Query 031869
Match_columns 151
No_of_seqs 164 out of 909
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 10:06:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031869.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031869hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bl2_A V-type sodium ATP synth 100.0 1E-33 3.5E-38 219.2 10.0 144 1-147 1-148 (156)
2 2xqu_A C15_RING, ATP synthase 99.6 3.6E-15 1.2E-19 104.1 9.2 71 10-80 5-79 (82)
3 2x2v_A ATP synthase subunit C; 99.6 2.3E-15 8E-20 102.0 7.5 62 16-77 3-68 (69)
4 1wu0_A ATP synthase C chain; A 99.6 1.9E-15 6.6E-20 103.2 7.0 65 14-78 3-71 (72)
5 1a91_A F1FO ATPase subunit C; 99.5 3.2E-14 1.1E-18 98.7 8.6 66 14-79 8-77 (79)
6 2wgm_A ATP synthase subunit C, 99.5 8.5E-15 2.9E-19 103.7 5.6 68 13-81 12-83 (89)
7 2bl2_A V-type sodium ATP synth 99.4 1.7E-13 6E-18 105.7 7.6 67 13-79 89-155 (156)
8 2xnd_J ATP synthase lipid-bind 99.4 4.9E-14 1.7E-18 96.2 1.5 63 14-77 5-71 (72)
9 4f4s_A ATP synthase subunit 9, 99.1 1.6E-10 5.5E-15 79.6 6.5 66 13-79 6-75 (76)
10 2xqu_A C15_RING, ATP synthase 98.8 2.3E-09 7.9E-14 74.6 3.5 59 88-146 4-70 (82)
11 1wu0_A ATP synthase C chain; A 98.8 3.4E-09 1.2E-13 72.1 3.1 55 92-146 2-64 (72)
12 2x2v_A ATP synthase subunit C; 98.6 1.7E-08 5.7E-13 68.1 3.5 52 95-146 3-62 (69)
13 2wgm_A ATP synthase subunit C, 98.6 1.6E-08 5.4E-13 71.3 2.7 58 88-146 8-73 (89)
14 1a91_A F1FO ATPase subunit C; 98.6 5.9E-08 2E-12 67.0 4.7 54 93-146 8-69 (79)
15 2xnd_J ATP synthase lipid-bind 98.5 1.8E-08 6.1E-13 68.5 0.5 55 91-146 3-65 (72)
16 4f4s_A ATP synthase subunit 9, 96.2 0.0018 6.3E-08 44.2 2.1 57 89-146 3-67 (76)
17 1jb0_L Photosystem 1 reaction 21.2 2.7E+02 0.0091 20.9 9.2 74 28-106 50-130 (154)
No 1
>2bl2_A V-type sodium ATP synthase subunit K; V-type ATPase, K-ring, membrane rotor, sodium transporter, H ION transport, hydrolase, transmembrane; HET: LHG UMQ; 2.1A {Enterococcus hirae} PDB: 2cyd_A* 2db4_A* 3aou_A*
Probab=100.00 E-value=1e-33 Score=219.22 Aligned_cols=144 Identities=24% Similarity=0.415 Sum_probs=132.3
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Q 031869 1 MSSSFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI 80 (151)
Q Consensus 1 ~~~~~~~~~~~~~~~~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~~~~k~li~~~~~e~~~IYGlIva~li~~~~ 80 (151)
|+++|..+.-+++++++|++++++++++|++||++++|++++++.+||||+++|++++++|||+|+|||+|+++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~lGa~la~~ls~iGaa~G~~~aG~a~~g~~~~~P~~~~k~li~~~l~e~~~IYGlvva~li~~~l 80 (156)
T 2bl2_A 1 MMDYLITQNGGMVFAVLAMATATIFSGIGSAKGVGMTGEAAAALTTSQPEKFGQALILQLLPGTQGLYGFVIAFLIFINL 80 (156)
T ss_dssp CHHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHGGGHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 55666544557789999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcccchhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhhcccccCCCc---eeehHHHHHHHH-HHHhh
Q 031869 81 NPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRHPSFVFKI---GMLGITSMETDL-IALIS 147 (151)
Q Consensus 81 ~~~~~~~~~~~g~~~~~aGL~vGl~~l~Sgi~qGi~gaagi~a~a~~p~l---~~il~~~~E~~a-~~~~~ 147 (151)
+++ +++.++|.++++||++|++++.+|++||+++++++++++||||. .++..+++|+++ ++|+-
T Consensus 81 ~~~---~~~~~g~~~igagl~~Gla~lgagigiG~v~~~~i~a~arqPe~~~~~ii~~a~~Ea~ai~glvi 148 (156)
T 2bl2_A 81 GSD---MSVVQGLNFLGASLPIAFTGLFSGIAQGKVAAAGIQILAKKPEHATKGIIFAAMVETYAILGFVI 148 (156)
T ss_dssp CTT---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHTTHHHHHHHHHH
T ss_pred ccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 653 67899999999999999999999999999999999999999999 677788999998 66653
