; ppiase 98.9 5.4E-09 1.8E-13 87.5 9.1 68 1-79 288-355 (370)
68 2fbn_A 70 kDa peptidylprolyl i 98.9 7.8E-09 2.7E-13 76.2 8.9 54 1-65 53-122 (198)
69 2c2l_A CHIP, carboxy terminus 98.9 4.6E-09 1.6E-13 83.4 8.0 71 1-82 19-103 (281)
70 1na0_A Designed protein CTPR3; 98.9 1.3E-08 4.5E-13 66.5 8.8 62 1-73 58-119 (125)
71 2kat_A Uncharacterized protein 98.9 2.2E-09 7.5E-14 72.8 5.1 53 1-64 34-86 (115)
72 3uq3_A Heat shock protein STI1 98.9 9.6E-09 3.3E-13 75.4 8.9 71 2-83 155-239 (258)
73 4eqf_A PEX5-related protein; a 98.9 6.3E-09 2.2E-13 81.9 8.4 75 1-86 80-168 (365)
74 1xnf_A Lipoprotein NLPI; TPR, 98.9 4E-09 1.4E-13 78.6 6.9 53 2-65 59-111 (275)
75 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 5.1E-09 1.7E-13 89.2 7.8 62 1-73 332-393 (457)
76 2pzi_A Probable serine/threoni 98.8 5.1E-09 1.7E-13 93.6 7.7 81 1-92 448-548 (681)
77 2r5s_A Uncharacterized protein 98.8 1.6E-09 5.4E-14 79.1 3.3 54 1-66 21-74 (176)
78 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 6E-09 2.1E-13 88.8 7.3 71 1-82 283-382 (457)
79 1elr_A TPR2A-domain of HOP; HO 98.8 6E-09 2E-13 68.9 5.7 53 1-64 19-71 (131)
80 3ieg_A DNAJ homolog subfamily 98.8 1.5E-08 5.3E-13 77.3 8.8 61 2-73 288-348 (359)
81 3qou_A Protein YBBN; thioredox 98.8 5.2E-09 1.8E-13 83.1 6.3 80 2-92 133-233 (287)
82 2if4_A ATFKBP42; FKBP-like, al 98.8 2.9E-09 1E-13 87.2 4.9 63 1-74 245-307 (338)
83 1wao_1 Serine/threonine protei 98.8 1.5E-08 5.2E-13 87.2 9.3 54 1-65 21-74 (477)
84 4eqf_A PEX5-related protein; a 98.8 1.1E-08 3.6E-13 80.6 7.6 52 2-64 193-246 (365)
85 2e2e_A Formate-dependent nitri 98.8 9.4E-09 3.2E-13 73.9 5.7 53 2-65 26-78 (177)
86 2vsy_A XCC0866; transferase, g 98.8 2.6E-08 9E-13 85.1 9.4 53 2-65 39-91 (568)
87 1fch_A Peroxisomal targeting s 98.8 4.8E-08 1.6E-12 76.0 9.8 53 2-65 233-285 (368)
88 1elr_A TPR2A-domain of HOP; HO 98.7 2.1E-08 7.1E-13 66.3 6.5 59 1-71 53-118 (131)
89 1w3b_A UDP-N-acetylglucosamine 98.7 4.6E-08 1.6E-12 77.8 9.6 53 2-65 49-101 (388)
90 1fch_A Peroxisomal targeting s 98.7 2.5E-08 8.6E-13 77.6 7.6 55 1-66 79-133 (368)
91 3u4t_A TPR repeat-containing p 98.7 9.8E-09 3.3E-13 76.9 5.0 54 1-65 89-142 (272)
92 2yhc_A BAMD, UPF0169 lipoprote 98.7 2E-08 6.8E-13 76.1 6.7 54 1-65 19-75 (225)
93 1w3b_A UDP-N-acetylglucosamine 98.7 5E-08 1.7E-12 77.6 9.2 52 2-64 151-202 (388)
94 2kck_A TPR repeat; tetratricop 98.7 2.3E-08 8E-13 64.5 6.0 53 1-64 55-110 (112)
95 1xnf_A Lipoprotein NLPI; TPR, 98.7 5.4E-08 1.8E-12 72.5 8.7 55 1-66 92-146 (275)
96 4g1t_A Interferon-induced prot 98.7 1.1E-08 3.8E-13 83.0 5.3 55 2-64 154-208 (472)
97 3as5_A MAMA; tetratricopeptide 98.7 6.4E-08 2.2E-12 67.1 8.4 53 2-65 58-110 (186)
98 3as5_A MAMA; tetratricopeptide 98.7 9.4E-08 3.2E-12 66.2 9.1 52 2-64 24-75 (186)
99 4abn_A Tetratricopeptide repea 98.7 2.8E-08 9.6E-13 84.7 7.8 61 2-65 195-258 (474)
100 1hh8_A P67PHOX, NCF-2, neutrop 98.7 5.7E-08 2E-12 70.8 8.4 66 1-77 86-169 (213)
101 3qky_A Outer membrane assembly 98.7 3.4E-08 1.2E-12 75.3 7.3 54 1-65 30-86 (261)
102 2fo7_A Synthetic consensus TPR 98.7 1.4E-07 4.7E-12 61.7 9.3 54 1-65 16-69 (136)
103 2c2l_A CHIP, carboxy terminus 98.7 8.1E-09 2.8E-13 81.9 4.0 53 1-64 53-105 (281)
104 2if4_A ATFKBP42; FKBP-like, al 98.7 2E-08 6.8E-13 82.2 6.3 72 1-83 194-296 (338)
105 3ieg_A DNAJ homolog subfamily 98.7 3.9E-08 1.3E-12 75.0 7.4 54 1-65 18-71 (359)
106 3uq3_A Heat shock protein STI1 98.7 4.8E-08 1.6E-12 71.6 7.5 62 1-73 188-255 (258)
107 2q7f_A YRRB protein; TPR, prot 98.7 1.1E-07 3.6E-12 69.6 9.1 53 2-65 73-125 (243)
108 3hym_B Cell division cycle pro 98.7 6.6E-08 2.3E-12 73.4 8.1 52 2-64 107-158 (330)
109 3hym_B Cell division cycle pro 98.7 4.1E-08 1.4E-12 74.6 6.8 61 1-72 251-311 (330)
110 2vsy_A XCC0866; transferase, g 98.7 2.9E-08 1E-12 84.8 6.7 80 2-92 5-105 (568)
111 2v5f_A Prolyl 4-hydroxylase su 98.7 9.4E-08 3.2E-12 66.2 8.0 65 1-76 20-91 (104)
112 2fo7_A Synthetic consensus TPR 98.7 8.1E-08 2.8E-12 62.8 7.3 55 1-66 50-104 (136)
113 2r5s_A Uncharacterized protein 98.7 5.9E-08 2E-12 70.6 7.3 50 4-64 92-141 (176)
114 2q7f_A YRRB protein; TPR, prot 98.7 3.6E-08 1.2E-12 72.1 5.9 54 1-65 140-193 (243)
115 3mkr_A Coatomer subunit epsilo 98.7 8.6E-08 2.9E-12 76.7 8.7 56 2-68 182-237 (291)
116 3qky_A Outer membrane assembly 98.6 6.3E-08 2.2E-12 73.8 7.4 74 1-75 163-239 (261)
117 1ihg_A Cyclophilin 40; ppiase 98.6 3.2E-08 1.1E-12 82.8 6.1 54 1-65 238-307 (370)
118 3mkr_A Coatomer subunit epsilo 98.6 9.3E-08 3.2E-12 76.5 8.5 59 1-70 215-274 (291)
119 1wao_1 Serine/threonine protei 98.6 5.9E-08 2E-12 83.6 7.8 59 1-70 55-113 (477)
120 3u4t_A TPR repeat-containing p 98.6 1.3E-07 4.5E-12 70.7 8.7 48 1-59 18-65 (272)
121 2y4t_A DNAJ homolog subfamily 98.6 1.1E-07 3.7E-12 76.2 8.7 59 2-71 311-369 (450)
122 4abn_A Tetratricopeptide repea 98.6 8.2E-08 2.8E-12 81.8 8.0 56 2-68 237-295 (474)
123 3ma5_A Tetratricopeptide repea 98.6 5.8E-08 2E-12 65.6 5.7 40 15-65 2-41 (100)
124 3cv0_A Peroxisome targeting si 98.6 1.9E-07 6.6E-12 70.7 9.1 53 2-65 188-240 (327)
125 2ond_A Cleavage stimulation fa 98.6 2.1E-07 7.3E-12 73.5 9.6 80 2-92 115-217 (308)
126 2y4t_A DNAJ homolog subfamily 98.6 1.7E-07 5.9E-12 75.1 9.1 53 2-65 76-128 (450)
127 2vq2_A PILW, putative fimbrial 98.6 1.9E-07 6.5E-12 67.0 8.3 55 1-66 23-77 (225)
128 1qqe_A Vesicular transport pro 98.6 6.4E-08 2.2E-12 76.4 5.8 74 1-85 133-233 (292)
129 3qou_A Protein YBBN; thioredox 98.6 1.2E-07 4E-12 75.3 7.1 58 3-71 202-261 (287)
130 1qqe_A Vesicular transport pro 98.6 1.2E-07 4.1E-12 74.8 7.1 54 1-65 173-233 (292)
131 3cv0_A Peroxisome targeting si 98.6 3.2E-07 1.1E-11 69.5 9.1 53 2-65 154-206 (327)
132 3fp2_A TPR repeat-containing p 98.6 9.1E-08 3.1E-12 78.2 6.3 54 2-66 41-94 (537)
133 2xpi_A Anaphase-promoting comp 98.5 2E-07 7E-12 77.6 8.3 61 1-72 531-591 (597)
134 2ho1_A Type 4 fimbrial biogene 98.5 4.5E-07 1.5E-11 67.2 8.8 53 2-65 157-209 (252)
135 2ho1_A Type 4 fimbrial biogene 98.5 3.8E-07 1.3E-11 67.7 8.4 52 2-64 87-140 (252)
136 2pzi_A Probable serine/threoni 98.5 2.4E-07 8.2E-12 82.8 8.5 80 2-92 407-515 (681)
137 3fp2_A TPR repeat-containing p 98.5 4.5E-07 1.5E-11 74.1 9.1 52 2-64 292-343 (537)
138 4g1t_A Interferon-induced prot 98.5 1.9E-07 6.5E-12 75.7 6.8 53 2-65 229-281 (472)
139 2ond_A Cleavage stimulation fa 98.5 2.5E-07 8.5E-12 73.1 7.1 53 2-65 80-133 (308)
140 2gw1_A Mitochondrial precursor 98.5 3.1E-07 1.1E-11 74.1 7.7 53 1-65 21-73 (514)
141 2vq2_A PILW, putative fimbrial 98.5 6.5E-07 2.2E-11 64.2 8.4 52 2-64 93-146 (225)
142 2gw1_A Mitochondrial precursor 98.5 5.5E-07 1.9E-11 72.7 8.5 62 2-74 431-492 (514)
143 2yhc_A BAMD, UPF0169 lipoprote 98.4 6.8E-07 2.3E-11 67.5 7.3 68 1-68 56-133 (225)
144 2xpi_A Anaphase-promoting comp 98.4 1.4E-06 4.8E-11 72.6 9.1 52 2-64 389-440 (597)
145 2qfc_A PLCR protein; TPR, HTH, 98.3 1.8E-06 6.3E-11 67.4 8.7 70 1-81 130-226 (293)
146 3edt_B KLC 2, kinesin light ch 98.3 6.7E-07 2.3E-11 65.9 4.7 72 1-83 100-201 (283)
147 3u3w_A Transcriptional activat 98.2 3.7E-06 1.3E-10 65.7 8.1 72 1-83 130-228 (293)
148 3edt_B KLC 2, kinesin light ch 98.2 1.3E-06 4.5E-11 64.3 4.6 49 1-60 58-114 (283)
149 4a1s_A PINS, partner of inscut 98.2 2.6E-06 8.8E-11 67.6 6.2 49 1-60 63-115 (411)
150 3ro2_A PINS homolog, G-protein 98.2 3.1E-06 1.1E-10 63.3 6.2 49 1-60 20-72 (338)
151 1nzn_A CGI-135 protein, fissio 98.2 3.3E-06 1.1E-10 63.7 6.3 64 2-76 54-119 (126)
152 3ulq_A Response regulator aspa 98.1 2.6E-06 8.8E-11 68.3 5.7 72 1-83 199-296 (383)
153 3sf4_A G-protein-signaling mod 98.1 4.2E-06 1.4E-10 65.3 6.4 50 1-61 24-77 (406)
154 1na3_A Designed protein CTPR2; 98.1 4.8E-06 1.6E-10 52.6 5.4 39 16-65 4-43 (91)
155 2l6j_A TPR repeat-containing p 98.1 2.7E-06 9.2E-11 55.5 4.3 37 19-66 3-39 (111)
156 1dce_A Protein (RAB geranylger 98.1 8.3E-06 2.8E-10 72.5 8.7 73 2-83 89-176 (567)
157 3ro3_A PINS homolog, G-protein 98.1 6.7E-07 2.3E-11 60.2 1.2 52 1-63 24-81 (164)
158 1dce_A Protein (RAB geranylger 98.1 5.3E-06 1.8E-10 73.7 7.2 81 2-83 45-141 (567)
159 2qfc_A PLCR protein; TPR, HTH, 98.1 2.2E-06 7.5E-11 67.0 3.7 52 1-63 170-228 (293)
160 1ouv_A Conserved hypothetical 98.1 3.8E-06 1.3E-10 63.9 5.0 76 1-89 165-260 (273)
161 3u3w_A Transcriptional activat 98.1 1.1E-06 3.7E-11 68.8 1.9 77 1-88 170-274 (293)
162 3ulq_A Response regulator aspa 98.1 1.6E-06 5.6E-11 69.5 2.8 53 1-64 118-176 (383)
163 2ifu_A Gamma-SNAP; membrane fu 98.1 1.4E-06 4.6E-11 69.2 2.3 52 2-64 131-188 (307)
164 4f3v_A ESX-1 secretion system 98.0 1.2E-05 4E-10 67.2 7.6 58 2-71 187-247 (282)
165 2ooe_A Cleavage stimulation fa 98.0 3.6E-05 1.2E-09 65.0 9.9 80 2-92 337-439 (530)
166 3u64_A Protein TP_0956; tetrat 98.0 9.5E-06 3.2E-10 69.2 6.3 57 2-64 179-237 (301)
167 3gw4_A Uncharacterized protein 98.0 1.2E-05 4.2E-10 57.3 5.9 49 1-60 41-95 (203)
168 3nf1_A KLC 1, kinesin light ch 98.0 2.6E-06 9E-11 64.0 2.4 52 1-63 168-227 (311)
169 2ooe_A Cleavage stimulation fa 97.9 2E-05 6.7E-10 66.6 7.4 52 3-65 303-355 (530)
170 3ly7_A Transcriptional activat 97.9 1.8E-05 6.3E-10 68.8 7.4 58 1-70 292-349 (372)
171 3nf1_A KLC 1, kinesin light ch 97.9 1.6E-05 5.4E-10 59.7 5.8 50 1-61 42-99 (311)
172 3o48_A Mitochondria fission 1 97.9 2.8E-05 9.5E-10 59.5 7.2 66 2-78 59-125 (134)
173 3rjv_A Putative SEL1 repeat pr 97.9 2.4E-05 8.1E-10 59.1 6.6 52 2-60 105-158 (212)
174 1ouv_A Conserved hypothetical 97.9 3.8E-05 1.3E-09 58.3 7.6 51 2-61 22-72 (273)
175 1y8m_A FIS1; mitochondria, unk 97.9 5E-05 1.7E-09 58.8 8.1 65 2-77 58-123 (144)
176 3q15_A PSP28, response regulat 97.9 1.9E-05 6.4E-10 63.5 5.9 52 1-63 237-293 (378)
177 3sf4_A G-protein-signaling mod 97.9 1.2E-05 4.2E-10 62.6 4.5 52 2-64 203-260 (406)
178 3q15_A PSP28, response regulat 97.8 7.6E-06 2.6E-10 65.8 3.0 52 1-63 116-173 (378)
179 3ro2_A PINS homolog, G-protein 97.8 7E-06 2.4E-10 61.3 2.5 52 1-63 58-115 (338)
180 3dra_A Protein farnesyltransfe 97.8 2.4E-05 8.4E-10 65.0 5.9 74 1-82 84-177 (306)
181 2ifu_A Gamma-SNAP; membrane fu 97.8 1.3E-05 4.4E-10 63.5 3.9 53 1-65 170-228 (307)
182 3qww_A SET and MYND domain-con 97.8 2.7E-05 9.4E-10 67.6 6.4 53 2-65 314-379 (433)
183 3gw4_A Uncharacterized protein 97.8 9.1E-06 3.1E-10 58.0 2.4 51 1-62 81-138 (203)
184 3ro3_A PINS homolog, G-protein 97.8 2.6E-05 9E-10 52.2 4.5 51 1-62 64-120 (164)
185 4a1s_A PINS, partner of inscut 97.8 1.4E-05 4.8E-10 63.3 3.5 49 1-60 101-155 (411)
186 3dss_A Geranylgeranyl transfer 97.8 5.5E-05 1.9E-09 64.1 7.2 54 2-65 126-179 (331)
187 3dra_A Protein farnesyltransfe 97.8 5.1E-05 1.7E-09 63.1 6.8 55 2-65 49-103 (306)
188 3dss_A Geranylgeranyl transfer 97.7 5.1E-05 1.8E-09 64.3 6.7 73 2-83 90-177 (331)
189 3rjv_A Putative SEL1 repeat pr 97.7 0.00015 5.1E-09 54.6 8.6 62 2-73 145-208 (212)
190 2kc7_A BFR218_protein; tetratr 97.7 1.1E-05 3.7E-10 52.6 1.9 46 1-65 50-95 (99)
191 3q7a_A Farnesyltransferase alp 97.7 5.8E-05 2E-09 64.6 6.6 54 2-65 70-123 (349)
192 3qww_A SET and MYND domain-con 97.7 6.1E-05 2.1E-09 65.4 6.1 63 1-74 355-430 (433)
193 3n71_A Histone lysine methyltr 97.6 9E-05 3.1E-09 65.3 6.4 54 1-65 324-390 (490)
194 1klx_A Cysteine rich protein B 97.6 0.00021 7.1E-09 51.1 7.0 49 2-60 41-90 (138)
195 3qwp_A SET and MYND domain-con 97.6 8.2E-05 2.8E-09 64.2 5.6 54 1-65 302-368 (429)
196 3n71_A Histone lysine methyltr 97.5 0.00012 4.1E-09 64.5 6.3 66 1-77 366-444 (490)
197 3qwp_A SET and MYND domain-con 97.5 0.00012 4.3E-09 63.0 6.1 65 1-76 344-421 (429)
198 3ly7_A Transcriptional activat 97.5 0.00018 6.3E-09 62.5 7.2 85 2-86 215-345 (372)
199 3bee_A Putative YFRE protein; 97.5 0.0001 3.5E-09 50.9 4.3 43 16-66 2-44 (93)
200 3q7a_A Farnesyltransferase alp 97.5 0.0003 1E-08 60.2 7.9 66 2-71 183-251 (349)
201 1klx_A Cysteine rich protein B 97.5 0.00068 2.3E-08 48.4 8.5 45 2-61 11-55 (138)
202 2xm6_A Protein corresponding t 97.4 0.00022 7.4E-09 59.6 5.9 52 2-63 383-435 (490)
203 1hz4_A MALT regulatory protein 97.3 0.00022 7.4E-09 56.4 4.5 52 1-63 29-85 (373)
204 2xm6_A Protein corresponding t 97.2 0.00096 3.3E-08 55.7 7.4 49 2-60 312-360 (490)
205 4f3v_A ESX-1 secretion system 97.1 0.00086 2.9E-08 55.9 6.8 79 2-93 151-252 (282)
206 4b4t_Q 26S proteasome regulato 97.1 0.00063 2.1E-08 54.3 5.5 52 1-63 19-87 (434)
207 3u64_A Protein TP_0956; tetrat 97.1 0.00061 2.1E-08 58.1 5.2 52 2-63 220-272 (301)
208 1hz4_A MALT regulatory protein 97.0 0.00065 2.2E-08 53.6 4.9 52 1-63 108-167 (373)
209 1pc2_A Mitochondria fission pr 96.9 0.0014 4.7E-08 50.6 5.3 73 2-82 14-102 (152)
210 3e4b_A ALGK; tetratricopeptide 96.8 0.0023 7.8E-08 54.0 6.7 50 2-58 195-244 (452)
211 3e4b_A ALGK; tetratricopeptide 96.8 0.0041 1.4E-07 52.4 8.1 53 3-66 162-214 (452)
212 3mv2_B Coatomer subunit epsilo 96.3 0.0064 2.2E-07 51.3 6.0 58 1-71 226-293 (310)
213 4b4t_Q 26S proteasome regulato 96.0 0.0052 1.8E-07 49.0 4.0 51 1-62 150-206 (434)
214 2cpt_A SKD1 protein, vacuolar 95.6 0.049 1.7E-06 40.1 7.5 68 2-88 15-87 (117)
215 1ya0_A SMG-7 transcript varian 95.3 0.051 1.7E-06 48.4 7.9 61 2-73 168-228 (497)
216 1xi4_A Clathrin heavy chain; a 95.1 0.046 1.6E-06 55.4 7.7 19 46-64 1149-1167(1630)
217 3ffl_A Anaphase-promoting comp 95.0 0.02 7E-07 45.0 4.1 49 1-60 35-92 (167)
218 1xi4_A Clathrin heavy chain; a 94.9 0.041 1.4E-06 55.7 6.7 53 1-62 1295-1347(1630)
219 1b89_A Protein (clathrin heavy 94.2 0.17 5.7E-06 44.9 8.3 77 1-82 163-274 (449)
220 1wfd_A Hypothetical protein 15 94.1 0.12 4.2E-06 36.2 6.1 68 1-87 11-82 (93)
221 1b89_A Protein (clathrin heavy 93.9 0.029 1E-06 49.8 2.9 53 1-62 222-274 (449)
222 2v5f_A Prolyl 4-hydroxylase su 93.7 0.076 2.6E-06 36.0 4.1 27 1-27 61-87 (104)
223 1zbp_A Hypothetical protein VP 93.5 0.26 9E-06 41.3 7.9 59 2-71 13-75 (273)
224 2ff4_A Probable regulatory pro 93.4 0.46 1.6E-05 39.9 9.4 66 2-71 187-255 (388)
225 3mv2_B Coatomer subunit epsilo 93.1 0.23 7.7E-06 41.8 6.9 47 5-62 85-131 (310)
226 2uy1_A Cleavage stimulation fa 92.9 0.5 1.7E-05 40.8 9.1 52 4-67 197-248 (493)
227 2dl1_A Spartin; SPG20, MIT, st 90.8 0.35 1.2E-05 36.1 4.8 40 39-78 37-81 (116)
228 4e6h_A MRNA 3'-END-processing 90.2 0.52 1.8E-05 43.1 6.5 76 2-88 486-585 (679)
229 2v6y_A AAA family ATPase, P60 89.9 0.37 1.3E-05 33.1 4.1 61 2-81 8-72 (83)
230 2v6x_A Vacuolar protein sortin 89.8 0.87 3E-05 30.9 5.9 65 2-85 10-78 (85)
231 4e6h_A MRNA 3'-END-processing 89.1 0.62 2.1E-05 42.6 6.1 53 3-66 49-101 (679)
232 2w2u_A Hypothetical P60 katani 86.7 0.96 3.3E-05 31.2 4.5 45 2-65 16-60 (83)
233 1nzn_A CGI-135 protein, fissio 83.4 1.3 4.5E-05 32.9 4.2 55 2-64 17-72 (126)
234 2zan_A Vacuolar protein sortin 80.6 0.33 1.1E-05 41.6 0.0 67 1-86 7-78 (444)
235 4a5x_A MITD1, MIT domain-conta 76.2 6.4 0.00022 27.0 5.6 28 39-66 31-58 (86)
236 4gns_B Protein CSD3, chitin bi 76.0 3.3 0.00011 38.8 5.2 44 2-56 353-396 (754)
237 3kae_A CDC27, possible protein 74.6 9.5 0.00032 31.2 6.9 51 2-63 78-146 (242)
238 3eab_A Spastin; spastin, MIT, 74.2 5.7 0.00019 28.2 5.0 38 39-76 34-73 (89)
239 3mkq_B Coatomer subunit alpha; 73.3 6.5 0.00022 30.6 5.6 40 2-57 21-60 (177)
240 1ya0_A SMG-7 transcript varian 73.1 5.3 0.00018 35.4 5.6 34 21-65 153-186 (497)
241 4a5x_A MITD1, MIT domain-conta 72.7 2.8 9.5E-05 28.9 3.0 15 44-58 29-43 (86)
242 4g26_A Pentatricopeptide repea 65.0 37 0.0013 29.2 9.2 61 2-74 121-185 (501)
243 2crb_A Nuclear receptor bindin 63.6 21 0.00071 25.8 6.1 37 41-78 32-68 (97)
244 2dl1_A Spartin; SPG20, MIT, st 61.1 3.5 0.00012 30.6 1.7 39 43-81 15-59 (116)
245 2w2u_A Hypothetical P60 katani 60.5 5.1 0.00017 27.4 2.3 35 45-80 14-48 (83)
246 1wfd_A Hypothetical protein 15 60.2 3.9 0.00013 28.4 1.7 39 46-85 11-49 (93)
247 4h7y_A Dual specificity protei 60.2 33 0.0011 26.7 7.1 52 2-64 76-127 (161)
248 2cpt_A SKD1 protein, vacuolar 60.0 3.1 0.00011 30.3 1.2 15 45-59 32-46 (117)
249 3t5x_A PCI domain-containing p 59.6 9.3 0.00032 29.6 4.0 31 23-64 17-47 (203)
250 3mkq_A Coatomer beta'-subunit; 55.8 12 0.0004 32.2 4.3 30 17-57 678-707 (814)
251 4g26_A Pentatricopeptide repea 55.8 69 0.0024 27.5 9.2 64 2-77 86-153 (501)
252 4gof_A Small glutamine-rich te 54.9 13 0.00043 23.9 3.3 24 41-64 24-47 (52)
253 2jp3_A FXYD domain-containing 54.6 12 0.0004 25.4 3.2 12 111-122 3-14 (67)
254 2uy1_A Cleavage stimulation fa 52.8 26 0.0009 29.9 6.1 55 2-67 302-356 (493)
255 2v6x_A Vacuolar protein sortin 52.3 6.4 0.00022 26.4 1.7 38 46-84 9-46 (85)
256 4gns_B Protein CSD3, chitin bi 51.2 21 0.00072 33.4 5.5 43 23-76 616-658 (754)
257 4gq2_M Nucleoporin NUP120; bet 50.4 15 0.00052 34.5 4.5 38 10-58 830-867 (950)
258 4h7y_A Dual specificity protei 50.3 29 0.001 27.0 5.4 45 14-63 7-51 (161)
259 2v6y_A AAA family ATPase, P60 49.8 8.9 0.00031 26.0 2.1 33 46-79 7-39 (83)
260 3eab_A Spastin; spastin, MIT, 46.4 9.9 0.00034 26.9 2.0 37 43-79 9-54 (89)
261 4fhn_B Nucleoporin NUP120; pro 45.4 17 0.00059 34.6 4.0 35 12-57 834-868 (1139)
262 2crb_A Nuclear receptor bindin 45.3 18 0.00061 26.1 3.2 17 43-59 27-43 (97)
263 2lxb_A Small glutamine-rich te 45.2 22 0.00076 24.3 3.5 25 41-65 29-53 (74)
264 2zxe_G FXYD10, phospholemman-l 44.4 12 0.00043 25.7 2.2 11 112-122 6-16 (74)
265 4b4t_S RPN3, 26S proteasome re 44.4 16 0.00056 33.0 3.5 51 2-65 247-304 (523)
266 2ls4_A High affinity copper up 48.0 5.4 0.00018 22.3 0.0 15 123-137 2-16 (26)
267 2ff4_A Probable regulatory pro 41.4 59 0.002 27.0 6.3 23 43-65 183-205 (388)
268 3ax2_A Mitochondrial import re 40.1 33 0.0011 23.1 3.8 29 25-64 22-50 (73)
269 3mkq_A Coatomer beta'-subunit; 38.2 1.3E+02 0.0044 25.7 8.1 65 1-76 696-774 (814)
270 4asv_A Small glutamine-rich te 38.2 24 0.00082 25.1 2.9 26 41-66 41-66 (92)
271 3rau_A Tyrosine-protein phosph 38.2 20 0.00068 30.2 2.9 40 20-59 117-161 (363)
272 2ymb_A MITD1, MIT domain-conta 37.1 7.1 0.00024 32.3 0.0 47 41-87 40-90 (257)
273 3c3r_A Programmed cell death 6 37.0 27 0.00091 29.5 3.5 38 20-57 142-184 (380)
274 3umh_A Amyloid beta A4 protein 36.7 1.7E+02 0.0056 23.6 8.1 77 3-88 102-194 (211)
275 2zan_A Vacuolar protein sortin 36.5 7.4 0.00025 33.1 0.0 18 45-62 6-23 (444)
276 1zb1_A BRO1 protein; AIP1, BRO 36.3 17 0.00058 30.7 2.2 40 19-58 122-163 (392)
277 2rpa_A Katanin P60 ATPase-cont 35.5 22 0.00076 24.3 2.3 16 45-60 26-41 (78)
278 3myv_A SUSD superfamily protei 35.5 68 0.0023 27.1 5.9 48 2-60 164-219 (454)
279 1v54_D Cytochrome C oxidase su 35.0 27 0.00093 26.7 3.0 23 121-143 80-103 (147)
280 3t5v_B Nuclear mRNA export pro 34.4 40 0.0014 29.5 4.4 32 22-64 222-254 (455)
281 3r9m_A BRO1 domain-containing 33.2 40 0.0014 28.4 4.0 39 20-58 114-160 (376)
282 1wy6_A Hypothetical protein ST 33.0 1E+02 0.0036 24.1 6.0 36 14-60 119-154 (172)
283 3pmr_A Amyloid-like protein 1; 32.3 2E+02 0.0068 23.2 8.4 77 3-88 109-201 (219)
284 3qtm_A Uncharacterized protein 31.7 1.5E+02 0.0051 25.4 7.2 57 2-59 101-170 (346)
285 2y69_D Cytochrome C oxidase su 29.8 37 0.0013 26.5 3.0 23 121-143 102-125 (169)
286 2br9_A 14-3-3E, 14-3-3 protein 29.7 71 0.0024 25.7 4.8 65 2-73 146-221 (234)
287 2lxb_A Small glutamine-rich te 29.7 41 0.0014 22.9 2.8 20 2-21 35-54 (74)
288 2b8i_A PAS factor; four helix 29.0 44 0.0015 23.1 2.9 26 66-91 9-34 (77)
289 4b4t_R RPN7, 26S proteasome re 28.9 19 0.00064 30.4 1.3 36 17-63 128-163 (429)
290 2npm_A 14-3-3 domain containin 28.3 74 0.0025 26.2 4.7 65 2-73 172-246 (260)
291 2wb7_A PT26-6P; extra chromoso 27.9 36 0.0012 31.0 2.9 20 40-59 441-460 (526)
292 3mcx_A SUSD superfamily protei 27.7 1.2E+02 0.004 25.7 6.0 49 2-61 176-232 (477)
293 3kez_A Putative sugar binding 27.6 1.1E+02 0.0036 26.0 5.8 48 2-60 170-225 (461)
294 1wwp_A Hypothetical protein TT 26.6 79 0.0027 22.1 4.1 47 47-93 2-50 (119)
295 3s6n_M SurviVal motor neuron p 26.3 70 0.0024 19.2 3.1 16 46-61 17-32 (37)
296 4gq4_A Menin; tumor suppressor 26.2 2.2E+02 0.0075 25.7 7.6 71 5-89 283-365 (489)
297 1o9d_A 14-3-3-like protein C; 26.0 88 0.003 25.7 4.8 26 2-30 151-181 (260)
298 1sf8_A Chaperone protein HTPG; 25.6 25 0.00085 25.8 1.3 36 55-92 67-102 (126)
299 1om2_A Protein (mitochondrial 25.0 51 0.0017 23.3 2.8 36 25-71 25-64 (95)
300 3uzd_A 14-3-3 protein gamma; s 24.9 95 0.0033 25.3 4.8 65 2-73 147-222 (248)
301 3bu8_A Telomeric repeat-bindin 24.7 56 0.0019 26.8 3.3 44 44-87 127-171 (235)
302 3ffl_A Anaphase-promoting comp 24.5 1.6E+02 0.0056 22.6 5.8 13 2-14 79-91 (167)
303 3u84_A Menin; MLL, JUND, ledgf 24.4 2.1E+02 0.0072 26.0 7.2 70 5-88 298-379 (550)
304 2ymb_A MITD1, MIT domain-conta 23.9 16 0.00056 30.1 0.0 35 46-81 19-53 (257)
305 1s6c_B Potassium voltage-gated 23.8 14 0.00047 21.4 -0.4 23 122-144 5-28 (30)
306 1jog_A Hypothetical protein HI 23.6 50 0.0017 24.3 2.6 49 45-93 9-69 (146)
307 3lew_A SUSD-like carbohydrate 22.8 1.9E+02 0.0066 24.7 6.6 48 2-60 174-232 (495)
308 3snx_A SUSD homolog, putative 22.8 1.2E+02 0.004 25.9 5.2 48 2-60 160-220 (460)
309 3re2_A Predicted protein; meni 22.3 3E+02 0.01 24.6 7.6 71 5-89 276-358 (472)
310 1skh_A Major prion protein 2; 22.2 47 0.0016 19.2 1.7 20 121-141 5-26 (30)
311 3ubw_A 14-3-3E, 14-3-3 protein 21.3 1.2E+02 0.0042 25.0 4.8 65 2-73 172-247 (261)
312 1vp7_A Exodeoxyribonuclease VI 21.2 90 0.0031 22.3 3.5 12 2-13 32-43 (100)
313 3dfb_A Metal-binding protein S 21.1 1.1E+02 0.0039 21.6 3.9 37 2-57 52-88 (93)
314 2knc_A Integrin alpha-IIB; tra 20.6 1E+02 0.0035 19.7 3.3 24 123-146 21-46 (54)
315 1y8m_A FIS1; mitochondria, unk 20.5 2.8E+02 0.0094 20.8 9.7 80 6-94 26-130 (144)
316 2xs1_A Programmed cell death 6 20.5 73 0.0025 29.1 3.5 38 20-57 127-169 (704)
317 3esl_A Checkpoint serine/threo 20.1 2.6E+02 0.0088 22.1 6.3 52 2-62 95-146 (202)
No 1
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.94 E-value=4.6e-27 Score=183.49 Aligned_cols=89 Identities=60% Similarity=0.966 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCchh
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPEL 80 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kapel 80 (152)
|+++||+.|++||+|||++++||||||+||+++|+++|+..++.++|++|++||+|||++||+|+.|++++++++|+|||
T Consensus 61 ~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~el 140 (158)
T 1zu2_A 61 MIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQL 140 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHhc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhh
Q 031849 81 HMEIHKHGL 89 (152)
Q Consensus 81 h~e~~~~~~ 89 (152)
|.++|++++
T Consensus 141 ~~~~~~~~~ 149 (158)
T 1zu2_A 141 HAEAYKQGL 149 (158)
T ss_dssp HHHHHHSSS
T ss_pred cCccccccc
Confidence 999999966
No 2
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.41 E-value=1.1e-12 Score=93.45 Aligned_cols=54 Identities=13% Similarity=-0.001 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|+++++|+++|.+|..+| ++++|+++|++||+++|++.
