Query 031856
Match_columns 152
No_of_seqs 151 out of 1117
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 09:47:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2aak_A UBC1, ubiquitin conjuga 100.0 2E-54 7E-59 309.0 19.2 152 1-152 1-152 (152)
2 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.6E-54 8.9E-59 313.0 19.2 150 1-150 1-150 (169)
3 2ucz_A UBC7, ubiquitin conjuga 100.0 5.9E-54 2E-58 310.4 19.0 150 1-150 1-164 (165)
4 4gpr_A Ubiquitin-conjugating e 100.0 2.4E-53 8.4E-58 303.1 20.0 149 2-150 2-150 (151)
5 1zdn_A Ubiquitin-conjugating e 100.0 1.3E-53 4.5E-58 306.5 17.9 149 1-149 10-158 (158)
6 2c2v_B Ubiquitin-conjugating e 100.0 4.8E-54 1.7E-58 307.6 15.5 150 1-150 2-151 (154)
7 3h8k_A Ubiquitin-conjugating e 100.0 5.6E-53 1.9E-57 305.0 20.0 149 2-150 1-163 (164)
8 2ayv_A Ubiquitin-conjugating e 100.0 1.3E-52 4.4E-57 303.3 19.7 148 2-149 19-166 (166)
9 1z2u_A Ubiquitin-conjugating e 100.0 9.6E-53 3.3E-57 299.8 18.7 149 2-150 2-150 (150)
10 2e2c_A Ubiquitin conjugating e 100.0 9.7E-53 3.3E-57 301.5 18.4 150 1-151 6-155 (156)
11 2c4o_A Ubiquitin-conjugating e 100.0 2.4E-52 8.3E-57 301.7 20.2 149 2-150 17-165 (165)
12 2gjd_A Ubiquitin-conjugating e 100.0 1.6E-52 5.3E-57 300.7 18.0 150 1-150 1-157 (157)
13 2bep_A Ubiquitin-conjugating e 100.0 3.1E-52 1.1E-56 299.7 19.5 150 1-150 5-158 (159)
14 1yh2_A HSPC150 protein similar 100.0 5.1E-52 1.7E-56 301.2 20.1 149 2-150 2-154 (169)
15 2r0j_A Ubiquitin carrier prote 100.0 1.8E-52 6.1E-57 298.1 16.7 146 5-150 2-147 (149)
16 3rcz_B SUMO-conjugating enzyme 100.0 5E-52 1.7E-56 299.4 18.3 148 2-149 8-162 (163)
17 1i7k_A Ubiquitin-conjugating e 100.0 1.8E-52 6E-57 305.6 15.8 149 1-150 27-175 (179)
18 2grr_A Ubiquitin-conjugating e 100.0 4.8E-52 1.6E-56 299.2 17.8 151 1-151 4-161 (161)
19 1jat_A Ubiquitin-conjugating e 100.0 2.2E-52 7.6E-57 299.3 15.1 149 3-151 4-152 (155)
20 3k9o_A Ubiquitin-conjugating e 100.0 9.6E-52 3.3E-56 307.2 18.5 150 1-150 2-155 (201)
21 1fxt_A Ubiquitin-conjugating e 100.0 3E-52 1E-56 296.9 15.1 146 5-150 2-149 (149)
22 1yrv_A Ubiquitin-conjugating l 100.0 6.8E-52 2.3E-56 300.2 15.3 146 1-147 20-168 (169)
23 3bzh_A Ubiquitin-conjugating e 100.0 6.5E-51 2.2E-55 300.7 19.9 148 3-150 47-194 (194)
24 2pwq_A Ubiquitin conjugating e 100.0 2.1E-51 7.1E-56 307.5 17.5 150 1-150 20-170 (216)
25 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3.2E-51 1.1E-55 302.0 17.9 148 3-150 31-192 (193)
26 3rz3_A Ubiquitin-conjugating e 100.0 4.7E-51 1.6E-55 299.4 18.3 149 3-151 6-174 (183)
27 1wzv_A Ubiquitin-conjugating e 100.0 6.3E-51 2.1E-55 291.8 17.6 149 2-151 2-152 (155)
28 3e46_A Ubiquitin-conjugating e 100.0 2.5E-50 8.5E-55 307.7 19.6 150 1-150 54-207 (253)
29 2y9m_A Ubiquitin-conjugating e 100.0 3.7E-50 1.3E-54 292.1 18.5 150 1-150 3-168 (172)
30 3fn1_B NEDD8-conjugating enzym 100.0 9.4E-50 3.2E-54 288.9 18.4 147 3-150 13-167 (167)
31 2awf_A Ubiquitin-conjugating e 100.0 2.2E-50 7.4E-55 293.2 14.8 143 2-144 15-172 (172)
32 1y8x_A Ubiquitin-conjugating e 100.0 1.2E-49 3.9E-54 286.4 16.9 144 3-149 5-149 (160)
33 1tte_A Ubiquitin-conjugating e 100.0 2E-50 6.9E-55 302.0 13.1 147 4-150 2-150 (215)
34 2nvu_C NEDD8-conjugating enzym 100.0 2.3E-49 8E-54 289.5 16.6 145 2-149 24-169 (180)
35 2onu_A Ubiquitin-conjugating e 100.0 6E-50 2.1E-54 285.7 11.1 145 4-151 2-148 (152)
36 2z5d_A Ubiquitin-conjugating e 100.0 1.6E-49 5.3E-54 289.7 12.7 146 1-150 20-169 (179)
37 1c4z_D UBCH7, ubiquitin conjug 100.0 2.5E-49 8.4E-54 283.3 11.3 146 4-150 2-149 (154)
38 3o2u_A NEDD8-conjugating enzym 100.0 5.2E-48 1.8E-52 284.6 15.6 144 3-149 28-178 (190)
39 1yf9_A Ubiquitin carrier prote 100.0 2.6E-48 8.8E-53 281.9 13.3 143 4-150 12-156 (171)
40 4ddg_A Ubiquitin-conjugating e 100.0 1.6E-47 5.6E-52 309.7 19.1 148 3-150 2-149 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 9E-48 3.1E-52 278.4 11.9 143 1-143 5-164 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 2E-44 6.8E-49 257.9 10.1 130 3-133 20-156 (156)
43 2fo3_A Ubiquitin-conjugating e 100.0 1.7E-43 5.7E-48 245.0 13.8 118 1-119 4-122 (125)
44 3ceg_A Baculoviral IAP repeat- 100.0 2.4E-43 8.1E-48 276.2 15.3 149 1-149 73-242 (323)
45 2h2y_A Ubiquitin-conjugating e 100.0 1.6E-42 5.3E-47 243.2 15.2 115 4-118 20-135 (136)
46 2a4d_A Ubiquitin-conjugating e 100.0 7.6E-43 2.6E-47 250.3 13.6 126 2-127 23-156 (160)
47 1jat_B Ubiquitin-conjugating e 100.0 5.8E-44 2E-48 251.1 6.7 129 1-130 2-138 (138)
48 2a7l_A Hypothetical ubiquitin- 100.0 4.3E-42 1.5E-46 240.7 12.8 113 1-114 20-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 4.4E-42 1.5E-46 248.8 9.5 125 3-127 34-166 (170)
50 1zuo_A Hypothetical protein LO 100.0 4.9E-42 1.7E-46 251.8 4.1 142 1-150 24-182 (186)
51 2f4w_A Ubiquitin-conjugating e 100.0 3.6E-39 1.2E-43 236.9 15.5 117 3-121 13-132 (187)
52 2z6o_A UFM1-conjugating enzyme 100.0 1.9E-30 6.5E-35 184.1 2.0 101 1-107 21-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 1.1E-20 3.6E-25 135.0 10.6 114 6-120 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 7E-21 2.4E-25 132.3 0.7 95 6-106 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 3.1E-15 1.1E-19 105.0 7.7 101 9-115 25-138 (146)
56 2ebm_A RWD domain-containing p 96.8 0.012 4.2E-07 39.4 9.0 67 6-74 12-78 (128)
57 2day_A Ring finger protein 25; 96.1 0.068 2.3E-06 35.7 9.3 68 8-75 12-83 (128)
58 2yz0_A Serine/threonine-protei 95.6 0.16 5.4E-06 34.3 9.7 67 7-74 13-85 (138)
59 3zqs_A E3 ubiquitin-protein li 95.6 0.16 5.4E-06 36.6 9.8 84 7-114 4-87 (186)
60 2daw_A RWD domain containing p 94.4 0.22 7.7E-06 34.4 7.7 24 52-75 76-99 (154)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 93.5 0.55 1.9E-05 31.4 8.2 68 6-74 12-86 (137)
62 2ebk_A RWD domain-containing p 93.3 0.17 5.8E-06 33.7 5.3 66 8-74 11-79 (128)
63 2dax_A Protein C21ORF6; RWD do 91.4 0.16 5.6E-06 34.9 3.4 25 51-75 73-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 86.6 0.6 2.1E-05 21.7 2.3 21 4-24 5-25 (26)
65 2cwb_A Chimera of immunoglobul 76.2 0.53 1.8E-05 30.8 0.0 33 114-146 19-51 (108)
66 2fkn_A Urocanate hydratase; ro 70.4 6.5 0.00022 32.4 5.0 29 124-152 278-306 (552)
67 1x87_A Urocanase protein; stru 69.7 6.9 0.00024 32.2 5.0 29 124-152 277-305 (551)
68 1uwk_A Urocanate hydratase; hy 69.5 7.1 0.00024 32.2 5.0 29 124-152 282-310 (557)
69 3rls_A YAF9, protein AF-9 homo 40.5 78 0.0027 22.2 5.8 46 31-78 30-75 (175)
70 2bum_A Protocatechuate 3,4-dio 38.1 29 0.001 25.0 3.4 27 48-74 108-139 (209)
71 2jrw_A Cyclic extended PEP.1; 34.0 13 0.00043 17.1 0.6 17 64-80 4-20 (26)
72 3qrl_A Transcription initiatio 30.7 1.2E+02 0.0042 20.4 5.5 44 33-78 32-78 (140)
73 2cu9_A Spcia1, histone chapero 29.0 1E+02 0.0035 21.3 4.8 39 31-69 35-86 (161)
74 2f4m_B UV excision repair prot 27.7 64 0.0022 18.5 3.1 20 122-141 37-56 (61)
75 1u9d_A Hypothetical protein VC 26.4 1.4E+02 0.0047 19.5 5.1 29 5-33 32-60 (122)
76 3pft_A Flavin reductase; desul 26.4 39 0.0013 22.8 2.3 68 11-95 5-75 (157)
77 1pve_A HHR23B, UV excision rep 25.4 65 0.0022 19.1 2.9 22 121-142 38-59 (72)
78 2bum_B Protocatechuate 3,4-dio 23.5 41 0.0014 24.8 2.1 26 49-74 134-166 (241)
79 2ccv_A Helix pomatia agglutini 22.7 1.2E+02 0.0042 18.9 4.1 26 49-75 27-52 (101)
80 1roc_A Anti-silencing protein 22.3 1.5E+02 0.0053 20.3 4.7 35 31-65 36-83 (155)
81 2xsu_A Catechol 1,2 dioxygenas 21.8 47 0.0016 25.6 2.2 24 50-73 188-229 (312)
82 2azq_A Catechol 1,2-dioxygenas 21.6 47 0.0016 25.5 2.2 24 50-73 184-225 (311)
83 3n9t_A PNPC; phospholipid bind 21.5 48 0.0016 25.2 2.2 25 49-73 180-222 (290)
84 1tmx_A Hydroxyquinol 1,2-dioxy 21.4 48 0.0017 25.2 2.2 25 49-73 183-225 (293)
85 3t63_M 3,4-PCD, protocatechuat 21.4 49 0.0017 24.4 2.1 25 49-73 133-164 (238)
86 2c5k_P Vacuolar protein sortin 20.9 54 0.0018 15.4 1.5 14 5-18 11-24 (26)
87 3t63_A 3,4-PCD, protocatechuat 20.8 58 0.002 23.3 2.4 23 51-73 102-129 (200)
88 2boy_A 3-chlorocatechol 1,2-di 20.3 53 0.0018 24.4 2.2 24 50-73 154-195 (254)
No 1
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2e-54 Score=309.02 Aligned_cols=152 Identities=95% Similarity=1.536 Sum_probs=147.9
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
||+.|.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhhcC
Q 031856 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 152 (152)
Q Consensus 81 v~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~~ 152 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++.+
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~~ 152 (152)
T 2aak_A 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152 (152)
T ss_dssp BCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC--
T ss_pred CCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998764
No 2
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-54 Score=312.98 Aligned_cols=150 Identities=65% Similarity=1.209 Sum_probs=146.7
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
||+.|.+||++|+++|++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++++++|.++||+|++++++
T Consensus 81 I~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 81 VYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp BCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875
No 3
