BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031858
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O13801|YE04_SCHPO Uncharacterized RNA-binding protein C17H9.04c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC17H9.04c PE=1 SV=1
Length = 604
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 58/144 (40%), Gaps = 15/144 (10%)
Query: 3 RPGDWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRPGDWYC 62
RPGDWNC C NFQRR SC RC P + G F +G
Sbjct: 343 RPGDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSAATGSNTFSPDFPYGN----------- 391
Query: 63 SAGNCGAH---NFASRSSCFKCGAFKDDVAGGGFDCDMPRSRGSSFGGGNRSGWKSGDWI 119
S GN +H N+ + D+ + + S GGN +++GDW
Sbjct: 392 SYGNGSSHFIANYGGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGN-VPFRAGDWK 450
Query: 120 CTRSGCNEHNFASRMECFRCNAPR 143
C GC HNFA + C RC A R
Sbjct: 451 CGSEGCGYHNFAKNVCCLRCGASR 474
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 58/147 (39%), Gaps = 11/147 (7%)
Query: 3 RPGDWNCRS--CQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGS-SFGFGTGSDVRPGD 59
R GDW C S C + NF + C RCG R++ G + S+ + S + P
Sbjct: 445 RAGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAVVADHASGPVNGSYSHNSYSHIPPV- 503
Query: 60 WYCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGFDCDMPR-SRGSSFGGGNRSGWKS--G 116
S N + + S+ S A GG ++ R F +R + G
Sbjct: 504 MSTSPPNHSVYPY-SQLSINSVTANHGQNFGGQNGGNVSRFDDHGRFKEVSRPSVTTDQG 562
Query: 117 DWICTRSGCNEHNFASRMECFRCNAPR 143
DW+C C NF R C RCNAP
Sbjct: 563 DWLCE---CGFTNFRRRSNCLRCNAPH 586
>sp|Q19QU3|ZRAB2_PIG Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa
GN=ZRANB2 PE=2 SV=1
Length = 328
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 55 VRPGDWYCSAGNCGAHNFASRSSCFKCGAFKDDVA----GGGFDCDMPRSRGSSFGGGNR 110
V GDW C CG NFA R+SC +CG K A GG + G + +R
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEI------GKTLAEKSR 61
Query: 111 SGWKSGDWICTRSGCNEHNFASRMECFRCNAPR 143
+ + DW C C+ N+A R EC CN P+
Sbjct: 62 GLFSANDWQC--KTCSNVNWARRSECNMCNTPK 92
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 5 GDWNC--RSCQHLNFQRRDSCQRCGDPRSS-GDFCGFGGRGGGSSFGFGTGSDVRPGDWY 61
GDW C + C ++NF RR SC RCG +++ GG G + + DW
Sbjct: 11 GDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQ 70
Query: 62 CSAGNCGAHNFASRSSCFKCGAFK 85
C C N+A RS C C K
Sbjct: 71 CKT--CSNVNWARRSECNMCNTPK 92
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSG--DFCGFGG 40
DW C++C ++N+ RR C C P+ + + G+GG
Sbjct: 68 DWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGG 104
>sp|Q5R580|ZRAB2_PONAB Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii
GN=ZRANB2 PE=2 SV=1
Length = 320
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 55 VRPGDWYCSAGNCGAHNFASRSSCFKCGAFKDDVA----GGGFDCDMPRSRGSSFGGGNR 110
V GDW C CG NFA R+SC +CG K A GG + G + +R
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEI------GKTLAEKSR 61
Query: 111 SGWKSGDWICTRSGCNEHNFASRMECFRCNAPR 143
+ + DW C C+ N+A R EC CN P+
Sbjct: 62 GLFSANDWQC--KTCSNVNWARRSECNMCNTPK 92
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 5 GDWNC--RSCQHLNFQRRDSCQRCGDPRSS-GDFCGFGGRGGGSSFGFGTGSDVRPGDWY 61
GDW C + C ++NF RR SC RCG +++ GG G + + DW
Sbjct: 11 GDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQ 70
Query: 62 CSAGNCGAHNFASRSSCFKCGAFK 85
C C N+A RS C C K
Sbjct: 71 CKT--CSNVNWARRSECNMCNTPK 92