T Consensus 28 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 28 DYPTAMRHYNEAVKRDPENAILYSNRAACLTKLM-----------EFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhc-----------cHHHHHHHHHHHHHhhhhhh
Confidence 3788999999999999999999999999998754 88899999999999999885
No 3
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.40 E-value=1.1e-12 Score=93.34 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~ 74 (152)
.+++|+..|++||++||++.++|++||.+|..+| ++++|+++|++||+++|+|...+..|..+
T Consensus 62 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~-----------~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 62 EFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMR-----------EWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 4789999999999999999999999999999764 99999999999999999999988887654
No 4
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.37 E-value=3.1e-12 Score=92.83 Aligned_cols=54 Identities=15% Similarity=0.078 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++|++.++|++||.+|...| ++++|+.+|++|++++|+|.
T Consensus 46 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 46 EYDLAKKYICTYINVQERDPKAHRFLGLLYELEE-----------NTDKAVECYRRSVELNPTQK 99 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------chHHHHHHHHHHHHhCCCCH
Confidence 4789999999999999999999999999999754 99999999999999999985
No 5
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.36 E-value=8.8e-13 Score=102.67 Aligned_cols=82 Identities=15% Similarity=0.189 Sum_probs=69.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
++++|+..|++|+++||+++++|+|+|+++..++.+. .-.+|++.+++|+.+|++||++||++.
T Consensus 17 ~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~-~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~ 95 (158)
T 1zu2_A 17 LFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFH-SISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAF 95 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccc-hhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcc
Confidence 3799999999999999999999999999999876321 234567789999999999999999996
Q ss_pred ----------HHHHHHHHHHcCchhhHH
Q 031849 66 ----------LYQKSLEVAAKAPELHME 83 (152)
Q Consensus 66 ----------~Y~ksLe~~~Kapelh~e 83 (152)
.|.++++++.||.++.++
T Consensus 96 l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 96 LTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 477888888888888754
No 6
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.32 E-value=1e-12 Score=93.23 Aligned_cols=53 Identities=11% Similarity=0.101 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|++||+++|++..+|+|||.+|..+| +|++|+++|++||+++|++
T Consensus 23 ~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~-----------~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 23 DFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEK-----------KFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhh-----------hHHHHHHHHHHHHHhCccc
Confidence 4799999999999999999999999999999864 9999999999999999976
No 7
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.31 E-value=3.7e-12 Score=95.09 Aligned_cols=54 Identities=13% Similarity=-0.002 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|+++++|++||.+|..+| +|++|+++|++|++++|+|.
T Consensus 51 ~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g-----------~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 51 RIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKE-----------QFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSSSCC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------cHHHHHHHHHHHHhhCCCCc
Confidence 3789999999999999999999999999998754 99999999999999999985
No 8
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.30 E-value=6.8e-12 Score=88.43 Aligned_cols=55 Identities=18% Similarity=0.207 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++|+++|++.++|++||.+|... +++++|+.+|++|++++|++..
T Consensus 32 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~-----------g~~~~A~~~~~~al~l~P~~~~ 86 (121)
T 1hxi_A 32 NLAEAALAFEAVCQKEPEREEAWRSLGLTQAEN-----------EKDGLAIIALNHARMLDPKDIA 86 (121)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHH
Confidence 378999999999999999999999999999975 4999999999999999999964
No 9
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.29 E-value=1.3e-12 Score=94.28 Aligned_cols=72 Identities=19% Similarity=0.177 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH--------------H
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL--------------Y 67 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~--------------Y 67 (152)
+++|+..++++++++|++.+++++||.+|..+| ++++|+++|+++++++|++.. |
T Consensus 89 ~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 89 KQAAIDALQRAIALNTVYADAYYKLGLVYDSMG-----------EHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHhC-----------CchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCH
Confidence 567777777777777777777777777777643 777777777777777777742 6
Q ss_pred HHHHHHHHcCchhhHHH
Q 031849 68 QKSLEVAAKAPELHMEI 84 (152)
Q Consensus 68 ~ksLe~~~Kapelh~e~ 84 (152)
.++++.+.++.+++++-
T Consensus 158 ~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 158 DEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHhCCccC
Confidence 66667777777766654
No 10
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.28 E-value=2e-11 Score=80.46 Aligned_cols=70 Identities=26% Similarity=0.283 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHHhcCCCChH-HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH------HHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHD-TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL------YQKSLEV 73 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~d-AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~------Y~ksLe~ 73 (152)
.+++|+..|+++++++|++.. ++++||.+|... +++++|+++|++|++++|++.. +.++++.
T Consensus 15 ~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~~ 83 (99)
T 2kc7_A 15 DIENALQALEEFLQTEPVGKDEAYYLMGNAYRKL-----------GDWQKALNNYQSAIELNPDSPALQARKMVMDILNF 83 (99)
T ss_dssp CHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 378999999999999999999 999999999875 5999999999999999999864 3455566
Q ss_pred HHcCchhh
Q 031849 74 AAKAPELH 81 (152)
Q Consensus 74 ~~Kapelh 81 (152)
+.+...+.
T Consensus 84 ~~~~~~~~ 91 (99)
T 2kc7_A 84 YNKDMYNQ 91 (99)
T ss_dssp HCCTTHHH
T ss_pred HHHHhccC
Confidence 66665544
No 11
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.28 E-value=2.1e-11 Score=83.66 Aligned_cols=70 Identities=17% Similarity=0.161 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH--------------
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------------- 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~-------------- 66 (152)
.+++|+..|+++|+++|++.++|+++|.+|..+| ++++|+.+|++|++++|++..
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~ 87 (126)
T 3upv_A 19 DWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLM-----------SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKE 87 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhC
Confidence 3789999999999999999999999999999754 999999999999999999863
Q ss_pred HHHHHHHHHcCchhh
Q 031849 67 YQKSLEVAAKAPELH 81 (152)
Q Consensus 67 Y~ksLe~~~Kapelh 81 (152)
|.++++.+.++.+++
T Consensus 88 ~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 88 YASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC
Confidence 556666666666665
No 12
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.27 E-value=1.4e-11 Score=91.94 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~ 74 (152)
.+++|+..|++|++++|+++++|++||++|..+| ++++|+.+|++|++++|+++.-+++-++.
T Consensus 85 ~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg-----------~~~eA~~~~~~al~l~~~~~~~~~A~~ll 147 (151)
T 3gyz_A 85 QFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLK-----------APLKAKECFELVIQHSNDEKLKIKAQSYL 147 (151)
T ss_dssp CHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4799999999999999999999999999999765 99999999999999999998766665543
No 13
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.22 E-value=7.3e-11 Score=85.77 Aligned_cols=54 Identities=9% Similarity=0.066 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|+++++|++||.+|...| ++++|+.+|++|++++|+|.
T Consensus 36 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~p~~~ 89 (148)
T 2vgx_A 36 XYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMG-----------QYDLAIHSYSYGAVMDIXEP 89 (148)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCT
T ss_pred ChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHhcCCCCc
Confidence 3789999999999999999999999999998754 99999999999999999984
No 14
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.22 E-value=9.3e-11 Score=83.11 Aligned_cols=54 Identities=13% Similarity=0.081 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++++.++|+++++|++||.+|... +++++|+.+|++|++++|+|.
T Consensus 33 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~ 86 (142)
T 2xcb_A 33 KWDDAQKIFQALCMLDHYDARYFLGLGACRQSL-----------GLYEQALQSYSYGALMDINEP 86 (142)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCT
T ss_pred cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHhcCCCCc
Confidence 378999999999999999999999999999875 499999999999999999985
No 15
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.21 E-value=3.3e-11 Score=86.61 Aligned_cols=54 Identities=20% Similarity=0.103 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++|++..+|++||.+|..+| +|++|+.+|++|++++|+|.
T Consensus 26 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 79 (164)
T 3sz7_A 26 EYSKAIDLYTQALSIAPANPIYLSNRAAAYSASG-----------QHEKAAEDAELATVVDPKYS 79 (164)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHhCCCCH
Confidence 3688999999999999999999999999988754 88999999999999999885
No 16
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.21 E-value=4.5e-11 Score=85.77 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=56.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH-HHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-LYQKSLEVAA 75 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne-~Y~ksLe~~~ 75 (152)
.+++|+..|++||+++|++..+|+++|.+|..+| +|++|+.+|++|++++|+|. ..+..|....
T Consensus 78 ~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g-----------~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 78 DLHEAEETSSEVLKREETNEKALFRRAKARIAAW-----------KLDEAEEDLKLLLRNHPAAASVVAREMKIVT 142 (162)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHh-----------cHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3789999999999999999999999999999764 99999999999999999998 6666665443
No 17
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.20 E-value=1.2e-11 Score=89.74 Aligned_cols=80 Identities=10% Similarity=0.155 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++||+.|++++..+|+++.++|+||++|... ++|++|+++|++||+++|+|.
T Consensus 13 ~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~-----------~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 13 VERYIASVQGSTPSPRQKSIKGFYFAKLYYEA-----------KEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp HHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcccCcccHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 68999999999999999999999999999975 499999999999999999995
Q ss_pred -----HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|++++++....++.|..+..-...++
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 113 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKND 113 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 377777777777778877777665444
No 18
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.19 E-value=6e-11 Score=81.54 Aligned_cols=53 Identities=17% Similarity=0.263 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhc---CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMV---SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~i---dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++|++ +|++..++++||.+|..+| +|++|+.+|++|++++|+|.
T Consensus 6 ~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 61 (117)
T 3k9i_A 6 EAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLG-----------EYRKAEAVLANGVKQFPNHQ 61 (117)
T ss_dssp -CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCch
Confidence 45666666666666 4666666666666666543 66666666666666666664
No 19
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.3e-10 Score=76.51 Aligned_cols=53 Identities=11% Similarity=0.089 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++..++++||.+|..+| ++++|+++|++|++++|+|
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 19 LYREAVHCYDQLITAQPQNPVGYSNKAMALIKLG-----------EYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTSCSST
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCc
Confidence 3789999999999999999999999999999764 9999999999999999998
No 20
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.17 E-value=5.2e-11 Score=92.63 Aligned_cols=72 Identities=17% Similarity=0.095 Sum_probs=58.6
Q ss_pred CHHHHHHHHHHHHhcCCC-------ChH-----HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc-------C
Q 031849 1 MILDAISKLEEALMVSPN-------RHD-----TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-------E 61 (152)
Q Consensus 1 mieeAIs~le~AL~idP~-------~~d-----AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel-------d 61 (152)
.|++|+.+|++||+++|+ ++. +|+|+|.++..+| +|++|+.||++||++ +
T Consensus 26 ~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lg-----------r~~eAl~~~~kAL~l~n~~~e~~ 94 (159)
T 2hr2_A 26 EYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLR-----------SFDEALHSADKALHYFNRRGELN 94 (159)
T ss_dssp CHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHhhhccccCC
Confidence 479999999999999999 665 9999999999875 777777777777777 9
Q ss_pred CCcH--H----------------HHHHHHHHHcCchhhHH
Q 031849 62 PSNE--L----------------YQKSLEVAAKAPELHME 83 (152)
Q Consensus 62 P~Ne--~----------------Y~ksLe~~~Kapelh~e 83 (152)
|++. . |..+++.+.++.++.++
T Consensus 95 pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 95 QDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp STHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 9884 2 45567788888877765
No 21
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.17 E-value=1.7e-10 Score=87.59 Aligned_cols=90 Identities=16% Similarity=0.207 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++|+++|++.+++++||.+|...+....+.....+++++|+.+|++|++++|++.
T Consensus 55 ~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~ 134 (217)
T 2pl2_A 55 VNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGER 134 (217)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCh
Confidence 5677777888888888887888888877775421122222223799999999999999999985
Q ss_pred -----HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|++++++. ..++.+..+......+|
T Consensus 135 ~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g 165 (217)
T 2pl2_A 135 DKAEASLKQALALE-DTPEIRSALAELYLSMG 165 (217)
T ss_dssp HHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc-cchHHHHHHHHHHHHcC
Confidence 355556665 66777777777665544
No 22
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.16 E-value=1.5e-10 Score=79.22 Aligned_cols=72 Identities=13% Similarity=0.012 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH--------------
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------------- 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~-------------- 66 (152)
.+++|+..|+++|+++|++.+++++||.+|..+ +++++|+.+|++|++++|++..
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 92 (137)
T 3q49_B 24 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKM-----------QQPEQALADCRRALELDGQSVKAHFFLGQCQLEMES 92 (137)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhh
Confidence 478999999999999999999999999999975 4999999999999999999863
Q ss_pred HHHHHHHHHcCchhhHH
Q 031849 67 YQKSLEVAAKAPELHME 83 (152)
Q Consensus 67 Y~ksLe~~~Kapelh~e 83 (152)
|.++++.+.++.++.++
T Consensus 93 ~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 93 YDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHChh
Confidence 44555555555555443
No 23
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.16 E-value=5.8e-11 Score=86.28 Aligned_cols=57 Identities=7% Similarity=-0.094 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQ 68 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ 68 (152)
.+++|+..|+++++++|++++++++||.+|...| ++++|+.+|++|++++|+|+.+.
T Consensus 70 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~ 126 (148)
T 2vgx_A 70 QYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXG-----------ELAEAESGLFLAQELIANXPEFX 126 (148)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHTTCGGGH
T ss_pred hHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHCcCCCcch
Confidence 4789999999999999999999999999999754 99999999999999999976553
No 24
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.15 E-value=2.5e-10 Score=72.94 Aligned_cols=61 Identities=28% Similarity=0.444 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe 72 (152)
.+++|+..|+++++++|++.+++++||.+|... +++++|+.+|++|++++|++......+-
T Consensus 24 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 84 (91)
T 1na3_A 24 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ-----------GDYDEAIEYYQKALELDPNNAEAKQNLG 84 (91)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 378999999999999999999999999999875 4999999999999999999976665543
No 25
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.3e-10 Score=79.71 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC------CCcHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE------PSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld------P~Ne~Y~ksLe~~ 74 (152)
.+++|+..|+++|+++|++..+|++||.+|..+| ++++|+.+|++|++++ |+|...+..+..+
T Consensus 53 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~ 121 (126)
T 3upv_A 53 SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK-----------EYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 121 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh-----------CHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHH
Confidence 4789999999999999999999999999999754 9999999999999999 9998877777655
Q ss_pred H
Q 031849 75 A 75 (152)
Q Consensus 75 ~ 75 (152)
.
T Consensus 122 ~ 122 (126)
T 3upv_A 122 S 122 (126)
T ss_dssp H
T ss_pred H
Confidence 4
No 26
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.15 E-value=6.3e-11 Score=85.16 Aligned_cols=64 Identities=20% Similarity=0.215 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH--HHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL--YQKSLEVAA 75 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~--Y~ksLe~~~ 75 (152)
.+++|+..|+++|+++|++..+|++||.+|..+| ++++|+.+|++|++++|+|.. ++..+..+.
T Consensus 60 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 60 QHEKAAEDAELATVVDPKYSKAWSRLGLARFDMA-----------DYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 4789999999999999999999999999999754 999999999999999999965 777766554
No 27
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.14 E-value=6.2e-11 Score=84.03 Aligned_cols=61 Identities=10% Similarity=0.030 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe 72 (152)
.+++|+..|+++++++|++++++++||.+|..+| ++++|+.+|++|++++|+|+.+....+
T Consensus 67 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~~~ 127 (142)
T 2xcb_A 67 LYEQALQSYSYGALMDINEPRFPFHAAECHLQLG-----------DLDGAESGFYSARALAAAQPAHEALAA 127 (142)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHTCGGGHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCcchHHHHH
Confidence 4789999999999999999999999999999764 999999999999999999876655443
No 28
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.14 E-value=1.1e-10 Score=107.18 Aligned_cols=80 Identities=18% Similarity=0.247 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|++||+++|++.++|+|||++|..+ +++++|+++|+|||+++|++.
T Consensus 59 ~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~-----------g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~ 127 (723)
T 4gyw_A 59 LQEALMHYKEAIRISPTFADAYSNMGNTLKEM-----------QDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNI 127 (723)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 34555555555555555555555555555443 377778888888888888774
Q ss_pred -----HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|++++++....++.+.++...+..++
T Consensus 128 ~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g 159 (723)
T 4gyw_A 128 PEAIASYRTALKLKPDFPDAYCNLAHCLQIVC 159 (723)
T ss_dssp HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCChHHHhhhhhHHHhcc
Confidence 255555555555555666665555444
No 29
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.13 E-value=1.4e-11 Score=84.73 Aligned_cols=67 Identities=12% Similarity=0.108 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH---HHHHHHHHHcC
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL---YQKSLEVAAKA 77 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~---Y~ksLe~~~Ka 77 (152)
.+++|+..|+++|+++|++.+++++||.+|... +++++|+.+|++|++++|+++. |.+++..+.+.
T Consensus 42 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-----------g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~~~~~~ 110 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQFPNHQALRVFYAMVLYNL-----------GRYEQGVELLLKIIAETSDDETIQSYKQAILFYADK 110 (117)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHCCCHHHHHTHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999975 4999999999999999999864 56666666554
Q ss_pred c
Q 031849 78 P 78 (152)
Q Consensus 78 p 78 (152)
.
T Consensus 111 l 111 (117)
T 3k9i_A 111 L 111 (117)
T ss_dssp T
T ss_pred H
Confidence 3
No 30
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.13 E-value=2.2e-10 Score=82.53 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQK 69 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~k 69 (152)
.+++|+..|+++|+++|++.++|++||.+|..+| ++++|+++|++||+++|+|..|+-
T Consensus 122 ~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~a~~~l 179 (184)
T 3vtx_A 122 EHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKG-----------LRDEAVKYFKKALEKEEKKAKYEL 179 (184)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTTHHHHHHCS
T ss_pred CchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCC-----------CHHHHHHHHHHHHhCCccCHHHHH
Confidence 3789999999999999999999999999999764 999999999999999999887753
No 31
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.11 E-value=1.5e-10 Score=87.88 Aligned_cols=54 Identities=20% Similarity=0.194 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++|++.+++++||.+|...| ++++|+.+|++|++++|++.
T Consensus 20 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~P~~~ 73 (217)
T 2pl2_A 20 RYDAALTLFERALKENPQDPEALYWLARTQLKLG-----------LVNPALENGKTLVARTPRYL 73 (217)
T ss_dssp CHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcH
Confidence 3789999999999999999999999999999764 99999999999999999984
No 32
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.10 E-value=2e-10 Score=105.41 Aligned_cols=54 Identities=17% Similarity=0.215 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+++|+..|++||+++|++.++|+|||++|..+| ++++|+++|++||+++|++..
T Consensus 93 ~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g-----------~~~eAi~~~~~Al~l~P~~~~ 146 (723)
T 4gyw_A 93 VQGALQCYTRAIQINPAFADAHSNLASIHKDSG-----------NIPEAIASYRTALKLKPDFPD 146 (723)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCSCCHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCChH
Confidence 566777777777777777777777777776543 677777777777777776653
No 33
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.09 E-value=2.1e-10 Score=77.91 Aligned_cols=52 Identities=23% Similarity=0.312 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 3 eeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
++|+..|+++++++|++..++++||.+|... +++++|+.+|++|++++|++.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~ 53 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEH-----------EQFDAALPHLRAALDFDPTYS 53 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHHCCCcH
Confidence 6799999999999999999999999999875 499999999999999999986
No 34
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.09 E-value=3.3e-10 Score=85.42 Aligned_cols=60 Identities=18% Similarity=0.079 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksL 71 (152)
.+++|+..|+++|+++|++.+++++||.+|... +++++|+.+|++|++++|+|......+
T Consensus 69 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~P~~~~a~~~l 128 (208)
T 3urz_A 69 NYDKAYLFYKELLQKAPNNVDCLEACAEMQVCR-----------GQEKDALRMYEKILQLEADNLAANIFL 128 (208)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 478999999999999999999999999999975 599999999999999999997644444
No 35
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.09 E-value=1.5e-10 Score=87.39 Aligned_cols=77 Identities=18% Similarity=0.329 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHH----------------hHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWC----------------LGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlyn----------------LGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|++.+++++ ||.+|...| ++++|+.+|++|++++|+|
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 19 QNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNR-----------NYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHCCCC
Confidence 4789999999999999999999999 999998754 9999999999999999999
Q ss_pred H---------------------HHHHHHHHHHcCchhhHHHHhhh
Q 031849 65 E---------------------LYQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 65 e---------------------~Y~ksLe~~~Kapelh~e~~~~~ 88 (152)
. .|++++++....++.+..+....
T Consensus 88 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 88 VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYY 132 (208)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 5 25555555555555565555543
No 36
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.09 E-value=9.5e-11 Score=79.58 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++.++|++||.+|...| ++++|+++|++|+++.|++
T Consensus 22 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 22 NASRALALFEELVETDPDYVGTYYHLGKLYERLD-----------RTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhhhcC
Confidence 4789999999999999999999999999998754 9999999999999998754
No 37
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.08 E-value=5.7e-10 Score=74.63 Aligned_cols=53 Identities=17% Similarity=0.100 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.++++++|.+|... +++++|+.+|++|++++|++.
T Consensus 32 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~ 84 (133)
T 2lni_A 32 YPQAMKHYTEAIKRNPKDAKLYSNRAACYTKL-----------LEFQLALKDCEECIQLEPTFI 84 (133)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCCch
Confidence 68999999999999999999999999999865 499999999999999999985
No 38
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=8.7e-10 Score=75.23 Aligned_cols=53 Identities=15% Similarity=0.121 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhcCCCC---hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~---~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++ ..+++++|.+|... +++++|+.+|+++++++|++.
T Consensus 44 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 44 YGGALAAYTQALGLDATPQDQAVLHRNRAACHLKL-----------EDYDKAETEASKAIEKDGGDV 99 (148)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHTSCCH
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHH-----------ccHHHHHHHHHHHHhhCccCH
Confidence 677788888888888876 77778888877764 377777777777777777774
No 39
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.04 E-value=1.9e-10 Score=82.46 Aligned_cols=54 Identities=15% Similarity=0.084 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHhc------------------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC
Q 031849 1 MILDAISKLEEALMV------------------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~le~AL~i------------------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP 62 (152)
.+++|+..|++||++ +|.+..+|+|||.+|..+ ++|++|+.+|++||+++|
T Consensus 26 ~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-----------~~~~~A~~~~~~al~~~p 94 (162)
T 3rkv_A 26 DYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI-----------GDLHEAEETSSEVLKREE 94 (162)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc-----------CcHHHHHHHHHHHHhcCC
Confidence 378999999999999 888889999999999975 499999999999999999
Q ss_pred CcH
Q 031849 63 SNE 65 (152)
Q Consensus 63 ~Ne 65 (152)
+|.
T Consensus 95 ~~~ 97 (162)
T 3rkv_A 95 TNE 97 (162)
T ss_dssp TCH
T ss_pred cch
Confidence 996
No 40
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.03 E-value=1.7e-09 Score=70.39 Aligned_cols=54 Identities=24% Similarity=0.158 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++++.++|++.++++++|.+|... +++++|+.+|+++++++|++.
T Consensus 19 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 72 (118)
T 1elw_A 19 NIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKK-----------GDYQKAYEDGCKTVDLKPDWG 72 (118)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhh-----------ccHHHHHHHHHHHHHhCcccH
Confidence 368899999999999999999999999998864 488999999999999999875
No 41
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.03 E-value=4e-10 Score=79.28 Aligned_cols=54 Identities=24% Similarity=0.150 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|++.+++++||.+|... +++++|+.+|+++++++|++.
T Consensus 66 ~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 66 KDGLAIIALNHARMLDPKDIAVHAALAVSHTNE-----------HNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCcCCC
Confidence 368999999999999999999999999999874 599999999999999999874
No 42
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.02 E-value=4.1e-10 Score=83.90 Aligned_cols=52 Identities=19% Similarity=0.201 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcCC-CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSP-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP-~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++|+++| .+..+++++|.+|...| ++++|+.+|++|++++|++
T Consensus 23 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~al~~~p~~ 75 (228)
T 4i17_A 23 YAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIK-----------KYKEAADYFDIAIKKNYNL 75 (228)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTTCSH
T ss_pred HHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhh-----------cHHHHHHHHHHHHHhCcch
Confidence 4556666666666665 55556666666655432 5555555555555555554
No 43
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.02 E-value=2.1e-09 Score=69.54 Aligned_cols=60 Identities=15% Similarity=0.173 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC--cHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS--NELYQKSL 71 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~--Ne~Y~ksL 71 (152)
.+++|+..|+++++++|++.++++++|.+|... +++++|+.+|+++++++|+ +......+
T Consensus 21 ~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~~~~~~~~l 82 (112)
T 2kck_A 21 NYTESIDLFEKAIQLDPEESKYWLMKGKALYNL-----------ERYEEAVDCYNYVINVIEDEYNKDVWAAK 82 (112)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHTSCCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 378999999999999999999999999999875 4999999999999999999 76554444
No 44
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.02 E-value=1.4e-09 Score=70.85 Aligned_cols=63 Identities=13% Similarity=0.091 Sum_probs=56.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~ 74 (152)
.+++|+..|+++++++|++..+++++|.+|...| ++++|..+|+++++++|++......+...