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=5.9e-54 Score=310.37 Aligned_cols=150 Identities=41% Similarity=0.860 Sum_probs=145.3
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecC-CCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHP 79 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~-~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hp 79 (152)
||+.|.+||++|+++|++++++||++.+.+ +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 899999999999999999999999999965 7999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceeecCc-------------CCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHH
Q 031856 80 NIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVE 146 (152)
Q Consensus 80 nv~~~G~icl~~l-------------~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~ 146 (152)
||+.+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++
T Consensus 81 Nv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~ 160 (165)
T 2ucz_A 81 NIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSIL 160 (165)
T ss_dssp TBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9999999999999 678999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 031856 147 QSWT 150 (152)
Q Consensus 147 ~s~~ 150 (152)
+|++
T Consensus 161 ~~~~ 164 (165)
T 2ucz_A 161 KSLG 164 (165)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9986
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.4e-53 Score=303.10 Aligned_cols=149 Identities=42% Similarity=0.839 Sum_probs=145.6
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv 81 (152)
++.|.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.||+++|++|+++|.++||+|+++++.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 82 NKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999874
No 5
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-53 Score=306.53 Aligned_cols=149 Identities=34% Similarity=0.702 Sum_probs=145.9
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
||+.+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 10 ~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 89 (158)
T 1zdn_A 10 LPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPN 89 (158)
T ss_dssp SCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031856 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 81 v~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.||+++|++|+++|.++||+|+++++
T Consensus 90 v~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 90 VGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp BCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999874
No 6
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-54 Score=307.61 Aligned_cols=150 Identities=37% Similarity=0.731 Sum_probs=144.9
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
||..+.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 68888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++||+|+++++.
T Consensus 82 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 82 VDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp BCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875
No 7
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=5.6e-53 Score=305.01 Aligned_cols=149 Identities=41% Similarity=0.850 Sum_probs=144.5
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEeecCC-CcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~-n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
|+.|.+||++|+++++++++.|+++.+.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 a~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 1 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 467999999999999999999999999765 9999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHH
Q 031856 81 IYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 147 (152)
Q Consensus 81 v~~~G~icl~~l~-------------~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~ 147 (152)
|+.+|.||+++|. ++|+|++||++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 160 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 160 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999997 789999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 031856 148 SWT 150 (152)
Q Consensus 148 s~~ 150 (152)
|++
T Consensus 161 s~~ 163 (164)
T 3h8k_A 161 SLG 163 (164)
T ss_dssp HHT
T ss_pred hhc
Confidence 986
No 8
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-52 Score=303.30 Aligned_cols=148 Identities=41% Similarity=0.865 Sum_probs=144.1
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv 81 (152)
++.+.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 19 FQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031856 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 82 ~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++
T Consensus 99 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 99 NSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999874
No 9
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=9.6e-53 Score=299.76 Aligned_cols=149 Identities=45% Similarity=0.900 Sum_probs=145.0
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv 81 (152)
|..|.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999763
No 10
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=9.7e-53 Score=301.48 Aligned_cols=150 Identities=39% Similarity=0.747 Sum_probs=145.1
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
|++.+.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 85 (156)
T 2e2c_A 6 ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPN 85 (156)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031856 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 81 v~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.||+++| +|+++|.++||+|+++++..
T Consensus 86 v~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 86 VDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred CccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999 89999999999999998753
No 11
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=2.4e-52 Score=301.67 Aligned_cols=149 Identities=46% Similarity=0.918 Sum_probs=145.0
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv 81 (152)
.+.+.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV 96 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 96 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 97 ~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 97 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999998763
No 12
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.6e-52 Score=300.65 Aligned_cols=150 Identities=39% Similarity=0.760 Sum_probs=143.3
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecC-----CCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQD-----NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~-----~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
||+.|.+||++|+++++++++.|+++.|.+ +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 899999999999999999999999999864 489999999999999999999999999999999999999999999
Q ss_pred CccccccCCCceeecCcCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 76 MFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 76 i~Hpnv~~~G~icl~~l~~--~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+|||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 81 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999987 79999999999999999999999999999999999999999999999999999864
No 13
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.1e-52 Score=299.67 Aligned_cols=150 Identities=33% Similarity=0.652 Sum_probs=145.2
Q ss_pred CChHHHHHHHHHHHHHhhC---CCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCc
Q 031856 1 MSTPAKKRLMRDFKRLQQD---PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~---~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~ 77 (152)
||+.|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 7888999999999999985 5789999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 78 Hpnv~-~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999 59999999999999999999999999999999999999999999999999999999999999999875
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-52 Score=301.15 Aligned_cols=149 Identities=36% Similarity=0.701 Sum_probs=145.4
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv 81 (152)
|+.+.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeecCcC----CCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 82 YADGSICLDILQ----NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~icl~~l~----~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++.
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 999999999998 899999999999999999999999999999999999999999999999999999875
No 15
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.8e-52 Score=298.06 Aligned_cols=146 Identities=39% Similarity=0.785 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccccCC
Q 031856 5 AKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
Q Consensus 5 a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~~~ 84 (152)
+.+||++|++++++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 85 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 85 G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++.
