BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031854
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62302|RS13_SOYBN 40S ribosomal protein S13 OS=Glycine max GN=RPS13 PE=2 SV=1
Length = 151
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/123 (96%), Positives = 122/123 (99%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHSRGKGIS+SALPYKRTPPSWLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61 AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P59224|RS132_ARATH 40S ribosomal protein S13-2 OS=Arabidopsis thaliana GN=RPS13B PE=2
SV=1
Length = 151
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/123 (93%), Positives = 120/123 (97%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHSRGKGISASALPYKR+ PSWLK +SQDV+++ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61 PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P59223|RS131_ARATH 40S ribosomal protein S13-1 OS=Arabidopsis thaliana GN=RPS13A PE=2
SV=1
Length = 151
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/123 (92%), Positives = 119/123 (96%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHSRGKGISASALPYKR+ PSWLK + QDV+++ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61 PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P46298|RS13_PEA 40S ribosomal protein S13 OS=Pisum sativum GN=RPS13 PE=2 SV=1
Length = 151
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/123 (91%), Positives = 120/123 (97%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGR+HS+GKGIS+SALPY+RT PSWLKISSQDV++ ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1 MGRLHSKGKGISSSALPYRRTAPSWLKISSQDVDETICKFAKKGLTPSQIGVILRDSHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLER RKDKDSKFRLILVES
Sbjct: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q69UI1|RS132_ORYSJ 40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica
GN=Os08g0117300 PE=1 SV=1
Length = 151
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/123 (86%), Positives = 112/123 (91%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHSRGKGIS+SALPYKRTPPSWLK ++ DVE+ I K AKKG PSQIGV+LRD HGI
Sbjct: 1 MGRMHSRGKGISSSALPYKRTPPSWLKTAASDVEEMIMKAAKKGQMPSQIGVVLRDQHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61 PLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q69UI2|RS131_ORYSJ 40S ribosomal protein S13-1 OS=Oryza sativa subsp. japonica
GN=Os08g0117200 PE=2 SV=2
Length = 151
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/123 (85%), Positives = 112/123 (91%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHSRGKGIS+SA+PYKRTPPSW+K ++ DVE+ I K AKKG PSQIGV+LRD HGI
Sbjct: 1 MGRMHSRGKGISSSAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61 PLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q05761|RS13_MAIZE 40S ribosomal protein S13 OS=Zea mays GN=RPS13 PE=2 SV=1
Length = 151
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/123 (85%), Positives = 111/123 (90%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MG MHSRGKGIS+SALPYKRTPP+WLK ++ DVE+ I K AKKG PSQIGV+LRD HGI
Sbjct: 1 MGAMHSRGKGISSSALPYKRTPPTWLKTAASDVEEMITKAAKKGQMPSQIGVLLRDQHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61 PLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q9DFR6|RS13_GILMI 40S ribosomal protein S13 OS=Gillichthys mirabilis GN=rps13 PE=2
SV=3
Length = 151
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIFKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P62278|RS13_RAT 40S ribosomal protein S13 OS=Rattus norvegicus GN=Rps13 PE=1 SV=2
Length = 151