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSG--DFCGFGG 40
DW C++C ++N+ RR C C P+ + + G+GG
Sbjct: 68 DWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGG 104
>sp|O35986|ZRAB2_RAT Zinc finger Ran-binding domain-containing protein 2 OS=Rattus
norvegicus GN=Zranb2 PE=2 SV=2
Length = 330
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 55 VRPGDWYCSAGNCGAHNFASRSSCFKCGAFKDDVA----GGGFDCDMPRSRGSSFGGGNR 110
V GDW C CG NFA R+SC +CG K A GG + G + +R
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEI------GKTLAEKSR 61
Query: 111 SGWKSGDWICTRSGCNEHNFASRMECFRCNAPR 143
+ + DW C C+ N+A R EC CN P+
Sbjct: 62 GLFSANDWQC--KTCSNVNWARRSECNMCNTPK 92
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 5 GDWNC--RSCQHLNFQRRDSCQRCGDPRSS-GDFCGFGGRGGGSSFGFGTGSDVRPGDWY 61
GDW C + C ++NF RR SC RCG +++ GG G + + DW
Sbjct: 11 GDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQ 70
Query: 62 CSAGNCGAHNFASRSSCFKCGAFK 85
C C N+A RS C C K
Sbjct: 71 CKT--CSNVNWARRSECNMCNTPK 92
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSG--DFCGFGG 40
DW C++C ++N+ RR C C P+ + + G+GG
Sbjct: 68 DWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGG 104
>sp|Q9R020|ZRAB2_MOUSE Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus
GN=Zranb2 PE=1 SV=2
Length = 330
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 55 VRPGDWYCSAGNCGAHNFASRSSCFKCGAFKDDVA----GGGFDCDMPRSRGSSFGGGNR 110
V GDW C CG NFA R+SC +CG K A GG + G + +R
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEI------GKTLAEKSR 61
Query: 111 SGWKSGDWICTRSGCNEHNFASRMECFRCNAPR 143
+ + DW C C+ N+A R EC CN P+
Sbjct: 62 GLFSANDWQC--KTCSNVNWARRSECNMCNTPK 92
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 5 GDWNC--RSCQHLNFQRRDSCQRCGDPRSS-GDFCGFGGRGGGSSFGFGTGSDVRPGDWY 61
GDW C + C ++NF RR SC RCG +++ GG G + + DW
Sbjct: 11 GDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQ 70
Query: 62 CSAGNCGAHNFASRSSCFKCGAFK 85
C C N+A RS C C K
Sbjct: 71 CKT--CSNVNWARRSECNMCNTPK 92
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSG--DFCGFGG 40
DW C++C ++N+ RR C C P+ + + G+GG
Sbjct: 68 DWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGG 104
>sp|O95218|ZRAB2_HUMAN Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens
GN=ZRANB2 PE=1 SV=2
Length = 330
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 55 VRPGDWYCSAGNCGAHNFASRSSCFKCGAFKDDVA----GGGFDCDMPRSRGSSFGGGNR 110
V GDW C CG NFA R+SC +CG K A GG + G + +R
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEI------GKTLAEKSR 61
Query: 111 SGWKSGDWICTRSGCNEHNFASRMECFRCNAPR 143
+ + DW C C+ N+A R EC CN P+
Sbjct: 62 GLFSANDWQC--KTCSNVNWARRSECNMCNTPK 92
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 5 GDWNC--RSCQHLNFQRRDSCQRCGDPRSS-GDFCGFGGRGGGSSFGFGTGSDVRPGDWY 61
GDW C + C ++NF RR SC RCG +++ GG G + + DW
Sbjct: 11 GDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQ 70
Query: 62 CSAGNCGAHNFASRSSCFKCGAFK 85
C C N+A RS C C K
Sbjct: 71 CKT--CSNVNWARRSECNMCNTPK 92
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSG--DFCGFGG 40
DW C++C ++N+ RR C C P+ + + G+GG
Sbjct: 68 DWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGG 104
>sp|Q5ZLX5|ZRAB2_CHICK Zinc finger Ran-binding domain-containing protein 2 OS=Gallus
gallus GN=ZRANB2 PE=2 SV=1
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 55 VRPGDWYCSAGNCGAHNFASRSSCFKCGAFKDDVA----GGGFDCDMPRSRGSSFGGGNR 110