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999875
No 16
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=5e-52 Score=299.38 Aligned_cols=148 Identities=41% Similarity=0.818 Sum_probs=142.5
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEeecCC-----CcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccC
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM 76 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~-----n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i 76 (152)
|..|.+||++|++++++++++|+++.|.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 468999999999999999999999999765 999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCceeecCcCCC--CCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031856 77 FHPNIYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 77 ~Hpnv~~~G~icl~~l~~~--W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
|||||+.+|.||+++|... |+|+++|++||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999764 999999999999999999999999999999999999999999999999999875
No 17
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-52 Score=305.56 Aligned_cols=149 Identities=38% Similarity=0.708 Sum_probs=143.2
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
|++.+.+||++|+++|+++++.||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 106 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPN 106 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCc
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++| +|+++|.++|+++++++++
T Consensus 107 V~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~ 175 (179)
T 1i7k_A 107 VDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVT 175 (179)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC
T ss_pred cccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999 9999999999999999865
No 18
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4.8e-52 Score=299.23 Aligned_cols=151 Identities=40% Similarity=0.806 Sum_probs=145.0
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecC-----CCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQD-----NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~-----~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
|++.|.+||++|+++|+++++.|+++.+.. +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 888999999999999999999999999863 689999999999999999999999999999999999999999999
Q ss_pred CccccccCCCceeecCcCC--CCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031856 76 MFHPNIYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 76 i~Hpnv~~~G~icl~~l~~--~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
+|||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+++++++++
T Consensus 84 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 84 LFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred cccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999976 899999999999999999999999999999999999999999999999999998753
No 19
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.2e-52 Score=299.31 Aligned_cols=149 Identities=36% Similarity=0.746 Sum_probs=144.7
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccccc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~ 82 (152)
+.+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031856 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 83 ~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++.
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 84 RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999998764
No 20
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=9.6e-52 Score=307.23 Aligned_cols=150 Identities=33% Similarity=0.652 Sum_probs=143.8
Q ss_pred CChHHHHHHHHHHHHHhhC---CCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCc
Q 031856 1 MSTPAKKRLMRDFKRLQQD---PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~---~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~ 77 (152)
||+.|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 8999999999999999987 3689999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 78 Hpnv~-~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 155 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 155 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999 59999999999999999999999999999999999999999999999999999999999999999875
No 21
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=3e-52 Score=296.90 Aligned_cols=146 Identities=33% Similarity=0.701 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEeecCC-CcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccccC
Q 031856 5 AKKRLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA 83 (152)
Q Consensus 5 a~~Rl~~E~~~l~~~~~~g~~~~~~~~-n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~~ 83 (152)
|.+||++|++++++++++|+++.+.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 569999999999999999999999877 9999999999999999999999999999999999999999999999999997
Q ss_pred -CCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 84 -DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 84 -~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999998763
No 22
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.8e-52 Score=300.19 Aligned_cols=146 Identities=33% Similarity=0.662 Sum_probs=141.7
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
|++.|.+||++|+++|++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCCCceeecCcC--CCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHH
Q 031856 81 I-YADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQ 147 (152)
Q Consensus 81 v-~~~G~icl~~l~--~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~ 147 (152)
| +.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|+++|.++ +++|++
T Consensus 100 I~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp BCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9 799999999998 89999999999999999999999999999999999999999999999 999875
No 23
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=6.5e-51 Score=300.69 Aligned_cols=148 Identities=38% Similarity=0.736 Sum_probs=144.0
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccccc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~ 82 (152)
+.+.+||++|+++|+++++.||++.+.++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|++|||||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|++++++
T Consensus 127 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 127 SQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998763
No 24
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=2.1e-51 Score=307.55 Aligned_cols=150 Identities=35% Similarity=0.743 Sum_probs=145.4
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
+++.+.+||++|+++|++++++|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 20 ~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 99 (216)
T 2pwq_A 20 QGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPN 99 (216)
T ss_dssp CSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred ccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 81 IY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 81 v~-~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++.
T Consensus 100 I~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 100 ISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp BCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99 58999999999999999999999999999999999999999999999999999999999999999875
No 25
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-51 Score=301.97 Aligned_cols=148 Identities=35% Similarity=0.711 Sum_probs=140.4
Q ss_pred hHHHHHHHHHHHHHhhCCC-------------CCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCe
Q 031856 3 TPAKKRLMRDFKRLQQDPP-------------AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPT 69 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~-------------~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~ 69 (152)
+.+.+||++|+++|+++++ .||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 3578999999999999887 799999999999999999999999999999999999999999999999
Q ss_pred eeEeccCcccccc-CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHh
Q 031856 70 VRFVSRMFHPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQS 148 (152)
Q Consensus 70 i~f~t~i~Hpnv~-~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s 148 (152)
|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 111 V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~y 190 (193)
T 2f4z_A 111 MKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETF 190 (193)
T ss_dssp EEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence 9999999999999 689999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hh
Q 031856 149 WT 150 (152)
Q Consensus 149 ~~ 150 (152)
++
T Consensus 191 a~ 192 (193)
T 2f4z_A 191 AK 192 (193)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 26
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=4.7e-51 Score=299.44 Aligned_cols=149 Identities=38% Similarity=0.784 Sum_probs=143.3
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEe-ecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAGISGA-PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g~~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv 81 (152)
+.|.|||++|+++|+++++.|+++. +.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 6 ~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV 85 (183)
T 3rz3_A 6 PSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNI 85 (183)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCC
Confidence 5789999999999999999999999 678899999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHH------CHHHHHHHHH
Q 031856 82 YADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE------NKREYNRRVR 142 (152)
Q Consensus 82 ~~~G~icl~~l~-------------~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~------~~~~f~~~~~ 142 (152)
+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.||+.+|++ ++++|.++||
T Consensus 86 ~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~ 165 (183)
T 3rz3_A 86 YETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIR 165 (183)
T ss_dssp CTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred CCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHH
Confidence 999999999996 789999999999999999999999999999999999999 7899999999
Q ss_pred HHHHHhhhc
Q 031856 143 EIVEQSWTA 151 (152)
Q Consensus 143 ~~~~~s~~~ 151 (152)
++|++|+++
T Consensus 166 ~~v~~s~~~ 174 (183)
T 3rz3_A 166 KQVLGTKVD 174 (183)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=6.3e-51 Score=291.81 Aligned_cols=149 Identities=28% Similarity=0.679 Sum_probs=142.3
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEE-eecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISG-APQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~-~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
|..|.+||++|++++++++++|+++ .+.++|+++|+++|. |+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~m~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (155)
T 1wzv_A 2 SHMASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPN 80 (155)
T ss_dssp ---CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cchHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCc
Confidence 4458899999999999999999999 788999999999999 99999999999999999999999999999999999999
Q ss_pred ccCCCceeecCc-CCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031856 81 IYADGSICLDIL-QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 81 v~~~G~icl~~l-~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
|+.+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++++++.
T Consensus 81 V~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 81 VDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp BCTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999 89999999999999999999999999999999999999999999999999999998764
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.5e-50 Score=307.70 Aligned_cols=150 Identities=33% Similarity=0.652 Sum_probs=145.4
Q ss_pred CChHHHHHHHHHHHHHhhC---CCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCc
Q 031856 1 MSTPAKKRLMRDFKRLQQD---PPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~---~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~ 77 (152)
||+.|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 7889999999999999987 4789999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 78 HPNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 78 Hpnv~-~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.||+++|++|+++|.++||+|++++++
T Consensus 134 HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~ 207 (253)
T 3e46_A 134 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 207 (253)
T ss_dssp BTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_pred cCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999 59999999999999999999999999999999999999999999999999999999999999999875
No 29
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=3.7e-50 Score=292.09 Aligned_cols=150 Identities=26% Similarity=0.612 Sum_probs=141.1
Q ss_pred CChHHHHHHHHHHHHHhh-C-C------CC---CeEEee-cCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCC
Q 031856 1 MSTPAKKRLMRDFKRLQQ-D-P------PA---GISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPP 68 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~-~-~------~~---g~~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP 68 (152)
||+.+.+||++|++++++ + + +. ++.+.+ .++|+++|+++|.||+||||+||.|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 888999999999999998 5 3 33 467788 7899999999999999999999999999999999999999
Q ss_pred eeeEec-cCcccccc-CCCceeecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHH-CHHHHHHHHHHH
Q 031856 69 TVRFVS-RMFHPNIY-ADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSE-NKREYNRRVREI 144 (152)
Q Consensus 69 ~i~f~t-~i~Hpnv~-~~G~icl~~l~-~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~-~~~~f~~~~~~~ 144 (152)
+|+|.| +||||||+ .+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.||+++|++ |+++|.++||+|
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~ 162 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYF 162 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999 99999996 89999999998 899999999999999999999999999999999999999 999999999999
Q ss_pred HHHhhh
Q 031856 145 VEQSWT 150 (152)
Q Consensus 145 ~~~s~~ 150 (152)
+++++.
