Query 031864
Match_columns 151
No_of_seqs 132 out of 170
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 09:59:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031864.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031864hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v54j_ f.23.4.1 (J:) Mitochon 25.1 13 0.00093 23.2 1.2 13 131-143 40-52 (58)
2 d2oa4a1 a.4.12.3 (A:1-93) Unch 20.1 33 0.0024 22.9 2.7 34 33-74 23-56 (93)
3 d1xkta_ c.69.1.22 (A:) Fatty a 15.2 24 0.0018 22.8 1.0 51 76-126 64-116 (286)
4 d2p06a1 a.204.1.3 (A:1-84) Hyp 12.0 80 0.0058 20.3 2.9 41 46-99 30-70 (84)
5 d1i5pa3 f.1.3.1 (A:1-263) delt 12.0 69 0.0051 24.0 3.0 24 114-137 60-83 (263)
6 d1pjaa_ c.69.1.13 (A:) Palmito 8.7 32 0.0023 22.0 -0.2 38 77-114 52-89 (268)
7 d2g3qa1 a.5.2.1 (A:1339-1381) 8.3 44 0.0032 19.6 0.4 10 128-137 8-17 (43)
8 d1wr6a1 a.7.8.1 (A:211-300) AD 8.1 2.3E+02 0.016 17.6 4.1 15 52-66 43-57 (90)
9 d2qgsa1 a.211.1.1 (A:1-216) Un 7.1 1.8E+02 0.013 20.6 3.4 15 77-91 200-214 (216)
10 d2oyoa1 a.152.1.3 (A:10-195) U 7.0 2.2E+02 0.016 18.9 3.8 65 77-144 17-83 (186)
No 1
>d1v54j_ f.23.4.1 (J:) Mitochondrial cytochrome c oxidase subunit VIIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=25.07 E-value=13 Score=23.25 Aligned_cols=13 Identities=23% Similarity=0.049 Sum_probs=9.8
Q ss_pred hhhhhheehhhhh
Q 031864 131 LVGIGYTGWFAYK 143 (151)
Q Consensus 131 LVGigyt~WF~yR 143 (151)
++|++|+.|+.|-
T Consensus 40 ~~G~~~s~~~l~~ 52 (58)
T d1v54j_ 40 LGGTLYSLYCLGW 52 (58)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5788888877764
No 2
>d2oa4a1 a.4.12.3 (A:1-93) Uncharacterized protein SPO1678 {Silicibacter pomeroyi [TaxId: 89184]}
Probab=20.05 E-value=33 Score=22.93 Aligned_cols=34 Identities=35% Similarity=0.483 Sum_probs=22.6
Q ss_pred CCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCccccc
Q 031864 33 LPTLPPPPVPSQTRPWKATTYCRKMARNVMAMATGEAPAEVA 74 (151)
Q Consensus 33 Lp~LPp~~~~s~~~~~k~~~~~r~~ar~v~~~a~~e~~~~~~ 74 (151)
+-.|||+. ++.| +-.||.+ -|.+-..|+-+.+++
T Consensus 23 ~~dLp~~~----trRW---va~RKaa-VV~av~~Gl~S~~EA 56 (93)
T d2oa4a1 23 RADLPPAN----TRRW---VASRKIA-VVRGVIYGLITLAEA 56 (93)
T ss_dssp TTSSCCSC----CSCC---CHHHHHH-HHHHHHHTTCCHHHH
T ss_pred cccCCCcc----cccc---cHHHHHH-HHHHHHcCcCCHHHH
Confidence 44577754 4678 4456666 777778888776543
No 3
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.17 E-value=24 Score=22.77 Aligned_cols=51 Identities=10% Similarity=0.120 Sum_probs=33.7
Q ss_pred cchHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 031864 76 TELPEIVKTVQEAWDKVE--DKYAVTSLAVTVAIAVWGSTGMISAIDRLPLVP 126 (151)
Q Consensus 76 ~~~~e~v~~l~~~Wd~~e--dk~~~~~l~~~aival~~~~~vl~AId~iPLlp 126 (151)
..+++...+.-+...+.. +++.++|.=.|+.|++.+..-.-+.+.++.++.