V GDW C CG NFA R+SC +CG K A GG + G + +R
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEI------GKTLAEKSR 61
Query: 111 SGWKSGDWICTRSGCNEHNFASRMECFRCNAPR 143
+ + DW C C N+A R EC CN P+
Sbjct: 62 GLFSANDWQC--KTCGNVNWARRSECNMCNTPK 92
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 5 GDWNC--RSCQHLNFQRRDSCQRCGDPRSS-GDFCGFGGRGGGSSFGFGTGSDVRPGDWY 61
GDW C + C ++NF RR SC RCG +++ GG G + + DW
Sbjct: 11 GDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQ 70
Query: 62 CSAGNCGAHNFASRSSCFKCGAFK 85
C CG N+A RS C C K
Sbjct: 71 CKT--CGNVNWARRSECNMCNTPK 92
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSG--DFCGFGG 40
DW C++C ++N+ RR C C P+ + + G+GG
Sbjct: 68 DWQCKTCGNVNWARRSECNMCNTPKYAKLEERTGYGG 104
>sp|Q01844|EWS_HUMAN RNA-binding protein EWS OS=Homo sapiens GN=EWSR1 PE=1 SV=1
Length = 656
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 100 SRGSSFGGGNRSGWKSGDWICTRSGCNEHNFASRMECFRCNAPR 143
SRG+ GGGN ++GDW C GC NFA R EC +C AP+
Sbjct: 505 SRGNPSGGGNVQ-HRAGDWQCPNPGCGNQNFAWRTECNQCKAPK 547
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 56 RPGDWYCSAGNCGAHNFASRSSCFKCGAFK 85
R GDW C CG NFA R+ C +C A K
Sbjct: 518 RAGDWQCPNPGCGNQNFAWRTECNQCKAPK 547
>sp|Q61545|EWS_MOUSE RNA-binding protein EWS OS=Mus musculus GN=Ewsr1 PE=1 SV=2
Length = 655
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 100 SRGSSFGGGNRSGWKSGDWICTRSGCNEHNFASRMECFRCNAPR 143
SRG+ GGGN ++GDW C GC NFA R EC +C AP+
Sbjct: 504 SRGNPSGGGNVQ-HRAGDWQCPNPGCGNQNFAWRTECNQCKAPK 546
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 56 RPGDWYCSAGNCGAHNFASRSSCFKCGAFK 85
R GDW C CG NFA R+ C +C A K
Sbjct: 517 RAGDWQCPNPGCGNQNFAWRTECNQCKAPK 546
>sp|Q8S9K3|VAR3_ARATH Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana
GN=VAR3 PE=1 SV=2
Length = 758
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 29/109 (26%)
Query: 38 FGGRGGGSSFGFGTGSDVRPGDWYCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGFDCDM 97
+ R G F +++ GDW CS C NFA CF+C D
Sbjct: 258 YSDRDGQGVRSFQNNVEMKRGDWICS--RCSGMNFARNVKCFQC--------------DE 301
Query: 98 PRSRGSSFGGGNRSGWKSGDWICTRSGCNEHNFASRMECFRCNA--PRD 144
R + G +W C + C+ +N+ + C RC+ PRD
Sbjct: 302 ARPKRQLTGS---------EWECPQ--CDFYNYGRNVACLRCDCKRPRD 339
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 33/105 (31%), Gaps = 36/105 (34%)
Query: 5 GDWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRPGDWYCSA 64
GDW C C +NF R C +C + R G +W C
Sbjct: 278 GDWICSRCSGMNFARNVKCFQCDEARPKRQLTG--------------------SEWECP- 316
Query: 65 GNCGAHNFASRSSCFKCGAFKDDVAGGGFDCDMPRSRGSSFGGGN 109
C +N+ +C +C DC PR SS N
Sbjct: 317 -QCDFYNYGRNVACLRC------------DCKRPRD--SSLNSAN 346
>sp|P32770|NRP1_YEAST Asparagine-rich protein OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NRP1 PE=1 SV=2
Length = 719
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 20/30 (66%)
Query: 3 RPGDWNCRSCQHLNFQRRDSCQRCGDPRSS 32
RPGDWNC SC NFQRR +C RC P S
Sbjct: 355 RPGDWNCPSCGFSNFQRRTACFRCSFPAPS 384
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 3 RPGDWNCRSCQHLNFQRRDSCQRCGDPRS-SGDFCGFGGRGGGSSFG 48
R GDW C +C + NF + C RCG P+S SGD S+FG
Sbjct: 581 RAGDWKCSTCTYHNFAKNVVCLRCGGPKSISGDASETNHYIDSSTFG 627
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 108 GNRSGWKSGDWICTRSGCNEHNFASRMECFRCNAPRDFG 146
G+ +++GDW C S C HNFA + C RC P+