T Consensus 163 ~~~~~~ 168 (172)
T 2y9m_A 163 LAERER 168 (172)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 999864
No 30
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=9.4e-50 Score=288.86 Aligned_cols=147 Identities=24% Similarity=0.529 Sum_probs=140.6
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEee-cCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g~~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv 81 (152)
+.+.+||++|+++++++++.|+++.+ .++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 56889999999999999999999996 568899999998 9999999999999999999999999999999999999999
Q ss_pred cCCCceeecCcCC------CCCCcCCHHHHHHHHHHhhcC-CCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 82 YADGSICLDILQN------QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 82 ~~~G~icl~~l~~------~W~p~~~l~~il~~i~~~l~~-p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
+.+|.||+++|.. +|+|+++|.+||.+|+++|.+ |++++|+|.||+++|++|+++|.++||+|++++++
T Consensus 92 ~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 92 TETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999975 799999999999999999999 69999999999999999999999999999999864
No 31
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.2e-50 Score=293.21 Aligned_cols=143 Identities=38% Similarity=0.807 Sum_probs=110.5
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEeecC-CCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~~~~-~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
++.+.+||++|+++|+++++.||++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 35789999999999999999999999865 79999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcC-------------CCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHH-HHHHHHHHH
Q 031856 81 IYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKR-EYNRRVREI 144 (152)
Q Consensus 81 v~~~G~icl~~l~-------------~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~-~f~~~~~~~ 144 (152)
|+.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|.|||++|++|++ +|.++||+|
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999999996 689999999999999999999999999999999999999999 999999986
No 32
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-49 Score=286.43 Aligned_cols=144 Identities=28% Similarity=0.679 Sum_probs=138.1
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEe-ecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAGISGA-PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI 81 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g~~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv 81 (152)
+.|.+||++|++++ ++++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 46889999999999 568899998 7899999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031856 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 82 ~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++.+.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~~ 149 (160)
T 1y8x_A 82 DLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGY 149 (160)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSEE
T ss_pred CCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998653
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2e-50 Score=301.99 Aligned_cols=147 Identities=33% Similarity=0.694 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEeecCCC-cceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccccc
Q 031856 4 PAKKRLMRDFKRLQQDPPAGISGAPQDNN-IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 4 ~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n-~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~ 82 (152)
++.+||++|++++++++++||++.+.++| +++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999997764 56999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 83 A-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~-~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
. +|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++.
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~ 150 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 150 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 8 9999999999999999999999999999999999999999999999999999999999999999875
No 34
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-49 Score=289.51 Aligned_cols=145 Identities=28% Similarity=0.652 Sum_probs=139.2
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEe-ecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAGISGA-PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g~~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpn 80 (152)
++.+.+||++|++++ ++++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 467899999999999 578899998 7899999999998 999999999999999999999999999999999999999
Q ss_pred ccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031856 81 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 81 v~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
|+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++.+.
T Consensus 101 V~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~~ 169 (180)
T 2nvu_C 101 IDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGY 169 (180)
T ss_dssp BCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSEE
T ss_pred CCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998754
No 35
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=6e-50 Score=285.70 Aligned_cols=145 Identities=30% Similarity=0.679 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccccc-
Q 031856 4 PAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY- 82 (152)
Q Consensus 4 ~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~- 82 (152)
+|.+||++|++++++. |+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 4679999999999874 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeecCcCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhhc
Q 031856 83 ADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTA 151 (152)
Q Consensus 83 ~~G~icl~~l~~~W~p~~~l~~il~~-i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~~ 151 (152)
.+|.||+++|.++|+|+++|.+||.+ |+++|.+|++++|+|.+|+++|++|+++|.++||+++++++..
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 59999999999999999999999999 6899999999999999999999999999999999999998753
No 36
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-49 Score=289.73 Aligned_cols=146 Identities=32% Similarity=0.727 Sum_probs=137.2
Q ss_pred CCh--HHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcc
Q 031856 1 MST--PAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 1 Ms~--~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~H 78 (152)
||+ .|.+||++|+++++. +|+++.+. +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~H 95 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFH 95 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCcc
Confidence 554 489999999999985 48888887 678999999999999999999999999999999999999999999999
Q ss_pred ccccC-CCceeecCcCCCCCCcCCHHHHHHH-HHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 79 PNIYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 79 pnv~~-~G~icl~~l~~~W~p~~~l~~il~~-i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
|||+. +|.||+++|.++|+|+++|.+||.+ |+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++.
T Consensus 96 PNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 96 PNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 99998 9999999999999999999999999 999999999999999999999999999999999999999875
No 37
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.5e-49 Score=283.25 Aligned_cols=146 Identities=26% Similarity=0.716 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEee-cCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccccc
Q 031856 4 PAKKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 4 ~a~~Rl~~E~~~l~~~~~~g~~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~ 82 (152)
.|.+||++|+++++++++.|+++.+ .++|+++|+++|. |+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 3679999999999999999998655 6789999999997 9999999999999999999999999999999999999999
Q ss_pred CCCceeecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 83 ADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~~G~icl~~l~-~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
.+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||++++++++
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC--
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 99999999996 789999999999999999999999999999999999999999999999999998875
No 38
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=5.2e-48 Score=284.56 Aligned_cols=144 Identities=34% Similarity=0.685 Sum_probs=138.0
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEe----ecCCCcc---eEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAGISGA----PQDNNIM---LWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g~~~~----~~~~n~~---~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
+.|.+||++|+++++ +++|+++. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 578999999999998 67899998 8899999 9999995 888999999999999999999999999999999
Q ss_pred CccccccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhh
Q 031856 76 MFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 149 (152)
Q Consensus 76 i~Hpnv~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~ 149 (152)
+|||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|++.+.
T Consensus 105 i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred cccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997653
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-48 Score=281.89 Aligned_cols=143 Identities=31% Similarity=0.655 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccccc-
Q 031856 4 PAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY- 82 (152)
Q Consensus 4 ~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~- 82 (152)
++.+||++|++++++++. ++ +.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 578999999999999863 44 3588999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeecCcCCCCCCcCCHHHHHHHH-HHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 83 ADGSICLDILQNQWSPIYDVAAILTSI-QSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~~G~icl~~l~~~W~p~~~l~~il~~i-~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
.+|.||+++|.++|+|+++|.+||.+| +++|.+|++++|+|.+|+++|++|+++|.++||++++++++
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 599999999999999999999999997 79999999999999999999999999999999999999764
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.6e-47 Score=309.66 Aligned_cols=148 Identities=45% Similarity=0.896 Sum_probs=145.1
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccccc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~ 82 (152)
+.|.|||++|++++++++++|+++.|.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHhhh
Q 031856 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWT 150 (152)
Q Consensus 83 ~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~~s~~ 150 (152)
.+|.||+++|.++|+|++|+.+||.+|+++|.+|++++|+|.+|+++|++|+++|.++||+|+++++.
T Consensus 82 ~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~ 149 (399)
T 4ddg_A 82 SNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 149 (399)
T ss_dssp TTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred CCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999875
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=9e-48 Score=278.40 Aligned_cols=143 Identities=25% Similarity=0.577 Sum_probs=135.4
Q ss_pred CChHHHHHHHHHHHHHhhCC------------CCCeEEeecCCCcceEEEEEECCCCCCCC--CcEEEEEEEeCCCCCCC
Q 031856 1 MSTPAKKRLMRDFKRLQQDP------------PAGISGAPQDNNIMLWNAVIFGPDDTPWD--GGTFKLTLQFTEDYPNK 66 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~------------~~g~~~~~~~~n~~~w~~~i~gp~~tpy~--gg~f~~~i~fp~~yP~~ 66 (152)
||+.|.|||++|++++++++ +.|+++.+.++|+++|+++|.||+||||+ ||.|+++|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 88899999999999999977 77999999999999999999999999999 99999999999999999
Q ss_pred CCeeeEeccCccccccCCCceeecCcCCCCCCcCCHHHHH-HHHHHhhcC--CCCCCCcCHHHHHHHHHCHHHHHHHHHH
Q 031856 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCD--PNPNSPANSEAARLFSENKREYNRRVRE 143 (152)
Q Consensus 67 pP~i~f~t~i~Hpnv~~~G~icl~~l~~~W~p~~~l~~il-~~i~~~l~~--p~~~~~~n~ea~~~~~~~~~~f~~~~~~ 143 (152)
||+|+|.|++|||||+.+|.||+++|.++|+|++++.++| ..|++++.+ |++++|+|.||+++|++|+++|.++||+