T Consensus 53 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 53 DYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN-----------RFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 3789999999999999999999999999998754 99999999999999999998777766544
No 45
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.01 E-value=1.8e-09 Score=73.00 Aligned_cols=53 Identities=25% Similarity=0.297 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHHhcCCCCh---HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~---dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|++. +++++||.+|...| ++++|+.+|+++++++|++
T Consensus 17 ~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~-----------~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 17 KYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATR-----------NFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp CHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTS
T ss_pred CHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHHCCCC
Confidence 36788888888888888888 78888888888654 8888888888888888887
No 46
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.00 E-value=2e-10 Score=89.33 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhc-------CCCChHHH----HHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMV-------SPNRHDTL----WCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~i-------dP~~~dAl----ynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.++||+..|++||++ +|++..+| ||+|++|..+| ++++|+.||++|++++|++.
T Consensus 72 r~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lg-----------r~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 72 SFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLG-----------RGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCcH
Confidence 378999999999999 99999999 99999999865 99999999999999999874
No 47
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.00 E-value=2.8e-09 Score=70.30 Aligned_cols=53 Identities=13% Similarity=0.109 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..+++++|.+|... +++++|+++|+++++++|++.
T Consensus 28 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 80 (131)
T 2vyi_A 28 FEAAVHFYGKAIELNPANAVYFCNRAAAYSKL-----------GNYAGAVQDCERAICIDPAYS 80 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-----------hchHHHHHHHHHHHhcCccCH
Confidence 68899999999999999999999999999865 489999999999999999875
No 48
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=2.1e-09 Score=73.31 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAA 75 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~ 75 (152)
.+++|+..|+++++++|++.++++++|.+|... +++++|+.+|+++++++|++..+...+....
T Consensus 80 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 80 DYDKAETEASKAIEKDGGDVKALYRRSQALEKL-----------GRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp CHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 378999999999999999999999999999875 5999999999999999999988887776553
No 49
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.00 E-value=6.3e-10 Score=78.68 Aligned_cols=61 Identities=21% Similarity=0.272 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCCCCh-------HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRH-------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~-------dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe 72 (152)
.+++|+..|++||+++|++. .+|++||++|..+ +++++|+++|++||+++|+.+..++.-+
T Consensus 57 ~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~-----------~~~~~A~~~~~kal~~~~~~~~~~~l~~ 124 (127)
T 4gcn_A 57 KFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQ-----------NDLSLAVQWFHRSLSEFRDPELVKKVKE 124 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhhCcCHHHHHHHHH
Confidence 47899999999999999885 4777788887754 5999999999999999998776655443
No 50
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=5.4e-10 Score=86.73 Aligned_cols=67 Identities=24% Similarity=0.252 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHHhcC-C-CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCc
Q 031849 1 MILDAISKLEEALMVS-P-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAP 78 (152)
Q Consensus 1 mieeAIs~le~AL~id-P-~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kap 78 (152)
+++++|..|++.++.+ | ++.|++|+||.+|++.+ +|++|..||+++|+++|+|.+.+..+++.++..
T Consensus 50 ~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~-----------~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 50 DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK-----------EYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTS-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 3679999999999999 8 78999999999999864 999999999999999999999999998887543
No 51
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.98 E-value=2.5e-09 Score=79.66 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.+++++||.+|..+| ++++|+++|++|++++|+|.
T Consensus 57 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 57 KYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMK-----------NNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp CHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCH
T ss_pred cHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHHCCCcH
Confidence 4789999999999999999999999999999754 99999999999999999987
No 52
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.98 E-value=1.3e-09 Score=73.63 Aligned_cols=63 Identities=16% Similarity=0.121 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHhcCCCC---hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~---~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~ 74 (152)
.+++|+..|+++++++|++ ++++++||.+|..+| ++++|+.+|+++++.+|+++....++...
T Consensus 54 ~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 54 NFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEG-----------KNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 3789999999999999999 999999999999754 99999999999999999999887776544
No 53
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.97 E-value=2.3e-09 Score=79.11 Aligned_cols=63 Identities=22% Similarity=0.269 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~ 74 (152)
.+++|+..|+++|+++|++..+++++|.+|..+ +++++|+++|++|++++|++...+..+..+
T Consensus 103 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 165 (198)
T 2fbn_A 103 DYPKAIDHASKVLKIDKNNVKALYKLGVANMYF-----------GFLEEAKENLYKAASLNPNNLDIRNSYELC 165 (198)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc-----------ccHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 378999999999999999999999999999875 599999999999999999998777666544
No 54
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.96 E-value=1.8e-09 Score=75.03 Aligned_cols=53 Identities=15% Similarity=0.021 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.++++++|.+|... +++++|+.+|++|++++|++.
T Consensus 29 ~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~ 81 (166)
T 1a17_A 29 YENAIKFYSQAIELNPSNAIYYGNRSLAYLRT-----------ECYGYALGDATRAIELDKKYI 81 (166)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCcccH
Confidence 45666666666666666666666666666543 256666666666666666553
No 55
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.96 E-value=1.7e-09 Score=91.57 Aligned_cols=53 Identities=4% Similarity=0.031 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|++||++||++.++|+++|.+|..+ +++++|+.+|++||++||+|.
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~-----------g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL-----------RDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCccCH
Confidence 44555555555555555555555555555432 255666666666666666663
No 56
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.95 E-value=2.7e-09 Score=71.30 Aligned_cols=60 Identities=18% Similarity=0.133 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksL 71 (152)
.+++|+..|+++++++|++..++++||.+|... +++++|+.+|+++++++|++......+
T Consensus 65 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~~~~~p~~~~~~~~l 124 (133)
T 2lni_A 65 EFQLALKDCEECIQLEPTFIKGYTRKAAALEAM-----------KDYTKAMDVYQKALDLDSSCKEAADGY 124 (133)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCGGGTHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 378999999999999999999999999999875 499999999999999999886544443
No 57
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.95 E-value=4.7e-09 Score=69.17 Aligned_cols=60 Identities=25% Similarity=0.399 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksL 71 (152)
.+++|+..|+++++++|++..+++++|.+|... +++++|+.+|+++++++|++..+...+
T Consensus 61 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~A~~~~~~~~~~~p~~~~~~~~l 120 (131)
T 2vyi_A 61 NYAGAVQDCERAICIDPAYSKAYGRMGLALSSL-----------NKHVEAVAYYKKALELDPDNETYKSNL 120 (131)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred chHHHHHHHHHHHhcCccCHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHhcCccchHHHHHH
Confidence 378999999999999999999999999999875 499999999999999999987665554
No 58
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.95 E-value=1.3e-09 Score=92.38 Aligned_cols=53 Identities=9% Similarity=0.084 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|++||++||++..+|++||.+|..+| ++++|+.+|++||+++|+|.
T Consensus 182 ~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g-----------~~~eAl~~~~~al~l~P~~~ 234 (382)
T 2h6f_A 182 PSQELEFIADILNQDAKNYHAWQHRQWVIQEFK-----------LWDNELQYVDQLLKEDVRNN 234 (382)
T ss_dssp CTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-----------CCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcC-----------ChHHHHHHHHHHHHhCCCCH
Confidence 456677777777777777777777777766543 66667777777777777664
No 59
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.94 E-value=1.2e-09 Score=79.85 Aligned_cols=54 Identities=11% Similarity=0.064 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++..++++||.+|... +++++|+++|++|++++|+|.
T Consensus 52 ~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~-----------~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 52 NMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQT-----------EKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHTTTTCS
T ss_pred CHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc-----------ccHHHHHHHHHHHHHhCCCcc
Confidence 378999999999999999999999999999975 499999999999999999865
No 60
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.92 E-value=3.4e-09 Score=86.49 Aligned_cols=60 Identities=27% Similarity=0.288 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksL 71 (152)
.+++|+..|++||+++|++..+|++||.+|..+| ++++|+.+|++|++++|+|......+
T Consensus 211 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~P~~~~a~~~l 270 (336)
T 1p5q_A 211 AFSAAIESCNKALELDSNNEKGLSRRGEAHLAVN-----------DFELARADFQKVLQLYPNNKAAKTQL 270 (336)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 4789999999999999999999999999999754 99999999999999999997654444
No 61
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.92 E-value=8.9e-09 Score=67.31 Aligned_cols=54 Identities=30% Similarity=0.489 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.++++++|.+|... +++++|+.+|+++++++|++.
T Consensus 24 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 77 (125)
T 1na0_A 24 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ-----------GDYDEAIEYYQKALELDPNNA 77 (125)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHhCCccH
Confidence 368899999999999999999999999998865 489999999999999999875
No 62
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.92 E-value=1.8e-09 Score=73.69 Aligned_cols=52 Identities=15% Similarity=0.178 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|+++++++|++..++++||.+|...| ++++|+.+|++|++++|+
T Consensus 58 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 58 QPEQALADCRRALELDGQSVKAHFFLGQCQLEME-----------SYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHChh
Confidence 3789999999999999999999999999999754 999999999999999998
No 63
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.91 E-value=2.2e-09 Score=74.88 Aligned_cols=55 Identities=24% Similarity=0.189 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+.++|+..|++||++||++..|++.||+++... ++|++|+.+|+++++.+|+++.
T Consensus 24 ~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~-----------g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 24 MTDEVSLLLEQALQLEPYNEAALSLIANDHFIS-----------FRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhhCCCCcc
Confidence 357999999999999999999999999999975 4999999999999999999543
No 64
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.90 E-value=4.4e-09 Score=85.88 Aligned_cols=54 Identities=15% Similarity=0.106 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCCCC---------------hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNR---------------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~---------------~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|++ ..+|+|||.+|..+| +|++|+.+|++||+++|+|.
T Consensus 162 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 230 (336)
T 1p5q_A 162 KYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQ-----------AFSAAIESCNKALELDSNNE 230 (336)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCcH
Confidence 4789999999999999999 699999999999764 99999999999999999985
No 65
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.89 E-value=8.3e-09 Score=71.58 Aligned_cols=55 Identities=11% Similarity=0.095 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++++++|++.++++++|.+|... +++++|+.+|+++++++|++..
T Consensus 62 ~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~a~~~~p~~~~ 116 (166)
T 1a17_A 62 CYGYALGDATRAIELDKKYIKGYYRRAASNMAL-----------GKFRAALRDYETVVKVKPHDKD 116 (166)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSTTCHH
T ss_pred CHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCCCHH
Confidence 378999999999999999999999999999875 4999999999999999999864
No 66
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.89 E-value=4.2e-09 Score=75.74 Aligned_cols=52 Identities=8% Similarity=0.101 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHH-HHhcccCCCchHHHHHhH--HHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNA-HTSHAFLTPDQDEAKEYF--NKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnA-y~~~g~l~~d~~~A~~~~--ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++.++++++|.+ |... +++ ++|+.+|+++++++|++
T Consensus 60 ~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~-----------~~~~~~~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 60 YSNSLLAYRQALQLRGENAELYAALATVLYYQA-----------SQHMTAQTRAMIDKALALDSNE 114 (177)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHT-----------TTCCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc-----------CCcchHHHHHHHHHHHHhCCCc
Confidence 4455555555555555555555555555 3332 243 55555555555555554
No 67
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.89 E-value=5.4e-09 Score=87.48 Aligned_cols=68 Identities=16% Similarity=0.202 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCch
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPE 79 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kape 79 (152)
.+++|+..|++||+++|++..+|++||.+|..+ +++++|+++|++|++++|+|...+..|....+.-+
T Consensus 288 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~-----------g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~ 355 (370)
T 1ihg_A 288 DWQGAVDSCLEALEIDPSNTKALYRRAQGWQGL-----------KEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIK 355 (370)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999975 49999999999999999999988777765544333
No 68
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.89 E-value=7.8e-09 Score=76.24 Aligned_cols=54 Identities=20% Similarity=0.123 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHhcCCCCh----------------HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRH----------------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~----------------dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++. .++++||.+|..+ +++++|+.+|++|++++|++
T Consensus 53 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~al~~~p~~ 121 (198)
T 2fbn_A 53 EINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKN-----------KDYPKAIDHASKVLKIDKNN 121 (198)
T ss_dssp CHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSTTC
T ss_pred CHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHHhCccc
Confidence 47899999999999999998 8999999999975 49999999999999999998
Q ss_pred H
Q 031849 65 E 65 (152)
Q Consensus 65 e 65 (152)
.
T Consensus 122 ~ 122 (198)
T 2fbn_A 122 V 122 (198)
T ss_dssp H
T ss_pred H
Confidence 5
No 69
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.88 E-value=4.6e-09 Score=83.36 Aligned_cols=71 Identities=11% Similarity=-0.013 Sum_probs=58.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH--------------
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------------- 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~-------------- 66 (152)
.+++|+..|++||+++|++..+++++|.+|..+| ++++|+.+|++|++++|+|..
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 87 (281)
T 2c2l_A 19 KYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ-----------QPEQALADCRRALELDGQSVKAHFFLGQCQLEMES 87 (281)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 3789999999999999999999999999998754 999999999999999999852
Q ss_pred HHHHHHHHHcCchhhH
Q 031849 67 YQKSLEVAAKAPELHM 82 (152)
Q Consensus 67 Y~ksLe~~~Kapelh~ 82 (152)
|.++++.+.++.++++
T Consensus 88 ~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 88 YDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCc
Confidence 5555566666655554
No 70
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.88 E-value=1.3e-08 Score=66.47 Aligned_cols=62 Identities=27% Similarity=0.425 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~ 73 (152)
.+++|+..|+++++++|++..++++||.+|... +++++|+.+|+++++++|++......+..
T Consensus 58 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 119 (125)
T 1na0_A 58 DYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ-----------GDYDEAIEYYQKALELDPNNAEAKQNLGN 119 (125)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 378999999999999999999999999999875 49999999999999999999877666543
No 71
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.88 E-value=2.2e-09 Score=72.80 Aligned_cols=53 Identities=17% Similarity=0.132 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++|+++|++.+++++||.+|... +++++|+.+|++|++++|++
T Consensus 34 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 34 QFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQ-----------GDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhcccc
Confidence 478999999999999999999999999999875 59999999999999999964
No 72
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.87 E-value=9.6e-09 Score=75.39 Aligned_cols=71 Identities=18% Similarity=0.180 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH--------------H
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL--------------Y 67 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~--------------Y 67 (152)
+++|+..|+++++++|++..++++||.+|... +++++|+.+|+++++++|++.. |
T Consensus 155 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~ 223 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRAPEDARGYSNRAAALAKL-----------MSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEY 223 (258)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhH
Confidence 68899999999999999999999999998865 4899999999999999998853 5
Q ss_pred HHHHHHHHcCchhhHH
Q 031849 68 QKSLEVAAKAPELHME 83 (152)
Q Consensus 68 ~ksLe~~~Kapelh~e 83 (152)
.++++.+.++.+++++
T Consensus 224 ~~A~~~~~~a~~~~~~ 239 (258)
T 3uq3_A 224 ASALETLDAARTKDAE 239 (258)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhChh
Confidence 5556666666666533
No 73
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.87 E-value=6.3e-09 Score=81.91 Aligned_cols=75 Identities=16% Similarity=0.153 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH--------------
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------------- 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~-------------- 66 (152)
.+++|+..|+++++++|++.+++++||.+|...| ++++|+.+|++|++++|++..
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 148 (365)
T 4eqf_A 80 DLPVTILFMEAAILQDPGDAEAWQFLGITQAENE-----------NEQAAIVALQRCLELQPNNLKALMALAVSYTNTSH 148 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHcccc
Confidence 4789999999999999999999999999999764 999999999999999999863
Q ss_pred HHHHHHHHHcCchhhHHHHh
Q 031849 67 YQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 67 Y~ksLe~~~Kapelh~e~~~ 86 (152)
|.++++.+.++.+++++...
T Consensus 149 ~~~A~~~~~~al~~~p~~~~ 168 (365)
T 4eqf_A 149 QQDACEALKNWIKQNPKYKY 168 (365)
T ss_dssp HHHHHHHHHHHHHHCHHHHC
T ss_pred HHHHHHHHHHHHHhCccchH
Confidence 66777777777777666544
No 74
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.87 E-value=4e-09 Score=78.63 Aligned_cols=53 Identities=21% Similarity=0.279 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.+++++||.+|...| ++++|+++|++|++++|++.
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~-----------~~~~A~~~~~~al~~~~~~~ 111 (275)
T 1xnf_A 59 RALARNDFSQALAIRPDMPEVFNYLGIYLTQAG-----------NFDAAYEAFDSVLELDPTYN 111 (275)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHhcCcccc
Confidence 567777777777777777777777777776543 66667777777777666653
No 75
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.85 E-value=5.1e-09 Score=89.23 Aligned_cols=62 Identities=18% Similarity=0.250 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~ 73 (152)
.+++|+..|++||+++|++..+||++|.+|..+ ++|++|+.+|++|++++|+|......+..
T Consensus 332 ~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~-----------g~~~~A~~~~~~al~l~P~~~~a~~~l~~ 393 (457)
T 1kt0_A 332 EYTKAVECCDKALGLDSANEKGLYRRGEAQLLM-----------NEFESAKGDFEKVLEVNPQNKAARLQISM 393 (457)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHTTC----CHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 478999999999999999999999999999975 49999999999999999999755544433
No 76
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.84 E-value=5.1e-09 Score=93.61 Aligned_cols=81 Identities=16% Similarity=0.182 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
.+++|+..|+++|+++|++.++|+++|++|..+ +++++|+++|++|++++|+|.
T Consensus 448 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~-----------g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~ 516 (681)
T 2pzi_A 448 DVAKATRKLDDLAERVGWRWRLVWYRAVAELLT-----------GDYDSATKHFTEVLDTFPGELAPKLALAATAELAGN 516 (681)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhccCcchHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCC
Confidence 367888889999988998888999999888864 488888888888888888773
Q ss_pred -----HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|++++++....++.|..+......+|
T Consensus 517 ~~~~~~~~~al~~~P~~~~a~~~lg~~~~~~g 548 (681)
T 2pzi_A 517 TDEHKFYQTVWSTNDGVISAAFGLARARSAEG 548 (681)
T ss_dssp CCTTCHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhCCchHHHHHHHHHHHHHcC
Confidence 255666666666666666666555444
No 77
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.83 E-value=1.6e-09 Score=79.05 Aligned_cols=54 Identities=11% Similarity=-0.007 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++|+++|++.+++++||.+|...| ++++|+.+|+++++++| ++.
T Consensus 21 ~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g-----------~~~~A~~~~~~a~~~~p-~~~ 74 (176)
T 2r5s_A 21 EHAQALNVIQTLSDELQSRGDVKLAKADCLLETK-----------QFELAQELLATIPLEYQ-DNS 74 (176)
T ss_dssp CHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTT-----------CHHHHHHHHTTCCGGGC-CHH
T ss_pred CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCC-----------CHHHHHHHHHHhhhccC-ChH
Confidence 3789999999999999999999999999999754 89999999999999999 653
No 78
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.82 E-value=6e-09 Score=88.76 Aligned_cols=71 Identities=13% Similarity=0.084 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHhcCCCC---------------hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNR---------------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~---------------~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|++ ..+|+|||.+|..+| +|++|+.+|++||+++|+|.
T Consensus 283 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 351 (457)
T 1kt0_A 283 KYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLR-----------EYTKAVECCDKALGLDSANE 351 (457)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSTTCH
T ss_pred CHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHhcCCccH
Confidence 4789999999999999999 699999999999864 99999999999999999996
Q ss_pred H--------------HHHHHHHHHcCchhhH
Q 031849 66 L--------------YQKSLEVAAKAPELHM 82 (152)
Q Consensus 66 ~--------------Y~ksLe~~~Kapelh~ 82 (152)
. |.++++.+.++.++++
T Consensus 352 ~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P 382 (457)
T 1kt0_A 352 KGLYRRGEAQLLMNEFESAKGDFEKVLEVNP 382 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 2 5566666666655544
No 79
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.82 E-value=6e-09 Score=68.91 Aligned_cols=53 Identities=13% Similarity=0.123 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|++..+++++|.+|... +++++|+.+|+++++++|++
T Consensus 19 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 19 DFDTALKHYDKAKELDPTNMTYITNQAAVYFEK-----------GDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHhhcccc
Confidence 378999999999999999999999999999874 59999999999999999875
No 80
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.82 E-value=1.5e-08 Score=77.29 Aligned_cols=61 Identities=18% Similarity=0.255 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~ 73 (152)
+++|+..|+++++++|++.++++++|.+|...| ++++|+++|++|++++|+|+..+..|..
T Consensus 288 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 348 (359)
T 3ieg_A 288 PVEAIRICSEVLQMEPDNVNALKDRAEAYLIEE-----------MYDEAIQDYEAAQEHNENDQQIREGLEK 348 (359)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 567777777777777777777777777776543 7777777777777777777665555543
No 81
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.82 E-value=5.2e-09 Score=83.09 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++|+++|++.+++++||.+|...| ++++|+.+|+++++++|++.
T Consensus 133 ~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g-----------~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~ 201 (287)
T 3qou_A 133 YTDALPLLXDAWQLSNQNGEIGLLLAETLIALN-----------RSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAAD 201 (287)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTT-----------CHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCC-----------CHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhccc
Confidence 689999999999999999999999999999764 88888888888888888653
Q ss_pred -----HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|+++++.....+++|..+...+..+|
T Consensus 202 ~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g 233 (287)
T 3qou_A 202 TPEIQQLQQQVAENPEDAALATQLALQLHQVG 233 (287)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHhcCCccHHHHHHHHHHHHHcc
Confidence 255556666666777777777665554
No 82
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.81 E-value=2.9e-09 Score=87.18 Aligned_cols=63 Identities=17% Similarity=0.210 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~ 74 (152)
.+++|+..|++||+++|++..+||+||.+|..+| +|++|+.+|++|++++|+|...+..|...
T Consensus 245 ~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g-----------~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 245 RYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELG-----------QMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT-----------CHHHHHHHHHHTTC---------------
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3689999999999999999999999999999754 99999999999999999998777766544
No 83
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.81 E-value=1.5e-08 Score=87.24 Aligned_cols=54 Identities=13% Similarity=-0.020 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|++||+++|++.++|++||.+|..+| ++++|+++|++|++++|++.
T Consensus 21 ~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~p~~~ 74 (477)
T 1wao_1 21 DYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE-----------CYGYALGDATRAIELDKKYI 74 (477)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHSCTTCH
T ss_pred CHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhCCCCH
Confidence 3688999999999999999999999999988754 88888888888888888874
No 84
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.81 E-value=1.1e-08 Score=80.62 Aligned_cols=52 Identities=21% Similarity=0.144 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhcCCC--ChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPN--RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~--~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|+ +.+++++||.+|... +++++|+++|++|++++|++
T Consensus 193 ~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~-----------g~~~~A~~~~~~al~~~p~~ 246 (365)
T 4eqf_A 193 LEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLS-----------GEFNRAIDAFNAALTVRPED 246 (365)
T ss_dssp HHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHhCCCC
Confidence 34555555555555555 555555555555543 25555555555555555554
No 85
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.77 E-value=9.4e-09 Score=73.87 Aligned_cols=53 Identities=15% Similarity=0.233 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.+++++||.+|... +++++|+.+|++|++++|+|.
T Consensus 26 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------~~~~~A~~~~~~al~~~p~~~ 78 (177)
T 2e2e_A 26 PEAQLQALQDKIRANPQNSEQWALLGEYYLWQ-----------NDYSNSLLAYRQALQLRGENA 78 (177)
T ss_dssp -CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHHCSCH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHcCCCCH
Confidence 45566666666666666666666666666653 366666666666666666663
No 86
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.76 E-value=2.6e-08 Score=85.12 Aligned_cols=53 Identities=19% Similarity=0.293 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.+++++||.+|..+| ++++|+++|++|++++|++.
T Consensus 39 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 91 (568)
T 2vsy_A 39 TTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQ-----------RHAEAAVLLQQASDAAPEHP 91 (568)
T ss_dssp HHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCCH
Confidence 677888888888888888888888888877643 77788888888888888774
No 87
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.76 E-value=4.8e-08 Score=76.02 Aligned_cols=53 Identities=21% Similarity=0.191 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..++++||.+|... +++++|+.+|++|++++|++.
T Consensus 233 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~-----------g~~~~A~~~~~~al~~~~~~~ 285 (368)
T 1fch_A 233 YDKAVDCFTAALSVRPNDYLLWNKLGATLANG-----------NQSEEAVAAYRRALELQPGYI 285 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCcH
Confidence 56777777777777777777777777777764 378888888888888888775
No 88
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.75 E-value=2.1e-08 Score=66.27 Aligned_cols=59 Identities=15% Similarity=0.157 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHhcCCCC-------hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNR-------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~-------~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksL 71 (152)
.+++|+..|+++++++|++ ..++++||.+|... +++++|+++|+++++++|+ +.....+
T Consensus 53 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~~~~~~~-~~~~~~l 118 (131)
T 1elr_A 53 DYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKE-----------EKYKDAIHFYNKSLAEHRT-PDVLKKC 118 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCCC-HHHHHHH
T ss_pred cHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCC-HHHHHHH
Confidence 4789999999999999988 99999999999875 4999999999999999994 5444444
No 89
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.74 E-value=4.6e-08 Score=77.82 Aligned_cols=53 Identities=15% Similarity=0.110 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..++++++++|.+.++|++||.+|... +++++|+++|++|++++|++.
T Consensus 49 ~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~ 101 (388)
T 1w3b_A 49 LDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER-----------GQLQEAIEHYRHALRLKPDFI 101 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHcCcchH
Confidence 45666666666666666666666666666653 377777777777777777764
No 90
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.73 E-value=2.5e-08 Score=77.62 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++++++|++.+++++||.+|...| ++++|+++|++|++++|++..
T Consensus 79 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~~~~~~ 133 (368)
T 1fch_A 79 DLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENE-----------QELLAISALRRCLELKPDNQT 133 (368)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCc-----------CHHHHHHHHHHHHhcCCCCHH
Confidence 3789999999999999999999999999999754 999999999999999999863
No 91
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.73 E-value=9.8e-09 Score=76.91 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.+++++||.+|...| ++++|+++|++|++++|++.
T Consensus 89 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~al~~~~~~~ 142 (272)
T 3u4t_A 89 QDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKG-----------NFPLAIQYMEKQIRPTTTDP 142 (272)
T ss_dssp CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT-----------CHHHHHHHHGGGCCSSCCCH
T ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHhhcCCCcH
Confidence 3688999999999999999999999999998754 88999999999999999885
No 92
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.73 E-value=2e-08 Score=76.05 Aligned_cols=54 Identities=19% Similarity=0.035 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhcCCCCh---HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~---dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++.+|++. +++++||.+|...| ++++|+.+|+++++++|+++
T Consensus 19 ~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~-----------~~~~A~~~~~~~l~~~P~~~ 75 (225)
T 2yhc_A 19 NWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNA-----------DLPLAQAAIDRFIRLNPTHP 75 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCT
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHHHCcCCC
Confidence 47899999999999999874 79999999999754 99999999999999999986
No 93
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.72 E-value=5e-08 Score=77.61 Aligned_cols=52 Identities=21% Similarity=0.169 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++..+|++||.+|...| ++++|+.+|++|++++|++
T Consensus 151 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~p~~ 202 (388)
T 1w3b_A 151 LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG-----------EIWLAIHHFEKAVTLDPNF 202 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCc
Confidence 456666666666666666666666666666543 6666666666666666665
No 94
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.72 E-value=2.3e-08 Score=64.55 Aligned_cols=53 Identities=13% Similarity=-0.023 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHhcCCC--ChHHHHHhHHHHHhc-ccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPN--RHDTLWCLGNAHTSH-AFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~--~~dAlynLGnAy~~~-g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|+ +.+++++||.+|..+ | ++++|+++|+++++.+|++
T Consensus 55 ~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 55 RYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEG-----------KEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSS-----------CSHHHHHHHHHHGGGCCCC
T ss_pred CHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhC-----------CHHHHHHHHHHHhhcccCC
Confidence 378999999999999999 999999999999976 5 9999999999999999976
No 95
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.72 E-value=5.4e-08 Score=72.49 Aligned_cols=55 Identities=13% Similarity=0.036 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++++++|++.+++++||.+|... +++++|+.+|+++++++|++..
T Consensus 92 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~a~~~~~~~~~ 146 (275)
T 1xnf_A 92 NFDAAYEAFDSVLELDPTYNYAHLNRGIALYYG-----------GRDKLAQDDLLAFYQDDPNDPF 146 (275)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHhcCccccHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCCChH
Confidence 478999999999999999999999999999975 4999999999999999999973
No 96
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.72 E-value=1.1e-08 Score=83.01 Aligned_cols=55 Identities=22% Similarity=0.055 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|++||+++|+++++++++|+++..++.+ +++++|+++|++|++++|++
T Consensus 154 y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~--------~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW--------PPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS--------CCCCCTHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc--------hHHHHHHHHHHHHhhcCCcc
Confidence 68999999999999999999999999998765422 24445555555555555554
No 97
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.71 E-value=6.4e-08 Score=67.09 Aligned_cols=53 Identities=17% Similarity=0.200 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..+++++|.+|... +++++|+++|+++++++|++.
T Consensus 58 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 110 (186)
T 3as5_A 58 VDRGTELLERSLADAPDNVKVATVLGLTYVQV-----------QKYDLAVPLLIKVAEANPINF 110 (186)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhcCcHhH
Confidence 56677777777777777777777777776653 366666666666666666653
No 98
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.71 E-value=9.4e-08 Score=66.23 Aligned_cols=52 Identities=19% Similarity=0.232 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++..+++++|.+|... +++++|+++|+++++++|++
T Consensus 24 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~A~~~~~~~~~~~~~~ 75 (186)
T 3as5_A 24 YSQAVMLLEQVYDADAFDVDVALHLGIAYVKT-----------GAVDRGTELLERSLADAPDN 75 (186)
T ss_dssp HHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhCccChHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhcCCCC
Confidence 34444455555544554444455555444432 24444555555555444443
No 99
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.71 E-value=2.8e-08 Score=84.65 Aligned_cols=61 Identities=23% Similarity=0.235 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC---CcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP---SNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP---~Ne 65 (152)
+++|+..|++||+++|++.++|++||++|..+.|...+ ..+++++|+++|++|++++| ++.