Sbjct: 575 GSNMPFRAGDWKC--STCTYHNFAKNVVCLRCGGPKSIS 611
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 56 RPGDWYCSAGNCGAHNFASRSSCFKCG 82
RPGDW C + CG NF R++CF+C
Sbjct: 355 RPGDWNCPS--CGFSNFQRRTACFRCS 379
>sp|Q9ERU9|RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=2
Length = 3053
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 32/157 (20%)
Query: 7 WNCRSCQHLNFQRRDSCQRC--GDPRSSGDFC-------GFGGRGG--GSSFGFGTGSDV 55
WNC SC N C C +P S+ + GF + G + F T +
Sbjct: 1350 WNCNSCSFKNAATAKKCVSCQNTNPTSNKELLGPPLVENGFAPKTGLENAQDRFATMTAN 1409
Query: 56 RPGDWYCSAGNCGAHNFASRSSCFKCGAFKDDVA--------GGGFDCDMPRSRGSSFGG 107
+ G W CS C N + S C C K + G G D+P+S S F
Sbjct: 1410 KEGHWDCSV--CLVRNEPTVSRCIACQNTKSASSFVQTSFKFGQG---DLPKSVDSDF-- 1462
Query: 108 GNRSGW--KSGDWICTRSGCNEHNFASRMECFRCNAP 142
RS + K G W C S C N S +C C P
Sbjct: 1463 --RSVFSKKEGQWEC--SVCLVRNERSAKKCVACENP 1495
Score = 37.4 bits (85), Expect = 0.033, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 49/154 (31%), Gaps = 51/154 (33%)
Query: 2 NRPGDWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTG-------SD 54
N+ G W+C C N C C + +S+ F +SF FG G SD
Sbjct: 1409 NKEGHWDCSVCLVRNEPTVSRCIACQNTKSASSFVQ-------TSFKFGQGDLPKSVDSD 1461
Query: 55 VRP------GDWYCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGFDCDMPRSRGSSFGGG 108
R G W CS C N S C C
Sbjct: 1462 FRSVFSKKEGQWECSV--CLVRNERSAKKCVAC--------------------------- 1492
Query: 109 NRSGWKSGDWICTRSGCNEHNFASRMECFRCNAP 142
G + +W C S C+ N A ++C CN P
Sbjct: 1493 ENPGKQFKEWHC--SLCSVKNEAHAIKCVACNNP 1524
>sp|Q92804|RBP56_HUMAN TATA-binding protein-associated factor 2N OS=Homo sapiens GN=TAF15
PE=1 SV=1
Length = 592
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 114 KSGDWICTRSGCNEHNFASRMECFRCNAPRDFGNRIS 150
KSGDW+C C NFA R C +CN PR +R S
Sbjct: 354 KSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPS 390
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 8/41 (19%)
Query: 3 RPGDWNCR--SCQHLNFQRRDSCQRCGDPR------SSGDF 35
+ GDW C SC ++NF RR+SC +C +PR S GDF
Sbjct: 354 KSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDF 394
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 54 DVRPGDWYCSAGNCGAHNFASRSSCFKC 81
D + GDW C +CG NFA R+SC +C
Sbjct: 352 DPKSGDWVCPNPSCGNMNFARRNSCNQC 379
>sp|A4IGK4|RBM5_XENTR RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1
Length = 838
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 53 SDVRPG--DWYCSAGNCGAHNFASRSSCFKCGAFK--DDVAGGGFDCDMPRS 100
S+ RP DW C+ CG +NF R CF+CGA K D+ D P+S
Sbjct: 181 SNPRPKFEDWLCN--KCGLYNFRRRLKCFRCGAAKAESDLEAPSGSSDAPQS 230
Score = 35.0 bits (79), Expect = 0.16, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGDF 35
DW C C NF+RR C RCG ++ D
Sbjct: 189 DWLCNKCGLYNFRRRLKCFRCGAAKAESDL 218
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 114 KSGDWICTRSGCNEHNFASRMECFRCNAPR 143
K DW+C + C +NF R++CFRC A +
Sbjct: 186 KFEDWLCNK--CGLYNFRRRLKCFRCGAAK 213
>sp|P70501|RBM10_RAT RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=2 SV=1
Length = 852
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGD 34
DW C C NF+RR+ C +CG P+S +
Sbjct: 139 DWLCNKCGVQNFKRREKCFKCGVPKSEAE 167
Score = 36.2 bits (82), Expect = 0.076, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 53 SDVRPG---DWYCSAGNCGAHNFASRSSCFKCGAFKDD 87
SD +P DW C+ CG NF R CFKCG K +