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P62301|RS13_MOUSE 40S ribosomal protein S13 OS=Mus musculus GN=Rps13 PE=1 SV=2
Length = 151
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P62277|RS13_HUMAN 40S ribosomal protein S13 OS=Homo sapiens GN=RPS13 PE=1 SV=2
Length = 151
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q6ITC7|RS13_CHICK 40S ribosomal protein S13 OS=Gallus gallus GN=RPS13 PE=2 SV=3
Length = 151
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q56JX8|RS13_BOVIN 40S ribosomal protein S13 OS=Bos taurus GN=RPS13 PE=2 SV=3
Length = 151
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q9WVH0|RS13_CRIGR 40S ribosomal protein S13 OS=Cricetulus griseus GN=RPS13 PE=3 SV=3
Length = 151
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLASDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P47772|RS13_ICTPU 40S ribosomal protein S13 OS=Ictalurus punctatus GN=rps13 PE=2 SV=3
Length = 151
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALP++R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPFRRSVPTWLKLTSDDVKEQIFKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLILVES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P49393|RS13_XENLA 40S ribosomal protein S13 OS=Xenopus laevis GN=rps13 PE=3 SV=2
Length = 151
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 114/123 (92%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P62300|RS13_WUCBA 40S ribosomal protein S13 OS=Wuchereria bancrofti GN=RPS13 PE=3
SV=2
Length = 151
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 113/123 (91%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS SALPY+R+ P+WLK++S++V++ + + AKKGL PSQIGVILRDSHG+
Sbjct: 1 MGRMHNPGKGISQSALPYRRSVPTWLKLTSEEVQEQVTRLAKKGLRPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KI+RILKA G+APEIPEDLYHLIKKAV IRKHLERNRKDKDSK+RLILVES
Sbjct: 61 AQVRRVTGNKIVRILKAKGMAPEIPEDLYHLIKKAVNIRKHLERNRKDKDSKYRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P62299|RS13_BRUPA 40S ribosomal protein S13 OS=Brugia pahangi GN=RPS13 PE=2 SV=2
Length = 151
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 113/123 (91%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS SALPY+R+ P+WLK++S++V++ + + AKKGL PSQIGVILRDSHG+
Sbjct: 1 MGRMHNPGKGISQSALPYRRSVPTWLKLTSEEVQEQVTRLAKKGLRPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG+KI+RILKA G+APEIPEDLYHLIKKAV IRKHLERNRKDKDSK+RLILVES
Sbjct: 61 AQVRRVTGNKIVRILKAKGMAPEIPEDLYHLIKKAVNIRKHLERNRKDKDSKYRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P33192|RS13_CANMA 40S ribosomal protein S13 OS=Candida maltosa GN=RPS13 PE=3 SV=2
Length = 151
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 111/123 (90%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHS GKGIS+SA+PY R PSW K+SS +V + + K+A+KGLTPSQIGVILRD+HG+
Sbjct: 1 MGRMHSAGKGISSSAIPYSRNAPSWFKLSSDEVVEQVIKYARKGLTPSQIGVILRDAHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
+Q K VTG+K+LRILK++GLAPE+PEDLY LIKKAVA+RKHLERNRKDKDSKFRLIL+ES
Sbjct: 61 SQAKIVTGNKVLRILKSNGLAPELPEDLYFLIKKAVAVRKHLERNRKDKDSKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q962R6|RS13_SPOFR 40S ribosomal protein S13 OS=Spodoptera frugiperda GN=RpS13 PE=2
SV=3
Length = 151
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 112/123 (91%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS SALPY+R+ P+WLK+++ DV++ I K KKGLTPSQIGV+LRDSHG+
Sbjct: 1 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVES
Sbjct: 61 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q8I7D6|RS13_CIOIN 40S ribosomal protein S13 OS=Ciona intestinalis GN=RPS13 PE=2 SV=3
Length = 151