T Consensus 195 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~---~~g~~~~A~~~~~~al~~~p~~~~~~ 258 (474)
T 4abn_A 195 VMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQ---NPKISQQALSAYAQAEKVDRKASSNP 258 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTC---CHHHHHHHHHHHHHHHHHCGGGGGCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhcc---ccchHHHHHHHHHHHHHhCCCcccCH
Confidence 68999999999999999999999999999864110000 11588888888888888888 664
No 100
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.71 E-value=5.7e-08 Score=70.82 Aligned_cols=66 Identities=20% Similarity=0.168 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHhcCCCCh----------------HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRH----------------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~----------------dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|+++++++|++. +++++||.+|...| ++++|+++|++|++++|++
T Consensus 86 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 86 KYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKE-----------EWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCCSG
T ss_pred cHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHcCccc
Confidence 37899999999999999888 99999999999754 9999999999999999976
Q ss_pred --HHHHHHHHHHHcC
Q 031849 65 --ELYQKSLEVAAKA 77 (152)
Q Consensus 65 --e~Y~ksLe~~~Ka 77 (152)
..+.++++...++
T Consensus 155 ~~~~~~~a~~~~~~~ 169 (213)
T 1hh8_A 155 RHSKIDKAMECVWKQ 169 (213)
T ss_dssp GGGHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHhc
Confidence 4555566555443
No 101
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.70 E-value=3.4e-08 Score=75.31 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhcCCCC---hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~---~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++.+|++ .+++++||.+|... ++|++|+.+|+++++++|+++
T Consensus 30 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~-----------~~~~~A~~~~~~~l~~~p~~~ 86 (261)
T 3qky_A 30 KYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQN-----------KEYLLAASEYERFIQIYQIDP 86 (261)
T ss_dssp CHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCT
T ss_pred CHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHh-----------CcHHHHHHHHHHHHHHCCCCc
Confidence 4789999999999999999 99999999999975 499999999999999999763
No 102
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.70 E-value=1.4e-07 Score=61.74 Aligned_cols=54 Identities=26% Similarity=0.439 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++..+++++|.++... +++++|+.+|+++++++|++.
T Consensus 16 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 69 (136)
T 2fo7_A 16 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ-----------GDYDEAIEYYQKALELDPRSA 69 (136)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHh-----------cCHHHHHHHHHHHHHHCCCch
Confidence 368999999999999999999999999998864 489999999999999999875
No 103
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.70 E-value=8.1e-09 Score=81.93 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|++||+++|++..++++||.+|..+| ++++|+.+|++|++++|++
T Consensus 53 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSVKAHFFLGQCQLEME-----------SYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCccc
Confidence 3789999999999999999999999999999754 9999999999999999987
No 104
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.70 E-value=2e-08 Score=82.23 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHhcCCCCh-----------------HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMVSPNRH-----------------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~-----------------dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++||.++|++. .+|+|||.+|..+| +|++|+.+|++||+++|+
T Consensus 194 ~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g-----------~~~~A~~~~~~al~~~p~ 262 (338)
T 2if4_A 194 KLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLK-----------RYDEAIGHCNIVLTEEEK 262 (338)
T ss_dssp CCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTT-----------CCHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCC
Confidence 36899999999999999987 49999999999764 999999999999999999
Q ss_pred cHH--------------HHHHHHHHHcCchhhHH
Q 031849 64 NEL--------------YQKSLEVAAKAPELHME 83 (152)
Q Consensus 64 Ne~--------------Y~ksLe~~~Kapelh~e 83 (152)
|.. |.++++.+.++.++.+.
T Consensus 263 ~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~ 296 (338)
T 2if4_A 263 NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPD 296 (338)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 962 66777777777777654
No 105
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.69 E-value=3.9e-08 Score=75.03 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.++++++|.+|... +++++|+.+|+++++++|++.
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 71 (359)
T 3ieg_A 18 QLADALSQFHAAVDGDPDNYIAYYRRATVFLAM-----------GKSKAALPDLTKVIALKMDFT 71 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCCCcc
Confidence 378999999999999999999999999999875 489999999999999999885
No 106
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.69 E-value=4.8e-08 Score=71.63 Aligned_cols=62 Identities=15% Similarity=0.080 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC------CCcHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE------PSNELYQKSLEV 73 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld------P~Ne~Y~ksLe~ 73 (152)
.+++|+..|+++++++|++.+++++||.+|..+| ++++|+++|++|++++ |+|...+..+..
T Consensus 188 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 188 SFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK-----------EYASALETLDAARTKDAEVNNGSSAREIDQLYYK 255 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHH
Confidence 3789999999999999999999999999999764 9999999999999999 888776666543
No 107
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.68 E-value=1.1e-07 Score=69.64 Aligned_cols=53 Identities=19% Similarity=0.288 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..+++++|.+|... +++++|+++|+++++++|++.
T Consensus 73 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 125 (243)
T 2q7f_A 73 LERALAFYDKALELDSSAATAYYGAGNVYVVK-----------EMYKEAKDMFEKALRAGMENG 125 (243)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHTCCSH
T ss_pred HHHHHHHHHHHHHcCCcchHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCCCH
Confidence 57788888888888888888888888887764 378888888888888888774
No 108
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.67 E-value=6.6e-08 Score=73.40 Aligned_cols=52 Identities=12% Similarity=0.018 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++.+++++||.+|... +++++|+.+|++|++++|++
T Consensus 107 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~a~~~~~~~ 158 (330)
T 3hym_B 107 NEHARRYLSKATTLEKTYGPAWIAYGHSFAVE-----------SEHDQAMAAYFTAAQLMKGC 158 (330)
T ss_dssp HHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhcccc
Confidence 46677777777777777777777777777653 37777777777777777765
No 109
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.67 E-value=4.1e-08 Score=74.57 Aligned_cols=61 Identities=21% Similarity=0.305 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe 72 (152)
.+++|+..|+++++++|++..++++||.+|... +++++|+++|++|++++|++......+.
T Consensus 251 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~p~~~~~~~~l~ 311 (330)
T 3hym_B 251 KYAEALDYHRQALVLIPQNASTYSAIGYIHSLM-----------GNFENAVDYFHTALGLRRDDTFSVTMLG 311 (330)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHH-----------TCHHHHHHHHHTTTTTCSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCccchHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHccCCCchHHHHHHH
Confidence 478999999999999999999999999999875 4999999999999999999986665554
No 110
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.67 E-value=2.9e-08 Score=84.83 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
+++|+..|+++++++|++.+++++||.+|... +++++|+++|++|++++|++.
T Consensus 5 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~ 73 (568)
T 2vsy_A 5 GPRELLQLRAAVRHRPQDFVAWLMLADAELGM-----------GDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRH 73 (568)
T ss_dssp ----------------CCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCH
Confidence 68999999999999999999999999999875 599999999999999999985
Q ss_pred -----HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -----LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -----~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|++++++....++.+..+......+|
T Consensus 74 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 105 (568)
T 2vsy_A 74 AEAAVLLQQASDAAPEHPGIALWLGHALEDAG 105 (568)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Confidence 255555555555666666665444333
No 111
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.66 E-value=9.4e-08 Score=66.18 Aligned_cols=65 Identities=17% Similarity=0.109 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHhcC-------CCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVS-------PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 1 mieeAIs~le~AL~id-------P~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~ 73 (152)
.|+.|+.-|++||+.. +...+.+.+||.+|.++| ++++|+.+|++|++++|+|+....++..
T Consensus 20 ~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g-----------~~~~A~~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 20 DYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQG-----------DLDKALLLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHhcCCCCHHHHhhHHH
Confidence 4789999999999853 457899999999999865 9999999999999999999988888776
Q ss_pred HHc
Q 031849 74 AAK 76 (152)
Q Consensus 74 ~~K 76 (152)
+++
T Consensus 89 ~~~ 91 (104)
T 2v5f_A 89 FEY 91 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 112
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.66 E-value=8.1e-08 Score=62.84 Aligned_cols=55 Identities=25% Similarity=0.414 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|++++.++|++..+++++|.++... +++++|+.+|+++++++|++..
T Consensus 50 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~~ 104 (136)
T 2fo7_A 50 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ-----------GDYDEAIEYYQKALELDPRSAE 104 (136)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT-----------TCHHHHHHHHHHHHHHCTTCHH
T ss_pred CHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHHhCCCChH
Confidence 368999999999999999999999999999875 4999999999999999998754
No 113
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.66 E-value=5.9e-08 Score=70.62 Aligned_cols=50 Identities=12% Similarity=0.110 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 4 DAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 4 eAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+|+..|+++++++|++.+++++||.+|...| ++++|+.+|+++++++|++
T Consensus 92 ~a~~~~~~al~~~P~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 92 PELKRLEQELAANPDNFELACELAVQYNQVG-----------RDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTTCTTT
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHhCccc
Confidence 5799999999999999999999999999754 9999999999999999975
No 114
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.65 E-value=3.6e-08 Score=72.14 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.++++++|.+|... +++++|+.+|+++++++|++.
T Consensus 140 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 193 (243)
T 2q7f_A 140 QPKLALPYLQRAVELNENDTEARFQFGMCLANE-----------GMLDEALSQFAAVTEQDPGHA 193 (243)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCCHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCcccH
Confidence 367888888888888888888888888888764 488888888888888888875
No 115
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.65 E-value=8.6e-08 Score=76.71 Aligned_cols=56 Identities=16% Similarity=0.096 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQ 68 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ 68 (152)
+++|+..|+++++.+|++..++++||.+|..+| ++++|..+|++|++++|+|....
T Consensus 182 ~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g-----------~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 182 LQDAYYIFQEMADKCSPTLLLLNGQAACHMAQG-----------RWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCCCCHHHH
Confidence 689999999999999999999999999998754 99999999999999999997543
No 116
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.65 E-value=6.3e-08 Score=73.80 Aligned_cols=74 Identities=16% Similarity=0.151 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHHHhcCCC---ChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPN---RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAA 75 (152)
Q Consensus 1 mieeAIs~le~AL~idP~---~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~ 75 (152)
.+++|+..|+++|+.+|+ ..+++++||.+|..+|.. .......+++++|+.+|+++++.+|+++.+++++.+..
T Consensus 163 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~-~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~ 239 (261)
T 3qky_A 163 LYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQ-SVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYT 239 (261)
T ss_dssp CHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHT-SCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhccc-chhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHH
Confidence 378999999999999999 567999999999876521 00011347999999999999999999998888876655
No 117
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.64 E-value=3.2e-08 Score=82.79 Aligned_cols=54 Identities=20% Similarity=0.200 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHh----------------cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALM----------------VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~----------------idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|++||+ ++|.+..+|+|||.+|..+ +++++|+++|++||+++|+|
T Consensus 238 ~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-----------g~~~~A~~~~~~al~~~p~~ 306 (370)
T 1ihg_A 238 NWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKM-----------SDWQGAVDSCLEALEIDPSN 306 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHTTCTTC
T ss_pred CHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhc-----------cCHHHHHHHHHHHHHhCchh
Confidence 47899999999999 8999999999999999975 49999999999999999998
Q ss_pred H
Q 031849 65 E 65 (152)
Q Consensus 65 e 65 (152)
.
T Consensus 307 ~ 307 (370)
T 1ihg_A 307 T 307 (370)
T ss_dssp H
T ss_pred H
Confidence 5
No 118
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.64 E-value=9.3e-08 Score=76.52 Aligned_cols=59 Identities=20% Similarity=0.082 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHH-HHHHHHHHHHHcCCCcHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFN-KATLYFQQAVDEEPSNELYQKS 70 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~e-kA~~~FqkAleldP~Ne~Y~ks 70 (152)
.+++|+..|+++|+++|+++++++|||.++..+| +++ .|..+|+++++++|+|+.....
T Consensus 215 ~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g-----------~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 215 RWEAAEGVLQEALDKDSGHPETLINLVVLSQHLG-----------KPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 4789999999999999999999999999999765 554 5679999999999999865543
No 119
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.64 E-value=5.9e-08 Score=83.59 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKS 70 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ks 70 (152)
.+++|+..|++||+++|++..++++||.+|..+ +++++|+++|++|++++|++......
T Consensus 55 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~-----------g~~~eA~~~~~~al~~~p~~~~~~~~ 113 (477)
T 1wao_1 55 CYGYALGDATRAIELDKKYIKGYYRRAASNMAL-----------GKFRAALRDYETVVKVKPHDKDAKMK 113 (477)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHSTTCTTHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 478999999999999999999999999999975 59999999999999999998644333
No 120
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.63 E-value=1.3e-07 Score=70.72 Aligned_cols=48 Identities=10% Similarity=-0.092 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAle 59 (152)
.+++|+..|+++++++|++.+++++||.+|...| ++++|+++|+++++
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~ 65 (272)
T 3u4t_A 18 NYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELA-----------KYDLAQKDIETYFS 65 (272)
T ss_dssp CHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTT-----------CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHh
Confidence 3688999999999999999999999999988754 77788888888877
No 121
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.63 E-value=1.1e-07 Score=76.24 Aligned_cols=59 Identities=19% Similarity=0.276 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksL 71 (152)
+++|+..|+++++++|++.++|++||.+|..+ +++++|+.+|++|++++|+|......+
T Consensus 311 ~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~l 369 (450)
T 2y4t_A 311 PVEAIRVCSEVLQMEPDNVNALKDRAEAYLIE-----------EMYDEAIQDYETAQEHNENDQQIREGL 369 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHTTSSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHHhCcchHHHHHHH
Confidence 45566666666666666666666666666543 266666666666666666665544444
No 122
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.62 E-value=8.2e-08 Score=81.78 Aligned_cols=56 Identities=23% Similarity=0.150 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHhcCC---CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHH
Q 031849 2 ILDAISKLEEALMVSP---NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQ 68 (152)
Q Consensus 2 ieeAIs~le~AL~idP---~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ 68 (152)
+++|+..|++|++++| ++.++|++||.+|..+ +++++|+++|++|++++|++....
T Consensus 237 ~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~l~p~~~~a~ 295 (474)
T 4abn_A 237 SQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYE-----------ESYGEALEGFSQAAALDPAWPEPQ 295 (474)
T ss_dssp HHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHH
Confidence 7899999999999999 9999999999999975 499999999999999999997533
No 123
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.61 E-value=5.8e-08 Score=65.62 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=34.8
Q ss_pred cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 15 VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 15 idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.||++.+++++||.+|... +++++|+.+|++|++++|++.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~ 41 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKH-----------DNASRALALFEELVETDPDYV 41 (100)
T ss_dssp ---CCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSTTCT
T ss_pred CCccCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCcH
Confidence 5899999999999999975 499999999999999999985
No 124
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.61 E-value=1.9e-07 Score=70.72 Aligned_cols=53 Identities=19% Similarity=0.187 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++.++++++|.+|... +++++|+.+|+++++++|++.
T Consensus 188 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~ 240 (327)
T 3cv0_A 188 YDSAAANLRRAVELRPDDAQLWNKLGATLANG-----------NRPQEALDAYNRALDINPGYV 240 (327)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHcCCCCH
Confidence 45566666666666666666666666666543 366666666666666666654
No 125
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.61 E-value=2.1e-07 Score=73.52 Aligned_cols=80 Identities=10% Similarity=0.065 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhcCCCChH-HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031849 2 ILDAISKLEEALMVSPNRHD-TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~d-AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
+++|+..|+++|+++|++.+ +|.++|+++.. .+++++|..+|++|++++|.+.
T Consensus 115 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-----------~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~ 183 (308)
T 2ond_A 115 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-----------AEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK 183 (308)
T ss_dssp HHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-----------HHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhccccCccHHHHHHHHHHHH-----------hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 45666666666666666665 66666666654 3588899999999999888642
Q ss_pred -------HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -------LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -------~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|+++++.....++++..+......+|
T Consensus 184 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g 217 (308)
T 2ond_A 184 DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLN 217 (308)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC
Confidence 355566666666777777666665544
No 126
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.60 E-value=1.7e-07 Score=75.08 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..++++||.+|..+| ++++|+.+|+++++++|++.
T Consensus 76 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 76 SKAALPDLTKVIQLKMDFTAARLQRGHLLLKQG-----------KLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCCh
Confidence 566777777777777777777777777776543 77888888888888888765
No 127
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.60 E-value=1.9e-07 Score=67.03 Aligned_cols=55 Identities=20% Similarity=0.178 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+++|+..|+++++++|++.++++++|.+|... +++++|+++|+++++++|++..
T Consensus 23 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~~ 77 (225)
T 2vq2_A 23 DYRQATASIEDALKSDPKNELAWLVRAEIYQYL-----------KVNDKAQESFRQALSIKPDSAE 77 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc-----------CChHHHHHHHHHHHHhCCCChH
Confidence 478999999999999999999999999999875 4999999999999999998854
No 128
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.57 E-value=6.4e-08 Score=76.38 Aligned_cols=74 Identities=9% Similarity=0.007 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH--------
Q 031849 1 MILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-------- 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~------~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~-------- 66 (152)
.+++|+..|++||+++|+. .+++.+||.+|..+| ++++|+++|++|++++|++..
T Consensus 133 ~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 201 (292)
T 1qqe_A 133 DYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDG-----------QYIEASDIYSKLIKSSMGNRLSQWSLKDY 201 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTTSSCTTTGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence 3789999999999999875 578999999999764 999999999999999998632
Q ss_pred -------------HHHHHHHHHcCchhhHHHH
Q 031849 67 -------------YQKSLEVAAKAPELHMEIH 85 (152)
Q Consensus 67 -------------Y~ksLe~~~Kapelh~e~~ 85 (152)
|..+++.+.++.++++.+.
T Consensus 202 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 202 FLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 4455667777777666543
No 129
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.57 E-value=1.2e-07 Score=75.25 Aligned_cols=58 Identities=9% Similarity=0.019 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc--HHHHHHH
Q 031849 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN--ELYQKSL 71 (152)
Q Consensus 3 eeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N--e~Y~ksL 71 (152)
++|+..|+++++++|++.+++++||.+|... +++++|+++|+++++++|++ ...+..|
T Consensus 202 ~~a~~~l~~al~~~P~~~~~~~~la~~l~~~-----------g~~~~A~~~l~~~l~~~p~~~~~~a~~~l 261 (287)
T 3qou_A 202 TPEIQQLQQQVAENPEDAALATQLALQLHQV-----------GRNEEALELLFGHLRXDLTAADGQTRXTF 261 (287)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTGGGGHHHHHH
T ss_pred CccHHHHHHHHhcCCccHHHHHHHHHHHHHc-----------ccHHHHHHHHHHHHhcccccccchHHHHH
Confidence 5689999999999999999999999999975 49999999999999999998 4444433
No 130
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.56 E-value=1.2e-07 Score=74.79 Aligned_cols=54 Identities=13% Similarity=0.052 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHhcCCCChH-------HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHD-------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~d-------AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++++++|++.. +++++|.+|..+ +++++|+.+|++|++++|++.
T Consensus 173 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 173 QYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAA-----------TDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp CHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHT-----------TCHHHHHHHHHGGGCC-----
T ss_pred CHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhhCCCCC
Confidence 478999999999999998765 689999999875 499999999999999999864
No 131
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.56 E-value=3.2e-07 Score=69.47 Aligned_cols=53 Identities=21% Similarity=0.285 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..++++||.+|... +++++|+.+|+++++++|++.
T Consensus 154 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~~~~~~~~~~ 206 (327)
T 3cv0_A 154 YRECRTLLHAALEMNPNDAQLHASLGVLYNLS-----------NNYDSAAANLRRAVELRPDDA 206 (327)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCCcH
Confidence 58999999999999999999999999999875 499999999999999999985
No 132
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.55 E-value=9.1e-08 Score=78.22 Aligned_cols=54 Identities=17% Similarity=0.181 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+++|+..|+++|+++|++.+++++||.+|..+ +++++|+++|++|++++|+|..
T Consensus 41 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~p~~~~ 94 (537)
T 3fp2_A 41 FNEAIKYYQYAIELDPNEPVFYSNISACYIST-----------GDLEKVIEFTTKALEIKPDHSK 94 (537)
T ss_dssp CC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhcCCchHH
Confidence 67999999999999999999999999999975 4999999999999999999864
No 133
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.54 E-value=2e-07 Score=77.60 Aligned_cols=61 Identities=16% Similarity=0.160 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLE 72 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe 72 (152)
.+++|+..|+++++++|++..+|+.||++|...| ++++|.++|+++++++|+|+.....|.
T Consensus 531 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~~l~~~p~~~~~~~~l~ 591 (597)
T 2xpi_A 531 MYDAAIDALNQGLLLSTNDANVHTAIALVYLHKK-----------IPGLAITHLHESLAISPNEIMASDLLK 591 (597)
T ss_dssp CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 4789999999999999999999999999999765 999999999999999999987766654
No 134
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.52 E-value=4.5e-07 Score=67.24 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|+++++++|++..++++||.+|... +++++|+.+|+++++++|++.
T Consensus 157 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~~~~~~~~~~ 209 (252)
T 2ho1_A 157 PAQAKEYFEKSLRLNRNQPSVALEMADLLYKE-----------REYVPARQYYDLFAQGGGQNA 209 (252)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHTTSCCCH
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCcCcH
Confidence 56666677777766776666666666666653 367777777777777777664
No 135
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.52 E-value=3.8e-07 Score=67.68 Aligned_cols=52 Identities=15% Similarity=0.064 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHH--cCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD--EEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAle--ldP~N 64 (152)
+++|+..|+++++++|++..++++||.+|... +++++|+++|+++++ .+|++
T Consensus 87 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~~~~~~~~~~~ 140 (252)
T 2ho1_A 87 PKLADEEYRKALASDSRNARVLNNYGGFLYEQ-----------KRYEEAYQRLLEASQDTLYPER 140 (252)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHTTCTTCTTH
T ss_pred HHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHH-----------hHHHHHHHHHHHHHhCccCccc
Confidence 45666666666666666666666666666543 366666666666666 55554
No 136
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.51 E-value=2.4e-07 Score=82.79 Aligned_cols=80 Identities=9% Similarity=-0.050 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHH--------hcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH--------
Q 031849 2 ILDAISKLEEAL--------MVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-------- 65 (152)
Q Consensus 2 ieeAIs~le~AL--------~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne-------- 65 (152)
+++|+..|++++ +++|++.++++++|.+|... +++++|+++|++|++++|+|.
T Consensus 407 ~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~-----------g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 475 (681)
T 2pzi_A 407 PVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDL-----------GDVAKATRKLDDLAERVGWRWRLVWYRAV 475 (681)
T ss_dssp HHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhc-----------CCHHHHHHHHHHHhccCcchHHHHHHHHH
Confidence 689999999999 99999999999999999975 499999999999999999994
Q ss_pred -------------HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -------------LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -------------~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|++++++....++.+..+..-...+|
T Consensus 476 ~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g 515 (681)
T 2pzi_A 476 AELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAG 515 (681)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC
Confidence 255556666666666777766655444
No 137
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.50 E-value=4.5e-07 Score=74.10 Aligned_cols=52 Identities=19% Similarity=0.225 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++.++++++|.+|... +++++|+++|+++++++|++
T Consensus 292 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~a~~~~~~~ 343 (537)
T 3fp2_A 292 SQEFFKFFQKAVDLNPEYPPTYYHRGQMYFIL-----------QDYKNAKEDFQKAQSLNPEN 343 (537)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHhCCCC
Confidence 56777788888888888888888888877764 37778888888888887776
No 138
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.50 E-value=1.9e-07 Score=75.75 Aligned_cols=53 Identities=23% Similarity=0.205 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|++++.++|++.+++++||.+|... +++++|+++|++|++++|++.
T Consensus 229 ~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~-----------~~~~~A~~~~~~al~~~p~~~ 281 (472)
T 4g1t_A 229 EGEGEKLVEEALEKAPGVTDVLRSAAKFYRRK-----------DEPDKAIELLKKALEYIPNNA 281 (472)
T ss_dssp -CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHc-----------CchHHHHHHHHHHHHhCCChH
Confidence 45777788888888888888888888887764 488899999999999999875
No 139
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.49 E-value=2.5e-07 Score=73.13 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHh-cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALM-VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~-idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++|+..|++||+ ++|++..+|.++|.++..+| ++++|..+|++|++++|++.
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~-----------~~~~A~~~~~~al~~~p~~~ 133 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRM-----------KYEKVHSIYNRLLAIEDIDP 133 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTSSSSCT
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHhccccCc
Confidence 4899999999999 79999999999999998754 99999999999999999874
No 140
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.49 E-value=3.1e-07 Score=74.15 Aligned_cols=53 Identities=19% Similarity=0.045 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++| +..++++||.+|... +++++|+.+|+++++++|++.
T Consensus 21 ~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~p~~~ 73 (514)
T 2gw1_A 21 KYDDAIKYYNWALELKE-DPVFYSNLSACYVSV-----------GDLKKVVEMSTKALELKPDYS 73 (514)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCSCCH
T ss_pred cHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHH-----------hhHHHHHHHHHHHhccChHHH
Confidence 37889999999999998 588999999999875 489999999999999999885
No 141
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.48 E-value=6.5e-07 Score=64.21 Aligned_cols=52 Identities=15% Similarity=0.240 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHh--cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALM--VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~--idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++ .+|.+..+++++|.+|... +++++|+.+|+++++++|++
T Consensus 93 ~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 93 PAESMAYFDKALADPTYPTPYIANLNKGICSAKQ-----------GQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCC
Confidence 4566666666666 4455556666666666543 25666666666666666655
No 142
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.46 E-value=5.5e-07 Score=72.73 Aligned_cols=62 Identities=18% Similarity=0.243 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVA 74 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~ 74 (152)
+++|+..|+++++++|++.+++++||.+|...| ++++|+++|++|++++|+++.....+...
T Consensus 431 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 492 (514)
T 2gw1_A 431 FIEATNLLEKASKLDPRSEQAKIGLAQMKLQQE-----------DIDEAITLFEESADLARTMEEKLQAITFA 492 (514)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 689999999999999999999999999999754 99999999999999999998776665433
No 143
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.40 E-value=6.8e-07 Score=67.55 Aligned_cols=68 Identities=12% Similarity=0.127 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHhcCCCChH---HHHHhHHHHHhcccC-------CCchHHHHHhHHHHHHHHHHHHHcCCCcHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHD---TLWCLGNAHTSHAFL-------TPDQDEAKEYFNKATLYFQQAVDEEPSNELYQ 68 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~d---AlynLGnAy~~~g~l-------~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ 68 (152)
.+++|+..|+++++++|++.. |+|++|.+|...+.- ..+.....+++++|+.+|+++++.+|++....
T Consensus 56 ~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 56 DLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred CHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 378999999999999999975 899999999753200 00000113699999999999999999986443
No 144
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.37 E-value=1.4e-06 Score=72.55 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|+++++++|++.++|++||.+|...| ++++|+++|+++++++|++
T Consensus 389 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~~~~~~~~~ 440 (597)
T 2xpi_A 389 ISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEG-----------EHDQAISAYTTAARLFQGT 440 (597)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhCccc
Confidence 566777777777777777777777777776543 6666666666666666655
No 145
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.34 E-value=1.8e-06 Score=67.45 Aligned_cols=70 Identities=23% Similarity=0.191 Sum_probs=56.0
Q ss_pred CHHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHH---HcCCCcH------
Q 031849 1 MILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAV---DEEPSNE------ 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~------~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAl---eldP~Ne------ 65 (152)
.+++|+..|++||++.++. ..++++||++|... ++|++|+.+|++|+ +..|++.
T Consensus 130 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~-----------~~~~~A~~~~~kal~~~~~~~~~~~~~~~~ 198 (293)
T 2qfc_A 130 DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAEN-----------GYLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp CHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHHHHhcCccccchHHH
Confidence 3689999999999887665 67999999999975 49999999999999 6677643
Q ss_pred ------------HHHHHHHHHHcCchhh
Q 031849 66 ------------LYQKSLEVAAKAPELH 81 (152)
Q Consensus 66 ------------~Y~ksLe~~~Kapelh 81 (152)
.|.++++.+.++.++.
T Consensus 199 ~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 199 RYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 2667777777776654
No 146
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.29 E-value=6.7e-07 Score=65.88 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHhc--------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc--------CCCc
Q 031849 1 MILDAISKLEEALMV--------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE--------EPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~i--------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel--------dP~N 64 (152)
.+++|+..|++++++ +|....++++||.+|..+| ++++|+++|++|+++ +|.+
T Consensus 100 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~~~~~~~~~~ 168 (283)
T 3edt_B 100 KYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQG-----------KAEEVEYYYRRALEIYATRLGPDDPNV 168 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 378999999999998 6888999999999999764 999999999999998 5544
Q ss_pred H--------------HHHHHHHHHHcCchhhHH
Q 031849 65 E--------------LYQKSLEVAAKAPELHME 83 (152)
Q Consensus 65 e--------------~Y~ksLe~~~Kapelh~e 83 (152)
. .|.++++.+.++.++..+
T Consensus 169 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 169 AKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3 156666677666665443
No 147
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.23 E-value=3.7e-06 Score=65.74 Aligned_cols=72 Identities=24% Similarity=0.220 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHhcCCCChH------HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc---CCCcH------
Q 031849 1 MILDAISKLEEALMVSPNRHD------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE---EPSNE------ 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~d------AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel---dP~Ne------ 65 (152)
.+++|+..|++||++.++..+ ++.+||++|..+| ++++|+.+|++|+++ .|.+.