No 2
>2xqu_A C15_RING, ATP synthase C chain; membrane protein, F1FO-ATP synthase rotor, ION (PROT translocation; HET: FME CVM; 1.84A {Arthrospira platensis} PDB: 2xqs_A* 2xqt_A* 2wie_A* 2w5j_A
Probab=99.60 E-value=3.6e-15 Score=104.13 Aligned_cols=71 Identities=18% Similarity=0.271 Sum_probs=65.4
Q ss_pred chhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccchh----hhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Q 031869 10 TAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPEL----VMKSIVPVVMAGVLGIYGLIIAVIISTGI 80 (151)
Q Consensus 10 ~~~~~~~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~~----~~k~li~~~~~e~~~IYGlIva~li~~~~ 80 (151)
+...+.++|++++++++++|+++|+|+++++++++.+||||. ++++++..+|+|+++||++++++++.+..
T Consensus 5 ~~~~~~~igagl~~Gla~igagig~G~~~~~~i~a~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~ll~f~~ 79 (82)
T 2xqu_A 5 LTTAASVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVLLFAN 79 (82)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344589999999999999999999999999999999999995 66699999999999999999999998764
No 3
>2x2v_A ATP synthase subunit C; membrane protein, ION transport, ATP synthesis, transmembran CF(0), membrane, transport, C-ring rotor; HET: FME DPV; 2.50A {Bacillus pseudofirmus OF4}
Probab=99.60 E-value=2.3e-15 Score=101.97 Aligned_cols=62 Identities=26% Similarity=0.297 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccchhhhh----hhHHHHHHHHHHHHHHHHHHHHH
Q 031869 16 FLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMK----SIVPVVMAGVLGIYGLIIAVIIS 77 (151)
Q Consensus 16 ~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~~~~k----~li~~~~~e~~~IYGlIva~li~ 77 (151)
++|++++++++++|+++|+|+++++++++.+||||.+.| +++..+|+|+++||++++++++.
T Consensus 3 ~igagl~~Gla~igagig~G~~~~~~i~~~arqPe~~~~l~~~~ii~~al~Ea~ai~~lvia~lll 68 (69)
T 2x2v_A 3 FLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLIL 68 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999996555 99999999999999999999975
No 4
>1wu0_A ATP synthase C chain; ATPase, membrane protein, hydrogen ION transport, hydrolase; NMR {Bacillus SP}
Probab=99.60 E-value=1.9e-15 Score=103.16 Aligned_cols=65 Identities=25% Similarity=0.297 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccchhhhh----hhHHHHHHHHHHHHHHHHHHHHHh
Q 031869 14 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMK----SIVPVVMAGVLGIYGLIIAVIIST 78 (151)
Q Consensus 14 ~~~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~~~~k----~li~~~~~e~~~IYGlIva~li~~ 78 (151)
+.++|++++++++++|+++|+|+++++++++.+||||.+.| +++..+|+|+++||++++++++.+
T Consensus 3 ~~~igagl~~Gla~igagig~G~~~~~~~~~~arqPe~~~~l~~~~ii~~al~Ea~ai~~lvia~lllf 71 (72)
T 1wu0_A 3 LGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIARQPELRPVLQTTMFIGVALVEALPIIGVVFSFIYLG 71 (72)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999996555 999999999999999999999864
No 5
>1a91_A F1FO ATPase subunit C; membrane protein, hydrogen ION transport; NMR {Escherichia coli} SCOP: f.17.1.1 PDB: 1c0v_A 1c17_A 1c99_A 1qo1_K 1aty_A 1l6t_A 1ijp_A
Probab=99.53 E-value=3.2e-14 Score=98.71 Aligned_cols=66 Identities=14% Similarity=0.236 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccch----hhhhhhHHHHHHHHHHHHHHHHHHHHHhc
Q 031869 14 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPE----LVMKSIVPVVMAGVLGIYGLIIAVIISTG 79 (151)
Q Consensus 14 ~~~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~----~~~k~li~~~~~e~~~IYGlIva~li~~~ 79 (151)
+..+++++++|++++|+++|+|+++++++++.+|||| +++++++..+|+|+++||++++++++.+.