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/123 (77%), Positives = 113/123 (91%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S+SALPY+R+ P+WLK+SS+DV++ I K AKKGL PSQIGVILRDSHG
Sbjct: 1 MGRMHAPGKGLSSSALPYRRSVPTWLKLSSEDVKEQIYKLAKKGLRPSQIGVILRDSHGX 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG++ILR+LKA GLAP++PED+YHLIKKAVA+RKHLERNRKD DSKFRLILVES
Sbjct: 61 AQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAMRKHLERNRKDTDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P78571|RS13_AGABI 40S ribosomal protein S13 OS=Agaricus bisporus GN=RPS13 PE=2 SV=1
Length = 151
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 110/123 (89%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS+SALPY+RTPPSWLK +S++V + I K A+KGLTPSQIGV LR+SHGI
Sbjct: 1 MGRMHAPGKGISSSALPYRRTPPSWLKTTSEEVVEQIVKLARKGLTPSQIGVTLRNSHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
QV+ VTG+KILRILK+ GL P IPEDL+HLIKKAVA+RKH+E NRKDKDSKFRLIL+ES
Sbjct: 61 PQVRFVTGNKILRILKSQGLGPSIPEDLWHLIKKAVAVRKHMETNRKDKDSKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|O77303|RS13_LUMRU 40S ribosomal protein S13 OS=Lumbricus rubellus GN=RPS13 PE=2 SV=3
Length = 151
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/123 (79%), Positives = 108/123 (87%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS SALPY+R+ P+WLK+ DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGISQSALPYRRSVPTWLKLGPDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQ + V G+KILRILKA GLAP IPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61 AQTRHVAGNKILRILKAKGLAPTIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P05756|RS13_YEAST 40S ribosomal protein S13 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS13 PE=1 SV=3
Length = 151
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 89/123 (72%), Positives = 111/123 (90%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHS GKGIS+SA+PY R P+W K+SS+ V + I K+A+KGLTPSQIGV+LRD+HG+
Sbjct: 1 MGRMHSAGKGISSSAIPYSRNAPAWFKLSSESVIEQIVKYARKGLTPSQIGVLLRDAHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Q + +TG+KI+RILK++GLAPEIPEDLY+LIKKAV++RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 TQARVITGNKIMRILKSNGLAPEIPEDLYYLIKKAVSVRKHLERNRKDKDAKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q8I7U0|RS13_PLUXY 40S ribosomal protein S13 OS=Plutella xylostella GN=RpS13 PE=2 SV=3
Length = 151
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 111/123 (90%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS SALPY+R+ P+WLK+++ DV++ I K KKGLTPSQIGV+LRDSHG+
Sbjct: 1 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+ KHLERNRKDKDSKFRLILVES
Sbjct: 61 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMGKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q8MUR2|RS13_CHOPR 40S ribosomal protein S13 OS=Choristoneura parallela GN=RpS13 PE=2
SV=3
Length = 151
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 110/123 (89%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS SALPY+R+ P+WLK+++ DV++ I K KKGLTPSQIGV LRDSHG+
Sbjct: 1 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVKLRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
QV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVES
Sbjct: 61 VQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q03334|RS13_DROME 40S ribosomal protein S13 OS=Drosophila melanogaster GN=RpS13 PE=2
SV=3
Length = 151
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 110/123 (89%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS SALPY+RT PSWLK+++ DV++ I K KKGLTPS+IG+ILRDSHG+
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ V G+KILRI+K+ GL P+IPEDLYH+IKKAVAIRKHLERNRKDKD KFRLILVES