T Consensus 130 ~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-----------~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 198 (293)
T 3u3w_A 130 DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENG-----------YLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp CHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 368999999999998776555 7999999999754 999999999999952 11221
Q ss_pred ------------HHHHHHHHHHcCchhhHH
Q 031849 66 ------------LYQKSLEVAAKAPELHME 83 (152)
Q Consensus 66 ------------~Y~ksLe~~~Kapelh~e 83 (152)
.|.++++.+.++.++..+
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 266777777777665533
No 148
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.20 E-value=1.3e-06 Score=64.33 Aligned_cols=49 Identities=20% Similarity=0.204 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHHhc--------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 1 MILDAISKLEEALMV--------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~le~AL~i--------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|++++++ +|....++++||.+|...| ++++|+++|++|+++
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 58 KYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG-----------KYKEAEPLCKRALEI 114 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhc-----------cHHHHHHHHHHHHHH
Confidence 378999999999988 5778889999999999764 899999999999988
No 149
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.18 E-value=2.6e-06 Score=67.60 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHhcCCCCh----HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 1 MILDAISKLEEALMVSPNRH----DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~----dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|+++|+++|++. .++++||.+|... +++++|+.+|++|+++
T Consensus 63 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~ 115 (411)
T 4a1s_A 63 DCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYL-----------GDYNKAMQYHKHDLTL 115 (411)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHH
Confidence 47899999999999999987 5899999999875 4999999999999988
No 150
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.17 E-value=3.1e-06 Score=63.27 Aligned_cols=49 Identities=22% Similarity=0.155 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHhcCCCC----hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 1 MILDAISKLEEALMVSPNR----HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~----~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|+++++++|++ ..++++||.+|...| ++++|+++|++|+++
T Consensus 20 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 20 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH-----------DYAKALEYHHHDLTL 72 (338)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHH
Confidence 4789999999999999999 478999999998754 899999999999887
No 151
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.17 E-value=3.3e-06 Score=63.74 Aligned_cols=64 Identities=23% Similarity=0.280 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhcC-C-CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVS-P-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAK 76 (152)
Q Consensus 2 ieeAIs~le~AL~id-P-~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~K 76 (152)
+.++|..|++.+..+ | ..-+.+|.|+.+++++| +|++|..|++..|+++|+|...+...++.++
T Consensus 54 ~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg-----------~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 54 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK-----------EYEKALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 457999999999987 6 68899999999999875 9999999999999999999988888777665
No 152
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.15 E-value=2.6e-06 Score=68.34 Aligned_cols=72 Identities=25% Similarity=0.351 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHhcCCCCh------HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHH-----cC-CCcH---
Q 031849 1 MILDAISKLEEALMVSPNRH------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD-----EE-PSNE--- 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~------dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAle-----ld-P~Ne--- 65 (152)
.+++|+..|++||++.++.. .+++|||.+|..+| ++++|+++|++|++ .+ |.+.
T Consensus 199 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-----------~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 267 (383)
T 3ulq_A 199 QYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQS-----------QYEDAIPYFKRAIAVFEESNILPSLPQAY 267 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 37899999999999977665 49999999999764 99999999999999 45 5442
Q ss_pred -----------HHHHHHHHHHcCchhhHH
Q 031849 66 -----------LYQKSLEVAAKAPELHME 83 (152)
Q Consensus 66 -----------~Y~ksLe~~~Kapelh~e 83 (152)
.|.++++.+.++.++..+
T Consensus 268 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 268 FLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 256666777776666433
No 153
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.13 E-value=4.2e-06 Score=65.26 Aligned_cols=50 Identities=22% Similarity=0.141 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHhcCCCCh----HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC
Q 031849 1 MILDAISKLEEALMVSPNRH----DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~----dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld 61 (152)
.+++|+..|+++++++|++. .++++||.+|...| ++++|+.+|++|+++.
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 24 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLH-----------DYAKALEYHHHDLTLA 77 (406)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHH
Confidence 37899999999999999984 68999999998754 9999999999998883
No 154
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.12 E-value=4.8e-06 Score=52.63 Aligned_cols=39 Identities=31% Similarity=0.598 Sum_probs=33.3
Q ss_pred CC-CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 16 SP-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 16 dP-~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
|| .+.+++++||.+|... +++++|+.+|++|++++|++.
T Consensus 4 ~~~~~~~~~~~la~~~~~~-----------~~~~~A~~~~~~a~~~~~~~~ 43 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQ-----------GDYDEAIEYYQKALELDPNNA 43 (91)
T ss_dssp --CHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCH
T ss_pred cccccHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHhcCCCCH
Confidence 44 4678999999999875 499999999999999999986
No 155
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.11 E-value=2.7e-06 Score=55.50 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=33.2
Q ss_pred ChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 19 RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 19 ~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+.++++++|+++... ++|++|+++|++|++++|++..
T Consensus 3 ~~~~~~~~g~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~ 39 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQ-----------GLYREAVHCYDQLITAQPQNPV 39 (111)
T ss_dssp HHHHHHHHHHHHHTT-----------TCHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhcCCCCHH
Confidence 468899999999975 4999999999999999999864
No 156
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.11 E-value=8.3e-06 Score=72.47 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH---------------H
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------L 66 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne---------------~ 66 (152)
+++|+..++++|++||++..||++.|.++..++. .++++|+++|++|+++||.|- .
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~---------~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~ 159 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE---------PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 159 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSS---------CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc---------ccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCC
Confidence 7899999999999999999999999999987652 268999999999999999984 3
Q ss_pred HHHHHHHHHcCchhhHH
Q 031849 67 YQKSLEVAAKAPELHME 83 (152)
Q Consensus 67 Y~ksLe~~~Kapelh~e 83 (152)
|.+.++.+.++.++|+.
T Consensus 160 ~~~el~~~~~~I~~~p~ 176 (567)
T 1dce_A 160 PAEELAFTDSLITRNFS 176 (567)
T ss_dssp HHHHHHHHHTTTTTTCC
T ss_pred hHHHHHHHHHHHHHCCC
Confidence 66788888898888764
No 157
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.10 E-value=6.7e-07 Score=60.18 Aligned_cols=52 Identities=21% Similarity=0.212 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHhcCCCCh------HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMVSPNRH------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~------dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++++++.++.. .++++||.+|...| ++++|+++|++|+++.++
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 24 NFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLG-----------EFETASEYYKKTLLLARQ 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHH
Confidence 37899999999999987755 48999999999754 999999999999988664
No 158
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.10 E-value=5.3e-06 Score=73.74 Aligned_cols=81 Identities=11% Similarity=0.135 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne---------------- 65 (152)
.+||+..++++|++||++..||++.|.++..++. ..+.++....+++|+++|++|++++|+|.
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~-~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~ 123 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQHLET-EKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP 123 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHhccc-ccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccc
Confidence 4789999999999999999999999999988752 12233444559999999999999999995
Q ss_pred HHHHHHHHHHcCchhhHH
Q 031849 66 LYQKSLEVAAKAPELHME 83 (152)
Q Consensus 66 ~Y~ksLe~~~Kapelh~e 83 (152)
.|.+.++.++|+.++++.
T Consensus 124 ~~~~el~~~~k~l~~d~~ 141 (567)
T 1dce_A 124 NWARELELCARFLEADER 141 (567)
T ss_dssp CHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHhhccc
Confidence 257888888888887643
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.07 E-value=2.2e-06 Score=67.02 Aligned_cols=52 Identities=10% Similarity=0.120 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHH---hcCCCCh----HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEAL---MVSPNRH----DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL---~idP~~~----dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++|| +..|++. .+++|+|.+|..+| +|++|+++|++|+++.++
T Consensus 170 ~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~-----------~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 170 YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS-----------RYEESLYQVNKAIEISCR 228 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHh-----------hHHHHHHHHHHHHHHHHh
Confidence 3789999999999 5566643 69999999999764 999999999999998764
No 160
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.07 E-value=3.8e-06 Score=63.88 Aligned_cols=76 Identities=16% Similarity=0.144 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHh----cccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH------HH---
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTS----HAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE------LY--- 67 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~----~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne------~Y--- 67 (152)
.+++|+..|+++++++ +.+++++||.+|.. .+ ++++|+++|++|++++|... .|
T Consensus 165 ~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~-----------~~~~A~~~~~~a~~~~~~~a~~~l~~~~~~g 231 (273)
T 1ouv_A 165 DLKKALASYDKACDLK--DSPGCFNAGNMYHHGEGATK-----------NFKEALARYSKACELENGGGCFNLGAMQYNG 231 (273)
T ss_dssp CHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTCSSCC-----------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCCc-----------cHHHHHHHHHHHHhCCCHHHHHHHHHHHHcC
Confidence 3688999999999874 67899999999988 54 89999999999999988542 23
Q ss_pred -------HHHHHHHHcCchhhHHHHhhhh
Q 031849 68 -------QKSLEVAAKAPELHMEIHKHGL 89 (152)
Q Consensus 68 -------~ksLe~~~Kapelh~e~~~~~~ 89 (152)
.++++.+.++.++.++-....+
T Consensus 232 ~~~~~~~~~A~~~~~~a~~~~~~~a~~~l 260 (273)
T 1ouv_A 232 EGVTRNEKQAIENFKKGCKLGAKGACDIL 260 (273)
T ss_dssp SSSSCCSTTHHHHHHHHHHHTCHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3577888888777666555444
No 161
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.06 E-value=1.1e-06 Score=68.80 Aligned_cols=77 Identities=10% Similarity=0.033 Sum_probs=58.5
Q ss_pred CHHHHHHHHHHHHh-------cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH--------
Q 031849 1 MILDAISKLEEALM-------VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE-------- 65 (152)
Q Consensus 1 mieeAIs~le~AL~-------idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne-------- 65 (152)
.+++|+..|++||+ .++....+++|||.+|..+| +|++|+++|++|+++.+++.
T Consensus 170 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~-----------~y~~A~~~~~~al~~~~~~~~~~~~~~~ 238 (293)
T 3u3w_A 170 YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS-----------RYEESLYQVNKAIEISCRINSMALIGQL 238 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHTTBCTTHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHh-----------HHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 37899999999994 33445568999999999864 99999999999999987541
Q ss_pred -------------HHHHHHHHHHcCchhhHHHHhhh
Q 031849 66 -------------LYQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 66 -------------~Y~ksLe~~~Kapelh~e~~~~~ 88 (152)
.|.++++.+.+|.++-..+....
T Consensus 239 ~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~~~~ 274 (293)
T 3u3w_A 239 YYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHA 274 (293)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCTG
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCCHH
Confidence 14667777777776666554433
No 162
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.06 E-value=1.6e-06 Score=69.47 Aligned_cols=53 Identities=13% Similarity=0.026 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHHhc------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 1 MILDAISKLEEALMV------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 1 mieeAIs~le~AL~i------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+++|+..|++|+++ ++...+++++||.+|...| ++++|+++|++|+++.+++
T Consensus 118 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~-----------~~~~A~~~~~~al~~~~~~ 176 (383)
T 3ulq_A 118 EYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMK-----------QTYFSMDYARQAYEIYKEH 176 (383)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHhC
Confidence 378999999999998 4446789999999999754 9999999999999986643
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.05 E-value=1.4e-06 Score=69.20 Aligned_cols=52 Identities=13% Similarity=0.081 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~------~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|++||++.|+. ..++.+||.+|..+| +|++|+.+|++|+++.|++
T Consensus 131 ~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g-----------~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQ-----------KFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHHc
Confidence 678888888888887764 567888888888654 8888888888888887654
No 164
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.03 E-value=1.2e-05 Score=67.23 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhcC--CC-ChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHH
Q 031849 2 ILDAISKLEEALMVS--PN-RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSL 71 (152)
Q Consensus 2 ieeAIs~le~AL~id--P~-~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksL 71 (152)
+++|+..|++++.-+ |. ..+++|++|.++..+| +.++|..+|+++++.+|+ +....+|
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lG-----------r~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQG-----------NESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 455555555555332 43 4445555555555433 555555555555555555 4444444
No 165
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.98 E-value=3.6e-05 Score=64.96 Aligned_cols=80 Identities=10% Similarity=0.047 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhcCCCCh-HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH---------------
Q 031849 2 ILDAISKLEEALMVSPNRH-DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE--------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~-dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne--------------- 65 (152)
+++|+..|+++|+++|+++ .+|.++|+++... +++++|..+|++|++..|.+.
T Consensus 337 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-----------~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~ 405 (530)
T 2ooe_A 337 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA-----------EGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK 405 (530)
T ss_dssp HHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCccccCchHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcC
Confidence 4666677777777776664 4666666666543 477888888888888777531
Q ss_pred -------HHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 66 -------LYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 66 -------~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
.|+++++.....++++..+......+|
T Consensus 406 ~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g 439 (530)
T 2ooe_A 406 DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLN 439 (530)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTT
T ss_pred ChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCC
Confidence 244455555555666666655544333
No 166
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.98 E-value=9.5e-06 Score=69.20 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhcCCC--ChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPN--RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~--~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
..+|...+++||++||+ +..||.-||..|... | .-.-++.++|..+|+|||+++|++
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~v----P--p~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAA----P--ESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHS----C--TTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhC----C--CccCCCHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999 566999999999874 0 000159999999999999999975
No 167
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.98 E-value=1.2e-05 Score=57.31 Aligned_cols=49 Identities=12% Similarity=0.115 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHh------cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 1 MILDAISKLEEALM------VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~le~AL~------idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|+++++ .+|....++++||.+|...| ++++|+++|++|+++
T Consensus 41 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 41 RFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG-----------NWDAARRCFLEEREL 95 (203)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHH
Confidence 36899999999999 66777889999999998754 899999999999998
No 168
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.97 E-value=2.6e-06 Score=63.98 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHhc--------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMV--------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~i--------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++++++ +|....++++||.+|... +++++|+++|++++++.|+
T Consensus 168 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 168 KYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQ-----------GKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHHHHH
Confidence 378999999999999 888899999999999875 4999999999999987554
No 169
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.94 E-value=2e-05 Score=66.57 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHh-cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 3 LDAISKLEEALM-VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 3 eeAIs~le~AL~-idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
++|+..|++|++ ++|++..+|+++|.++...| ++++|..+|++|++++|++.
T Consensus 303 ~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g-----------~~~~A~~~~~~al~~~p~~~ 355 (530)
T 2ooe_A 303 DEAANIYERAISTLLKKNMLLYFAYADYEESRM-----------KYEKVHSIYNRLLAIEDIDP 355 (530)
T ss_dssp HHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHSSSSCH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHhCccccCc
Confidence 489999999997 89999999999999998754 99999999999999999884
No 170
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.93 E-value=1.8e-05 Score=68.82 Aligned_cols=58 Identities=9% Similarity=0.019 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKS 70 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ks 70 (152)
.+++|+..+++||.+||+ ..+|..||.++...| ++++|++.|++|+.++|..+.|.-.
T Consensus 292 d~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G-----------~~~eA~e~~~~AlrL~P~~~t~~~~ 349 (372)
T 3ly7_A 292 KTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKG-----------MNREAADAYLTAFNLRPGANTLYWI 349 (372)
T ss_dssp CHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHSCSHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCcChHHHH
Confidence 368999999999999975 788899999998754 9999999999999999999876543
No 171
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.92 E-value=1.6e-05 Score=59.66 Aligned_cols=50 Identities=16% Similarity=0.097 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHhc--------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC
Q 031849 1 MILDAISKLEEALMV--------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 1 mieeAIs~le~AL~i--------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld 61 (152)
.+++|+..|++++++ +|....++++||.+|...| ++++|+.+|++|+++-
T Consensus 42 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~ 99 (311)
T 3nf1_A 42 RYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN-----------KYKDAANLLNDALAIR 99 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHH
Confidence 378999999999995 7888999999999999754 8899999999998873
No 172
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.91 E-value=2.8e-05 Score=59.55 Aligned_cols=66 Identities=12% Similarity=0.103 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhcCC-CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCc
Q 031849 2 ILDAISKLEEALMVSP-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAP 78 (152)
Q Consensus 2 ieeAIs~le~AL~idP-~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kap 78 (152)
+.++|..|++.++.+| ..-|.+|.|+.+++++| +|++|..|-++.|+++|+|...+...++.++..
T Consensus 59 ~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklg-----------dY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ki 125 (134)
T 3o48_A 59 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLG-----------EYSMAKRYVDTLFEHERNNKQVGALKSMVEDKI 125 (134)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999 56899999999999865 999999999999999999999888887776543
No 173
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.90 E-value=2.4e-05 Score=59.10 Aligned_cols=52 Identities=27% Similarity=0.197 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhcCC--CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVSP--NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~le~AL~idP--~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
+++|+..|++|++++| ++.+|+++||.+|..-.- ...++++|+.+|++|+++
T Consensus 105 ~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g-------~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 105 VAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVH-------GPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSS-------SSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCC-------CCCCHHHHHHHHHHHHHc
Confidence 4556666666666665 345666666666653100 013566666666666665
No 174
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.89 E-value=3.8e-05 Score=58.29 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld 61 (152)
+++|+..|+++++ |++.+++++||.+|.. |.- ..+++++|+++|++|++++
T Consensus 22 ~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~-g~~------~~~~~~~A~~~~~~a~~~~ 72 (273)
T 1ouv_A 22 FTQAKKYFEKACD--LKENSGCFNLGVLYYQ-GQG------VEKNLKKAASFYAKACDLN 72 (273)
T ss_dssp HHHHHHHHHHHHH--TTCHHHHHHHHHHHHH-TSS------SCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH--CCCHHHHHHHHHHHHc-CCC------cCCCHHHHHHHHHHHHHCC
Confidence 6788888888887 7778888888888875 000 0237888888888888876
No 175
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.88 E-value=5e-05 Score=58.77 Aligned_cols=65 Identities=12% Similarity=0.118 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhcCC-CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcC
Q 031849 2 ILDAISKLEEALMVSP-NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKA 77 (152)
Q Consensus 2 ieeAIs~le~AL~idP-~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Ka 77 (152)
+.++|..|++.+..+| ..-|.+|.|+.+++++| +|++|..|-+..|+++|+|...+...++.++.
T Consensus 58 i~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~-----------~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~ 123 (144)
T 1y8m_A 58 ERLGVKILTDIYKEAESRRRECLYYLTIGCYKLG-----------EYSMAKRYVDTLFEHERNNKQVGALKSMVEDK 123 (144)
T ss_dssp HHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTT-----------CHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 4689999999999998 57899999999999865 99999999999999999999888777776643
No 176
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.87 E-value=1.9e-05 Score=63.52 Aligned_cols=52 Identities=15% Similarity=0.100 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~-----idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++|++ .+|....++++||.+|..+| ++++|+++|++|+++.+.
T Consensus 237 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 237 DDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAG-----------QTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHH
Confidence 36788888888888 78888888888888888754 888888888888888553
No 177
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.86 E-value=1.2e-05 Score=62.55 Aligned_cols=52 Identities=23% Similarity=0.261 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhcCCCChH------HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHD------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~d------AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|+..|++++++.|+..+ ++++||.+|...| ++++|+.+|++|+++.|++
T Consensus 203 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~~ 260 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLG-----------EFETASEYYKKTLLLARQL 260 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC-----------ChHHHHHHHHHHHHHHHhC
Confidence 67899999999988887766 8999999988654 7888888888888776654
No 178
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.83 E-value=7.6e-06 Score=65.81 Aligned_cols=52 Identities=15% Similarity=0.029 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHHhcC------CCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMVS------PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~id------P~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++|+++- +...+++++||.+|...| ++++|+.+|++|+++.+.
T Consensus 116 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~-----------~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 116 EYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMK-----------QTHVSMYHILQALDIYQN 173 (378)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcC-----------CcHHHHHHHHHHHHHHHh
Confidence 3789999999999873 346779999999999754 999999999999988664
No 179
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.82 E-value=7e-06 Score=61.31 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHhc------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMV------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~i------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|++++++ +|....++++||.+|...| ++++|+++|++|+++.|+
T Consensus 58 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 58 DYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG-----------NFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHHHHH
Confidence 368999999999988 6777889999999998754 899999999999988664
No 180
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.82 E-value=2.4e-05 Score=65.04 Aligned_cols=74 Identities=11% Similarity=0.019 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHH----HhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH----------
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAH----TSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL---------- 66 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy----~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~---------- 66 (152)
.+++|+..++++|.+||++..+|++.|.++ ...+- ..++++++++++++++++|.|..
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~--------~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~ 155 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNN--------DFDPYREFDILEAMLSSDPKNHHVWSYRKWLVD 155 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTT--------CCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccc--------cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 378999999999999999999999999999 43210 14788999999999999999862
Q ss_pred ----HH--HHHHHHHcCchhhH
Q 031849 67 ----YQ--KSLEVAAKAPELHM 82 (152)
Q Consensus 67 ----Y~--ksLe~~~Kapelh~ 82 (152)
|. +.++.+++..++|+
T Consensus 156 ~l~~~~~~~EL~~~~~~i~~d~ 177 (306)
T 3dra_A 156 TFDLHNDAKELSFVDKVIDTDL 177 (306)
T ss_dssp HTTCTTCHHHHHHHHHHHHHCT
T ss_pred HhcccChHHHHHHHHHHHHhCC
Confidence 33 55666666665554
No 181
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.81 E-value=1.3e-05 Score=63.53 Aligned_cols=53 Identities=8% Similarity=-0.004 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhcCCCCh------HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRH------DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~------dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|++.|++. .++.++|.+|..+ +++++|+.+|++++ ++|++.
T Consensus 170 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~-----------g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 170 KFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHR-----------ADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHT-TSTTST
T ss_pred CHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHh-CCCCCC
Confidence 47899999999999987664 4788888888864 49999999999999 999764
No 182
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.81 E-value=2.7e-05 Score=67.61 Aligned_cols=53 Identities=8% Similarity=-0.071 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhc-----CCCCh---HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc-----CCCcH
Q 031849 2 ILDAISKLEEALMV-----SPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~i-----dP~~~---dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel-----dP~Ne 65 (152)
|++|+..|+++|++ -|+|+ .++.|||.+|..+| +|++|..+|+|||++ -|+|+
T Consensus 314 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g-----------~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 314 PSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQ-----------DWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhc-----------CHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 68999999999975 55665 55899999999865 888888888888865 67776
No 183
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.78 E-value=9.1e-06 Score=58.02 Aligned_cols=51 Identities=8% Similarity=-0.034 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHHhc---CC----CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC
Q 031849 1 MILDAISKLEEALMV---SP----NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~le~AL~i---dP----~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP 62 (152)
.+++|+..|++++++ .+ ....++++||.+|..+ +++++|..+|++|+++.+
T Consensus 81 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 81 NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHF-----------GDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHHHH
Confidence 378999999999998 44 3457799999999875 499999999999997643
No 184
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.77 E-value=2.6e-05 Score=52.24 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHhcCCCC------hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC
Q 031849 1 MILDAISKLEEALMVSPNR------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~------~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP 62 (152)
.+++|+..|++++++.++. ..++++||.+|...| ++++|+++|++|+++.+
T Consensus 64 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 64 EFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQ-----------DYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHH
Confidence 3789999999999987764 678999999998754 99999999999998754
No 185
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.77 E-value=1.4e-05 Score=63.34 Aligned_cols=49 Identities=14% Similarity=0.131 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHHhc------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 1 MILDAISKLEEALMV------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~le~AL~i------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
.+++|+..|++++++ +|....++++||.+|...| ++++|+.+|++|+++
T Consensus 101 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 101 DYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMG-----------RFDEAAICCERHLTL 155 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHH
Confidence 368899999999988 7888899999999998754 888888888888888
No 186
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.75 E-value=5.5e-05 Score=64.08 Aligned_cols=54 Identities=7% Similarity=-0.090 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+++++..++++|++||++..||++.|.++..+|. .++++++|+++++++||.|.
T Consensus 126 ~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~----------~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 126 WARELELCARFLEADERNFHCWDYRRFVAAQAAV----------APAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC----------CHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCc----------CHHHHHHHHHHHHHHCCCCH
Confidence 4667777777777777777777777777665441 36889999999999999884
No 187
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.75 E-value=5.1e-05 Score=63.12 Aligned_cols=55 Identities=7% Similarity=-0.108 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.++|+..++++|++||++..||+..|.++..++. .++++|+++++++|.+||+|.
T Consensus 49 s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~---------~~~~eeL~~~~~~L~~nPk~y 103 (306)
T 3dra_A 49 SERALHITELGINELASHYTIWIYRFNILKNLPN---------RNLYDELDWCEEIALDNEKNY 103 (306)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTT---------SCHHHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHccc---------ccHHHHHHHHHHHHHHCcccH
Confidence 3789999999999999999999999999987641 389999999999999999985
No 188
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.73 E-value=5.1e-05 Score=64.30 Aligned_cols=73 Identities=11% Similarity=0.041 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH---------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL--------------- 66 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~--------------- 66 (152)
+++++..++++|.+||++..+|++.|.++..++. ..++++++++.+++++||.|-.
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~---------~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~ 160 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE---------PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 160 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSS---------CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCc---------ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcC
Confidence 6789999999999999999999999999987652 1589999999999999999952
Q ss_pred HHHHHHHHHcCchhhHH
Q 031849 67 YQKSLEVAAKAPELHME 83 (152)
Q Consensus 67 Y~ksLe~~~Kapelh~e 83 (152)
+...++.++++.++|+.
T Consensus 161 ~~eel~~~~~~I~~~p~ 177 (331)
T 3dss_A 161 PAEELAFTDSLITRNFS 177 (331)
T ss_dssp HHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHCCC
Confidence 46777777777776653
No 189
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.73 E-value=0.00015 Score=54.64 Aligned_cols=62 Identities=8% Similarity=-0.012 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhccc--CCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAF--LTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~--l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~ 73 (152)
+++|+..|++|+++ |.+..++++||.+|....- + ..++++|+.+|++|++.. ++.....|..
T Consensus 145 ~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~-------~~d~~~A~~~~~~A~~~g--~~~A~~~l~~ 208 (212)
T 3rjv_A 145 DVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFI-------EPNKQKALHWLNVSCLEG--FDTGCEEFDR 208 (212)
T ss_dssp HHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTB-------CCCHHHHHHHHHHHHHHT--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCC-------CCCHHHHHHHHHHHHHcC--CHHHHHHHHH
Confidence 68999999999999 8888999999999975310 1 238999999999999985 4444444443
No 190
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.73 E-value=1.1e-05 Score=52.59 Aligned_cols=46 Identities=7% Similarity=0.115 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+++|+..|+++|+++|++.+++++ ..+++|+.+|++++..+|++.
T Consensus 50 ~~~~A~~~~~~al~~~p~~~~~~~~-------------------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 50 DWQKALNNYQSAIELNPDSPALQAR-------------------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp CHHHHHHHHHHHHHHCTTSTHHHHH-------------------HHHHHHHHHHCCTTHHHHCCS
T ss_pred CHHHHHHHHHHHHhcCCCcHHHHHH-------------------HHHHHHHHHHHHHhccCcccc
Confidence 4789999999999999999998855 278889999999999999874
No 191
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.70 E-value=5.8e-05 Score=64.62 Aligned_cols=54 Identities=9% Similarity=-0.052 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.++|+..++++|++||++..+|+..|.++..++ ..+++++++++++|.++|+|.
T Consensus 70 se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~----------~~l~eEL~~~~~~L~~nPKny 123 (349)
T 3q7a_A 70 SERALELTEIIVRMNPAHYTVWQYRFSLLTSLN----------KSLEDELRLMNEFAVQNLKSY 123 (349)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----------CCHHHHHHHHHHHHHTTCCCH
T ss_pred CHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHhCCCcH
Confidence 368999999999999999999999999998754 258889999999999999885
No 192
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.65 E-value=6.1e-05 Score=65.43 Aligned_cols=63 Identities=6% Similarity=-0.078 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhc-----CCCChH---HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc-----CCCcHHH
Q 031849 1 MILDAISKLEEALMV-----SPNRHD---TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNELY 67 (152)
Q Consensus 1 mieeAIs~le~AL~i-----dP~~~d---AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel-----dP~Ne~Y 67 (152)
.+++|+..|+++|++ -|+|++ .|+|||.+|..+| ++++|..+|+||+++ -|+|+..
T Consensus 355 ~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg-----------~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 355 DWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLE-----------NKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhcc-----------CHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 378999999999965 455555 5999999999876 777777777777764 6999988
Q ss_pred HHHHHHH
Q 031849 68 QKSLEVA 74 (152)
Q Consensus 68 ~ksLe~~ 74 (152)
+++....
T Consensus 424 ~~l~~~l 430 (433)
T 3qww_A 424 SEIKQEI 430 (433)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877643
No 193
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.60 E-value=9e-05 Score=65.32 Aligned_cols=54 Identities=15% Similarity=0.166 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHhc-----CCCCh---HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc-----CCCcH
Q 031849 1 MILDAISKLEEALMV-----SPNRH---DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~i-----dP~~~---dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel-----dP~Ne 65 (152)
.|++|+..|+++|++ -|+|+ .++.|||.+|..+| +|++|..+|+|||++ -|+|+
T Consensus 324 ~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g-----------~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 324 LYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQ-----------AYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 378999999999975 34554 56999999999865 888888888888865 57775
No 194
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.57 E-value=0.00021 Score=51.15 Aligned_cols=49 Identities=20% Similarity=0.210 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHh-cccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTS-HAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~-~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
+++|+..|++|.+. .+.+|+++||.+|.. .|. ..++++|+++|++|.+.
T Consensus 41 ~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~--------~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 41 KQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYV--------KKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSS--------CCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCC--------CccHHHHHHHHHHHHcC
Confidence 45688888888876 677888888888865 221 13777788888887776
No 195
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.57 E-value=8.2e-05 Score=64.16 Aligned_cols=54 Identities=11% Similarity=0.110 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHHhc-----CCCC---hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc-----CCCcH
Q 031849 1 MILDAISKLEEALMV-----SPNR---HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNE 65 (152)
Q Consensus 1 mieeAIs~le~AL~i-----dP~~---~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel-----dP~Ne 65 (152)
++++|+..|+++|++ -|+| ..++.|||.+|..+| +|++|+.+|+|+|++ -|+|+
T Consensus 302 ~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g-----------~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 302 KWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLG-----------LLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp CHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred cHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhc-----------cHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 478999999999975 3555 456899999998765 888888888888865 57776
No 196
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.53 E-value=0.00012 Score=64.52 Aligned_cols=66 Identities=9% Similarity=-0.004 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHhc-----CCCChH---HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHH-----cCCCcHHH
Q 031849 1 MILDAISKLEEALMV-----SPNRHD---TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD-----EEPSNELY 67 (152)
Q Consensus 1 mieeAIs~le~AL~i-----dP~~~d---AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAle-----ldP~Ne~Y 67 (152)
.+++|+..|+++|++ -|+|++ +++|||.+|..+| ++++|..+|+||++ +-|+|+..