T Consensus 8 m~~~~a~l~~Gla~igagig~G~v~~~~i~~~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~lllf~ 77 (79)
T 1a91_A 8 LLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFA 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999999 45579999999999999999999998764
No 6
>2wgm_A ATP synthase subunit C, sodium ION specific; F1FO-ATP synthase rotor, sodium-motive force, cell inner membrane, CF(0), membrane, transport; HET: F09; 2.35A {Ilyobacter tartaricus} PDB: 1yce_A*
Probab=99.53 E-value=8.5e-15 Score=103.70 Aligned_cols=68 Identities=22% Similarity=0.316 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccchh----hhhhhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 031869 13 FFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPEL----VMKSIVPVVMAGVLGIYGLIIAVIISTGIN 81 (151)
Q Consensus 13 ~~~~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~~----~~k~li~~~~~e~~~IYGlIva~li~~~~~ 81 (151)
.+.++|+++++ ++++|+++|+|+++++++++.+||||. ++++++..+|+|+++||++++++++.+..+
T Consensus 12 ~~~~igaGla~-la~iGagig~G~v~~~ai~a~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~lllf~~p 83 (89)
T 2wgm_A 12 AASAVGAGTAM-IAGIGPGVGQGYAAGKAVESVARQPEAKGDIISTMVLGQAVAESTGIYSLVIALILLYANP 83 (89)
T ss_dssp HHHHHHHHHHG-GGGHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCchHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999 999999999999999999999999995 899999999999999999999999988643
No 7
>2bl2_A V-type sodium ATP synthase subunit K; V-type ATPase, K-ring, membrane rotor, sodium transporter, H ION transport, hydrolase, transmembrane; HET: LHG UMQ; 2.1A {Enterococcus hirae} PDB: 2cyd_A* 2db4_A* 3aou_A*
Probab=99.44 E-value=1.7e-13 Score=105.74 Aligned_cols=67 Identities=21% Similarity=0.349 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhc
Q 031869 13 FFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTG 79 (151)
Q Consensus 13 ~~~~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~~~~k~li~~~~~e~~~IYGlIva~li~~~ 79 (151)
.+.++|++++++++++|+++|+|+++++++++.+||||.++|+++..+|+|+++||++++++++.++
T Consensus 89 g~~~igagl~~Gla~lgagigiG~v~~~~i~a~arqPe~~~~~ii~~a~~Ea~ai~glvia~ll~~~ 155 (156)
T 2bl2_A 89 GLNFLGASLPIAFTGLFSGIAQGKVAAAGIQILAKKPEHATKGIIFAAMVETYAILGFVISFLLVLN 155 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3889999999999999999999999999999999999999999999999999999999999998764
No 8
>2xnd_J ATP synthase lipid-binding protein, mitochondrial; ATP phosphorylase (H+ transporting), ATP synthesis, F1FO ATP synthase, hydrolase, ION transport; HET: ANP; 3.50A {Bos taurus}
Probab=99.40 E-value=4.9e-14 Score=96.21 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccchhh----hhhhHHHHHHHHHHHHHHHHHHHHH
Q 031869 14 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELV----MKSIVPVVMAGVLGIYGLIIAVIIS 77 (151)
Q Consensus 14 ~~~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~~~----~k~li~~~~~e~~~IYGlIva~li~ 77 (151)
+.++|+++++ ++++|+++|+|+++++++++.+||||.+ +++++..+|+|+++||+++++++++
T Consensus 5 ~~~igaGLa~-l~~~gagig~G~~~~~~i~~~arqPe~~~~l~~~~~i~~al~Ea~~i~~lvia~lll 71 (72)