Sbjct: 130 SDPKPKINEDWLCN--KCGVQNFKRREKCFKCGVPKSE 165
Score = 33.1 bits (74), Expect = 0.67, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 117 DWICTRSGCNEHNFASRMECFRCNAPR 143
DW+C + C NF R +CF+C P+
Sbjct: 139 DWLCNK--CGVQNFKRREKCFKCGVPK 163
>sp|Q99KG3|RBM10_MOUSE RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1
Length = 930
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGD 34
DW C C NF+RR+ C +CG P+S +
Sbjct: 216 DWLCNKCGVQNFKRREKCFKCGVPKSEAE 244
Score = 36.2 bits (82), Expect = 0.076, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 53 SDVRPG---DWYCSAGNCGAHNFASRSSCFKCGAFKDD 87
SD +P DW C+ CG NF R CFKCG K +
Sbjct: 207 SDPKPKINEDWLCN--KCGVQNFKRREKCFKCGVPKSE 242
Score = 33.1 bits (74), Expect = 0.67, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 117 DWICTRSGCNEHNFASRMECFRCNAPR 143
DW+C + C NF R +CF+C P+
Sbjct: 216 DWLCNK--CGVQNFKRREKCFKCGVPK 240
>sp|P98175|RBM10_HUMAN RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3
Length = 930
Score = 37.0 bits (84), Expect = 0.041, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGD 34
DW C C NF+RR+ C +CG P+S +
Sbjct: 216 DWLCNKCGVQNFKRREKCFKCGVPKSEAE 244
Score = 36.2 bits (82), Expect = 0.080, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 53 SDVRPG---DWYCSAGNCGAHNFASRSSCFKCGAFKDD 87
SD +P DW C+ CG NF R CFKCG K +
Sbjct: 207 SDPKPKINEDWLCN--KCGVQNFKRREKCFKCGVPKSE 242
Score = 33.1 bits (74), Expect = 0.68, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 117 DWICTRSGCNEHNFASRMECFRCNAPR 143
DW+C + C NF R +CF+C P+
Sbjct: 216 DWLCNK--CGVQNFKRREKCFKCGVPK 240
>sp|A0JMV4|RBM5A_XENLA RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1
Length = 833
Score = 36.6 bits (83), Expect = 0.060, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 53 SDVRPG--DWYCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGFDCDMPRSRGSS 104
S+ RP DW C+ CG +NF R CF+CGA K + DM GSS
Sbjct: 180 SNPRPKFEDWLCN--KCGLYNFRRRLKCFRCGAAKA-------ESDMEAPSGSS 224
Score = 34.7 bits (78), Expect = 0.22, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGD 34
DW C C NF+RR C RCG ++ D
Sbjct: 188 DWLCNKCGLYNFRRRLKCFRCGAAKAESD 216
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 114 KSGDWICTRSGCNEHNFASRMECFRCNAPR 143
K DW+C + C +NF R++CFRC A +
Sbjct: 185 KFEDWLCNK--CGLYNFRRRLKCFRCGAAK 212
>sp|Q6DDU9|RBM5B_XENLA RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1
Length = 749
Score = 36.6 bits (83), Expect = 0.063, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 53 SDVRPG--DWYCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGFDCDMPRSRGSS 104
S+ RP DW C+ CG +NF R CF+CGA K + DM GSS
Sbjct: 180 SNPRPKFEDWLCN--KCGLYNFRRRLKCFRCGAAKA-------ESDMEAPSGSS 224
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGD 34
DW C C NF+RR C RCG ++ D
Sbjct: 188 DWLCNKCGLYNFRRRLKCFRCGAAKAESD 216
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 114 KSGDWICTRSGCNEHNFASRMECFRCNAPR 143
K DW+C + C +NF R++CFRC A +
Sbjct: 185 KFEDWLCNK--CGLYNFRRRLKCFRCGAAK 212
>sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2
Length = 3224
Score = 36.2 bits (82), Expect = 0.083, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 54/164 (32%), Gaps = 34/164 (20%)
Query: 3 RPGDWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRP----- 57
+ G W+C +C N C C +PR +SF FGT +
