Query 031861
Match_columns 151
No_of_seqs 135 out of 1097
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 09:54:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031861.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031861hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fftb2 f.17.2.1 (B:27-117) Cy 6.6 70 0.0051 19.1 0.7 8 118-125 42-49 (91)
2 d1v7fa_ g.3.6.2 (A:) Phrixotox 5.5 80 0.0058 15.0 0.4 8 52-59 12-19 (29)
3 d2qtva1 a.71.2.1 (A:524-626) S 5.1 1.2E+02 0.009 18.8 1.3 15 40-54 56-70 (103)
4 d1v54m_ f.23.7.1 (M:) Mitochon 4.9 2.6E+02 0.019 14.5 2.4 16 4-19 21-36 (43)
5 d1m15a1 a.83.1.1 (A:2-95) Argi 3.8 2.9E+02 0.021 16.6 2.4 25 43-67 30-55 (94)
6 d1jm6a1 a.29.5.1 (A:1003-1169) 3.4 2.5E+02 0.018 18.5 1.9 26 41-66 3-28 (167)
7 d1y8oa1 a.29.5.1 (A:13-176) Py 3.4 3.1E+02 0.022 17.9 2.4 23 45-67 1-23 (164)
8 d1w98b1 a.74.1.1 (B:228-357) G 3.2 5.4E+02 0.039 16.2 3.4 37 20-60 75-111 (130)
9 d1kf6c_ f.21.2.2 (C:) Fumarate 3.0 2.7E+02 0.019 17.9 1.7 54 48-105 22-76 (130)
10 d1e7ua1 a.118.1.6 (A:525-725) 2.9 4.8E+02 0.035 17.4 3.1 28 40-67 132-159 (201)
No 1
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=6.57 E-value=70 Score=19.10 Aligned_cols=8 Identities=25% Similarity=0.202 Sum_probs=4.6
Q ss_pred hcCCCccc
Q 031861 118 LYPAKKAV 125 (151)
Q Consensus 118 ~Y~~~~~~ 125 (151)
.||+++++
T Consensus 42 ryR~~~~~ 49 (91)
T d1fftb2 42 KYRASNKD 49 (91)
T ss_dssp TTTTSTTT
T ss_pred eeeccCCc
Confidence 57766543
No 2
>d1v7fa_ g.3.6.2 (A:) Phrixotoxin 1 (PaTX1) {Chilean copper tarantula (Phrixotrichus auratus) [TaxId: 269635]}
Probab=5.55 E-value=80 Score=14.98 Aligned_cols=8 Identities=38% Similarity=0.758 Sum_probs=5.6
Q ss_pred hhCccccc
Q 031861 52 RRKSTDGF 59 (151)
Q Consensus 52 krKSt~Gl 59 (151)
+||.++|+
T Consensus 12 ~rkccegl 19 (29)
T d1v7fa_ 12 ARKCCEGL 19 (29)
T ss_dssp TCCBCTTC
T ss_pred hhhhhccc
Confidence 57777775
No 3
>d2qtva1 a.71.2.1 (A:524-626) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.10 E-value=1.2e+02 Score=18.83 Aligned_cols=15 Identities=27% Similarity=0.328 Sum_probs=12.6
Q ss_pred HhhhhhHHHHHhhhC
Q 031861 40 LIKYIPQAIMNFRRK 54 (151)
Q Consensus 40 ~~s~iPQI~~N~krK 54 (151)
..+.+||.+-+.||-
T Consensus 56 ~fs~~PqfmfhLRRS 70 (103)
T d2qtva1 56 NFSLYPQFTYYLRRS 70 (103)
T ss_dssp TTTTHHHHHHHHHTS
T ss_pred HHHhhHHHHHHHhhh
Confidence 356799999999996
No 4
>d1v54m_ f.23.7.1 (M:) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.85 E-value=2.6e+02 Score=14.48 Aligned_cols=16 Identities=6% Similarity=0.063 Sum_probs=7.5
Q ss_pred hHHHHHHHHHHHHhhc
Q 031861 4 VSVVWLAAAVCFFVAL 19 (151)
Q Consensus 4 ~~~v~~~~~~~~~~~~ 19 (151)
+|++..-+-.+|+++.
T Consensus 21 ~~f~~~L~PaGwVLsh 36 (43)
T d1v54m_ 21 VTFLSFLLPAGWVLYH 36 (43)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHccHHHHHHH
Confidence 3444444445555543
No 5
>d1m15a1 a.83.1.1 (A:2-95) Arginine kinase, N-domain {Horseshoe crab (Limulus polyphemus) [TaxId: 6850]}
Probab=3.85 E-value=2.9e+02 Score=16.58 Aligned_cols=25 Identities=12% Similarity=0.266 Sum_probs=18.7
Q ss_pred hhhHHHHHhhhCccc-ccchHHHHHH
Q 031861 43 YIPQAIMNFRRKSTD-GFSIGNILLD 67 (151)
Q Consensus 43 ~iPQI~~N~krKSt~-GlS~~f~~l~ 67 (151)
.-|+++..+|.|+|. |.++.-.+-.