T 2xnd_J 5 AKFIGAGAAT-VGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLIL 71 (72)
T ss_dssp TTTTTTTGGG-GGGHHHHHHHHHHHHHHHHHSSSCSCCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4568899999 9999999999999999999999999854 5789999999999999999999874
No 9
>4f4s_A ATP synthase subunit 9, mitochondrial; C10 ring, F1FO ATP synthase, oligomycin, membr protein-antibiotic complex; HET: FME EFO; 1.90A {Saccharomyces cerevisiae} PDB: 2wpd_J* 2xok_K* 3u2y_K* 3u32_K* 3ud0_K* 3zry_J* 3u2f_K*
Probab=99.10 E-value=1.6e-10 Score=79.58 Aligned_cols=66 Identities=17% Similarity=0.310 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcccccchh----hhhhhHHHHHHHHHHHHHHHHHHHHHhc
Q 031869 13 FFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPEL----VMKSIVPVVMAGVLGIYGLIIAVIISTG 79 (151)
Q Consensus 13 ~~~~lGa~la~gla~iGsa~G~g~ag~a~~~a~~~~P~~----~~k~li~~~~~e~~~IYGlIva~li~~~ 79 (151)
.-.++|++++. ++..|+++|+|.+..+.+.+..||||. |+.+++..++.|+.+||+|+++|++++.
T Consensus 6 aak~IGaGlA~-ig~~G~giGiG~vfg~~i~~~aRnP~~~~~l~~~~ilG~Al~Ea~glf~LvvA~lllFa 75 (76)
T 4f4s_A 6 AAKYIGAGIST-IGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLFG 75 (76)
T ss_dssp HHHHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHH-HHcchHHHhHHHHHHHHHHHHhcChhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45789999998 889999999999999999999999985 5668999999999999999999998753
No 10
>2xqu_A C15_RING, ATP synthase C chain; membrane protein, F1FO-ATP synthase rotor, ION (PROT translocation; HET: FME CVM; 1.84A {Arthrospira platensis} PDB: 2xqs_A* 2xqt_A* 2wie_A* 2w5j_A
Probab=98.81 E-value=2.3e-09 Score=74.55 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=53.7
Q ss_pred chhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhhcccccCCCc-------eeehHHHHHHHH-HHHh
Q 031869 88 YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRHPSFVFKI-------GMLGITSMETDL-IALI 146 (151)
Q Consensus 88 ~~~~g~~~~~aGL~vGl~~l~Sgi~qGi~gaagi~a~a~~p~l-------~~il~~~~E~~a-~~~~ 146 (151)
.+.+++.++++|+++|++++.||++||+++++++++++||||. .++..+++|+++ ++++
T Consensus 4 ~~~~~~~~igagl~~Gla~igagig~G~~~~~~i~a~arqPe~~~~l~~~~ii~~al~Ea~ai~glv 70 (82)
T 2xqu_A 4 NLTTAASVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLV 70 (82)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999995 677799999998 6655
No 11
>1wu0_A ATP synthase C chain; ATPase, membrane protein, hydrogen ION transport, hydrolase; NMR {Bacillus SP}
Probab=98.76 E-value=3.4e-09 Score=72.07 Aligned_cols=55 Identities=20% Similarity=0.353 Sum_probs=49.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhhhcccccCCCc-------eeehHHHHHHHH-HHHh
Q 031869 92 GYAHLSSGLACGLAGLSAGMAIGIVGDAGVRHPSFVFKI-------GMLGITSMETDL-IALI 146 (151)
Q Consensus 92 g~~~~~aGL~vGl~~l~Sgi~qGi~gaagi~a~a~~p~l-------~~il~~~~E~~a-~~~~ 146 (151)
++.++++|+++|++++.||++||+++++++++++||||. .++..+++|+++ ++++
T Consensus 2 ~~~~igagl~~Gla~igagig~G~~~~~~~~~~arqPe~~~~l~~~~ii~~al~Ea~ai~~lv 64 (72)
T 1wu0_A 2 SLGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIARQPELRPVLQTTMFIGVALVEALPIIGVV 64 (72)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTTHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999996 567789999998 6654