T Consensus 64 ~~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 64 DSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp SCHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred CCHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 366777777766666654 488888999999999998887767666655443
No 4
>d2p06a1 a.204.1.3 (A:1-84) Hypothetical protein AF0060 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=12.03 E-value=80 Score=20.28 Aligned_cols=41 Identities=32% Similarity=0.549 Sum_probs=27.4
Q ss_pred CCcchhhHHHHHHHHHHHHHhcCCcccccccchHHHHHHHHHHHHhhhhhHHHH
Q 031864 46 RPWKATTYCRKMARNVMAMATGEAPAEVAATELPEIVKTVQEAWDKVEDKYAVT 99 (151)
Q Consensus 46 ~~~k~~~~~r~~ar~v~~~a~~e~~~~~~~~~~~e~v~~l~~~Wd~~edk~~~~ 99 (151)
|+|-.++.-|-++|.+-.|- ++.|.+. ++.|+.+.|.+.-+
T Consensus 30 rpwfdfseerllsrlfeemd-----------elreave--kedwenlrdelldv 70 (84)
T d2p06a1 30 RPWFDFSEERLLSRLFEEMD-----------ELREAVE--KEDWENLRDELLDV 70 (84)
T ss_dssp CHHHHSCHHHHHHHHHHHHH-----------HHHHHHH--TTCHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHHHH-----------HHHHHHH--HHHHHHHHHHHHHH
Confidence 78988888788887665443 3444443 57788888876543
No 5
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=12.01 E-value=69 Score=24.03 Aligned_cols=24 Identities=21% Similarity=0.127 Sum_probs=12.7
Q ss_pred HHHHHhhcCCCcchhhhhhhhhhe
Q 031864 114 GMISAIDRLPLVPGVLELVGIGYT 137 (151)
Q Consensus 114 ~vl~AId~iPLlp~llELVGigyt 137 (151)
.++.++-.+..-+-+-.|+|++|-
T Consensus 60 ~l~~~l~~~~~~~ils~l~~~lwP 83 (263)
T d1i5pa3 60 FLLKKVGSLIGKRILSELWGIIFP 83 (263)
T ss_dssp HHHHHHTSTTCCCCHHHHHHHHSG
T ss_pred HHHHhhhhHhHHHHHHHHHHHHcC
Confidence 344444433333445677787764
No 6
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.65 E-value=32 Score=22.00 Aligned_cols=38 Identities=5% Similarity=-0.100 Sum_probs=30.0
Q ss_pred chHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 031864 77 ELPEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTG 114 (151)
Q Consensus 77 ~~~e~v~~l~~~Wd~~edk~~~~~l~~~aival~~~~~ 114 (151)
++.++.+++.+.-++..+|..++|.=.|+.+++.++.-
T Consensus 52 ~~~~~~~~l~~~l~~l~~~~~lvGhS~GG~ia~~~a~~ 89 (268)
T d1pjaa_ 52 QVQGFREAVVPIMAKAPQGVHLICYSQGGLVCRALLSV 89 (268)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEETHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccCCeEEEEccccHHHHHHHHHHH
Confidence 56677777777777788888898988999998887654
No 7
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=8.27 E-value=44 Score=19.60 Aligned_cols=10 Identities=60% Similarity=1.016 Sum_probs=7.7
Q ss_pred hhhhhhhhhe
Q 031864 128 VLELVGIGYT 137 (151)
Q Consensus 128 llELVGigyt 137 (151)
+=||+|+||+
T Consensus 8 i~eL~~MGF~ 17 (43)
T d2g3qa1 8 VEELSGMGFT 17 (43)
T ss_dssp HHHHHTTTSC
T ss_pred HHHHHhcCCC
Confidence 3488999986
No 8
>d1wr6a1 a.7.8.1 (A:211-300) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.08 E-value=2.3e+02 Score=17.57 Aligned_cols=15 Identities=20% Similarity=0.532 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHh
Q 031864 52 TYCRKMARNVMAMAT 66 (151)
Q Consensus 52 ~~~r~~ar~v~~~a~ 66 (151)
.-|++.-+.|+.+++
T Consensus 43 ~~C~~~qp~i~~li~ 57 (90)
T d1wr6a1 43 DQCENKRRTLFKLAS 57 (90)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 568888888887775
No 9
>d2qgsa1 a.211.1.1 (A:1-216) Uncharacterized protein SE1688 {Staphylococcus epidermidis [TaxId: 1282]}
Probab=7.06 E-value=1.8e+02 Score=20.60 Aligned_cols=15 Identities=13% Similarity=0.328 Sum_probs=12.3
Q ss_pred chHHHHHHHHHHHHh
Q 031864 77 ELPEIVKTVQEAWDK 91 (151)
Q Consensus 77 ~~~e~v~~l~~~Wd~ 91 (151)
.+.+|+++|.+.|+-
T Consensus 200 ~m~~fl~~~~~Ew~~ 214 (216)
T d2qgsa1 200 FMIQYLKQFMSEWNF 214 (216)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCC
Confidence 456999999999973
No 10
>d2oyoa1 a.152.1.3 (A:10-195) Uncharacterized protein Dgeo_1446 {Deinococcus geothermalis [TaxId: 68909]}
Probab=7.00 E-value=2.2e+02 Score=18.92 Aligned_cols=65 Identities=11% Similarity=0.001 Sum_probs=31.0
Q ss_pred chHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCcchhhhhhhhhheehhhhhh
Q 031864 77 ELPEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTGMISAID--RLPLVPGVLELVGIGYTGWFAYKN 144 (151)
Q Consensus 77 ~~~e~v~~l~~~Wd~~edk~~~~~l~~~aival~~~~~vl~AId--~iPLlp~llELVGigyt~WF~yRy 144 (151)
++-++++.+++++-.+.|.+.+++--=..+-+ ...+.+++- .=.|=+.+.|+|.+-.+..--..|
T Consensus 17 ~~~~~~~~~~~~~G~vpn~~~~la~~P~~l~~---~~~~~~~l~~~~~~L~~~~rEli~l~vs~~n~C~Y 83 (186)
T d2oyoa1 17 GVRKLWAKAEANIGFVPNVFRAQAVNGEQFLA---WWNYFNLLLNKEGYLTNAERELVAVVVSGVNRCLY 83 (186)
T ss_dssp HHHHHHHHHHHHHSSCCTHHHHGGGSHHHHHH---HHHHHHHHHTSCCSSCHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHcCHHHHHH---HHHHHHHHHhcccCCCHHHHHHHHHHHHHhcCCcH
Confidence 33444444444433333444443322223333 234444552 224667888998887665443333
Done!