Sbjct: 1479 KEGQWDCSACLVQNEGSSTKCAACQNPRKQS--LPATSIPTPASFKFGTSETSKTLKSGF 1536
Query: 58 --------GDWYCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGFDCDMPRSRGSSFGGGN 109
G W CS+ C N A+ + C C + +P FG
Sbjct: 1537 EDMFAKKEGQWDCSS--CLVRNEANATRCVAC----QNPDKPSPSTSVPAPASFKFGTSE 1590
Query: 110 -----RSGW------KSGDWICTRSGCNEHNFASRMECFRCNAP 142
+SG+ K G W C S C N AS +C C P
Sbjct: 1591 TSKAPKSGFEGMFTKKEGQWDC--SVCLVRNEASATKCIACQNP 1632
>sp|Q9BXU3|TX13A_HUMAN Testis-expressed sequence 13A protein OS=Homo sapiens GN=TEX13A
PE=2 SV=1
Length = 409
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 RPGDWNCRSCQHLNFQRRDSCQRCG 27
RPGDW+C C +NF RRD+C CG
Sbjct: 376 RPGDWDCPWCNAVNFSRRDTCFDCG 400
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 56 RPGDWYCSAGNCGAHNFASRSSCFKCG 82
RPGDW C C A NF+ R +CF CG
Sbjct: 376 RPGDWDCPW--CNAVNFSRRDTCFDCG 400
>sp|Q27294|CAZ_DROME RNA-binding protein cabeza OS=Drosophila melanogaster GN=caz PE=2
SV=2
Length = 399
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 3 RPGDWNCRSCQHLNFQRRDSCQRCGDPR 30
R GDW C SC + NF R+ C RC P+
Sbjct: 275 RDGDWKCNSCNNTNFAWRNECNRCKTPK 302
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 114 KSGDWICTRSGCNEHNFASRMECFRCNAPR 143
+ GDW C + CN NFA R EC RC P+
Sbjct: 275 RDGDWKC--NSCNNTNFAWRNECNRCKTPK 302
>sp|Q8GZ43|YZR3_ARATH RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana
GN=At1g67325 PE=1 SV=1
Length = 288
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 6 DWNCRSCQHLNFQRRDSC--QRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRPGDWYCS 63
DW C +C ++NF R C ++C P+ G + GGSS + + G W C
Sbjct: 197 DWTCPNCGNVNFSFRTVCNMRKCNTPKP-------GSQQGGSSDKI-SKQNAPEGSWKCD 248
Query: 64 AGNCGAHNFASRSSCFK--CGAFK 85
NCG N+ RS C + CGA K
Sbjct: 249 --NCGNINYPFRSKCNRQNCGADK 270
>sp|Q1RMU5|RBM5_BOVIN RNA-binding protein 5 OS=Bos taurus GN=RBM5 PE=2 SV=1
Length = 815
Score = 33.5 bits (75), Expect = 0.51, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 114 KSGDWICTRSGCNEHNFASRMECFRCNAPR 143
K DW+C + C +NF R++CFRC A +
Sbjct: 181 KFEDWLCNK--CCLNNFRKRLKCFRCGADK 208
Score = 33.1 bits (74), Expect = 0.67, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 53 SDVRPG--DWYCSAGNCGAHNFASRSSCFKCGAFKDD 87
S+ RP DW C+ C +NF R CF+CGA K D
Sbjct: 176 SNPRPKFEDWLCN--KCCLNNFRKRLKCFRCGADKFD 210
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 10/57 (17%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRPGDWYC 62
DW C C NF++R C RCG + + GT V+ D+YC
Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKFDSE----------QEVPPGTTESVQSVDYYC 230
>sp|B2GV05|RBM5_RAT RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=2 SV=1
Length = 815
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 117 DWICTRSGCNEHNFASRMECFRCNAPR 143
DW+C + C +NF R++CFRC A +
Sbjct: 184 DWLCNK--CCLNNFRKRLKCFRCGADK 208
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 53 SDVRPG--DWYCSAGNCGAHNFASRSSCFKCGAFKDD 87
S+ RP DW C+ C +NF R CF+CGA K D
Sbjct: 176 SNPRPKFEDWLCN--KCCLNNFRKRLKCFRCGADKFD 210
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 10/57 (17%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRPGDWYC 62
DW C C NF++R C RCG + + GT V+ D+YC
Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKFDSE----------QEVPPGTTESVQSVDYYC 230
>sp|P52756|RBM5_HUMAN RNA-binding protein 5 OS=Homo sapiens GN=RBM5 PE=1 SV=2