T Consensus 366 ~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G-----------~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 434 (490)
T 3n71_A 366 AYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAG-----------HIEVGHGMICKAYAILLVTHGPSHPIT 434 (490)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHTCTTSHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHHHhCCCChHH
Confidence 478999999999975 456654 5899999999876 77778888887776 47999988
Q ss_pred HHHHHHHHcC
Q 031849 68 QKSLEVAAKA 77 (152)
Q Consensus 68 ~ksLe~~~Ka 77 (152)
.+.+.+...+
T Consensus 435 ~~~~~~l~~~ 444 (490)
T 3n71_A 435 KDLEAMRMQT 444 (490)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877665543
No 197
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.52 E-value=0.00012 Score=63.01 Aligned_cols=65 Identities=11% Similarity=0.116 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHhc-----CCCChH---HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc-----CCCcHHH
Q 031849 1 MILDAISKLEEALMV-----SPNRHD---TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-----EPSNELY 67 (152)
Q Consensus 1 mieeAIs~le~AL~i-----dP~~~d---AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel-----dP~Ne~Y 67 (152)
.+++|+..++++|++ -|+|++ .++|||.+|..+| ++++|..+|+||+++ -|+|+.+
T Consensus 344 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g-----------~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 412 (429)
T 3qwp_A 344 LLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQG-----------MFPQAMKNLRLAFDIMRVTHGREHSLI 412 (429)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHHHHTCTTSHHH
T ss_pred cHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 378999999999965 356655 5999999999876 677777777777654 8999999
Q ss_pred HHHHHHHHc
Q 031849 68 QKSLEVAAK 76 (152)
Q Consensus 68 ~ksLe~~~K 76 (152)
++.+.....
T Consensus 413 ~~~~~~l~~ 421 (429)
T 3qwp_A 413 EDLILLLEE 421 (429)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988765543
No 198
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.52 E-value=0.00018 Score=62.52 Aligned_cols=85 Identities=14% Similarity=-0.035 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCch---HH------------------------------HHHhHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQ---DE------------------------------AKEYFN 48 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~---~~------------------------------A~~~~e 48 (152)
+.+|+..|++||++||+++.||--|+.+|.-+....+.. .+ -+++++
T Consensus 215 ~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d 294 (372)
T 3ly7_A 215 LNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTD 294 (372)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCCHH
Confidence 478999999999999999999999888884221111100 00 135999
Q ss_pred HHHHHHHHHHHcCCCcHH-------------HHHHHHHHHcCchhhHHHHh
Q 031849 49 KATLYFQQAVDEEPSNEL-------------YQKSLEVAAKAPELHMEIHK 86 (152)
Q Consensus 49 kA~~~FqkAleldP~Ne~-------------Y~ksLe~~~Kapelh~e~~~ 86 (152)
+|+.+++||+++||+... ++.+++.+.+|..|.+-...
T Consensus 295 ~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 295 ESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 999999999999987542 45666777777777665543
No 199
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.49 E-value=0.0001 Score=50.93 Aligned_cols=43 Identities=19% Similarity=0.149 Sum_probs=36.1
Q ss_pred CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 16 SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 16 dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+|+++++++.+|.+++..+- ....++|..+|++||++||+|..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~--------~~~~~~A~~~l~~AL~~dp~~~r 44 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHK--------QAMTDEVSLLLEQALQLEPYNEA 44 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTT--------TCCCHHHHHHHHHHHHHCTTCHH
T ss_pred CCCCHHHHHHHHHHHHHhcC--------CCCCHHHHHHHHHHHHHCcCCHH
Confidence 79999999999999975430 12379999999999999999974
No 200
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.47 E-value=0.0003 Score=60.18 Aligned_cols=66 Identities=12% Similarity=0.090 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH---HHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL---YQKSL 71 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~---Y~ksL 71 (152)
++++++.++++|++||.+..||++.|.++..++.... -...++++++++++|+.++|+|+. |++.+
T Consensus 183 ~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~----~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~L 251 (349)
T 3q7a_A 183 WGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAET----SSRSLQDELIYILKSIHLIPHNVSAWNYLRGF 251 (349)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCC----CHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcccccc----chHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4599999999999999999999999999987652110 124589999999999999999984 54443
No 201
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.46 E-value=0.00068 Score=48.42 Aligned_cols=45 Identities=18% Similarity=0.076 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld 61 (152)
+++|+..|+++.+.+ +.++. ||..|... ..+++|+++|++|.+.+
T Consensus 11 ~~~A~~~~~~aa~~g--~~~a~--lg~~y~~g-----------~~~~~A~~~~~~Aa~~g 55 (138)
T 1klx_A 11 LKKAIQYYVKACELN--EMFGC--LSLVSNSQ-----------INKQKLFQYLSKACELN 55 (138)
T ss_dssp HHHHHHHHHHHHHTT--CTTHH--HHHHTCTT-----------SCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCC--CHhhh--HHHHHHcC-----------CCHHHHHHHHHHHHcCC
Confidence 567888888888776 44455 88777642 25666888888887773
No 202
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.39 E-value=0.00022 Score=59.59 Aligned_cols=52 Identities=13% Similarity=0.044 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHh-cccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTS-HAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~-~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
+++|+..|++|++.+ +.+++++||.+|.. .| ..+++++|..+|++|++.+|+
T Consensus 383 ~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g--------~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 383 EQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLG--------VERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSS--------SCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCC--------CCCCHHHHHHHHHHHHHCCCC
Confidence 456666666666543 46666666666653 11 024777777777777777744
No 203
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.29 E-value=0.00022 Score=56.37 Aligned_cols=52 Identities=15% Similarity=0.000 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHhcCCCChH-----HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMVSPNRHD-----TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~d-----AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..++++|.+.|..+. ++++||.+|... +++++|..+|++|+++.|+
T Consensus 29 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~-----------g~~~~A~~~~~~al~~~~~ 85 (373)
T 1hz4_A 29 NPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCK-----------GELTRSLALMQQTEQMARQ 85 (373)
T ss_dssp CHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhc-----------CcHHHHHHHHHHHHHHHHh
Confidence 368999999999999887754 788999999865 4999999999999998764
No 204
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.17 E-value=0.00096 Score=55.66 Aligned_cols=49 Identities=20% Similarity=0.104 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
+++|+..|+++++. .+.+++++||.+|...|. ..++++|+++|++|++.
T Consensus 312 ~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~--------~~~~~~A~~~~~~a~~~ 360 (490)
T 2xm6_A 312 REQAISWYTKSAEQ--GDATAQANLGAIYFRLGS--------EEEHKKAVEWFRKAAAK 360 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCC--------HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCC--------cccHHHHHHHHHHHHHC
Confidence 45555555555544 344555555555544431 23455555555555554
No 205
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.14 E-value=0.00086 Score=55.87 Aligned_cols=79 Identities=15% Similarity=0.096 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhcCCCC--hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC--CC-cH--HH-------
Q 031849 2 ILDAISKLEEALMVSPNR--HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE--PS-NE--LY------- 67 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~--~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld--P~-Ne--~Y------- 67 (152)
+++|+..|++++...++. .+++++||.++..+| +|++|+.+|++|+.-+ |. .. .|
T Consensus 151 ~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG-----------~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~ 219 (282)
T 4f3v_A 151 WTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLA-----------LFTEAERRLTEANDSPAGEACARAIAWYLAMARR 219 (282)
T ss_dssp HHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHH
Confidence 567777887777653232 568999999998765 9999999999999655 54 32 11
Q ss_pred -----HHHH----HHHHcCchhhHHHHhhhhcccc
Q 031849 68 -----QKSL----EVAAKAPELHMEIHKHGLGQQT 93 (152)
Q Consensus 68 -----~ksL----e~~~Kapelh~e~~~~~~~q~~ 93 (152)
.++. ++....|+ .+....+..+..
T Consensus 220 ~lGr~deA~~~l~~a~a~~P~--~~~~~aL~~~~~ 252 (282)
T 4f3v_A 220 SQGNESAAVALLEWLQTTHPE--PKVAAALKDPSY 252 (282)
T ss_dssp HHTCHHHHHHHHHHHHHHSCC--HHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHhcCCc--HHHHHHHhCCCC
Confidence 2222 33345566 677777766654
No 206
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.00063 Score=54.34 Aligned_cols=52 Identities=10% Similarity=0.029 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHhcCCCChH-----------------HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMVSPNRHD-----------------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~d-----------------AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|++.|+++++++|+..+ |+.+||.+|..+| ++++|+++|++++.+.+.
T Consensus 19 ~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~-----------~~~~a~~~~~~~~~~~~~ 87 (434)
T 4b4t_Q 19 QYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMG-----------AKDKLREFIPHSTEYMMQ 87 (434)
T ss_dssp CHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHT-----------CHHHHHHHHHHTHHHHHT
T ss_pred CHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHH
Confidence 378999999999999998764 6999999999754 888888888888876554
No 207
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.06 E-value=0.00061 Score=58.07 Aligned_cols=52 Identities=12% Similarity=0.025 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcCCCC-hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 2 ILDAISKLEEALMVSPNR-HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~-~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+.|..+|++||+|+|++ .++++..|..|+.. .+++++|..++++|+..+|.
T Consensus 220 ~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~----------~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 220 MEKAHTAFEHLTRYCSAHDPDHHITYADALCIP----------LNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTT----------TTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHh----------cCCHHHHHHHHHHHHcCCCC
Confidence 478999999999999986 99999999998763 24899999999999999887
No 208
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.04 E-value=0.00065 Score=53.62 Aligned_cols=52 Identities=13% Similarity=0.076 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHhcC--------CCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 1 MILDAISKLEEALMVS--------PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 1 mieeAIs~le~AL~id--------P~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
.+++|+..|+++|++. |....++.+||.+|...| ++++|..+|++|+++.|.
T Consensus 108 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 108 FLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWA-----------RLDEAEASARSGIEVLSS 167 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHhhc
Confidence 3789999999999876 445668899999998754 999999999999999886
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.87 E-value=0.0014 Score=50.58 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC-CCc-H--------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE-PSN-E-------------- 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld-P~N-e-------------- 65 (152)
++.+...|++.++.+|.+.++.|++|.++.+.. ...++++++.+|+..++.+ |++ .
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~--------~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~ 85 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSK--------YNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK 85 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCS--------SHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCC--------CHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHcc
Confidence 567889999999999999999999999998643 2568999999999999999 733 2
Q ss_pred HHHHHHHHHHcCchhhH
Q 031849 66 LYQKSLEVAAKAPELHM 82 (152)
Q Consensus 66 ~Y~ksLe~~~Kapelh~ 82 (152)
.|.++++.+++..+..+
T Consensus 86 ~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 86 EYEKALKYVRGLLQTEP 102 (152)
T ss_dssp CHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHhcCC
Confidence 37888877777666665
No 210
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.81 E-value=0.0023 Score=53.96 Aligned_cols=50 Identities=4% Similarity=0.002 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAV 58 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAl 58 (152)
+++|+..|+++++.+|..+.++++||.+|...... ..++++|+.+|++|.
T Consensus 195 ~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~-------~~d~~~A~~~~~~aa 244 (452)
T 3e4b_A 195 QAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLG-------TPDEKTAQALLEKIA 244 (452)
T ss_dssp HHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGS-------SCCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCC-------CCCHHHHHHHHHHHc
Confidence 46788888888888888888888888887532111 236777777777776
No 211
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.80 E-value=0.0041 Score=52.37 Aligned_cols=53 Identities=11% Similarity=-0.055 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 3 eeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
++|...++.++..+|. |+++||.+|...|. ..++++|+++|++|++.+|.+..
T Consensus 162 ~~a~~~~~~a~~~~~~---a~~~Lg~~~~~~g~--------~~~~~~A~~~~~~aa~~g~~~a~ 214 (452)
T 3e4b_A 162 DDVERICKAALNTTDI---CYVELATVYQKKQQ--------PEQQAELLKQMEAGVSRGTVTAQ 214 (452)
T ss_dssp HHHHHHHHHHTTTCTT---HHHHHHHHHHHTTC--------HHHHHHHHHHHHHHHHTTCSCHH
T ss_pred HHHHHHHHHHHcCCHH---HHHHHHHHHHHcCC--------cccHHHHHHHHHHHHHCCCHHHH
Confidence 4455666777666665 99999999987653 34999999999999999998866
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.27 E-value=0.0064 Score=51.27 Aligned_cols=58 Identities=12% Similarity=-0.051 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhc----------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHH
Q 031849 1 MILDAISKLEEALMV----------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKS 70 (152)
Q Consensus 1 mieeAIs~le~AL~i----------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ks 70 (152)
.+++|...|+.++++ +|++++++.|+......+| + +|.++++|+.+++|+|+.-...
T Consensus 226 ~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lg-----------k--~a~~l~~qL~~~~P~hp~i~d~ 292 (310)
T 3mv2_B 226 NIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQG-----------L--DTEDLTNQLVKLDHEHAFIKHH 292 (310)
T ss_dssp CHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTT-----------C--TTHHHHHHHHHTTCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhC-----------h--HHHHHHHHHHHhCCCChHHHHH
Confidence 478999999988877 6999999999998888765 3 7899999999999999865444
Q ss_pred H
Q 031849 71 L 71 (152)
Q Consensus 71 L 71 (152)
.
T Consensus 293 ~ 293 (310)
T 3mv2_B 293 Q 293 (310)
T ss_dssp H
T ss_pred H
Confidence 3
No 213
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.0052 Score=48.95 Aligned_cols=51 Identities=12% Similarity=0.080 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHhc------CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC
Q 031849 1 MILDAISKLEEALMV------SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~le~AL~i------dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP 62 (152)
+|++|+..|++++.+ ++...+++.++|.+|..+ ++|++|..+|++|+.+.+
T Consensus 150 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 150 QYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKL-----------RNLAKSKASLTAARTAAN 206 (434)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh-----------CcHHHHHHHHHHHHHHhh
Confidence 478999999999876 555677999999999875 499999999999998754
No 214
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=95.59 E-value=0.049 Score=40.09 Aligned_cols=68 Identities=21% Similarity=0.249 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH-----HHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL-----YQKSLEVAAK 76 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~-----Y~ksLe~~~K 76 (152)
++.|+..+.+|++.|-. -+..+|...|.+|+++|.+++...|.|+. -++.-+....
T Consensus 15 l~kAi~lv~~Ave~D~a-------------------g~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~R 75 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKA-------------------GNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDR 75 (117)
T ss_dssp HHHHHHHHHHHHHHHHH-------------------TCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc-------------------cCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence 57788888888733111 13356777899999999999998866653 2344466677
Q ss_pred CchhhHHHHhhh
Q 031849 77 APELHMEIHKHG 88 (152)
Q Consensus 77 apelh~e~~~~~ 88 (152)
|=+|...|.+..
T Consensus 76 AE~LK~~l~~~~ 87 (117)
T 2cpt_A 76 AEKLKEYLKNKE 87 (117)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHhhhc
Confidence 767766665443
No 215
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.29 E-value=0.051 Score=48.41 Aligned_cols=61 Identities=13% Similarity=0.066 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEV 73 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~ 73 (152)
++.|...|++|+.++|++..+|..||...... ++.-+|+-||-|++......+..+.+|..
T Consensus 168 ~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~-----------~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~ 228 (497)
T 1ya0_A 168 TSQAESYYRHAAQLVPSNGQPYNQLAILASSK-----------GDHLTTIFYYCRSIAVKFPFPAASTNLQK 228 (497)
T ss_dssp HHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHSSSBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHhcc-----------cccHHHHHHHHHHHhcCCCChhHHHHHHH
Confidence 56899999999999999999999999999864 37788999999999988888887777744
No 216
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.09 E-value=0.046 Score=55.36 Aligned_cols=19 Identities=16% Similarity=0.261 Sum_probs=11.1
Q ss_pred hHHHHHHHHHHHHHcCCCc
Q 031849 46 YFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 46 ~~ekA~~~FqkAleldP~N 64 (152)
+|++|+++|+.|.+.+++.
T Consensus 1149 kyEEAIeyL~mArk~~~e~ 1167 (1630)
T 1xi4_A 1149 NWEELVKYLQMARKKARES 1167 (1630)
T ss_pred CHHHHHHHHHHHHhhcccc
Confidence 5566666666666555543
No 217
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.03 E-value=0.02 Score=44.98 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHhcCCCChH---------HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 1 MILDAISKLEEALMVSPNRHD---------TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~d---------AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
+|+.|+.....++.+..++.+ +++++|+++... ++|.+|..+|++||.+
T Consensus 35 LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~-----------~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 35 LHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHD-----------KEYRNAVSKYTMALQQ 92 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcc-----------cHHHHHHHHHHHHHHH
Confidence 578888888887776655554 899999999864 5999999999998764
No 218
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.89 E-value=0.041 Score=55.67 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP 62 (152)
.++|||+.||++|.+||.|...+..||++|.+.. -++..+++++|...+++.|
T Consensus 1295 ~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~---------peklmEhlk~f~~rini~k 1347 (1630)
T 1xi4_A 1295 YFEELITMLEAALGLERAHMGMFTELAILYSKFK---------PQKMREHLELFWSRVNIPK 1347 (1630)
T ss_pred CHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCC---------HHHHHHHHHHHHHhcccch
Confidence 3799999999999999999999999999998764 4788899999999999888
No 219
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=94.18 E-value=0.17 Score=44.93 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcc------------cCCCchH-------HHHHhHHHHHHHHHHHHHcC
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHA------------FLTPDQD-------EAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g------------~l~~d~~-------~A~~~~ekA~~~FqkAleld 61 (152)
+|++|++.|++| ++..+|-.++.++...| .+.||.. +..++|++|+.+|+++|.+|
T Consensus 163 ~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 163 EYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLE 237 (449)
T ss_dssp CHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred cHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCc
Confidence 478999999999 34544444444443332 0000000 12359999999999999999
Q ss_pred CCcH----------------HHHHHHHHHHcCchhhH
Q 031849 62 PSNE----------------LYQKSLEVAAKAPELHM 82 (152)
Q Consensus 62 P~Ne----------------~Y~ksLe~~~Kapelh~ 82 (152)
+.|. .....++++.+..++..
T Consensus 238 ~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 238 RAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp TCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 9994 35566677777766665
No 220
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=94.15 E-value=0.12 Score=36.23 Aligned_cols=68 Identities=10% Similarity=0.093 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH----HHHHHHHHHc
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL----YQKSLEVAAK 76 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~----Y~ksLe~~~K 76 (152)
|++.|+..+.+|++.|-.. +..+|...|.+|+++|.+|+..+|+... -.+.-+....
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g-------------------~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~R 71 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAES-------------------RYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDR 71 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-------------------CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 5678888888887653221 3356777999999999999999987654 2244566677
Q ss_pred CchhhHHHHhh
Q 031849 77 APELHMEIHKH 87 (152)
Q Consensus 77 apelh~e~~~~ 87 (152)
|=+|...|.+.
T Consensus 72 AE~LK~~l~~~ 82 (93)
T 1wfd_A 72 AENIKKYLDQE 82 (93)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 77777666554
No 221
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.91 E-value=0.029 Score=49.77 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP 62 (152)
.++|||+.|+++|.+++.|...+..||.+|++.. -++..++++.|...+.+.|
T Consensus 222 ~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~---------p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 222 YFEELITMLEAALGLERAHMGMFTELAILYSKFK---------PQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp CHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC---------HHHHHHHHHHHSTTSCHHH
T ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC---------HHHHHHHHHHHHHHhcCcH
Confidence 4789999999999999999999999999999864 4678888888888888888
No 222
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=93.70 E-value=0.076 Score=35.95 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLG 27 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLG 27 (152)
.+++|+..+++||+++|++..++.|++
T Consensus 61 ~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 61 DLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 378999999999999999999999998
No 223
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.53 E-value=0.26 Score=41.34 Aligned_cols=59 Identities=17% Similarity=0.122 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----HHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE----LYQKSL 71 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne----~Y~ksL 71 (152)
+++|++.++..++-+|.+.+.-+.|-..|+-. +++++|.+-.+-+.+++|+.. +||.++
T Consensus 13 L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~-----------G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI 75 (273)
T 1zbp_A 13 LQQALELLIEAIKASPKDASLRSSFIELLCID-----------GDFERADEQLMQSIKLFPEYLPGASQLRHLV 75 (273)
T ss_dssp HHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHhCchhhHHHHHHHHHH
Confidence 68999999999999999999999999998854 599999999999999999884 677775
No 224
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.40 E-value=0.46 Score=39.94 Aligned_cols=66 Identities=18% Similarity=0.177 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH---HHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL---YQKSL 71 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~---Y~ksL 71 (152)
+++|+..+++++..+|-+.++|..|=.+|...| +..+|...|++....+.+-|-++|.-++ |+..|
T Consensus 187 ~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~G----r~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~il 255 (388)
T 2ff4_A 187 ASAVIAELEALTFEHPYREPLWTQLITAYYLSD----RQSDALGAYRRVKTTLADDLGIDPGPTLRALNERIL 255 (388)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTT----CHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 578999999999999999999999999998765 6788888888888888888999998764 55544
No 225
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=93.08 E-value=0.23 Score=41.78 Aligned_cols=47 Identities=21% Similarity=0.239 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC
Q 031849 5 AISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 5 AIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP 62 (152)
|++.|++.++.++....+++.||.+|... +++++|++.+++.++.+|
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~-----------g~~eeAL~~l~~~i~~~~ 131 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAIL-----------GDLDKSLETCVEGIDNDE 131 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHc-----------CCHHHHHHHHHHHhccCC
Confidence 45556666555545555556666666542 366666666666666665
No 226
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=92.93 E-value=0.5 Score=40.78 Aligned_cols=52 Identities=6% Similarity=-0.082 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHH
Q 031849 4 DAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELY 67 (152)
Q Consensus 4 eAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y 67 (152)
.....|+++|...|..++.|+..+.-+... +++++|...|++|+.. |.+..-
T Consensus 197 Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~-----------~~~~~ar~i~erAi~~-P~~~~l 248 (493)
T 2uy1_A 197 RMHFIHNYILDSFYYAEEVYFFYSEYLIGI-----------GQKEKAKKVVERGIEM-SDGMFL 248 (493)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH-CCSSHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhC-CCcHHH
Confidence 356799999999999999988888776653 4899999999999999 988643
No 227
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.78 E-value=0.35 Score=36.07 Aligned_cols=40 Identities=13% Similarity=0.275 Sum_probs=31.8
Q ss_pred chHHHHHhHHHHHHHHHHHHHcCCC-----cHHHHHHHHHHHcCc
Q 031849 39 DQDEAKEYFNKATLYFQQAVDEEPS-----NELYQKSLEVAAKAP 78 (152)
Q Consensus 39 d~~~A~~~~ekA~~~FqkAleldP~-----Ne~Y~ksLe~~~Kap 78 (152)
++++|.+.|.+.+.+++++|.+..+ .+.|.++..|-.|=-
T Consensus 37 ~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~ 81 (116)
T 2dl1_A 37 QKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMK 81 (116)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHH
Confidence 5677889999999999999999885 567777776665543
No 228
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=90.23 E-value=0.52 Score=43.08 Aligned_cols=76 Identities=13% Similarity=0.006 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC---c--------------
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS---N-------------- 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~---N-------------- 64 (152)
++.|...|+++|+..|+..+.+-..+....+ .++.++|-..|++|+...|+ +
T Consensus 486 ~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~-----------~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~ 554 (679)
T 4e6h_A 486 TKTACKVLELGLKYFATDGEYINKYLDFLIY-----------VNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKV 554 (679)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----------HTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHc
Confidence 4678889999999999887755444443333 45899999999999999984 2
Q ss_pred -------HHHHHHHHHHHcCchhhHHHHhhh
Q 031849 65 -------ELYQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 65 -------e~Y~ksLe~~~Kapelh~e~~~~~ 88 (152)
.++++.++...+.+.+..-+.|..
T Consensus 555 G~~~~~~~v~~R~~~~~P~~~~~~~f~~ry~ 585 (679)
T 4e6h_A 555 GSLNSVRTLEKRFFEKFPEVNKLEEFTNKYK 585 (679)
T ss_dssp CCSHHHHHHHHHHHHHSTTCCHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhCCCCcHHHHHHHHhc
Confidence 147788888888888888888865
No 229
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=89.86 E-value=0.37 Score=33.08 Aligned_cols=61 Identities=18% Similarity=0.050 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----HHHHHHHHHHcC
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE----LYQKSLEVAAKA 77 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne----~Y~ksLe~~~Ka 77 (152)
++.|++...+|++.|-.. +..+|...|.+|+++|.+++..+|+.. .-+|.-+..+.|
T Consensus 8 ~~~Ai~lv~~Ave~D~~g-------------------~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RA 68 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEG-------------------KVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRI 68 (83)
T ss_dssp HHHHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 577888888887653221 335667789999999999999888653 223333444555
Q ss_pred chhh
Q 031849 78 PELH 81 (152)
Q Consensus 78 pelh 81 (152)
-+|+
T Consensus 69 E~Lk 72 (83)
T 2v6y_A 69 SYLE 72 (83)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 4443
No 230
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=89.81 E-value=0.87 Score=30.90 Aligned_cols=65 Identities=17% Similarity=0.204 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH----HHHHHHHHHcC
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL----YQKSLEVAAKA 77 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~----Y~ksLe~~~Ka 77 (152)
++.|+..+.+|++.|-. .+..+|...|.+|+++|.+++..+|+... -++.-+....+
T Consensus 10 l~~A~~l~~~Av~~D~~-------------------g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~RA 70 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTA-------------------TQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRA 70 (85)
T ss_dssp HHHHHHHHHHHHHHHHT-------------------TCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc-------------------CCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 56777777777643211 13456777888999999999988876542 22333555555
Q ss_pred chhhHHHH
Q 031849 78 PELHMEIH 85 (152)
Q Consensus 78 pelh~e~~ 85 (152)
=+|...|.
T Consensus 71 E~Lk~~l~ 78 (85)
T 2v6x_A 71 EQLKKHLE 78 (85)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55554443
No 231
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=89.10 E-value=0.62 Score=42.58 Aligned_cols=53 Identities=21% Similarity=0.148 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 3 eeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.|-+..|+++|..||.+.++|..+-....+. +.++.|-..|++||...|....
T Consensus 49 ~d~i~~lE~~l~~np~d~~~W~~yi~~~~~~-----------~~~~~aR~vyEraL~~fP~~~~ 101 (679)
T 4e6h_A 49 SDVIGKLNDMIEEQPTDIFLYVKLLKHHVSL-----------KQWKQVYETFDKLHDRFPLMAN 101 (679)
T ss_dssp SCHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHCcCCHHHHHHHHHHHHhc-----------CcHHHHHHHHHHHHHHCCCCHH
Confidence 3567899999999999999999998887653 4788899999999999998754
No 232
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=86.71 E-value=0.96 Score=31.16 Aligned_cols=45 Identities=18% Similarity=0.041 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
++.|++...+|++.|-.. +..+|...|.+|+++|.+++..+|+..
T Consensus 16 ~~~Ai~lv~~Ave~D~~g-------------------~y~eAl~lY~~aie~l~~alk~e~d~~ 60 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEG-------------------NAEEAITNYKKAIEVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHHHHHHHHTT-------------------CHHHHHHHHHHHHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 467888888886553221 335667788999999999999887653
No 233
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=83.40 E-value=1.3 Score=32.90 Aligned_cols=55 Identities=7% Similarity=0.082 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC-CCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE-PSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld-P~N 64 (152)
+..+...|++++..++...++-|+++.++.... ...+..+++..++..+..+ |++
T Consensus 17 l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~--------~~~d~~~GI~lLe~l~~~~~p~~ 72 (126)
T 1nzn_A 17 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTR--------YNDDIRKGIVLLEELLPKGSKEE 72 (126)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSS--------SHHHHHHHHHHHHHHTTTSCHHH
T ss_pred HHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCC--------CHHHHHHHHHHHHHHHhcCCcch
Confidence 456788899999999999999999999997532 2467788999999999988 633
No 234
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=80.62 E-value=0.33 Score=41.62 Aligned_cols=67 Identities=22% Similarity=0.264 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHH-----HHHHHHH
Q 031849 1 MILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQ-----KSLEVAA 75 (152)
Q Consensus 1 mieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~-----ksLe~~~ 75 (152)
+++.|++..++|++.|-.. +..+|...|.+|+++|.+++..++.|+..+ +.-+..+
T Consensus 7 ~~~~A~~~~~~Av~~D~~g-------------------~~~eA~~~Y~~a~~~l~~~~k~e~~~~~~k~~ir~k~~ey~~ 67 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAG-------------------NYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLD 67 (444)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcC-------------------CHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHH
Confidence 4678888888887765431 123566789999999999998775554432 3334445
Q ss_pred cCchhhHHHHh
Q 031849 76 KAPELHMEIHK 86 (152)
Q Consensus 76 Kapelh~e~~~ 86 (152)
.+-+|...+.+
T Consensus 68 Rae~Lk~~l~k 78 (444)
T 2zan_A 68 RAEKLKEYLKK 78 (444)
T ss_dssp -----------
T ss_pred HHHHHHHHhhc
Confidence 66555555543
No 235
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=76.18 E-value=6.4 Score=27.03 Aligned_cols=28 Identities=11% Similarity=0.073 Sum_probs=21.2
Q ss_pred chHHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 39 DQDEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 39 d~~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+..+|...|.+|+++|.+++..+|+...