No 12
>2x2v_A ATP synthase subunit C; membrane protein, ION transport, ATP synthesis, transmembran CF(0), membrane, transport, C-ring rotor; HET: FME DPV; 2.50A {Bacillus pseudofirmus OF4}
Probab=98.64 E-value=1.7e-08 Score=68.07 Aligned_cols=52 Identities=23% Similarity=0.395 Sum_probs=47.3
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhcccccCCCc-------eeehHHHHHHHH-HHHh
Q 031869 95 HLSSGLACGLAGLSAGMAIGIVGDAGVRHPSFVFKI-------GMLGITSMETDL-IALI 146 (151)
Q Consensus 95 ~~~aGL~vGl~~l~Sgi~qGi~gaagi~a~a~~p~l-------~~il~~~~E~~a-~~~~ 146 (151)
++++|+.+|++++.||++||+++++++++++||||. .++..+++|+++ ++++
T Consensus 3 ~igagl~~Gla~igagig~G~~~~~~i~~~arqPe~~~~l~~~~ii~~al~Ea~ai~~lv 62 (69)
T 2x2v_A 3 FLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIV 62 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999995 567799999998 6654
No 13
>2wgm_A ATP synthase subunit C, sodium ION specific; F1FO-ATP synthase rotor, sodium-motive force, cell inner membrane, CF(0), membrane, transport; HET: F09; 2.35A {Ilyobacter tartaricus} PDB: 1yce_A*
Probab=98.60 E-value=1.6e-08 Score=71.35 Aligned_cols=58 Identities=19% Similarity=0.244 Sum_probs=52.6
Q ss_pred chhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhhcccccCCCc-------eeehHHHHHHHH-HHHh
Q 031869 88 YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRHPSFVFKI-------GMLGITSMETDL-IALI 146 (151)
Q Consensus 88 ~~~~g~~~~~aGL~vGl~~l~Sgi~qGi~gaagi~a~a~~p~l-------~~il~~~~E~~a-~~~~ 146 (151)
++.+++.++++|+++ ++++.+|++||+++++++++++||||. .++..+++|+++ ++++
T Consensus 8 ~~~~~~~~igaGla~-la~iGagig~G~v~~~ai~a~arqPe~~~~l~~~~ii~~al~Ea~ai~glv 73 (89)
T 2wgm_A 8 TVVLAASAVGAGTAM-IAGIGPGVGQGYAAGKAVESVARQPEAKGDIISTMVLGQAVAESTGIYSLV 73 (89)
T ss_dssp HHHHHHHHHHHHHHG-GGGHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCchHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999 999999999999999999999999995 677799999998 6654
No 14
>1a91_A F1FO ATPase subunit C; membrane protein, hydrogen ION transport; NMR {Escherichia coli} SCOP: f.17.1.1 PDB: 1c0v_A 1c17_A 1c99_A 1qo1_K 1aty_A 1l6t_A 1ijp_A
Probab=98.57 E-value=5.9e-08 Score=67.02 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=48.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhhhcccccCCCc-------eeehHHHHHHHH-HHHh
Q 031869 93 YAHLSSGLACGLAGLSAGMAIGIVGDAGVRHPSFVFKI-------GMLGITSMETDL-IALI 146 (151)
Q Consensus 93 ~~~~~aGL~vGl~~l~Sgi~qGi~gaagi~a~a~~p~l-------~~il~~~~E~~a-~~~~ 146 (151)
..++++++.+|++++.+|++||+++++++++++||||. .++..+++|+++ ++++
T Consensus 8 m~~~~a~l~~Gla~igagig~G~v~~~~i~~~arqPe~~~~l~~~~ii~~al~Ea~ai~glv 69 (79)
T 1a91_A 8 LLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVG 69 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999996 467789999998 6654
No 15
>2xnd_J ATP synthase lipid-binding protein, mitochondrial; ATP phosphorylase (H+ transporting), ATP synthesis, F1FO ATP synthase, hydrolase, ION transport; HET: ANP; 3.50A {Bos taurus}
Probab=98.49 E-value=1.8e-08 Score=68.50 Aligned_cols=55 Identities=18% Similarity=0.169 Sum_probs=49.2