Length = 815
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 114 KSGDWICTRSGCNEHNFASRMECFRCNAPR 143
K DW+C + C +NF R++CFRC A +
Sbjct: 181 KFEDWLCNK--CCLNNFRKRLKCFRCGADK 208
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 53 SDVRPG--DWYCSAGNCGAHNFASRSSCFKCGAFKDD 87
S+ RP DW C+ C +NF R CF+CGA K D
Sbjct: 176 SNPRPKFEDWLCN--KCCLNNFRKRLKCFRCGADKFD 210
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 10/57 (17%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRPGDWYC 62
DW C C NF++R C RCG + + GT V+ D+YC
Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKFDSE----------QEVPPGTTESVQSVDYYC 230
>sp|Q91YE7|RBM5_MOUSE RNA-binding protein 5 OS=Mus musculus GN=Rbm5 PE=1 SV=1
Length = 815
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 117 DWICTRSGCNEHNFASRMECFRCNAPR 143
DW+C + C +NF R++CFRC A +
Sbjct: 184 DWLCNK--CCLNNFRKRLKCFRCGADK 208
Score = 32.7 bits (73), Expect = 0.77, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 53 SDVRPG--DWYCSAGNCGAHNFASRSSCFKCGAFKDD 87
S+ RP DW C+ C +NF R CF+CGA K D
Sbjct: 176 SNPRPKFEDWLCN--KCCLNNFRKRLKCFRCGADKFD 210
Score = 29.6 bits (65), Expect = 7.3, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 6 DWNCRSCQHLNFQRRDSCQRCG 27
DW C C NF++R C RCG
Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCG 205
>sp|Q1IHH4|RPOB_KORVE DNA-directed RNA polymerase subunit beta OS=Koribacter versatilis
(strain Ellin345) GN=rpoB PE=3 SV=1
Length = 1489
Score = 33.1 bits (74), Expect = 0.64, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 4 PGDWNCRSCQHLNFQRRDSCQRCGDP 29
PGD C C N D C +CGDP
Sbjct: 112 PGDVLCHKCGTFNANTPDFCNKCGDP 137
>sp|P87143|YDMD_SCHPO Uncharacterized RNA-binding protein C57A7.13 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.13 PE=4 SV=1
Length = 565
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 7 WNCRSCQHLNFQRRDSCQRCGDPRSSG 33
W C++C LN+ R+SC +C PR+
Sbjct: 159 WCCQNCDILNYSYRESCFKCRVPRNQA 185
Score = 29.3 bits (64), Expect = 8.2, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 16/58 (27%)
Query: 60 WYCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGFDCDMPRSRGSSFGGGNRSGWKSGD 117
W C NC N++ R SCFK C +PR++ S G ++ ++GD
Sbjct: 159 WCCQ--NCDILNYSYRESCFK--------------CRVPRNQASIAIGNHKISKRNGD 200
>sp|O75808|CAN15_HUMAN Calpain-15 OS=Homo sapiens GN=SOLH PE=2 SV=1
Length = 1086
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 30/93 (32%), Gaps = 14/93 (15%)
Query: 1 MNRPGDWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRPGDW 60
M G+W+C C LN + C C PR D V W
Sbjct: 1 MATVGEWSCVRCTFLNPAGQRQCSICEAPRHKPDLNHI------------LRLSVEEQKW 48
Query: 61 YCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGF 93
C+ C NF + +C CG + G F
Sbjct: 49 PCA--RCTFRNFLGKEACEVCGFTPEPAPGAAF 79
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 2 NRPGDWNCRSCQHLNFQRRDSCQRCGDPR 30
RPG W C +C LN R C C P+
Sbjct: 411 ERPGQWACPACTLLNALRAKHCAACHTPQ 439
>sp|Q7M760|ZRAN1_MOUSE Ubiquitin thioesterase Zranb1 OS=Mus musculus GN=Zranb1 PE=2 SV=1
Length = 708
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 14/93 (15%)
Query: 1 MNRPGDWNCRSCQHLNFQRRDSCQRC------GDPRSSGDFCGFGGRGGGSS------FG 48
M W+C C +LN+ R C +C P S G G R S +
Sbjct: 82 MENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYN 141
Query: 49 FGTGSDVRPGDWYCSAGNCGAHNFASRSSCFKC 81
+ R W CS C N+A C C