T Consensus 85 pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp CCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred CCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 9999999999999999999999999999999999999975 467778775 8999999999999999999999999983
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2e-44 Score=257.87 Aligned_cols=130 Identities=25% Similarity=0.518 Sum_probs=120.1
Q ss_pred hHHHHHHHHHHHHHhhC-CCCCeEEeecC-C--CcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcc
Q 031856 3 TPAKKRLMRDFKRLQQD-PPAGISGAPQD-N--NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~-~~~g~~~~~~~-~--n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~H 78 (152)
..+.+||++|+++++++ ++.|+++.+.. + |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 99 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEM 99 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccccc
Confidence 46789999999999998 78899999853 3 59999999999999999999999999999999999999999999999
Q ss_pred ccccCCCce---eecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHC
Q 031856 79 PNIYADGSI---CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSEN 133 (152)
Q Consensus 79 pnv~~~G~i---cl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~ 133 (152)
|||+.+|.| |+++|. +|+|+++|++||.+|+++|.+|++++++|++|+++|++|
T Consensus 100 PNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 100 SCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp TTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 999999999 888887 599999999999999999999999999999999998765
No 43
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-43 Score=244.95 Aligned_cols=118 Identities=29% Similarity=0.634 Sum_probs=106.5
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccC-ccc
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHP 79 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i-~Hp 79 (152)
|+ .|.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++ |||
T Consensus 4 m~-~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 82 (125)
T 2fo3_A 4 MG-NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHT 82 (125)
T ss_dssp ------CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBT
T ss_pred ch-HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCC
Confidence 43 4789999999999999999999999999999999999999999999999999999999999999999999996 999
Q ss_pred cccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCCC
Q 031856 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119 (152)
Q Consensus 80 nv~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~ 119 (152)
||+.+|.||+++|.++|+|++++++||.+|+++|.+|+.+
T Consensus 83 nv~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 83 HVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred cCCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999999999999999875
No 44
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=2.4e-43 Score=276.24 Aligned_cols=149 Identities=30% Similarity=0.595 Sum_probs=138.7
Q ss_pred CChHHHHHHHHHHHHHhhCCCCC----eEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc-
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAG----ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR- 75 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g----~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~- 75 (152)
||+.+.+||++|+++|+++++.| +.+.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~ 152 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTG 152 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCST
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccC
Confidence 67889999999999999987764 5577789999999999999999999999999999999999999999999998
Q ss_pred ----CccccccCCCceeecCcC-------CCCCCcC-CHHHHHHHHHHhhc--CCCCCCCcCHHH--HHHHHHCHHHHHH
Q 031856 76 ----MFHPNIYADGSICLDILQ-------NQWSPIY-DVAAILTSIQSLLC--DPNPNSPANSEA--ARLFSENKREYNR 139 (152)
Q Consensus 76 ----i~Hpnv~~~G~icl~~l~-------~~W~p~~-~l~~il~~i~~~l~--~p~~~~~~n~ea--~~~~~~~~~~f~~ 139 (152)
+|||||+.+|.||+++|. ++|+|++ +|.+||.+|+++|. +|++++|+|.++ +.+|.+|+++|.+
T Consensus 153 g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~ 232 (323)
T 3ceg_A 153 GHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDG 232 (323)
T ss_dssp TTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHH
T ss_pred CCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHH
Confidence 999999999999999997 6899999 89999999999996 677799999987 6899999999999
Q ss_pred HHHHHHHHhh
Q 031856 140 RVREIVEQSW 149 (152)
Q Consensus 140 ~~~~~~~~s~ 149 (152)
+||+++.+++
T Consensus 233 ~vr~~t~k~A 242 (323)
T 3ceg_A 233 NIRQATVKWA 242 (323)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 45
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.6e-42 Score=243.17 Aligned_cols=115 Identities=26% Similarity=0.622 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccC-cccccc
Q 031856 4 PAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIY 82 (152)
Q Consensus 4 ~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i-~Hpnv~ 82 (152)
.|.+||++|+++++++++.|+++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++ |||||+
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 99 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVY 99 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999996 999999
Q ss_pred CCCceeecCcCCCCCCcCCHHHHHHHHHHhhcCCCC
Q 031856 83 ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 118 (152)
Q Consensus 83 ~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~~p~~ 118 (152)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|+.
T Consensus 100 ~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 100 SNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 999999999999999999999999999999999875
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=7.6e-43 Score=250.31 Aligned_cols=126 Identities=23% Similarity=0.524 Sum_probs=117.6
Q ss_pred ChHHHHHHHHHHHHHhhCCCCC-eEEee-cCCC--cceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCc
Q 031856 2 STPAKKRLMRDFKRLQQDPPAG-ISGAP-QDNN--IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF 77 (152)
Q Consensus 2 s~~a~~Rl~~E~~~l~~~~~~g-~~~~~-~~~n--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~ 77 (152)
...+.+||++|++++++++++| +++.+ .++| +++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 23 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 102 (160)
T 2a4d_A 23 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 102 (160)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred echHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCce
Confidence 3578899999999999998888 77877 4554 899999999999999999999999999999999999999999999
Q ss_pred ccccc-CCCceeecCcC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCcCHHHH
Q 031856 78 HPNIY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPNSPANSEAA 127 (152)
Q Consensus 78 Hpnv~-~~G~icl~~l~--~~W~p~~~l~~il~~i~~~l~-~p~~~~~~n~ea~ 127 (152)
||||+ .+|.||+++|. ++|+|+++|++||.+|+++|. +|++++|+|.|||
T Consensus 103 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 103 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp CTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred eCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 99999 79999999997 899999999999999999995 7999999999987
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=5.8e-44 Score=251.08 Aligned_cols=129 Identities=22% Similarity=0.547 Sum_probs=116.0
Q ss_pred CCh-HHHHHHHHHHHHHhhC-CCCCeEEeecC-C--CcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031856 1 MST-PAKKRLMRDFKRLQQD-PPAGISGAPQD-N--NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 1 Ms~-~a~~Rl~~E~~~l~~~-~~~g~~~~~~~-~--n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
||+ .+.+||++|+++++++ ++.|+++.+.. + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 674 5679999999999998 78899999843 3 48999999999999999999999999999999999999999999
Q ss_pred CccccccCC-Cce--eecCcCCCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHH
Q 031856 76 MFHPNIYAD-GSI--CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLF 130 (152)
Q Consensus 76 i~Hpnv~~~-G~i--cl~~l~~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~ 130 (152)
+|||||+.+ |.| |++++. +|+|++++++||.+|+++|.+|++++++|++|+++|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999986 999 898886 899999999999999999999999999999988654
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.3e-42 Score=240.67 Aligned_cols=113 Identities=36% Similarity=0.723 Sum_probs=107.6
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEe--ecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCc-
Q 031856 1 MSTPAKKRLMRDFKRLQQDPPAGISGA--PQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMF- 77 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~~~g~~~~--~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~- 77 (152)
||+.+ +||++|++++++++++|+++. +.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~-~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~ 98 (136)
T 2a7l_A 20 MASMQ-KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIP 98 (136)
T ss_dssp GTTSC-HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCC
T ss_pred ccHHH-HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcC
Confidence 66544 999999999999999999965 78999999999999999999999999999999999999999999999999
Q ss_pred -cccccCCCceeecCcCCCCCCcCCHHHHHHHHHHhhc
Q 031856 78 -HPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 114 (152)
Q Consensus 78 -Hpnv~~~G~icl~~l~~~W~p~~~l~~il~~i~~~l~ 114 (152)
||||+.+|.||+++|.++|+|+++|++||.+|+++|.
T Consensus 99 ~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 99 VHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999874
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=248.76 Aligned_cols=125 Identities=23% Similarity=0.528 Sum_probs=116.5
Q ss_pred hHHHHHHHHHHHHHhhCCCCC-eEEee-cCCC--cceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAG-ISGAP-QDNN--IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g-~~~~~-~~~n--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~H 78 (152)
..+.+||++|++++++++++| +++.+ .++| +++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 457899999999999998888 67776 4554 8999999999999999999999999999999999999999999999
Q ss_pred cccc-CCCceeecCcC--CCCCCcCCHHHHHHHHHHhhc-CCCCCCCcCHHHH
Q 031856 79 PNIY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPNSPANSEAA 127 (152)
Q Consensus 79 pnv~-~~G~icl~~l~--~~W~p~~~l~~il~~i~~~l~-~p~~~~~~n~ea~ 127 (152)
|||+ .+|.||+++|. ++|+|+++|++||.+|+++|. +|++++|+|.|||
T Consensus 114 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 9999 79999999997 899999999999999999997 5999999999987
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=4.9e-42 Score=251.81 Aligned_cols=142 Identities=22% Similarity=0.448 Sum_probs=129.5
Q ss_pred CChHHHHHHHHHHHHHhhCC---CCCeEEeecCCCcceEEEEEECC-CCCCCCC-----------cEEEEEEEeCCCCCC
Q 031856 1 MSTPAKKRLMRDFKRLQQDP---PAGISGAPQDNNIMLWNAVIFGP-DDTPWDG-----------GTFKLTLQFTEDYPN 65 (152)
Q Consensus 1 Ms~~a~~Rl~~E~~~l~~~~---~~g~~~~~~~~n~~~w~~~i~gp-~~tpy~g-----------g~f~~~i~fp~~yP~ 65 (152)
||+.|.+||++|+++|++++ +.|+++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||+
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~ 103 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPF 103 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCC
Confidence 78899999999999999988 68899999999999999999998 8999998 899999999999999
Q ss_pred CCCeeeEeccCccc-cccCCCceeecCcC-CCCCCcCCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHH
Q 031856 66 KPPTVRFVSRMFHP-NIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVRE 143 (152)
Q Consensus 66 ~pP~i~f~t~i~Hp-nv~~~G~icl~~l~-~~W~p~~~l~~il~~i~~~l~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~ 143 (152)
+||+|+|.|++||| ||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++.. .|+.++.+|.+++++
T Consensus 104 ~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~ 175 (186)
T 1zuo_A 104 DPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQ 175 (186)
T ss_dssp SCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHH
T ss_pred CCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHH
Confidence 99999999999999 69999999999997 789999999999999999999986543 344567788888888
Q ss_pred HHHHhhh
Q 031856 144 IVEQSWT 150 (152)
Q Consensus 144 ~~~~s~~ 150 (152)
++.+++.