Sbjct: 61 AQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P28189|RS13_SCHPO 40S ribosomal protein S13 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps13 PE=1 SV=2
Length = 151
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 110/123 (89%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHS+GKGI++SALPY R+PP+W K + V + I KF+KKG++PSQIGV LRDSHGI
Sbjct: 1 MGRMHSKGKGIASSALPYVRSPPAWCKADADSVVEQILKFSKKGMSPSQIGVTLRDSHGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
QV+ +TG KI+RILKA+GLAPE+PEDLY+LIKKAV++RKHLERNRKDKDSKFRLIL+ES
Sbjct: 61 PQVRFITGQKIMRILKANGLAPELPEDLYNLIKKAVSVRKHLERNRKDKDSKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P52811|RS13_ANOGA 40S ribosomal protein S13 OS=Anopheles gambiae GN=RpS13 PE=2 SV=2
Length = 151
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 110/123 (89%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKGIS SALPY+R+ PSWLK+S++DV++ I K KKG+TPSQIG+ILRDSHG+
Sbjct: 1 MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQV+ V G+K+LRI+KA GL P+IPEDLY LIKKAV+IRKHLERNRKD DSKFRLIL+ES
Sbjct: 61 AQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P51404|RS13_CAEEL 40S ribosomal protein S13 OS=Caenorhabditis elegans GN=rps-13 PE=3
SV=2
Length = 151
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 87/123 (70%), Positives = 109/123 (88%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG++ SA+PY+R+ PSW K+++++V+D I K AKKGL PSQIGVILRDSHG+
Sbjct: 1 MGRMHNPGKGMAKSAIPYRRSVPSWQKMTAEEVQDQIVKMAKKGLRPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
QV+ + G+KI RILK+ G+APE+PEDLYHL+KKAVAIRKHLER+RKD DSK+RLILVES
Sbjct: 61 GQVRRLAGNKIFRILKSKGMAPELPEDLYHLVKKAVAIRKHLERSRKDIDSKYRLILVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|Q54PH8|RS13_DICDI 40S ribosomal protein S13 OS=Dictyostelium discoideum GN=rps13 PE=3
SV=1
Length = 151
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 99/123 (80%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMHS GKGIS S+LPY R P +W K ++ +V + +CK AK+G TPS+IG LRDS G+
Sbjct: 1 MGRMHSNGKGISGSSLPYNRKPHAWTKPTASEVCETVCKLAKRGYTPSKIGSSLRDSLGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
AQVK+VTGSKILRILK +GLAP IPEDLYHLIKKAV I KHL+R RKD D KF L LVES
Sbjct: 61 AQVKNVTGSKILRILKVNGLAPTIPEDLYHLIKKAVTINKHLQRARKDYDGKFHLRLVES 120
Query: 121 RIH 123
RIH
Sbjct: 121 RIH 123
>sp|P62279|RS13_PIG 40S ribosomal protein S13 (Fragment) OS=Sus scrofa GN=RPS13 PE=2
SV=2
Length = 107
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 98/107 (91%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
MGRMH+ GKG+S SALPY+R+ P+WLK++S DV++ I K AKKGLTPSQIGVILRDSHG+
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRK 107
AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRK
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRK 107
>sp|P27072|RS13_MUSDO 40S ribosomal protein S13 (Fragment) OS=Musca domestica GN=RpS13
PE=3 SV=1
Length = 114
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 78/85 (91%)
Query: 39 KFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAI 98
K KKGLTPS+IG+ILRDSHG+AQV+ V G+KILRI+K+ GL P+IPEDLYH+IKKAVAI
Sbjct: 2 KLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAI 61
Query: 99 RKHLERNRKDKDSKFRLILVESRIH 123
RKHLERNRKDKD KFRLILVESRIH
Sbjct: 62 RKHLERNRKDKDGKFRLILVESRIH 86
>sp|Q8TV08|RS15_METKA 30S ribosomal protein S15/S13e OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=rps15 PE=3
SV=1
Length = 149
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 90/132 (68%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M RMHSR +G S S P + PPSW++ S ++VE + AK+G P+ IG+ LRD +GI