T Consensus 31 ~y~eAl~lY~~Aie~ll~alk~e~d~~~ 58 (86)
T 4a5x_A 31 RYPQALVCYQEGIDLLLQVLKGTKDNTK 58 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhhCCCHHH
Confidence 3456777888888888888888886653
No 236
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=75.96 E-value=3.3 Score=38.82 Aligned_cols=44 Identities=14% Similarity=0.195 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQ 56 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~Fqk 56 (152)
+|-|...-++|+.+-|...++|+.|..+|..+ ++||.|+-...-
T Consensus 353 ~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l-----------~d~e~ALLtLNS 396 (754)
T 4gns_B 353 YELALGVSNTSTELALDSFESWYNLARCHIKK-----------EEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT-----------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHHHHh-----------ccHHHHHHHHhc
Confidence 67899999999999999999999999999975 499999865444
No 237
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=74.57 E-value=9.5 Score=31.17 Aligned_cols=51 Identities=22% Similarity=0.236 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHH--h---------------cCCCChHHHHHh-HHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 2 ILDAISKLEEAL--M---------------VSPNRHDTLWCL-GNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 2 ieeAIs~le~AL--~---------------idP~~~dAlynL-GnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
|..|+..++..| + +||.+.+-+|+| |..++.. ++-++|+.+|.+.+...|=
T Consensus 78 YkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~-----------g~r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 78 YKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLS-----------GYREEGIGHYVRSFGKSFL 146 (242)
T ss_dssp HHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHh-----------cCHHHhhhHhhhhcCCccc
Confidence 567888998888 2 457777777776 7777765 4999999999999999884
No 238
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=74.25 E-value=5.7 Score=28.18 Aligned_cols=38 Identities=16% Similarity=0.298 Sum_probs=22.6
Q ss_pred chHHHHHhHHHHHHHHHHHHHcCC--CcHHHHHHHHHHHc
Q 031849 39 DQDEAKEYFNKATLYFQQAVDEEP--SNELYQKSLEVAAK 76 (152)
Q Consensus 39 d~~~A~~~~ekA~~~FqkAleldP--~Ne~Y~ksLe~~~K 76 (152)
++++|.+.|.+.+.+++++|.+.- ..+.|.++-.|-.|
T Consensus 34 ~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~K 73 (89)
T 3eab_A 34 QKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK 73 (89)
T ss_dssp SGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHH
Confidence 455566677777777777777433 34556555544433
No 239
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=73.32 E-value=6.5 Score=30.62 Aligned_cols=40 Identities=15% Similarity=0.071 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkA 57 (152)
++.|.+..++. ++..-|-.||.+-..+| +++-|..||+++
T Consensus 21 l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~g-----------n~~lAe~cy~~~ 60 (177)
T 3mkq_B 21 LDAALDEAKKL-----NDSITWERLIQEALAQG-----------NASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHHHHHH-----CCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-----CCHHHHHHHHHHHHHcC-----------ChHHHHHHHHHh
Confidence 44555544433 56677889999988754 999999999986
No 240
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=73.11 E-value=5.3 Score=35.38 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=27.5
Q ss_pred HHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 21 DTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 21 dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
..+-|||...... +.++.|..||++|+.++|++-
T Consensus 153 r~l~~LGDL~RY~-----------~~~~~A~~~Y~~A~~~~P~~G 186 (497)
T 1ya0_A 153 HCLVHLGDIARYR-----------NQTSQAESYYRHAAQLVPSNG 186 (497)
T ss_dssp HHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHCTTBS
T ss_pred HHHHHcccHHHHH-----------HHHHHHHHHHHHHHHhCCCCC
Confidence 3566788887653 478999999999999999984
No 241
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=72.72 E-value=2.8 Score=28.91 Aligned_cols=15 Identities=13% Similarity=0.463 Sum_probs=8.7
Q ss_pred HHhHHHHHHHHHHHH
Q 031849 44 KEYFNKATLYFQQAV 58 (152)
Q Consensus 44 ~~~~ekA~~~FqkAl 58 (152)
.++|++|+.+|+.||
T Consensus 29 ~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 29 ESRYPQALVCYQEGI 43 (86)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 445666666666555
No 242
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=65.02 E-value=37 Score=29.21 Aligned_cols=61 Identities=13% Similarity=-0.007 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHh--cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHH--cCCCcHHHHHHHHHH
Q 031849 2 ILDAISKLEEALM--VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD--EEPSNELYQKSLEVA 74 (152)
Q Consensus 2 ieeAIs~le~AL~--idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAle--ldP~Ne~Y~ksLe~~ 74 (152)
+++|...|++..+ +.|+ ...|..|=.+|.+.| ++++|.+.|++-.+ +.|+...|.-.+..+
T Consensus 121 ~~~A~~l~~~M~~~g~~Pd-~~tyn~lI~~~~~~g-----------~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~ 185 (501)
T 4g26_A 121 PEMAFDMVKQMKAFGIQPR-LRSYGPALFGFCRKG-----------DADKAYEVDAHMVESEVVPEEPELAALLKVS 185 (501)
T ss_dssp HHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCc-cceehHHHHHHHHCC-----------CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 4556666655553 2332 244555555555433 55566666655444 345555555544443
No 243
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=63.55 E-value=21 Score=25.75 Aligned_cols=37 Identities=30% Similarity=0.343 Sum_probs=22.9
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCc
Q 031849 41 DEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAP 78 (152)
Q Consensus 41 ~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kap 78 (152)
++|.+..++|..|+..|+++- .++..+.+|++-.+..
T Consensus 32 deAIech~kAa~yL~eAmklt-qs~qa~~SLqLQrd~H 68 (97)
T 2crb_A 32 EEAISCHRKATTYLSEAMKLT-ESEQAHLSLELQRDSH 68 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHH
Confidence 445455555555556666776 6777777777665433
No 244
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.09 E-value=3.5 Score=30.59 Aligned_cols=39 Identities=13% Similarity=0.360 Sum_probs=28.6
Q ss_pred HHHhHHHHHHHHHHHHHcCCCc------HHHHHHHHHHHcCchhh
Q 031849 43 AKEYFNKATLYFQQAVDEEPSN------ELYQKSLEVAAKAPELH 81 (152)
Q Consensus 43 A~~~~ekA~~~FqkAleldP~N------e~Y~ksLe~~~Kapelh 81 (152)
.+..+++|..|..+||.+|-.. ++|++.++-++++..+-
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~ 59 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISIS 59 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhcccc
Confidence 4578899999999999887632 36888887776655443
No 245
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=60.51 E-value=5.1 Score=27.43 Aligned_cols=35 Identities=20% Similarity=0.106 Sum_probs=22.5
Q ss_pred HhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCchh
Q 031849 45 EYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPEL 80 (152)
Q Consensus 45 ~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kapel 80 (152)
...++|++..++|++.|-. ..|.+++.++.++.|+
T Consensus 14 ~~~~~Ai~lv~~Ave~D~~-g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 14 MLEEMARKYAINAVKADKE-GNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHH
Confidence 4567888888888888642 3455555555555544
No 246
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=60.19 E-value=3.9 Score=28.39 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCchhhHHHH
Q 031849 46 YFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIH 85 (152)
Q Consensus 46 ~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kapelh~e~~ 85 (152)
..++|++.+++|++.|-. ..|..++.++..+.|+-+...
T Consensus 11 ~l~~Ai~lv~~Ave~D~~-g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAE-SRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH
Confidence 556778888888777643 345555555555555544433
No 247
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=60.17 E-value=33 Score=26.70 Aligned_cols=52 Identities=15% Similarity=0.047 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+++|.+.|+.++.+.-+. |-..+.-|... --++++++|...+.+|+.+.|..
T Consensus 76 ~d~aR~vy~~a~~~hKkF--AKiwi~~AqFE---------iRqgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 76 PDDARDYFQMARANCKKF--AFVHISFAQFE---------LSQGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp GGGCHHHHHHHHHHCTTB--HHHHHHHHHHH---------HHTTCHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHHHhHHH--HHHHHHHHHHH---------HHcccHHHHHHHHHHHhccCCCc
Confidence 577889999999884444 55555555432 22569999999999999999953
No 248
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=59.97 E-value=3.1 Score=30.27 Aligned_cols=15 Identities=27% Similarity=0.450 Sum_probs=8.8
Q ss_pred HhHHHHHHHHHHHHH
Q 031849 45 EYFNKATLYFQQAVD 59 (152)
Q Consensus 45 ~~~ekA~~~FqkAle 59 (152)
++|++|+.+|++|++
T Consensus 32 g~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 32 GNYEEALQLYQHAVQ 46 (117)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH
Confidence 456666666666554
No 249
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=59.62 E-value=9.3 Score=29.62 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=27.1
Q ss_pred HHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 23 LWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 23 lynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
+|.+|..+.. +++|.+|.++|++|+..-|.+
T Consensus 17 ~YYlGr~~~~-----------~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 17 KYYVGRKAMF-----------DSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHH-----------TTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHH-----------HhCHHHHHHHHHHHHHHCCHh
Confidence 7889999885 359999999999999998865
No 250
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=55.83 E-value=12 Score=32.16 Aligned_cols=30 Identities=23% Similarity=0.194 Sum_probs=24.2
Q ss_pred CCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHH
Q 031849 17 PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 17 P~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkA 57 (152)
-++...|-+||.++.+. ++++.|..||+++
T Consensus 678 ~~~~~~W~~la~~al~~-----------~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 678 ESAEMKWRALGDASLQR-----------FNFKLAIEAFTNA 707 (814)
T ss_dssp CCCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHH
T ss_pred hCcHhHHHHHHHHHHHc-----------CCHHHHHHHHHHc
Confidence 34567778999998875 4999999999986
No 251
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=55.79 E-value=69 Score=27.52 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHh--cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHH--cCCCcHHHHHHHHHHHcC
Q 031849 2 ILDAISKLEEALM--VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD--EEPSNELYQKSLEVAAKA 77 (152)
Q Consensus 2 ieeAIs~le~AL~--idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAle--ldP~Ne~Y~ksLe~~~Ka 77 (152)
+++|...|++..+ +.|+ ..+|..|=.+|.+. +++++|.+.|++..+ +.|+-..|--.+..+.+.
T Consensus 86 l~~A~~lf~~M~~~G~~Pd-~~tyn~lI~~~~~~-----------g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~ 153 (501)
T 4g26_A 86 LSRGFDIFKQMIVDKVVPN-EATFTNGARLAVAK-----------DDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRK 153 (501)
T ss_dssp HHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHC
Confidence 5788889988775 3454 46788888888875 499999999998776 578888888888766443
No 252
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=54.87 E-value=13 Score=23.90 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=20.7
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 41 DEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 41 ~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+..+-.|-|++|.+.|++++|++
T Consensus 24 ~D~~ESleVAiqCi~~aF~v~~~d 47 (52)
T 4gof_A 24 SDAQESLEVAIQCLETAFGVTVED 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSC
T ss_pred HhHHHHHHHHHHHHHHHcCCCccc
Confidence 455677899999999999999986
No 253
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=54.57 E-value=12 Score=25.42 Aligned_cols=12 Identities=33% Similarity=0.387 Sum_probs=10.1
Q ss_pred cccCCCCchhhh
Q 031849 111 KKKKSSDLKYDI 122 (152)
Q Consensus 111 k~k~~sd~~ydv 122 (152)
.+++.++|.||.
T Consensus 3 ~~~e~dpF~YDY 14 (67)
T 2jp3_A 3 PVDKGSPFYYDW 14 (67)
T ss_dssp TTSTTSGGGGGG
T ss_pred ccccCCCcccch
Confidence 567899999994
No 254
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=52.79 E-value=26 Score=29.91 Aligned_cols=55 Identities=11% Similarity=-0.071 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELY 67 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y 67 (152)
++.|...|++| +..+..+..| +-.|+.... ..++++.|...|++|++.-|+++.+
T Consensus 302 ~~~AR~i~~~A-~~~~~~~~v~--i~~A~lE~~--------~~~d~~~ar~ife~al~~~~~~~~~ 356 (493)
T 2uy1_A 302 LELFRKLFIEL-GNEGVGPHVF--IYCAFIEYY--------ATGSRATPYNIFSSGLLKHPDSTLL 356 (493)
T ss_dssp HHHHHHHHHHH-TTSCCCHHHH--HHHHHHHHH--------HHCCSHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHh-hCCCCChHHH--HHHHHHHHH--------HCCChHHHHHHHHHHHHHCCCCHHH
Confidence 46788999999 4333333333 223433221 0125899999999999988987643
No 255
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=52.26 E-value=6.4 Score=26.43 Aligned_cols=38 Identities=16% Similarity=0.262 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCchhhHHH
Q 031849 46 YFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEI 84 (152)
Q Consensus 46 ~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kapelh~e~ 84 (152)
..++|+..+.+|++.|-. ..|..++.++..+.|+-+..
T Consensus 9 ~l~~A~~l~~~Av~~D~~-g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTA-TQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHH
Confidence 456677777777766532 34555555555555544433
No 256
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=51.20 E-value=21 Score=33.41 Aligned_cols=43 Identities=12% Similarity=0.019 Sum_probs=36.6
Q ss_pred HHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcHHHHHHHHHHHc
Q 031849 23 LWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAK 76 (152)
Q Consensus 23 lynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~K 76 (152)
|-.||..-.+++ ++++|++||+.+|...=+--..++.||++.+
T Consensus 616 WEiLGlla~RL~-----------h~~EA~~a~~~~l~~RFs~ka~~kLLeiY~~ 658 (754)
T 4gns_B 616 WELLGLIMLRTW-----------HWEDAVACLRTSIVARFDPVSCQQLLKIYLQ 658 (754)
T ss_dssp HHHHHHHHHHTT-----------CHHHHHHHHHHHHSSSCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhC-----------CHHHHHHHHHHHHHhccCHHHHHHHHHHHHh
Confidence 666798887754 9999999999999887666789999999975
No 257
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=50.42 E-value=15 Score=34.53 Aligned_cols=38 Identities=8% Similarity=-0.109 Sum_probs=30.6
Q ss_pred HHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHH
Q 031849 10 EEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAV 58 (152)
Q Consensus 10 e~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAl 58 (152)
.+.+..=|.++-.-|-+|.+|...| ++++|.+||+||-
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L~~g-----------e~~~A~~~F~kAA 867 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYLKSK-----------EAVKAVRCFKTTS 867 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHHHTT-----------CHHHHHHHHHTCC
T ss_pred HHHHhhcCCChHHHHHHHHHHHHcC-----------CHHHHHHHHHHHh
Confidence 3455666777777899999999754 9999999999875
No 258
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=50.26 E-value=29 Score=26.99 Aligned_cols=45 Identities=22% Similarity=0.274 Sum_probs=30.0
Q ss_pred hcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 14 MVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 14 ~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
-++|++.|.||+.-....+.|- |..+ ...++-.++|+||+..-|-
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~--p~~d---~~l~rlrd~YerAia~~Pp 51 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSV--PLSD---ALLNKLIGRYSQAIEALPP 51 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTC--SCCH---HHHHHHHHHHHHHHHHSCG
T ss_pred eeCCCCHHHHHHHHHHHHHcCC--Cchh---hHHHHHHHHHHHHHHcCCc
Confidence 4799999999998777665441 2111 2337888999999988775
No 259
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=49.84 E-value=8.9 Score=25.97 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCch
Q 031849 46 YFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPE 79 (152)
Q Consensus 46 ~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kape 79 (152)
..++|+++.++|++.|-. ..|.+++.++.++.+
T Consensus 7 ~~~~Ai~lv~~Ave~D~~-g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKE-GKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence 355777777777776542 234444444444333
No 260
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=46.40 E-value=9.9 Score=26.90 Aligned_cols=37 Identities=22% Similarity=0.341 Sum_probs=28.6
Q ss_pred HHHhHHHHHHHHHHHHHcCCCc---------HHHHHHHHHHHcCch
Q 031849 43 AKEYFNKATLYFQQAVDEEPSN---------ELYQKSLEVAAKAPE 79 (152)
Q Consensus 43 A~~~~ekA~~~FqkAleldP~N---------e~Y~ksLe~~~Kape 79 (152)
.++.+++|.+|..+||.+|-.| ++|++.++-..+...
T Consensus 9 ik~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~ 54 (89)
T 3eab_A 9 VRVFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIA 54 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcC
Confidence 4689999999999999988763 468888766655543
No 261
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=45.44 E-value=17 Score=34.56 Aligned_cols=35 Identities=9% Similarity=-0.091 Sum_probs=28.7
Q ss_pred HHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHH
Q 031849 12 ALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 12 AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkA 57 (152)
.+..-|.++-.-|-+|.+|... +++++|.+||+||
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~~-----------ge~~~A~~~F~ka 868 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLKS-----------KEAVKAVRCFKTT 868 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHT-----------TCHHHHHHHHHTC
T ss_pred HhhhccCCcHHHHHHHHHHHhc-----------CCHHHHHHHHHHH
Confidence 3455677777789999999865 4999999999998
No 262
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=45.34 E-value=18 Score=26.11 Aligned_cols=17 Identities=18% Similarity=0.214 Sum_probs=14.7
Q ss_pred HHHhHHHHHHHHHHHHH
Q 031849 43 AKEYFNKATLYFQQAVD 59 (152)
Q Consensus 43 A~~~~ekA~~~FqkAle 59 (152)
..+.||+||+|.++|..
T Consensus 27 ~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 27 AAGKYEEAISCHRKATT 43 (97)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHH
Confidence 34699999999999985
No 263
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=45.16 E-value=22 Score=24.29 Aligned_cols=25 Identities=16% Similarity=0.135 Sum_probs=21.5
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 41 DEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 41 ~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
.+..+-.|-|++|.+.|++++|++.
T Consensus 29 ~D~~ESLeVAiqCI~~aF~v~~~d~ 53 (74)
T 2lxb_A 29 EDGADSLNVAMDCISEAFGFEREAV 53 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhh
Confidence 4566778999999999999999884
No 264
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=44.44 E-value=12 Score=25.73 Aligned_cols=11 Identities=18% Similarity=0.455 Sum_probs=9.2
Q ss_pred ccCCCCchhhh
Q 031849 112 KKKSSDLKYDI 122 (152)
Q Consensus 112 ~k~~sd~~ydv 122 (152)
.++.++|.||.
T Consensus 6 ~~~~dpF~YDY 16 (74)
T 2zxe_G 6 PDNDERFTYDY 16 (74)
T ss_dssp TTCGGGGCCCH
T ss_pred CCCCCCcccch
Confidence 37899999994
No 265
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=44.42 E-value=16 Score=32.97 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhcCCCC-------hHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH
Q 031849 2 ILDAISKLEEALMVSPNR-------HDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~-------~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne 65 (152)
|+.|.....++. .|.+ ..-+|.+|..+..+ .+|.+|.+||..|+..-|.+.
T Consensus 247 y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q-----------~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 247 VDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQ-----------LDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp STTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHh-----------ccHHHHHHHHHHHHHhCCcch
Confidence 456666666664 3432 23367789999854 599999999999999988653
No 266
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=48.03 E-value=5.4 Score=22.32 Aligned_cols=15 Identities=33% Similarity=0.408 Sum_probs=11.6
Q ss_pred hhHHHHHHHHHHHHH
Q 031849 123 FGWVILAVGIVAWVG 137 (152)
Q Consensus 123 ~gw~il~~~iv~w~~ 137 (152)
-||+|++|.+-+-+|
T Consensus 2 Ng~l~iavvlGa~~G 16 (26)
T 2ls4_A 2 NGYLCIAVAAGAGTG 16 (26)
Confidence 389999988776665
No 267
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=41.36 E-value=59 Score=26.96 Aligned_cols=23 Identities=17% Similarity=0.034 Sum_probs=20.8
Q ss_pred HHHhHHHHHHHHHHHHHcCCCcH
Q 031849 43 AKEYFNKATLYFQQAVDEEPSNE 65 (152)
Q Consensus 43 A~~~~ekA~~~FqkAleldP~Ne 65 (152)
+.+++++|+...++++..+|-+|
T Consensus 183 ~~g~~~~a~~~l~~~~~~~P~~E 205 (388)
T 2ff4_A 183 ACGRASAVIAELEALTFEHPYRE 205 (388)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HCCCHHHHHHHHHHHHHhCCCCH
Confidence 44689999999999999999987
No 268
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=40.13 E-value=33 Score=23.13 Aligned_cols=29 Identities=14% Similarity=0.103 Sum_probs=24.0
Q ss_pred HhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCc
Q 031849 25 CLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSN 64 (152)
Q Consensus 25 nLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~N 64 (152)
.+|..+... +++++|..+|=+||..-|.-
T Consensus 22 ~~GE~L~~~-----------g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 22 QLGEELLAQ-----------GDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHT-----------TCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHC-----------CCHHHHHHHHHHHHHHcCCH
Confidence 577777754 47999999999999999875
No 269
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=38.25 E-value=1.3e+02 Score=25.65 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHH--------HhcCCCChHHHHHhHHHHHhcccCCCchHHHH------HhHHHHHHHHHHHHHcCCCcHH
Q 031849 1 MILDAISKLEEA--------LMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAK------EYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 1 mieeAIs~le~A--------L~idP~~~dAlynLGnAy~~~g~l~~d~~~A~------~~~ekA~~~FqkAleldP~Ne~ 66 (152)
+++.|+.+|.++ |....++.+-+-.++......| +...|. +++++|+++|++ -..
T Consensus 696 ~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~----~~~~A~~~~~~~g~~~~a~~~~~~-------~~~ 764 (814)
T 3mkq_A 696 NFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTG----KFNLAFNAYWIAGDIQGAKDLLIK-------SQR 764 (814)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHTCHHHHHHHHHH-------TTC
T ss_pred CHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcC----chHHHHHHHHHcCCHHHHHHHHHH-------cCC
Confidence 367788888775 2222444455555554444332 122222 456666666554 233
Q ss_pred HHHHHHHHHc
Q 031849 67 YQKSLEVAAK 76 (152)
Q Consensus 67 Y~ksLe~~~K 76 (152)
+.+|++++.+
T Consensus 765 ~~~A~~lA~~ 774 (814)
T 3mkq_A 765 FSEAAFLGST 774 (814)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 4555555544
No 270
>4asv_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; chaperone, membrane, tail-anchored, post-translational targe; NMR {Saccharomyces cerevisiae} PDB: 4asw_A
Probab=38.20 E-value=24 Score=25.15 Aligned_cols=26 Identities=15% Similarity=0.104 Sum_probs=22.1
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCcHH
Q 031849 41 DEAKEYFNKATLYFQQAVDEEPSNEL 66 (152)
Q Consensus 41 ~~A~~~~ekA~~~FqkAleldP~Ne~ 66 (152)
.+.++-.|-|++|.+.|++++|++..
T Consensus 41 ~D~~ESLEVAIqCI~~AF~Vd~~D~~ 66 (92)
T 4asv_A 41 EDGADSLNVAMDCISEAFGFEREAVS 66 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 55667889999999999999998854
No 271
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=38.15 E-value=20 Score=30.22 Aligned_cols=40 Identities=18% Similarity=0.124 Sum_probs=23.4
Q ss_pred hHHHHHhHHHHHhcccCCCc-----hHHHHHhHHHHHHHHHHHHH
Q 031849 20 HDTLWCLGNAHTSHAFLTPD-----QDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 20 ~dAlynLGnAy~~~g~l~~d-----~~~A~~~~ekA~~~FqkAle 59 (152)
.-.+||+|.+|+..|-..+. ...|-..|.+|.-+|+-..+
T Consensus 117 a~VLfNiaal~s~~a~~~~r~~~~glK~A~~~fq~AAG~f~~l~~ 161 (363)
T 3rau_A 117 ACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLRE 161 (363)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999887643221 12233455555555554444
No 272
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=37.10 E-value=7.1 Score=32.31 Aligned_cols=47 Identities=13% Similarity=0.159 Sum_probs=0.0
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCcH----HHHHHHHHHHcCchhhHHHHhh
Q 031849 41 DEAKEYFNKATLYFQQAVDEEPSNE----LYQKSLEVAAKAPELHMEIHKH 87 (152)
Q Consensus 41 ~~A~~~~ekA~~~FqkAleldP~Ne----~Y~ksLe~~~Kapelh~e~~~~ 87 (152)
.+|...|.+|+++|.+|+..+|+.. +-++.-+-.+.|=+|-..|.++
T Consensus 40 ~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RAE~LK~~L~k~ 90 (257)
T 2ymb_A 40 PQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENIKKYLDQE 90 (257)
T ss_dssp ---------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455677788888888888887654 2333345555665555544443
No 273
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=37.02 E-value=27 Score=29.50 Aligned_cols=38 Identities=13% Similarity=-0.030 Sum_probs=22.2
Q ss_pred hHHHHHhHHHHHhcccCCCch-----HHHHHhHHHHHHHHHHH
Q 031849 20 HDTLWCLGNAHTSHAFLTPDQ-----DEAKEYFNKATLYFQQA 57 (152)
Q Consensus 20 ~dAlynLGnAy~~~g~l~~d~-----~~A~~~~ekA~~~FqkA 57 (152)
.-++||+|.+|+.+|...+.. ..|-..|.+|.-+|+-.
T Consensus 142 a~VLfNlgal~s~~A~~~~r~~~eglK~A~~~fq~AAG~f~~l 184 (380)
T 3c3r_A 142 SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHI 184 (380)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH
Confidence 457899999998877543211 22334555555555443
No 274
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=36.69 E-value=1.7e+02 Score=23.60 Aligned_cols=77 Identities=18% Similarity=0.179 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----------------H
Q 031849 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE----------------L 66 (152)
Q Consensus 3 eeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne----------------~ 66 (152)
..|+..|..||..+|-++.-....=..|.. .+.+ +--=.+..|+-....||+-. .
T Consensus 102 r~Ale~y~~ALq~~pp~~~~il~aLk~yir--------ae~K-DR~Hti~hy~Hv~~~dpe~A~~~k~~v~~hL~~id~r 172 (211)
T 3umh_A 102 RLALENYITALQAVPPRPRHVFNMLKKYVR--------AEQK-DRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER 172 (211)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHH--------HHHH-HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHH--------HHHH-HHHhHHHHHHHHHcCCHHHHHhcchHHHHHHHHHHHH
Confidence 468899999998877775444433333432 1122 33447888888888888652 3
Q ss_pred HHHHHHHHHcCchhhHHHHhhh
Q 031849 67 YQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 67 Y~ksLe~~~Kapelh~e~~~~~ 88 (152)
-..+|.+..+-|+|..+|+..+
T Consensus 173 ~NqsL~lL~~~P~l~~~i~~~~ 194 (211)
T 3umh_A 173 MNQSLSLLYNVPAVAEEIQDEV 194 (211)
T ss_dssp HHHHHHGGGGSHHHHHHHHHHH
T ss_pred HhHhHHHHHhCcHHHHHHHHHH
Confidence 4567899999999999999877
No 275
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=36.53 E-value=7.4 Score=33.13 Aligned_cols=18 Identities=22% Similarity=0.200 Sum_probs=0.0
Q ss_pred HhHHHHHHHHHHHHHcCC
Q 031849 45 EYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 45 ~~~ekA~~~FqkAleldP 62 (152)
+..++|+++.++|++.|-
T Consensus 6 ~~~~~A~~~~~~Av~~D~ 23 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDK 23 (444)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 356677777777777764
No 276
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=36.28 E-value=17 Score=30.70 Aligned_cols=40 Identities=20% Similarity=0.108 Sum_probs=24.9
Q ss_pred ChHHHHHhHHHHHhcccCCC--chHHHHHhHHHHHHHHHHHH
Q 031849 19 RHDTLWCLGNAHTSHAFLTP--DQDEAKEYFNKATLYFQQAV 58 (152)
Q Consensus 19 ~~dAlynLGnAy~~~g~l~~--d~~~A~~~~ekA~~~FqkAl 58 (152)
..-++||+|.+|+.+|...+ +...|-..|.+|.-+|+-.-
T Consensus 122 ~a~vLfNlaal~s~~A~~~~r~~lk~A~~~fq~AAG~f~~l~ 163 (392)
T 1zb1_A 122 KSCTLFNIAVIFTQIARENINEDYKNSIANLTKAFSCFEYLS 163 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 34679999999988764221 33444456666666666544
No 277
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=35.50 E-value=22 Score=24.28 Aligned_cols=16 Identities=25% Similarity=0.661 Sum_probs=13.7
Q ss_pred HhHHHHHHHHHHHHHc
Q 031849 45 EYFNKATLYFQQAVDE 60 (152)
Q Consensus 45 ~~~ekA~~~FqkAlel 60 (152)
++||.|+.||+.+++.
T Consensus 26 GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 26 GNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHH
Confidence 5999999999998863
No 278
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=35.50 E-value=68 Score=27.10 Aligned_cols=48 Identities=23% Similarity=0.104 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhcCC--------CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVSP--------NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~le~AL~idP--------~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
++.-++.|++|+..=| ++.-|+-.|+.+|... ++|++|+++.+++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~-----------~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYH-----------DDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhc-----------ccHHHHHHHHHHHHhC
Confidence 4566778888886544 3445677778887753 4899999999999864
No 279
>1v54_D Cytochrome C oxidase subunit IV isoform 1; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.1.1 PDB: 1oco_D* 1occ_D* 1ocz_D* 1ocr_D* 1v55_D* 2dyr_D* 2dys_D* 2eij_D* 2eik_D* 2eil_D* 2eim_D* 2ein_D* 2occ_D* 2ybb_O* 2zxw_D* 3abk_D* 3abl_D* 3abm_D* 3ag1_D* 3ag2_D* ...
Probab=35.01 E-value=27 Score=26.66 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=17.0
Q ss_pred hhhhHHHHHHHHHHHHHh-hhcCC
Q 031849 121 DIFGWVILAVGIVAWVGF-AKSHM 143 (152)
Q Consensus 121 dv~gw~il~~~iv~w~~~-a~~~~ 143 (152)
=|+|.|++.+||-+|+-+ -|..+
T Consensus 80 ~v~g~v~~~i~~s~~~f~~~r~~v 103 (147)
T 1v54_D 80 TVVGAAMFFIGFTALLLIWEKHYV 103 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 389999999998888643 45554
No 280
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=34.36 E-value=40 Score=29.55 Aligned_cols=32 Identities=16% Similarity=0.102 Sum_probs=27.0
Q ss_pred HHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc-CCCc
Q 031849 22 TLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-EPSN 64 (152)
Q Consensus 22 AlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel-dP~N 64 (152)
-+|.+|..+.. +++|.+|.++|+.|++. -|.+
T Consensus 222 Y~YYlGr~~~~-----------~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 222 YRYLLGRYYLL-----------NSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHH-----------TTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeHHHHHHHHH-----------HccHHHHHHHHHHHHHhcCCcc
Confidence 37899999975 35999999999999999 7754
No 281
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=33.22 E-value=40 Score=28.39 Aligned_cols=39 Identities=15% Similarity=-0.001 Sum_probs=23.0
Q ss_pred hHHHHHhHHHHHhcccC-------CC-chHHHHHhHHHHHHHHHHHH
Q 031849 20 HDTLWCLGNAHTSHAFL-------TP-DQDEAKEYFNKATLYFQQAV 58 (152)
Q Consensus 20 ~dAlynLGnAy~~~g~l-------~~-d~~~A~~~~ekA~~~FqkAl 58 (152)
.-++||+|.+|+.+|-. +. +...|-..|.+|..+|+-..