T Consensus 176 ~~~~~~~ 182 (186)
T 1zuo_A 176 QSYNSIV 182 (186)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887753
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.6e-39 Score=236.87 Aligned_cols=117 Identities=32% Similarity=0.709 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcccccc
Q 031856 3 TPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 82 (152)
Q Consensus 3 ~~a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~ 82 (152)
+.+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+ ||||+
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~ 90 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFK 90 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceec
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CCCceeecCc---CCCCCCcCCHHHHHHHHHHhhcCCCCCCC
Q 031856 83 ADGSICLDIL---QNQWSPIYDVAAILTSIQSLLCDPNPNSP 121 (152)
Q Consensus 83 ~~G~icl~~l---~~~W~p~~~l~~il~~i~~~l~~p~~~~~ 121 (152)
.+|.||+++| .++|+|+++|.+||.+|+++|.+|+++..
T Consensus 91 ~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 91 CNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp TTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred cCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 9999999999 68999999999999999999999988643
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.96 E-value=1.9e-30 Score=184.12 Aligned_cols=101 Identities=21% Similarity=0.377 Sum_probs=93.4
Q ss_pred CChHH--------HHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCc----------EEEEEEEeCCC
Q 031856 1 MSTPA--------KKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG----------TFKLTLQFTED 62 (152)
Q Consensus 1 Ms~~a--------~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~ 62 (152)
||+.| .+||++|++.|++ ++.+..+|+..|..++.||+||+|+|| .|++++.||++
T Consensus 21 m~t~a~p~~~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~ 94 (172)
T 2z6o_A 21 LKTNAGPRDRELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPIT 94 (172)
T ss_dssp CCCCCCTTCTHHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTT
T ss_pred cccccCCCccHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCC
Confidence 67777 9999999999998 577888999999999999999999999 99999999999
Q ss_pred CCCCCCeeeEecc-CccccccCCCceeecCcC-C---CCCCcCCHHHHHH
Q 031856 63 YPNKPPTVRFVSR-MFHPNIYADGSICLDILQ-N---QWSPIYDVAAILT 107 (152)
Q Consensus 63 yP~~pP~i~f~t~-i~Hpnv~~~G~icl~~l~-~---~W~p~~~l~~il~ 107 (152)
||.+||+|+|.+. +|||||+.+|+||++++. . .|+|.++|.++|.
T Consensus 95 YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 95 YPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 9999999999998 999999999999999994 3 4569999999983
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.84 E-value=1.1e-20 Score=135.04 Aligned_cols=114 Identities=21% Similarity=0.336 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHhhCCCC---CeEEeecCCCcceEEEEEECCCCCCCCCcE---EEEEEEeCCCCCCCCCeeeEecc----
Q 031856 6 KKRLMRDFKRLQQDPPA---GISGAPQDNNIMLWNAVIFGPDDTPWDGGT---FKLTLQFTEDYPNKPPTVRFVSR---- 75 (152)
Q Consensus 6 ~~Rl~~E~~~l~~~~~~---g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~---f~~~i~fp~~yP~~pP~i~f~t~---- 75 (152)
.+|..+|..++.+.-+. ...+...+|....+-+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 46677788777664331 222334566666677777777678999998 88999999999999999988651
Q ss_pred ------Cc-cccccCCCceeecCcCCCCCC-cCCHHHHHHHHHHhhcCCCCCC
Q 031856 76 ------MF-HPNIYADGSICLDILQNQWSP-IYDVAAILTSIQSLLCDPNPNS 120 (152)
Q Consensus 76 ------i~-Hpnv~~~G~icl~~l~~~W~p-~~~l~~il~~i~~~l~~p~~~~ 120 (152)
|+ ||||+.+|+||++.|. +|++ +.++.++|.+|+++|.+|+++.
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 9999999999999995 6999 5899999999999999999874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.79 E-value=7e-21 Score=132.31 Aligned_cols=95 Identities=21% Similarity=0.489 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCc----------EEEEEEEeCCCCCCCCCeeeEecc
Q 031856 6 KKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG----------TFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 6 ~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
..||++||..|-+ +++....+-..|...+.||+||+|.|+ .|++++.||.+||.+||.|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 5799999999987 566667777889999999999999999 999999999999999999999995
Q ss_pred -CccccccCCCceeecCcC-CCC---CCcCCHHHHH
Q 031856 76 -MFHPNIYADGSICLDILQ-NQW---SPIYDVAAIL 106 (152)
Q Consensus 76 -i~Hpnv~~~G~icl~~l~-~~W---~p~~~l~~il 106 (152)
.+|||++.+|+||++++. .-| .|.++|...|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 899999999999999872 112 2345566554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.59 E-value=3.1e-15 Score=105.03 Aligned_cols=101 Identities=21% Similarity=0.365 Sum_probs=79.5
Q ss_pred HHHHHHHHhhCCCC-CeEEe---ecCCCcceEEEEEECCCCCCCCCcEEE--EEEEeCCCCCCCCCeeeEecc------C
Q 031856 9 LMRDFKRLQQDPPA-GISGA---PQDNNIMLWNAVIFGPDDTPWDGGTFK--LTLQFTEDYPNKPPTVRFVSR------M 76 (152)
Q Consensus 9 l~~E~~~l~~~~~~-g~~~~---~~~~n~~~w~~~i~gp~~tpy~gg~f~--~~i~fp~~yP~~pP~i~f~t~------i 76 (152)
..+|...+.+.-+. ..... ....+++.|.++|. .+|+|+.|. +.|.||++||++||.+ |.++ .
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 34566666554322 11111 23468899999995 579999988 4999999999999999 7766 5
Q ss_pred ccccccCCCceeecCcCCCCCC-cCCHHHHHHHHHHhhcC
Q 031856 77 FHPNIYADGSICLDILQNQWSP-IYDVAAILTSIQSLLCD 115 (152)
Q Consensus 77 ~Hpnv~~~G~icl~~l~~~W~p-~~~l~~il~~i~~~l~~ 115 (152)
+||||+.+|+||++.|.+ |++ ..+|.+++..+++.|.+
T Consensus 100 ~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 100 TGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCEecccccc-cCCCCCCHHHHHHHHHHHHhh
Confidence 899999999999999965 988 68999999999999863
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.78 E-value=0.012 Score=39.39 Aligned_cols=67 Identities=13% Similarity=0.222 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEec
Q 031856 6 KKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 6 ~~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t 74 (152)
..+...|+..|..--+..+.+. .+....+.+.|....|..-..-.+.+.|.+|++||.+||.|.+.+
T Consensus 12 ~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 12 GEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4556778888876434445443 222355555553222222234478899999999999999998765
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.08 E-value=0.068 Score=35.66 Aligned_cols=68 Identities=13% Similarity=0.122 Sum_probs=41.7
Q ss_pred HHHHHHHHHhhCCCCCeEEeecC--CCcceEEEEEECCCCCCC--CCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031856 8 RLMRDFKRLQQDPPAGISGAPQD--NNIMLWNAVIFGPDDTPW--DGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 8 Rl~~E~~~l~~~~~~g~~~~~~~--~n~~~w~~~i~gp~~tpy--~gg~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
+...|+..|..--+..+.+.... .....+.+.+..+.+..- ..-.+.+.|.+|++||..+|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 46678887776444455544322 234445555532222111 124788999999999999999988763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.16 Score=34.28 Aligned_cols=67 Identities=10% Similarity=0.208 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEeecC------CCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEec
Q 031856 7 KRLMRDFKRLQQDPPAGISGAPQD------NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 7 ~Rl~~E~~~l~~~~~~g~~~~~~~------~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t 74 (152)
.+-..|+..|..--+..+.+.... .....+.+.|....+ .-..-.+.+.+.+|++||..||.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 13 EIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 345667777776433344332111 124566777753322 2123478899999999999999998765
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.56 E-value=0.16 Score=36.57 Aligned_cols=84 Identities=15% Similarity=0.220 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCccccccCCCc
Q 031856 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGS 86 (152)
Q Consensus 7 ~Rl~~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~Hpnv~~~G~ 86 (152)
.+|.+|+.++-=+ .+...++++....+.+....| ....+.|.++.+||.++|.+...-|. |.
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D~~g-----R~H~l~v~l~~~yp~~~P~~~~DlP~--~~------ 65 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAEDASG-----REHLITLKLKAKYPAESPDYFVDFPV--PF------ 65 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEECTTS-----CEEEEEEECCTTTTTSCCEEECCCSS--CC------
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEeCCC-----CeEEEEEEECCCCCCCCCeeEEcCCC--Cc------
Confidence 3577787777322 133335678888888875554 68999999999999999987655443 11
Q ss_pred eeecCcCCCCCCcCCHHHHHHHHHHhhc
Q 031856 87 ICLDILQNQWSPIYDVAAILTSIQSLLC 114 (152)
Q Consensus 87 icl~~l~~~W~p~~~l~~il~~i~~~l~ 114 (152)
.-.|.+..++.+++...+..+.