Sbjct: 1 MARMHSRDRGKSGSTRPPRVAPPSWVEYSPEEVESLVVDLAKQGYEPAMIGIKLRDEYGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VK +TG KI IL+ HGLAPE+PEDL +LI++A +R+HL+R+ KD SK L L+ES
Sbjct: 61 PDVKLITGKKITEILEEHGLAPELPEDLLNLIRRAKRVREHLKRHPKDLHSKRGLQLIES 120
Query: 121 RIHDWLATTRRQ 132
+IH + +R+
Sbjct: 121 KIHRLVKYYKRK 132
>sp|Q5JGJ4|RS15_PYRKO 30S ribosomal protein S15/S13e OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=rps15 PE=3 SV=1
Length = 151
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 91/131 (69%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M R+H+R +G S S P + PP+W++ ++++VE + K K+G + + IG ILRD +GI
Sbjct: 1 MARIHARKRGKSGSKRPPRTAPPAWVEYTAEEVEALVVKLRKEGYSTAMIGTILRDQYGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VK +TG KI +IL+ +GLAPEIPEDL LI++AV +RKHLE++ KDK S+ L L+ES
Sbjct: 61 PSVKLITGKKITKILEENGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDKHSRRGLQLIES 120
Query: 121 RIHDWLATTRR 131
+I + RR
Sbjct: 121 KIRRLVKYYRR 131
>sp|P54012|RS15_METJA 30S ribosomal protein S15/S13e OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=rps15 PE=3 SV=2
Length = 153
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 87/122 (71%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M RMH+R +G S S P ++ P W++ + + VE + + AKKG +QIG+ILRD++GI
Sbjct: 1 MARMHARKRGRSGSKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VK +TG KI +I+K HGL P++PEDL +L+++AV +RKHLE++ KD SK L L+ES
Sbjct: 61 PDVKLITGKKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIES 120
Query: 121 RI 122
+I
Sbjct: 121 KI 122
>sp|A1RXJ1|RS15_THEPD 30S ribosomal protein S15/S13e OS=Thermofilum pendens (strain Hrk
5) GN=rps15 PE=3 SV=1
Length = 148
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 86/127 (67%)
Query: 6 SRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKS 65
S+ KG S S P + P W+K+ ++VE+ + +KG PS IGVILRD +GI VK+
Sbjct: 4 SKEKGRSGSTRPPQLKKPEWVKMRPEEVEELVVSLYRKGYPPSMIGVILRDQYGIPMVKA 63
Query: 66 VTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHDW 125
VTG +L+IL+ GLAPEIPEDL +L+K+A+ +RKHLE + KD SK L L+ES+IH
Sbjct: 64 VTGKSVLQILRERGLAPEIPEDLMNLMKRAIRVRKHLEEHPKDYHSKRGLQLIESKIHRL 123
Query: 126 LATTRRQ 132
+ +R+
Sbjct: 124 VKYYKRE 130
>sp|A6UUL9|RS15_META3 30S ribosomal protein S15/S13e OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rps15 PE=3 SV=1
Length = 151
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 82/122 (67%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M R+HS +G S S P + P+W I++++ E+ I K AK+G + IG+ILRDS+GI
Sbjct: 1 MARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VK VTG + +I+K + + PEIPEDL++L+KKA+ +R HLE N KD SK L L ES
Sbjct: 61 PDVKLVTGKSVAQIMKDNNVYPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTES 120
Query: 121 RI 122
+I
Sbjct: 121 KI 122
>sp|A4WMA2|RS15_PYRAR 30S ribosomal protein S15/S13e OS=Pyrobaculum arsenaticum (strain
DSM 13514 / JCM 11321) GN=rps15 PE=3 SV=1
Length = 154
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 85/123 (69%)
Query: 9 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68
KG S S P T P+W++ + ++VE + A++G PSQIG++LRD +GI VKS+TG
Sbjct: 12 KGRSGSVRPAHPTVPTWIQYTPEEVEQLAVELARRGFQPSQIGIVLRDQYGIPLVKSITG 71
Query: 69 SKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHDWLAT 128
K++++L+ HG+ EIPEDL +LI++A+ IRKHLE + KD S+ L LVES+IH +
Sbjct: 72 KKLVKVLEEHGIKYEIPEDLLNLIRRALRIRKHLEEHPKDMSSRRGLQLVESKIHRLIKY 131
Query: 129 TRR 131
+R
Sbjct: 132 YKR 134
>sp|Q0W938|RS15_UNCMA 30S ribosomal protein S15/S13e OS=Uncultured methanogenic archaeon
RC-I GN=rps15 PE=3 SV=1
Length = 152