T Consensus 114 a~VLfNiaal~sq~A~~~~~~~r~~~e~lK~A~~~fq~AAG~f~~l~ 160 (376)
T 3r9m_A 114 ISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLK 160 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999877632 11 12334445555555555444
No 282
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=32.98 E-value=1e+02 Score=24.06 Aligned_cols=36 Identities=17% Similarity=0.046 Sum_probs=26.4
Q ss_pred hcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 14 MVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 14 ~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
.-++-+++-++-|++||.+.| +-.+|.+...+|-+-
T Consensus 119 ~n~~~~~~~l~kia~Ay~Klg-----------~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 119 KNNEVSASILVAIANALRRVG-----------DERDATTLLIEACKK 154 (172)
T ss_dssp --CCSCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHT
T ss_pred ccCCCChHHHHHHHHHHHHhc-----------chhhHHHHHHHHHHh
Confidence 345557999999999999876 666777777776653
No 283
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=32.31 E-value=2e+02 Score=23.24 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----------------H
Q 031849 3 LDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE----------------L 66 (152)
Q Consensus 3 eeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne----------------~ 66 (152)
..|...|..||..+|-++.-..+.=..|.. .+.+ +--=.+..|+-....||+-. .
T Consensus 109 r~Ale~y~~ALq~~pP~~~~vl~aLk~yir--------ae~K-DR~Htl~hf~Hv~~~dpe~A~~~k~~vl~hL~~Id~r 179 (219)
T 3pmr_A 109 RAALEGFLAALQADPPQAERVLLALRRYLR--------AEQK-EQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEER 179 (219)
T ss_dssp HHHHHHHHHHHTSSSCCHHHHHHHHHHHHH--------HHHH-HHHHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHH--------HHHH-HHHhHHHHHHHHHccCHHHHhhcchHHHHHHHHHHHH
Confidence 468999999998886665444443334442 1122 44447889999999998652 3
Q ss_pred HHHHHHHHHcCchhhHHHHhhh
Q 031849 67 YQKSLEVAAKAPELHMEIHKHG 88 (152)
Q Consensus 67 Y~ksLe~~~Kapelh~e~~~~~ 88 (152)
-..+|.+..+-|+|-.+|+..+
T Consensus 180 ~NqSL~lL~~~P~l~~~i~~~i 201 (219)
T 3pmr_A 180 VNQSLGLLDQNPHLAQELRPQI 201 (219)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHH
T ss_pred HhhhHHHHHcCchHHHHHhHHH
Confidence 5567899999999998888766
No 284
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=31.71 E-value=1.5e+02 Score=25.45 Aligned_cols=57 Identities=21% Similarity=0.229 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcc-----------c--CCCchHHHHHhHHHHHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHA-----------F--LTPDQDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g-----------~--l~~d~~~A~~~~ekA~~~FqkAle 59 (152)
|+.|++..+--|+..|++....+-++.++...- . -.|-..-|+...++|..||+ +|+
T Consensus 101 FDaALERielGLe~~p~s~~L~la~SKILlqrI~~~~~~~s~eE~~~~~p~~~ta~kmi~qa~~~l~-~La 170 (346)
T 3qtm_A 101 IDAAIERAQLGLDAPGNESRLFLALARAYLEKVRVLVWRHDNEESLANIPVTQLVNPYIEKAIQYLR-PLA 170 (346)
T ss_dssp HHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHhhhhhCCCChhHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHH-HHH
Confidence 688999999999999999988888888775430 0 11223445668888999988 454
No 285
>2y69_D Cytochrome C oxidase subunit 4 isoform 1; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=29.76 E-value=37 Score=26.54 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=17.0
Q ss_pred hhhhHHHHHHHHHHHHHh-hhcCC
Q 031849 121 DIFGWVILAVGIVAWVGF-AKSHM 143 (152)
Q Consensus 121 dv~gw~il~~~iv~w~~~-a~~~~ 143 (152)
-|+|.|++.+||-+|+-+ -|..+
T Consensus 102 ~V~ggv~~~i~~s~~~f~~~r~~v 125 (169)
T 2y69_D 102 TVVGAAMFFIGFTALLLIWEKHYV 125 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 389999999998888644 45554
No 286
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=29.68 E-value=71 Score=25.73 Aligned_cols=65 Identities=23% Similarity=0.216 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHH----HHHHHHHcC--CCcHHHHHH
Q 031849 2 ILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATL----YFQQAVDEE--PSNELYQKS 70 (152)
Q Consensus 2 ieeAIs~le~AL~-----idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~----~FqkAleld--P~Ne~Y~ks 70 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -+..++.++|+. .|+.|+..= -+.+.|+.+
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthP---irLgLaLN~SVF~----yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDs 218 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHP---IRLGLALNFSVFY----YEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDS 218 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCH---HHHHHHHHHHHHH----HHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCCc---HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHH
Confidence 4678888998884 677785 4577776321121 122345555554 455554432 234568777
Q ss_pred HHH
Q 031849 71 LEV 73 (152)
Q Consensus 71 Le~ 73 (152)
..+
T Consensus 219 tlI 221 (234)
T 2br9_A 219 TLI 221 (234)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 287
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=29.65 E-value=41 Score=22.95 Aligned_cols=20 Identities=15% Similarity=0.089 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhcCCCChH
Q 031849 2 ILDAISKLEEALMVSPNRHD 21 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~d 21 (152)
+|-||.+++.|+.++|++..
T Consensus 35 LeVAiqCI~~aF~v~~~d~~ 54 (74)
T 2lxb_A 35 LNVAMDCISEAFGFEREAVS 54 (74)
T ss_dssp HHHHHHHHHHHHTCCTTTHH
T ss_pred HHHHHHHHHHHhCCCchhhH
Confidence 57899999999999999854
No 288
>2b8i_A PAS factor; four helix bundle, lipid binding protein; 1.80A {Vibrio vulnificus}
Probab=28.97 E-value=44 Score=23.07 Aligned_cols=26 Identities=27% Similarity=0.484 Sum_probs=21.7
Q ss_pred HHHHHHHHHHcCchhhHHHHhhhhcc
Q 031849 66 LYQKSLEVAAKAPELHMEIHKHGLGQ 91 (152)
Q Consensus 66 ~Y~ksLe~~~Kapelh~e~~~~~~~q 91 (152)
.|.-...++.+.||-|.+|.+.+-.|
T Consensus 9 iydtL~~La~~~PeqhA~iRQ~LYeq 34 (77)
T 2b8i_A 9 IYETLVNLANQDPEQHATIRQNLYEQ 34 (77)
T ss_dssp HHHHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 57778899999999999999877444
No 289
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=28.85 E-value=19 Score=30.45 Aligned_cols=36 Identities=11% Similarity=0.045 Sum_probs=25.7
Q ss_pred CCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCC
Q 031849 17 PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPS 63 (152)
Q Consensus 17 P~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~ 63 (152)
..-.+++..||.-|.+.| ++++|.++|.++.+.-..
T Consensus 128 ~e~~~~~~~la~~~~~~G-----------d~~~A~~~~~~~~~~~~~ 163 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIG-----------DKDNAEKTLGKSLSKAIS 163 (429)
T ss_dssp CCCSSCCHHHHHHHHHHC-----------CCTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhcCC
Confidence 334567888888888754 778888888887775543
No 290
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=28.27 E-value=74 Score=26.16 Aligned_cols=65 Identities=22% Similarity=0.204 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHh----cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHH-----cCC-CcHHHHHHH
Q 031849 2 ILDAISKLEEALM----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVD-----EEP-SNELYQKSL 71 (152)
Q Consensus 2 ieeAIs~le~AL~----idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAle-----ldP-~Ne~Y~ksL 71 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -|..++.++|+..-++|++ +|- +.+.|+.+.
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthP---irLGLaLNfSVFy----YEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDst 244 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHP---IRLGLALNFSVFH----YEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDST 244 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHHHH----HHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc---HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHH
Confidence 4678889999985 566674 4577776322121 1233456666555554443 221 345677765
Q ss_pred HH
Q 031849 72 EV 73 (152)
Q Consensus 72 e~ 73 (152)
.+
T Consensus 245 lI 246 (260)
T 2npm_A 245 LI 246 (260)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 291
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=27.85 E-value=36 Score=31.03 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=13.9
Q ss_pred hHHHHHhHHHHHHHHHHHHH
Q 031849 40 QDEAKEYFNKATLYFQQAVD 59 (152)
Q Consensus 40 ~~~A~~~~ekA~~~FqkAle 59 (152)
.+.|.+.-++|++|||+|++
T Consensus 441 n~~a~~yA~kAi~~Y~~Ai~ 460 (526)
T 2wb7_A 441 NENAIEYAQGAIDEYKAAIN 460 (526)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 35566677777777777775
No 292
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=27.67 E-value=1.2e+02 Score=25.74 Aligned_cols=49 Identities=12% Similarity=0.019 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhcCCC--------ChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC
Q 031849 2 ILDAISKLEEALMVSPN--------RHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE 61 (152)
Q Consensus 2 ieeAIs~le~AL~idP~--------~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld 61 (152)
++.-++.|++|+..=|. +.-|+-.|+.+|... ++|++|+++.+++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~-----------~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNM-----------GEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhCC
Confidence 45667888888875443 445677778887653 48999999999999754
No 293
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=27.59 E-value=1.1e+02 Score=25.98 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhcCC--------CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVSP--------NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~le~AL~idP--------~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
++.-++.|++|+..=| ++.-|+-.|+.+|... ++|++|+++.+++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~-----------~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYK-----------GEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHH-----------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHhc
Confidence 4556777888876434 3445677777777643 5899999999999864
No 294
>1wwp_A Hypothetical protein TTHA0636; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 2.11A {Thermus thermophilus HB8}
Probab=26.60 E-value=79 Score=22.09 Aligned_cols=47 Identities=11% Similarity=-0.031 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHcCCCcHHHHHHH-HHHHcCchhhHHHHhhhh-cccc
Q 031849 47 FNKATLYFQQAVDEEPSNELYQKSL-EVAAKAPELHMEIHKHGL-GQQT 93 (152)
Q Consensus 47 ~ekA~~~FqkAleldP~Ne~Y~ksL-e~~~Kapelh~e~~~~~~-~q~~ 93 (152)
+++|+.-++++++.+|.++.++.++ ..++-+.|+=-.+.++.+ ...+
T Consensus 2 ~~~al~~L~e~~~~~~~~~~~~dg~iq~fe~t~Elawk~~k~~l~~~~g 50 (119)
T 1wwp_A 2 AEKALATLKELAFLEDPSPVERDAAIQRFEYTFEAFWKALQAYLREKEG 50 (119)
T ss_dssp HHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 6788999999999988888888776 566888899899999888 7654
No 295
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=26.28 E-value=70 Score=19.19 Aligned_cols=16 Identities=25% Similarity=0.461 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHcC
Q 031849 46 YFNKATLYFQQAVDEE 61 (152)
Q Consensus 46 ~~ekA~~~FqkAleld 61 (152)
-|+||...|+.||+.+
T Consensus 17 ayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 17 AYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5999999999999865
No 296
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=26.20 E-value=2.2e+02 Score=25.68 Aligned_cols=71 Identities=13% Similarity=0.172 Sum_probs=45.9
Q ss_pred HHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc------CC-CcHHHHHHHH
Q 031849 5 AISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE------EP-SNELYQKSLE 72 (152)
Q Consensus 5 AIs~le~AL~-----idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel------dP-~Ne~Y~ksLe 72 (152)
++..|++|+. .+-.+---|-+||--++.++ +|.+|+.++-.|-+. .- |-|.|++.+|
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~-----------~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~e 351 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNR-----------NVREALQAWADTATVIQDYNYCREDEEIYKEFFE 351 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhh-----------hHHHHHHHhhhhhhhhhhcccccchHHHHHHHHH
Confidence 5667777775 34455666788888887654 777888887776442 22 3378987777
Q ss_pred HHHcCchhhHHHHhhhh
Q 031849 73 VAAKAPELHMEIHKHGL 89 (152)
Q Consensus 73 ~~~Kapelh~e~~~~~~ 89 (152)
++. ||=+.+-|...
T Consensus 352 Ian---elip~~lk~~~ 365 (489)
T 4gq4_A 352 VAN---DVIPNLLKEAA 365 (489)
T ss_dssp HHH---THHHHHHHHHH
T ss_pred HHH---HhhhHHHHHhh
Confidence 764 45566655443
No 297
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=25.96 E-value=88 Score=25.66 Aligned_cols=26 Identities=19% Similarity=0.194 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHh-----cCCCChHHHHHhHHHH
Q 031849 2 ILDAISKLEEALM-----VSPNRHDTLWCLGNAH 30 (152)
Q Consensus 2 ieeAIs~le~AL~-----idP~~~dAlynLGnAy 30 (152)
.+.|...|++|++ +.|.|+ ..||.|+
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthP---irLGLaL 181 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHP---IRLGLAL 181 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCc---HHHHHHH
Confidence 4678888998884 677785 4577776
No 298
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1
Probab=25.62 E-value=25 Score=25.79 Aligned_cols=36 Identities=14% Similarity=0.142 Sum_probs=23.9
Q ss_pred HHHHHcCCCcHHHHHHHHHHHcCchhhHHHHhhhhccc
Q 031849 55 QQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQ 92 (152)
Q Consensus 55 qkAleldP~Ne~Y~ksLe~~~Kapelh~e~~~~~~~q~ 92 (152)
++.|++||+|++.++.++. +..+.=..+-.++..|.
T Consensus 67 k~~LEINp~HplIk~L~~~--~~~~~~k~l~~lLyd~A 102 (126)
T 1sf8_A 67 KYIFELNPDHVLVKRAADT--EDEAKFSEWVELLLDQA 102 (126)
T ss_dssp CCEEEECTTSHHHHHHHHC--CSHHHHHHHHHHHHHHH
T ss_pred CeeeeECCCCHHHHHHHHh--cChHHHHHHHHHHHHHH
Confidence 5789999999999998752 33333344555554443
No 299
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=25.03 E-value=51 Score=23.35 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=27.0
Q ss_pred HhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH----HHHHHH
Q 031849 25 CLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE----LYQKSL 71 (152)
Q Consensus 25 nLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne----~Y~ksL 71 (152)
.+|..+... ++++.|+.+|=+||..-|.-. .|++.|
T Consensus 25 ~lGE~L~~~-----------g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~Tl 64 (95)
T 1om2_A 25 QLGEELLAQ-----------GDYEKGVDHLTNAIAVCGQPQQLLQVLQQTL 64 (95)
T ss_dssp HHHHHHHHH-----------TCHHHHHHHHHHHHHHHSCHHHHHHHHHHHS
T ss_pred HHHHHHHHC-----------CCHHHHHHHHHHHHHHcCCHHHHHHHHHhhC
Confidence 467777654 479999999999999988642 355554
No 300
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=24.92 E-value=95 Score=25.33 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHH----HHHHHHH-cCC-CcHHHHHH
Q 031849 2 ILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATL----YFQQAVD-EEP-SNELYQKS 70 (152)
Q Consensus 2 ieeAIs~le~AL~-----idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~----~FqkAle-ldP-~Ne~Y~ks 70 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -+..++.++|+. .|+.|+. +|- +.+.|+.+
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthP---irLGLaLNfSVFy----YEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDs 219 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHP---IRLGLALNYSVFY----YEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDS 219 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCH---HHHHHHHHHHHHH----HHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCc---HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHH
Confidence 3677888888874 778885 5577776321121 122345555554 4555554 222 33467766
Q ss_pred HHH
Q 031849 71 LEV 73 (152)
Q Consensus 71 Le~ 73 (152)
.-+
T Consensus 220 tlI 222 (248)
T 3uzd_A 220 TLI 222 (248)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 301
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=24.68 E-value=56 Score=26.85 Aligned_cols=44 Identities=18% Similarity=0.338 Sum_probs=34.6
Q ss_pred HHhHHHHHHHHHHHHHcCCCcH-HHHHHHHHHHcCchhhHHHHhh
Q 031849 44 KEYFNKATLYFQQAVDEEPSNE-LYQKSLEVAAKAPELHMEIHKH 87 (152)
Q Consensus 44 ~~~~ekA~~~FqkAleldP~Ne-~Y~ksLe~~~Kapelh~e~~~~ 87 (152)
++.|++|.+.|+|-+.-+|.|. +=++.+.+..+=--.|+-||+.
T Consensus 127 k~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~~H~~lqnF 171 (235)
T 3bu8_A 127 NKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNLAHPVIQNF 171 (235)
T ss_dssp TTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCTTSHHHHTC
T ss_pred hcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCcccHHHHhc
Confidence 4689999999999999988886 6666667775555578888873
No 302
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=24.51 E-value=1.6e+02 Score=22.56 Aligned_cols=13 Identities=38% Similarity=0.347 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHh
Q 031849 2 ILDAISKLEEALM 14 (152)
Q Consensus 2 ieeAIs~le~AL~ 14 (152)
|-.|...|++||+
T Consensus 79 yrrA~~~y~qALq 91 (167)
T 3ffl_A 79 YRNAVSKYTMALQ 91 (167)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5678899999874
No 303
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=24.44 E-value=2.1e+02 Score=26.02 Aligned_cols=70 Identities=13% Similarity=0.199 Sum_probs=46.4
Q ss_pred HHHHHHHHHhc-----CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc-------CCCcHHHHHHHH
Q 031849 5 AISKLEEALMV-----SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE-------EPSNELYQKSLE 72 (152)
Q Consensus 5 AIs~le~AL~i-----dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel-------dP~Ne~Y~ksLe 72 (152)
++..|.+|+.. +-.|---|-+||.-|++++ ++.+|+.++-.|-+. --|.|.|++-+|
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~-----------~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~e 366 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNR-----------NVREALQAWADTATVIQDYNYCREDEEIYKEFFE 366 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcc-----------hHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 46667777743 4455667888988777653 777777777666543 123478998888
Q ss_pred HHHcCchhhHHHHhhh
Q 031849 73 VAAKAPELHMEIHKHG 88 (152)
Q Consensus 73 ~~~Kapelh~e~~~~~ 88 (152)
++. ||=+++.|.-
T Consensus 367 IAn---eliP~~~k~~ 379 (550)
T 3u84_A 367 VAN---DVIPNLLKEA 379 (550)
T ss_dssp HHH---THHHHHHHHH
T ss_pred HHH---HhhhHHHHHh
Confidence 765 5667777754
No 304
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=23.93 E-value=16 Score=30.12 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHcCCCcHHHHHHHHHHHcCchhh
Q 031849 46 YFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELH 81 (152)
Q Consensus 46 ~~ekA~~~FqkAleldP~Ne~Y~ksLe~~~Kapelh 81 (152)
....|+...++|++.|- +..|++|++++..|.++=
T Consensus 19 ~~~~Ai~lv~~AVe~D~-~g~y~eAl~lY~eaIe~L 53 (257)
T 2ymb_A 19 QSTAAATVLKRAVELDS-ESRYPQALVCYQEGIDLL 53 (257)
T ss_dssp ------------------------------------
T ss_pred hHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 55667777777777665 344555555555555443
No 305
>1s6c_B Potassium voltage-gated channel subfamily D membe; EF-hand, transport protein; 2.00A {Rattus norvegicus}
Probab=23.76 E-value=14 Score=21.41 Aligned_cols=23 Identities=26% Similarity=0.702 Sum_probs=6.7
Q ss_pred hhhHHHHHHH-HHHHHHhhhcCCC
Q 031849 122 IFGWVILAVG-IVAWVGFAKSHMP 144 (152)
Q Consensus 122 v~gw~il~~~-iv~w~~~a~~~~p 144 (152)
|.-|.-|+=. .++|+=+|...+|
T Consensus 5 v~~w~~far~a~igw~P~a~~~~p 28 (30)
T 1s6c_B 5 VAAWLPFARAAAIGWMPVASGPMP 28 (30)
T ss_dssp HHTTHHHHHHHHHTTCC-------
T ss_pred hhhhcccchhhcccccccccCCCC
Confidence 3334444332 4445544444443
No 306
>1jog_A Hypothetical protein HI0074; structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: a.24.16.2
Probab=23.60 E-value=50 Score=24.33 Aligned_cols=49 Identities=16% Similarity=0.143 Sum_probs=38.9
Q ss_pred HhHHHHHHHHHHHHHc-----------CCCcHHHHHHH-HHHHcCchhhHHHHhhhhcccc
Q 031849 45 EYFNKATLYFQQAVDE-----------EPSNELYQKSL-EVAAKAPELHMEIHKHGLGQQT 93 (152)
Q Consensus 45 ~~~ekA~~~FqkAlel-----------dP~Ne~Y~ksL-e~~~Kapelh~e~~~~~~~q~~ 93 (152)
++|++|+.-++++++. +|.|+.++.++ ..++-+.|+=-.+.++.+...+
T Consensus 9 ~~~~kal~~L~e~~~~~~~~~~~~~~~~~~~~~~~dg~iq~fe~t~Elawk~~k~~L~~~g 69 (146)
T 1jog_A 9 NVLDAAFYSLEQTVVQISDRNWFDMQPSIVQDTLIAGAIQKFEFVYELSLKMMKRQLQQDA 69 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5888999999999887 44667777766 5668889998999998887664
No 307
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=22.80 E-value=1.9e+02 Score=24.67 Aligned_cols=48 Identities=27% Similarity=0.320 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhcCC-----------CChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVSP-----------NRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~le~AL~idP-----------~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
++.-++.|++|+..=| ++.-|+-.|+.+|... ++|++|+++.+++++.
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~-----------~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYA-----------RQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHhc
Confidence 4556777888876443 3345677778888753 4899999999999975
No 308
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=22.75 E-value=1.2e+02 Score=25.88 Aligned_cols=48 Identities=15% Similarity=-0.015 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhcC-------------CCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHc
Q 031849 2 ILDAISKLEEALMVS-------------PNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDE 60 (152)
Q Consensus 2 ieeAIs~le~AL~id-------------P~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAlel 60 (152)
++.-++.|++|+.+= +++.-|+-.|+.+|... ++|++|+++.+++++.
T Consensus 160 y~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~-----------~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 160 YQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLT-----------GQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHhc
Confidence 344566666666422 33445677777777653 4899999999999864
No 309
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=22.33 E-value=3e+02 Score=24.58 Aligned_cols=71 Identities=23% Similarity=0.205 Sum_probs=46.8
Q ss_pred HHHHHHHHHhc-----CCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcC-------CCcHHHHHHHH
Q 031849 5 AISKLEEALMV-----SPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEE-------PSNELYQKSLE 72 (152)
Q Consensus 5 AIs~le~AL~i-----dP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleld-------P~Ne~Y~ksLe 72 (152)
++..|.+|+.. +-.|---|-+||.-|++++ ++.+|+.++-.|-+.= -|.|.|++-+|
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~-----------~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~e 344 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKK-----------KYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHE 344 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcc-----------hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Confidence 56677777753 4455667888988777653 7777777777765431 12378888777
Q ss_pred HHHcCchhhHHHHhhhh
Q 031849 73 VAAKAPELHMEIHKHGL 89 (152)
Q Consensus 73 ~~~Kapelh~e~~~~~~ 89 (152)
++. ||=+++.|--+
T Consensus 345 IAn---eliP~~~k~a~ 358 (472)
T 3re2_A 345 IAN---DLIPNILKDAV 358 (472)
T ss_dssp HHH---THHHHHHHHHH
T ss_pred HHH---HHhhHHHHhhh
Confidence 764 66677777444
No 310
>1skh_A Major prion protein 2; coil-helix-coil, unknown function; NMR {Bos taurus}
Probab=22.24 E-value=47 Score=19.17 Aligned_cols=20 Identities=35% Similarity=0.836 Sum_probs=14.1
Q ss_pred hhhhHHHHHHHHHHH--HHhhhc
Q 031849 121 DIFGWVILAVGIVAW--VGFAKS 141 (152)
Q Consensus 121 dv~gw~il~~~iv~w--~~~a~~ 141 (152)
-+..|+ |+.-++.| ||+.|.
T Consensus 5 ~~~cwi-lvLfva~wsdvglcKK 26 (30)
T 1skh_A 5 KIGSWI-LVLFVAMWSDVGLCKK 26 (30)
T ss_dssp TTTTHH-HHHHHHHHHHHTTSSS
T ss_pred cccHHH-HHHHHHHHhHHHHhhc
Confidence 345564 55667889 899886
No 311
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=21.35 E-value=1.2e+02 Score=24.95 Aligned_cols=65 Identities=23% Similarity=0.256 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHh-----cCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHH----HHHHHHHc-CC-CcHHHHHH
Q 031849 2 ILDAISKLEEALM-----VSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATL----YFQQAVDE-EP-SNELYQKS 70 (152)
Q Consensus 2 ieeAIs~le~AL~-----idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~----~FqkAlel-dP-~Ne~Y~ks 70 (152)
.+.|...|++|++ +.|.|+ ..||.|+-.--|+ -|..++.++|+. .|+.|+.. |- +.+.|+.+
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThP---irLGLaLNfSVFy----YEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDs 244 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHP---IRLGLALNFSVFY----YEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDS 244 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCH---HHHHHHHHHHHHH----HHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCc---HHHHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHH
Confidence 3677888888874 678885 5577776321121 122345555554 55555532 22 33467766
Q ss_pred HHH
Q 031849 71 LEV 73 (152)
Q Consensus 71 Le~ 73 (152)
.-+
T Consensus 245 tlI 247 (261)
T 3ubw_A 245 TLI 247 (261)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 312
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=21.20 E-value=90 Score=22.27 Aligned_cols=12 Identities=25% Similarity=0.393 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHH
Q 031849 2 ILDAISKLEEAL 13 (152)
Q Consensus 2 ieeAIs~le~AL 13 (152)
||+|+..|++.+
T Consensus 32 FEeal~eLEeIV 43 (100)
T 1vp7_A 32 FETALAELESLV 43 (100)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566666666666
No 313
>3dfb_A Metal-binding protein SMBP; four helical bundle, copper, periplasm; 1.90A {Nitrosomonas europaea} PDB: 3u8v_A
Probab=21.05 E-value=1.1e+02 Score=21.61 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHH
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkA 57 (152)
+++||..|++||+ .-++|.+ +.|...-++|+..|+++
T Consensus 52 ~~~aIkhLeeAI~--------hg~~gha-----------d~Atkha~eAl~Hlk~~ 88 (93)
T 3dfb_A 52 VGHGIKHLEDAIK--------HGEEGHV-----------GVATKHAQEAIEHLRAS 88 (93)
T ss_dssp HHHHHHHHHHHHH--------HHHTTCH-----------HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH--------hcccccH-----------HHHHHHHHHHHHHHHHh
Confidence 4677777777775 3344443 33566778888888774
No 314
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.65 E-value=1e+02 Score=19.70 Aligned_cols=24 Identities=38% Similarity=0.765 Sum_probs=14.4
Q ss_pred hhHHHHHHH-HHHH-HHhhhcCCCCC
Q 031849 123 FGWVILAVG-IVAW-VGFAKSHMPPP 146 (152)
Q Consensus 123 ~gw~il~~~-iv~w-~~~a~~~~p~~ 146 (152)
+|=++|++. .+-| +||=|.+-||.
T Consensus 21 ~GLllL~li~~~LwK~GFFkR~~~~~ 46 (54)
T 2knc_A 21 GGLLLLTILVLAMWKVGFFKRNRPPL 46 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCCSC
T ss_pred HHHHHHHHHHHHHHHcCcccCCCCCc
Confidence 344444443 3567 89988777654
No 315
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=20.46 E-value=2.8e+02 Score=20.82 Aligned_cols=80 Identities=5% Similarity=-0.072 Sum_probs=54.1
Q ss_pred HHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCCCcH---------------HHHHH
Q 031849 6 ISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNE---------------LYQKS 70 (152)
Q Consensus 6 Is~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP~Ne---------------~Y~ks 70 (152)
...|++=+ .+.-..++-|+++.++.+.. ...+..+++..++..+..+|++. .|.++
T Consensus 26 r~qY~~E~-~~~vs~~t~F~YAw~Lv~S~--------~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~A 96 (144)
T 1y8m_A 26 RQQVVSEG-GPTATIQSRFNYAWGLIKST--------DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMA 96 (144)
T ss_dssp HHHHHHTT-STTSCHHHHHHHHHHHHHSS--------SHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHhc-cCCCcHHHHHHHHHHHHcCC--------CHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHH
Confidence 34444432 24668899999999987543 25688899999999999999764 26666
Q ss_pred HHHHH----------cCchhhHHHHhhhhccccc
Q 031849 71 LEVAA----------KAPELHMEIHKHGLGQQTM 94 (152)
Q Consensus 71 Le~~~----------Kapelh~e~~~~~~~q~~~ 94 (152)
++..+ +|-+|+.-|.+.+..-|-+
T Consensus 97 r~y~d~lL~~eP~n~QA~~Lk~~Ie~~i~kdGli 130 (144)
T 1y8m_A 97 KRYVDTLFEHERNNKQVGALKSMVEDKIQKETLK 130 (144)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhchh
Confidence 64433 4456666667666555543
No 316
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=20.46 E-value=73 Score=29.05 Aligned_cols=38 Identities=13% Similarity=-0.052 Sum_probs=22.5
Q ss_pred hHHHHHhHHHHHhcccCCCc-----hHHHHHhHHHHHHHHHHH
Q 031849 20 HDTLWCLGNAHTSHAFLTPD-----QDEAKEYFNKATLYFQQA 57 (152)
Q Consensus 20 ~dAlynLGnAy~~~g~l~~d-----~~~A~~~~ekA~~~FqkA 57 (152)
.-++||+|.+|+.+|...+- ...|-..|.+|..+|+-.
T Consensus 127 a~vLfNlaal~s~~A~~~~r~~~~~lK~A~~~fq~AAG~f~~l 169 (704)
T 2xs1_A 127 SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHI 169 (704)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887754321 122334555555555543
No 317
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=20.08 E-value=2.6e+02 Score=22.07 Aligned_cols=52 Identities=8% Similarity=0.100 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHhHHHHHhcccCCCchHHHHHhHHHHHHHHHHHHHcCC
Q 031849 2 ILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEP 62 (152)
Q Consensus 2 ieeAIs~le~AL~idP~~~dAlynLGnAy~~~g~l~~d~~~A~~~~ekA~~~FqkAleldP 62 (152)
..++...|+....-.=-.--|+|...-|.. -|..++|++|.+.|+++++-+=
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~---------lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKL---------LENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHH---------HHHTTCHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHH---------HHHcCCHHHHHHHHHHHHHcCC
Confidence 446677777766555555555555555543 2456799999999999999763
Done!