Sbjct: 142 DRNKLNTRTQHWTCSV--CTYENWAKAKKCVVC 172
>sp|Q9JLG8|CAN15_MOUSE Calpain-15 OS=Mus musculus GN=Solh PE=1 SV=1
Length = 1095
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 30/93 (32%), Gaps = 14/93 (15%)
Query: 1 MNRPGDWNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGSDVRPGDW 60
M G+W+C C LN + C C PR D V W
Sbjct: 1 MATVGEWSCARCTFLNPAGQRQCSICEAPRHKPDLDQI------------LRLSVEEQKW 48
Query: 61 YCSAGNCGAHNFASRSSCFKCGAFKDDVAGGGF 93
C+ C NF + +C CG + V G
Sbjct: 49 PCA--RCTFRNFLGKEACEVCGFTPEPVPGAPL 79
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 2 NRPGDWNCRSCQHLNFQRRDSCQRCGDPR 30
+RPG W C +C +N R C C P+
Sbjct: 421 DRPGQWACPACTLINTPRAKHCAACHTPQ 449
>sp|Q7TSH3|ZN516_MOUSE Zinc finger protein 516 OS=Mus musculus GN=Znf516 PE=2 SV=1
Length = 1157
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
Query: 77 SCFKCGAFKD---DVAGGGFDCDMPRSRGSSFGGGNRSGWKSGDWICTRSGCNEH----- 128
S FK KD G G P RG+S G R+ GD++C G + H
Sbjct: 1048 SIFKTYIPKDFATLYQGWGVSSPGPEHRGTSLTGTPRTQAHQGDFVCVECGKSFHQPSQL 1107
Query: 129 --NFASRMECFRCNAPRD 144
+ + F C+ PRD
Sbjct: 1108 RAHLRAHTVVFECDGPRD 1125
>sp|Q9UGI0|ZRAN1_HUMAN Ubiquitin thioesterase ZRANB1 OS=Homo sapiens GN=ZRANB1 PE=1 SV=2
Length = 708
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 14/93 (15%)
Query: 1 MNRPGDWNCRSCQHLNFQRRDSCQRC------GDPRSSGDFCGFGGRGGGSS------FG 48
M W+C C +LN+ R C +C P S G G R S +
Sbjct: 82 MENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYN 141
Query: 49 FGTGSDVRPGDWYCSAGNCGAHNFASRSSCFKC 81
+ R W CS C N+A C C
Sbjct: 142 DRNKLNTRTQHWTCSV--CTYENWAKAKRCVVC 172
>sp|A6QP16|ZRAN1_BOVIN Ubiquitin thioesterase ZRANB1 OS=Bos taurus GN=ZRANB1 PE=2 SV=1
Length = 708
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 14/93 (15%)
Query: 1 MNRPGDWNCRSCQHLNFQRRDSCQRC------GDPRSSGDFCGFGGRGGGSS------FG 48
M W+C C +LN+ R C +C P S G G R S +
Sbjct: 82 MENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYN 141
Query: 49 FGTGSDVRPGDWYCSAGNCGAHNFASRSSCFKC 81
+ R W CS C N+A C C
Sbjct: 142 DRNKLNTRTQHWTCSI--CTYENWAKAKKCVVC 172
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Query: 7 WNCRSCQHLNFQRRDSCQRCGDPRSSGDFCGFGGRGGGSSFGFGTGS---DVRPGDWYCS 63
W+C +C LN C C PR G G G G+ GTG D+ G W C
Sbjct: 304 WHCAACAMLNEPWAVLCVACDRPR------GCKGLGLGTEGPQGTGGLEPDLARGRWACQ 357
Query: 64 AGNCGAHNFASRSSCFKC 81
+ C N A+ C C
Sbjct: 358 S--CTFENEAAAVLCSIC 373
>sp|Q5U595|ZRN1A_XENLA Ubiquitin thioesterase zranb1-A OS=Xenopus laevis GN=zranb1-a PE=2
SV=1
Length = 701
Score = 29.6 bits (65), Expect = 6.6, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 33/93 (35%), Gaps = 14/93 (15%)
Query: 1 MNRPGDWNCRSCQHLNFQRRDSCQRC------GDPRSSGDFCGFGGRGGGS------SFG 48
M W+C+ C +LN+ R C +C P S G G R S +
Sbjct: 77 MEPSSKWSCQICTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGLRSIPSPIDPCEEYN 136
Query: 49 FGTGSDVRPGDWYCSAGNCGAHNFASRSSCFKC 81
+++ W CSA C N A C C
Sbjct: 137 DRNKLNIKGQHWTCSA--CTYENCAKAKKCVVC 167
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.513
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,144,269
Number of Sequences: 539616
Number of extensions: 3284882
Number of successful extensions: 13180
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 9344
Number of HSP's gapped (non-prelim): 2289
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)