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 81/122 (66%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M +MH+R KG S S P ++TPP+W +S ++VE + K + T SQ+G+ILRD +G+
Sbjct: 1 MAKMHTRRKGRSRSTRPVRKTPPAWFTMSKEEVEKLVVKTYGQNATTSQVGIILRDKYGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
+ VTG K+ ILK +G P++PEDL +LIKKA+ + KHL+ N KD +K L L ES
Sbjct: 61 PDITQVTGKKVTAILKENGTGPKLPEDLVNLIKKAIRLHKHLDENHKDLHNKRALQLTES 120
Query: 121 RI 122
++
Sbjct: 121 KV 122
>sp|A8MCD3|RS15_CALMQ 30S ribosomal protein S15/S13e OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rps15
PE=3 SV=1
Length = 150
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 81/123 (65%)
Query: 9 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68
+G S S P +T P WL S +DVE + + A++G TPS IGVILRD +GI VK VT
Sbjct: 9 RGSSGSVRPATKTIPPWLSYSPEDVERLVVELARRGFTPSLIGVILRDQYGIPLVKIVTN 68
Query: 69 SKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHDWLAT 128
+I IL+ +GL P+IPEDL LI++AV IR+HLE + KD +K L+L ES+IH +
Sbjct: 69 KRITEILEENGLKPQIPEDLMALIRRAVNIRRHLEEHPKDMSAKKGLLLTESKIHRLIKY 128
Query: 129 TRR 131
+R
Sbjct: 129 YKR 131
>sp|O29457|RS15_ARCFU 30S ribosomal protein S15/S13e OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps15 PE=3 SV=1
Length = 152
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 83/122 (68%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M R+H+R +G S S Y+ +PP W+ +S ++VE + + +G PS IG+ILRD +GI
Sbjct: 1 MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGI 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VK VTG KI +ILK HG+ + PEDL LIKKA+ +R HLE +RKDK ++ L L+E+
Sbjct: 61 PSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEA 120
Query: 121 RI 122
+I
Sbjct: 121 KI 122
>sp|A1RSM4|RS15_PYRIL 30S ribosomal protein S15/S13e OS=Pyrobaculum islandicum (strain
DSM 4184 / JCM 9189) GN=rps15 PE=3 SV=1
Length = 151
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 83/123 (67%)
Query: 9 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68
KG S S P T P+W++ + +VE + + A++G PSQIG+ILRD +GI VK +TG
Sbjct: 9 KGRSRSVRPAHPTVPTWIQYTPDEVEQLVVELARRGFPPSQIGIILRDQYGIPLVKPITG 68
Query: 69 SKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHDWLAT 128
K+ +IL+ HG+ EIPEDL +LIK+A+ IRKHLE + KD S+ L LVES+IH +
Sbjct: 69 KKLTKILEEHGIRQEIPEDLLNLIKRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKY 128
Query: 129 TRR 131
+R
Sbjct: 129 YKR 131
>sp|A2SQ60|RS15_METLZ 30S ribosomal protein S15/S13e OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=rps15 PE=3 SV=1
Length = 152
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 84/122 (68%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M RMH+R +GI++S PY++ P+W +++E I + K GLT +QIG++LRD HG+
Sbjct: 1 MARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
VK TG +I I++ + L +IPEDL +L+ KA+ +RKHLE+NRKD +K +L L E+
Sbjct: 61 PNVKLATGKRINAIVRENDLDTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEA 120
Query: 121 RI 122
++
Sbjct: 121 KV 122
>sp|A3MVD1|RS15_PYRCJ 30S ribosomal protein S15/S13e OS=Pyrobaculum calidifontis (strain
JCM 11548 / VA1) GN=rps15 PE=3 SV=1
Length = 151
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 84/123 (68%)
Query: 9 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68
KG S+S P T P+W++ + ++VE + A++G PSQIG+ILRD +GI VK +TG
Sbjct: 9 KGRSSSVRPPHPTVPTWIQYTPEEVEQLAVELARRGFPPSQIGIILRDQYGIPLVKPITG 68
Query: 69 SKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHDWLAT 128
K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IH +
Sbjct: 69 KKLTKILEEHGIKQELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKY 128
Query: 129 TRR 131
+R
Sbjct: 129 YKR 131