T Consensus 30 LT~ev~~~lk~k~T~~G~tl~~~I~s 55 (94)
T d1m15a1 30 LTKDVFDSIKNKKTGMGATLLDVIQS 55 (94)
T ss_dssp CCHHHHHHHTTCBCTTCCBHHHHHHH
T ss_pred CCHHHHHHHhcCCCCCCCcHHHHHHh
Confidence 469999999999776 6666655544
No 6
>d1jm6a1 a.29.5.1 (A:1003-1169) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Probab=3.40 E-value=2.5e+02 Score=18.55 Aligned_cols=26 Identities=23% Similarity=0.289 Sum_probs=22.3
Q ss_pred hhhhhHHHHHhhhCcccccchHHHHH
Q 031861 41 IKYIPQAIMNFRRKSTDGFSIGNILL 66 (151)
Q Consensus 41 ~s~iPQI~~N~krKSt~GlS~~f~~l 66 (151)
++-.|+.+..|.+++..++|+.-++.
T Consensus 3 ~~~~~~~I~~ya~~~~tplSL~ql~~ 28 (167)
T d1jm6a1 3 LAGAPKYIEHFSKFSPSPLSMKQFLD 28 (167)
T ss_dssp TTSHHHHHHHHTTSCCCCCBHHHHHT
T ss_pred hhhhHHHHHHHHcCCCCCCCHHHHHH
Confidence 45689999999999999999877665
No 7
>d1y8oa1 a.29.5.1 (A:13-176) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.36 E-value=3.1e+02 Score=17.95 Aligned_cols=23 Identities=30% Similarity=0.335 Sum_probs=19.9
Q ss_pred hHHHHHhhhCcccccchHHHHHH
Q 031861 45 PQAIMNFRRKSTDGFSIGNILLD 67 (151)
Q Consensus 45 PQI~~N~krKSt~GlS~~f~~l~ 67 (151)
|+.+..|-+++..++|+.-++.-
T Consensus 1 ~~~i~~ya~~~~t~lSL~ql~~f 23 (164)
T d1y8oa1 1 PKQIERYSRFSPSPLSIKQFLDF 23 (164)
T ss_dssp CHHHHHHHHSCCCCCBHHHHHHH
T ss_pred CHHHHHHHcCCCCCCCHHHHHHh
Confidence 88899999999999999876644
No 8
>d1w98b1 a.74.1.1 (B:228-357) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.17 E-value=5.4e+02 Score=16.25 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=27.1
Q ss_pred cccchHHHHHHHHHHHHHHHHhhhhhHHHHHhhhCcccccc
Q 031861 20 PNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFS 60 (151)
Q Consensus 20 ~~~~w~~~~~ilG~i~~~~~~~s~iPQI~~N~krKSt~GlS 60 (151)
+...|..+...+-|+.-++-.++..+. .+.|..+|++
T Consensus 75 SGl~w~~l~~Cv~WM~PF~~vi~~~~~----~~lk~f~~i~ 111 (130)
T d1w98b1 75 SGYQWCDIENCVKWMVPFAMVIRETGS----SKLKHFRGVA 111 (130)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHCC----CCCCCCTTSC
T ss_pred cCccHHHHHHHHHHHHHHHHHHHhccc----hhhcccCCCC
Confidence 357999999999999998888877652 4455555443
No 9
>d1kf6c_ f.21.2.2 (C:) Fumarate reductase subunit FrdC {Escherichia coli [TaxId: 562]}
Probab=3.04 E-value=2.7e+02 Score=17.90 Aligned_cols=54 Identities=9% Similarity=0.154 Sum_probs=23.7
Q ss_pred HHHhhhCcccccchHHHHHHhhhhhhhhhhhhhhhhcc-CCccccccchhHHHHHHHHH
Q 031861 48 IMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQ-NSWVNFYGNIGKTLLSLVSV 105 (151)
Q Consensus 48 ~~N~krKSt~GlS~~f~~l~~~G~i~~~i~ll~~~~~~-~~~~~i~~n~~~l~~s~~~v 105 (151)
|+-|+-|....+...++.+.++=+++.+ ..+... ++|-.+..|+..+++.++++
T Consensus 22 Yr~YMlRE~T~v~~~~f~lvLl~Gl~~L----~~g~~aw~~fv~flqnP~vv~lniiaL 76 (130)
T d1kf6c_ 22 YRFYMLREGTAVPAVWFSIELIFGLFAL----KNGPEAWAGFVDFLQNPVIVIINLITL 76 (130)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHH----HTHHHHHHHHHHHHTSSHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3445545444455555555554444442 222211 12333456665555444443
No 10
>d1e7ua1 a.118.1.6 (A:525-725) Phoshoinositide 3-kinase (PI3K) helical domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=2.91 E-value=4.8e+02 Score=17.43 Aligned_cols=28 Identities=14% Similarity=0.335 Sum_probs=19.6
Q ss_pred HhhhhhHHHHHhhhCcccccchHHHHHH
Q 031861 40 LIKYIPQAIMNFRRKSTDGFSIGNILLD 67 (151)
Q Consensus 40 ~~s~iPQI~~N~krKSt~GlS~~f~~l~ 67 (151)
...++||++..-|-...+.-++.-+++.
T Consensus 132 l~~yLpQLVQaLkye~~~~s~L~~FLi~ 159 (201)
T d1e7ua1 132 VLHYLLQLVQAVKFEPYHDSALARFLLK 159 (201)
T ss_dssp HHHHHHHHHHHGGGCSSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 4567899998888887766555555554
Done!