T Consensus 66 ------~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 66 ------CASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHHHH
T ss_pred ------ccccCCCccHHHHHHHHHHHHH
Confidence 1369999999888877765543
No 60
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.37 E-value=0.22 Score=34.43 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=21.6
Q ss_pred EEEEEEEeCCCCCCCCCeeeEecc
Q 031856 52 TFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 52 ~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987663
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.48 E-value=0.55 Score=31.42 Aligned_cols=68 Identities=15% Similarity=0.197 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhhCCCCCeEEeecCC-----CcceEEEEEECCCCC--CCCCcEEEEEEEeCCCCCCCCCeeeEec
Q 031856 6 KKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDT--PWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 6 ~~Rl~~E~~~l~~~~~~g~~~~~~~~-----n~~~w~~~i~gp~~t--py~gg~f~~~i~fp~~yP~~pP~i~f~t 74 (152)
..+...|+..|..--+..+.+..... ......+.+. +.+. .-..-.+.+.|.||++||..+|.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 34556788777764334444332111 1345555653 3221 0112468899999999999999998754
No 62
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.30 E-value=0.17 Score=33.71 Aligned_cols=66 Identities=9% Similarity=0.033 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhCCC--CCeEEee-cCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEec
Q 031856 8 RLMRDFKRLQQDPP--AGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS 74 (152)
Q Consensus 8 Rl~~E~~~l~~~~~--~g~~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t 74 (152)
....|+..|..--+ ..+.+.. ...+...+.+.+..... .-..-.+.+.+.+|.+||..||.|.+.+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGF-MDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTT-TTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCC-CCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 45567777765221 1333221 12234567777743221 1112478999999999999999987553
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.42 E-value=0.16 Score=34.92 Aligned_cols=25 Identities=24% Similarity=0.357 Sum_probs=21.7
Q ss_pred cEEEEEEEeCCCCCCCCCeeeEecc
Q 031856 51 GTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 51 g~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
-.+.+.|.+|.+||..||.|...+.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987764
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=86.55 E-value=0.6 Score=21.67 Aligned_cols=21 Identities=29% Similarity=0.676 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCe
Q 031856 4 PAKKRLMRDFKRLQQDPPAGI 24 (152)
Q Consensus 4 ~a~~Rl~~E~~~l~~~~~~g~ 24 (152)
+.+.||+-|+..++.+||+|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 467899999999999999874
No 65
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=76.24 E-value=0.53 Score=30.80 Aligned_cols=33 Identities=9% Similarity=-0.061 Sum_probs=0.0
Q ss_pred cCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHH
Q 031856 114 CDPNPNSPANSEAARLFSENKREYNRRVREIVE 146 (152)
Q Consensus 114 ~~p~~~~~~n~ea~~~~~~~~~~f~~~~~~~~~ 146 (152)
.-.....|.+.+.|++|+++++.|.+.|+.|..
T Consensus 19 ~~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~ 51 (108)
T 2cwb_A 19 KGETTTEAVDAATAEKVFKQYANDNGVDGEWTY 51 (108)
T ss_dssp ---------------------------------
T ss_pred cCcccCCchhHHHHHHHHhchhccccccccccc
Confidence 344456789999999999999999999999983
No 66
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=70.38 E-value=6.5 Score=32.38 Aligned_cols=29 Identities=24% Similarity=0.274 Sum_probs=24.8
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhcC
Q 031856 124 SEAARLFSENKREYNRRVREIVEQSWTAD 152 (152)
Q Consensus 124 ~ea~~~~~~~~~~f~~~~~~~~~~s~~~~ 152 (152)
.|+.++..+|+++|.++|++++.++.+.|
T Consensus 278 ee~~~l~~~dp~~~~~~~~~Sm~rhv~am 306 (552)
T 2fkn_A 278 DEADRLRQDTPELYVRLAKQSMKKHVEAM 306 (552)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 46788888999999999999999887653
No 67
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=69.69 E-value=6.9 Score=32.24 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=24.8
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhcC
Q 031856 124 SEAARLFSENKREYNRRVREIVEQSWTAD 152 (152)
Q Consensus 124 ~ea~~~~~~~~~~f~~~~~~~~~~s~~~~ 152 (152)
.|+.++..+|+++|.++|++++.++.+.|
T Consensus 277 ee~~~l~~~dp~~~~~~~~~Sm~rhv~am 305 (551)
T 1x87_A 277 DEAAELRARDPKQYIARAKQSIAAHVRAM 305 (551)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 47788888999999999999999887653
No 68
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=69.51 E-value=7.1 Score=32.22 Aligned_cols=29 Identities=3% Similarity=-0.086 Sum_probs=24.8
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhhhcC
Q 031856 124 SEAARLFSENKREYNRRVREIVEQSWTAD 152 (152)
Q Consensus 124 ~ea~~~~~~~~~~f~~~~~~~~~~s~~~~ 152 (152)
.|+.++..+|+++|.++|++++.++.+.|
T Consensus 282 ee~~~l~~~dp~~~~~~~~~Sm~rhv~Am 310 (557)
T 1uwk_A 282 EQYRDRAQTEPAAVVKAAKQSMAVHVQAM 310 (557)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 46788888999999999999999887653
No 69
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=40.50 E-value=78 Score=22.20 Aligned_cols=46 Identities=22% Similarity=0.450 Sum_probs=32.9
Q ss_pred CCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEeccCcc
Q 031856 31 NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 31 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~t~i~H 78 (152)
+.-..|.+.+.|+.|.-...-+=++...+.+.||. |...+..+.|.
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPFe 75 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPFE 75 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSEE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCCE
Confidence 45678999999987754444455788888899874 66666665443
No 70
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=38.08 E-value=29 Score=25.01 Aligned_cols=27 Identities=11% Similarity=0.346 Sum_probs=22.7
Q ss_pred CCCcEEEEEEEeCCCCCC-----CCCeeeEec
Q 031856 48 WDGGTFKLTLQFTEDYPN-----KPPTVRFVS 74 (152)
Q Consensus 48 y~gg~f~~~i~fp~~yP~-----~pP~i~f~t 74 (152)
-+.|.|.|.-.+|--||. .||.|.|.-
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 345899999999999998 789988863
No 71
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=34.05 E-value=13 Score=17.14 Aligned_cols=17 Identities=35% Similarity=0.647 Sum_probs=9.6
Q ss_pred CCCCCeeeEeccCcccc
Q 031856 64 PNKPPTVRFVSRMFHPN 80 (152)
Q Consensus 64 P~~pP~i~f~t~i~Hpn 80 (152)
|+.-|.-.|..+.|||-
T Consensus 4 pmtlpenyfserpyhpp 20 (26)
T 2jrw_A 4 PMTLPENYFSERPYHPP 20 (26)
T ss_dssp CCCCSSSSCCSSSCCSC
T ss_pred ccccchhhcccCCCCCC
Confidence 34445555666667763
No 72
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=30.67 E-value=1.2e+02 Score=20.35 Aligned_cols=44 Identities=14% Similarity=0.304 Sum_probs=31.9
Q ss_pred cceEE--EEEECCCCCCCCC-cEEEEEEEeCCCCCCCCCeeeEeccCcc
Q 031856 33 IMLWN--AVIFGPDDTPWDG-GTFKLTLQFTEDYPNKPPTVRFVSRMFH 78 (152)
Q Consensus 33 ~~~w~--~~i~gp~~tpy~g-g~f~~~i~fp~~yP~~pP~i~f~t~i~H 78 (152)
+..|. +.+.|+.|..... -+=++...+.+.|+ .|...+..+.|.
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF~ 78 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPFR 78 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTCC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCcE
Confidence 36898 8889999876643 44467777888877 487777776553
No 73
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=29.02 E-value=1e+02 Score=21.33 Aligned_cols=39 Identities=15% Similarity=0.255 Sum_probs=28.8
Q ss_pred CCcceEEEEEECCCCC-------------CCCCcEEEEEEEeCCCCCCCCCe
Q 031856 31 NNIMLWNAVIFGPDDT-------------PWDGGTFKLTLQFTEDYPNKPPT 69 (152)
Q Consensus 31 ~n~~~w~~~i~gp~~t-------------py~gg~f~~~i~fp~~yP~~pP~ 69 (152)
.+..+|.++..|..++ |-.-|.++|.+.-+.--|.+-|.
T Consensus 35 ~~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 35 KSDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SSCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 3445899999887654 67779999998887666666555
No 74
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=27.70 E-value=64 Score=18.46 Aligned_cols=20 Identities=10% Similarity=0.263 Sum_probs=17.9
Q ss_pred cCHHHHHHHHHCHHHHHHHH
Q 031856 122 ANSEAARLFSENKREYNRRV 141 (152)
Q Consensus 122 ~n~ea~~~~~~~~~~f~~~~ 141 (152)
.|++...+..+|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 68999999999999998865
No 75
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=26.44 E-value=1.4e+02 Score=19.52 Aligned_cols=29 Identities=7% Similarity=0.071 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEeecCCCc
Q 031856 5 AKKRLMRDFKRLQQDPPAGISGAPQDNNI 33 (152)
Q Consensus 5 a~~Rl~~E~~~l~~~~~~g~~~~~~~~n~ 33 (152)
..+.|..||.++.+.++..++++..+...