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHhhhhhhhhcccccCCCc-------eeehHHHHHHHH-HHHh
Q 031869 91 DGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRHPSFVFKI-------GMLGITSMETDL-IALI 146 (151)
Q Consensus 91 ~g~~~~~aGL~vGl~~l~Sgi~qGi~gaagi~a~a~~p~l-------~~il~~~~E~~a-~~~~ 146 (151)
+++.++++||++ ++++.+|++||+++++++++++||||. .++..+++|+++ ++++
T Consensus 3 ~~~~~igaGLa~-l~~~gagig~G~~~~~~i~~~arqPe~~~~l~~~~~i~~al~Ea~~i~~lv 65 (72)
T 2xnd_J 3 TAAKFIGAGAAT-VGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLM 65 (72)
T ss_dssp TTTTTTTTTGGG-GGGHHHHHHHHHHHHHHHHHSSSCSCCCCCCSSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 467789999999 999999999999999999999999987 377799999998 6664
No 16
>4f4s_A ATP synthase subunit 9, mitochondrial; C10 ring, F1FO ATP synthase, oligomycin, membr protein-antibiotic complex; HET: FME EFO; 1.90A {Saccharomyces cerevisiae} PDB: 2wpd_J* 2xok_K* 3u2y_K* 3u32_K* 3ud0_K* 3zry_J* 3u2f_K*
Probab=96.25 E-value=0.0018 Score=44.23 Aligned_cols=57 Identities=26% Similarity=0.274 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhhcccccCCCc-------eeehHHHHHHHH-HHHh
Q 031869 89 LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRHPSFVFKI-------GMLGITSMETDL-IALI 146 (151)
Q Consensus 89 ~~~g~~~~~aGL~vGl~~l~Sgi~qGi~gaagi~a~a~~p~l-------~~il~~~~E~~a-~~~~ 146 (151)
+.++..+.++|+++ ++...+|+.||.+..+.+.+.+|||+. .++=.++.|... |+|.
T Consensus 3 lv~aak~IGaGlA~-ig~~G~giGiG~vfg~~i~~~aRnP~~~~~l~~~~ilG~Al~Ea~glf~Lv 67 (76)
T 4f4s_A 3 LVLAAKYIGAGIST-IGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLM 67 (76)
T ss_dssp HHHHHHHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHcchHHHhHHHHHHHHHHHHhcChhHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 34677889999998 888899999999999999999999988 333377888765 5553
No 17
>1jb0_L Photosystem 1 reaction centre subunit XI; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.31.1.1 PDB: 3pcq_L*
Probab=21.19 E-value=2.7e+02 Score=20.91 Aligned_cols=74 Identities=20% Similarity=0.281 Sum_probs=45.8
Q ss_pred hhhHHHHHHHHHHHhhcccccchhh------hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcccchhhHHHHHHHHh
Q 031869 28 MGAAYGTAKSGVGVASMGVMRPELV------MKSIVPVVMAGVLGIYGLIIAVIISTGINPK-AKSYYLFDGYAHLSSGL 100 (151)
Q Consensus 28 iGsa~G~g~ag~a~~~a~~~~P~~~------~k~li~~~~~e~~~IYGlIva~li~~~~~~~-~~~~~~~~g~~~~~aGL 100 (151)
+|-|-|.-..|-=..-.=.|++|.- ...=+..++.-.+.+||.+ ..+.++. .+.....++|.-|++|.
T Consensus 50 iGmAHGYfL~GPF~~lGPLRnte~a~laGllsaiglv~IlT~~LsiYg~~-----~f~~~~~~~~~l~t~~gWs~Ft~GF 124 (154)
T 1jb0_L 50 VGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLV-----SFQKGGSSSDPLKTSEGWSQFTAGF 124 (154)
T ss_dssp HHHHHHHHHTHHHHHHSTTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTSSCCCSSCGGGSHHHHHHHHHHH
T ss_pred hhhcceeeeechhHhcccCcCcchHHHHHHHHHHHHHHHHHHHHHHhccC-----ccCCCCCCcccccCcccHhHcccce
Confidence 4456667777776666777787742 1222344455567778865 2332211 23355679999999999
Q ss_pred HHHHHH
Q 031869 101 ACGLAG 106 (151)
Q Consensus 101 ~vGl~~ 106 (151)
.+|=++
T Consensus 125 ~iGg~G 130 (154)
T 1jb0_L 125 FVGAMG 130 (154)
T ss_dssp HHHHHH
T ss_pred eeeccc
Confidence 888554
Done!