>sp|Q8ZT11|RS15_PYRAE 30S ribosomal protein S15/S13e OS=Pyrobaculum aerophilum (strain
ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rps15 PE=3 SV=1
Length = 151
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 84/123 (68%)
Query: 9 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68
KG S S P T P+W++ + ++VE + + A++G PSQIG+ILRD +GI V+ +TG
Sbjct: 9 KGRSRSVRPAHPTVPTWIQYTPEEVEQLVVELARRGFQPSQIGLILRDQYGIPLVRPITG 68
Query: 69 SKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHDWLAT 128
K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IH +
Sbjct: 69 KKLTKILEEHGIKYELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLVKY 128
Query: 129 TRR 131
+R
Sbjct: 129 YKR 131
>sp|Q9V2K9|RS15_PYRAB 30S ribosomal protein S15/S13e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps15 PE=3 SV=1
Length = 158
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 85/139 (61%), Gaps = 7/139 (5%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M RMH+R +G S S P + PP WL+ + +D+E+ + K K+G + + IG ILRD +GI
Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGI 60
Query: 61 AQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKF 113
VK I RIL+ HGLAPEIPEDL LIK+AV +RKHLE++ KD S
Sbjct: 61 PTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMR 120
Query: 114 RLILVESRIHDWLATTRRQ 132
L L+ES+I + +R+
Sbjct: 121 GLQLIESKIRRLVKYYKRK 139
>sp|Q8PVA5|RS15_METMA 30S ribosomal protein S15/S13e OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps15 PE=3 SV=1
Length = 152
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 79/122 (64%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M +MH++ KG S+S P + PP W KI + +V K+G++ S+IG+ILRD +G+
Sbjct: 1 MAKMHTKRKGKSSSTRPNRTEPPEWCKIGADEVTTITLDLWKQGVSTSEIGMILRDRYGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
K VTG KI ILK + +AP +PEDL +LI KA+ +RKHL N+KD +K L L ES
Sbjct: 61 PDAKLVTGKKITTILKENNVAPNLPEDLTNLIVKALGLRKHLSTNKKDVHNKRALNLTES 120
Query: 121 RI 122
+I
Sbjct: 121 KI 122
>sp|Q8TS56|RS15_METAC 30S ribosomal protein S15/S13e OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=rps15 PE=3 SV=1
Length = 152
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 80/122 (65%)
Query: 1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60
M +MH++ KG S+S P + PP W KI + +V + K+G++ ++IG++LRD +G+
Sbjct: 1 MAKMHTKRKGKSSSTRPIRTDPPEWCKIGADEVTTIVLDLWKQGVSTAEIGMVLRDRYGV 60
Query: 61 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
K +TG K+ ILK + +AP IPEDL +LI KA+ +RKHL N+KD +K L L ES
Sbjct: 61 PDAKLITGKKVTTILKENNVAPNIPEDLTNLIVKALGLRKHLSVNKKDVHNKRSLNLTES 120
Query: 121 RI 122
+I
Sbjct: 121 KI 122
>sp|A3DMT2|RS15_STAMF 30S ribosomal protein S15/S13e OS=Staphylothermus marinus (strain
ATCC 43588 / DSM 3639 / F1) GN=rps15 PE=3 SV=1
Length = 154
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Query: 7 RGKGISASALPYKRTPPSWLKI--SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVK 64
R KG S S P + PP WLK+ S D+E + + AKKG TPS IG+ILRD +G+ VK
Sbjct: 5 RDKGQSHSTRPARAGPPRWLKLDMSPSDIELLVVELAKKGYTPSMIGIILRDQYGVPLVK 64
Query: 65 SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHD 124
VTG K+++IL+ HG+ +PEDL L++KAV +R+HLE + KD +K L+ +ES+IH
Sbjct: 65 QVTGKKLVQILEKHGIKLPVPEDLLFLMRKAVNLRRHLEEHPKDFHAKKGLLDLESKIHR 124
Query: 125 WLATTRR 131
+ +R
Sbjct: 125 LVKYYKR 131
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,319,561
Number of Sequences: 539616
Number of extensions: 2087698
Number of successful extensions: 5880
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5781
Number of HSP's gapped (non-prelim): 103
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)