T Consensus 32 lS~~Lid~La~i~~~~~e~fTle~i~s~~ 60 (122)
T 1u9d_A 32 LVPTLLNELSSLLSTARNAFTFELINTQY 60 (122)
T ss_dssp HHHHHHHHHHHHHTCCGGGCEEEECCCCC
T ss_pred HhHHHHHHHHHHHCCCcccEEEEEeeeEE
Confidence 35678889999999999999988765443
No 76
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=26.35 E-value=39 Score=22.81 Aligned_cols=68 Identities=18% Similarity=0.284 Sum_probs=40.8
Q ss_pred HHHHHHhhCCCCCeEEeecCCCcceEEEEEECCCCCCCCCcEEEEEEEeCCCCCCCCCeeeEe---ccCccccccCCCce
Q 031856 11 RDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV---SRMFHPNIYADGSI 87 (152)
Q Consensus 11 ~E~~~l~~~~~~g~~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~yP~~pP~i~f~---t~i~Hpnv~~~G~i 87 (152)
+++++....-+.|+.+....++ -..++...+ .| ..+ -..||.|.|. +.--|++|..+|.+
T Consensus 5 ~~fr~a~~~~p~~V~vVTt~~~-g~~~g~t~s---------~~-~sv------s~~PP~v~v~i~~~~~t~~~i~~~~~F 67 (157)
T 3pft_A 5 TSLREAFGHFPSGVIAIAAEVD-GTRVGLAAS---------TF-VPV------SLEPPLVAFAVQNSSTTWPKLKDLPSL 67 (157)
T ss_dssp HHHHHHHHTSCBCCEEEEEEET-TEEEEEEES---------CC-EEE------ETTTTEEEEEEETTCSSHHHHTTSSCE
T ss_pred HHHHHHHHhCCCceEEEEEeeC-CEEEEEEee---------eE-eEE------ECCCcEEEEEECCCCchHHHHHhCCEE
Confidence 4567777777778876643321 112222210 01 112 1368888775 34668999999999
Q ss_pred eecCcCCC
Q 031856 88 CLDILQNQ 95 (152)
Q Consensus 88 cl~~l~~~ 95 (152)
|+++|.++
T Consensus 68 ~Vnvl~~~ 75 (157)
T 3pft_A 68 GISVLGEA 75 (157)
T ss_dssp EEEECBTT
T ss_pred EEEECCHH
Confidence 99998643
No 77
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=25.36 E-value=65 Score=19.13 Aligned_cols=22 Identities=9% Similarity=0.231 Sum_probs=19.3
Q ss_pred CcCHHHHHHHHHCHHHHHHHHH
Q 031856 121 PANSEAARLFSENKREYNRRVR 142 (152)
Q Consensus 121 ~~n~ea~~~~~~~~~~f~~~~~ 142 (152)
-.|++.+++..+|.++|.+...
T Consensus 38 ~~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 38 RENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TTCHHHHHHHHTTHHHHHHHHH
T ss_pred hHCHHHHHHHHHCHHHHHHHHc
Confidence 3789999999999999998764
No 78
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=23.53 E-value=41 Score=24.82 Aligned_cols=26 Identities=23% Similarity=0.473 Sum_probs=22.0
Q ss_pred CCcEEEEEEEeCCCCC-------CCCCeeeEec
Q 031856 49 DGGTFKLTLQFTEDYP-------NKPPTVRFVS 74 (152)
Q Consensus 49 ~gg~f~~~i~fp~~yP-------~~pP~i~f~t 74 (152)
+.|.|.|.-.+|--|| ..||.|.|.-
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 4589999999999998 4789998863
No 79
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=22.73 E-value=1.2e+02 Score=18.87 Aligned_cols=26 Identities=19% Similarity=0.420 Sum_probs=20.0
Q ss_pred CCcEEEEEEEeCCCCCCCCCeeeEecc
Q 031856 49 DGGTFKLTLQFTEDYPNKPPTVRFVSR 75 (152)
Q Consensus 49 ~gg~f~~~i~fp~~yP~~pP~i~f~t~ 75 (152)
.+..+...|.|+..|+ .+|+|.+.-.
T Consensus 27 g~R~~~~~V~F~~~F~-~~P~V~v~l~ 52 (101)
T 2ccv_A 27 NTRELAKNITFASPYC-RPPVVLLSIT 52 (101)
T ss_dssp SCEEEEEEEECSSCCS-SCCEEEEEEE
T ss_pred cceEEEEEeEeCcccC-CCCEEEEEeE
Confidence 3346788899999998 5899877643
No 80
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=22.26 E-value=1.5e+02 Score=20.25 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=24.4
Q ss_pred CCcceEEEEEECCCCC-------------CCCCcEEEEEEEeCCCCCC
Q 031856 31 NNIMLWNAVIFGPDDT-------------PWDGGTFKLTLQFTEDYPN 65 (152)
Q Consensus 31 ~n~~~w~~~i~gp~~t-------------py~gg~f~~~i~fp~~yP~ 65 (152)
.+..+|.++..|...+ |-.-|.++|.+.-+.-.|.
T Consensus 36 ~~dlewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpPd~~ 83 (155)
T 1roc_A 36 KHDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAE 83 (155)
T ss_dssp SSCEEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCCCGG
T ss_pred CCCcEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCCCCcc
Confidence 3447899998887653 5667888888777653333
No 81
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=21.81 E-value=47 Score=25.56 Aligned_cols=24 Identities=21% Similarity=0.504 Sum_probs=20.5
Q ss_pred CcEEEEEEEeCCCCC------------------CCCCeeeEe
Q 031856 50 GGTFKLTLQFTEDYP------------------NKPPTVRFV 73 (152)
Q Consensus 50 gg~f~~~i~fp~~yP------------------~~pP~i~f~ 73 (152)
.|.|.|.-.+|--|| ..||.|.|.
T Consensus 188 ~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 188 NGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 488999999999998 568888886
No 82
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=21.58 E-value=47 Score=25.50 Aligned_cols=24 Identities=21% Similarity=0.512 Sum_probs=20.7
Q ss_pred CcEEEEEEEeCCCCC------------------CCCCeeeEe
Q 031856 50 GGTFKLTLQFTEDYP------------------NKPPTVRFV 73 (152)
Q Consensus 50 gg~f~~~i~fp~~yP------------------~~pP~i~f~ 73 (152)
.|.|.|.-.+|--|| ..||.|.|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 488999999999998 468999886
No 83
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=21.52 E-value=48 Score=25.20 Aligned_cols=25 Identities=24% Similarity=0.607 Sum_probs=21.1
Q ss_pred CCcEEEEEEEeCCCCCC------------------CCCeeeEe
Q 031856 49 DGGTFKLTLQFTEDYPN------------------KPPTVRFV 73 (152)
Q Consensus 49 ~gg~f~~~i~fp~~yP~------------------~pP~i~f~ 73 (152)
+.|.|.|.-.+|--||. .||.|.|.
T Consensus 180 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 180 NDGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 34899999999999993 68999886
No 84
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=21.45 E-value=48 Score=25.23 Aligned_cols=25 Identities=16% Similarity=0.393 Sum_probs=21.2
Q ss_pred CCcEEEEEEEeCCCCC------------------CCCCeeeEe
Q 031856 49 DGGTFKLTLQFTEDYP------------------NKPPTVRFV 73 (152)
Q Consensus 49 ~gg~f~~~i~fp~~yP------------------~~pP~i~f~ 73 (152)
+.|.|.|.-.+|--|| ..||.|.|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 4588999999999998 458999886
No 85
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=21.35 E-value=49 Score=24.41 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=21.7
Q ss_pred CCcEEEEEEEeCCCCCC-------CCCeeeEe
Q 031856 49 DGGTFKLTLQFTEDYPN-------KPPTVRFV 73 (152)
Q Consensus 49 ~gg~f~~~i~fp~~yP~-------~pP~i~f~ 73 (152)
+.|.|.|.-.+|--||. .||.|.|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 34899999999999986 78999887
No 86
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=20.88 E-value=54 Score=15.44 Aligned_cols=14 Identities=29% Similarity=0.684 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHhh
Q 031856 5 AKKRLMRDFKRLQQ 18 (152)
Q Consensus 5 a~~Rl~~E~~~l~~ 18 (152)
..|++++||..|..
T Consensus 11 dKR~lLkeyY~L~~ 24 (26)
T 2c5k_P 11 DRRLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhhhc
Confidence 45778889988765
No 87
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=20.82 E-value=58 Score=23.26 Aligned_cols=23 Identities=17% Similarity=0.242 Sum_probs=20.6
Q ss_pred cEEEEEEEeCCCCCCC-----CCeeeEe
Q 031856 51 GTFKLTLQFTEDYPNK-----PPTVRFV 73 (152)
Q Consensus 51 g~f~~~i~fp~~yP~~-----pP~i~f~ 73 (152)
|.|.|.-.+|--||.. ||.|.|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8999999999999987 8888876
No 88
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=20.34 E-value=53 Score=24.42 Aligned_cols=24 Identities=21% Similarity=0.516 Sum_probs=20.1
Q ss_pred CcEEEEEEEeCCCCC------------------CCCCeeeEe
Q 031856 50 GGTFKLTLQFTEDYP------------------NKPPTVRFV 73 (152)
Q Consensus 50 gg~f~~~i~fp~~yP------------------~~pP~i~f~ 73 (152)
.|.|.|.-.+|-.|| ..||.|.|.
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 489999999998887 468999886
Done!