Query 031875
Match_columns 151
No_of_seqs 110 out of 215
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 10:14:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fxk_C Protein (prefoldin); ar 99.9 3.1E-25 1E-29 165.8 10.0 94 53-150 3-96 (133)
2 2zdi_C Prefoldin subunit alpha 99.9 1.4E-23 4.8E-28 160.6 6.1 97 49-150 7-106 (151)
3 2zqm_A Prefoldin beta subunit 96.4 0.0065 2.2E-07 43.1 5.7 72 52-150 7-78 (117)
4 1fxk_A Prefoldin; archaeal pro 95.9 0.034 1.2E-06 38.7 7.6 70 54-150 4-73 (107)
5 3ci9_A Heat shock factor-bindi 78.6 2 6.7E-05 27.0 3.2 34 55-88 14-47 (48)
6 4dnd_A Syntaxin-10, SYN10; str 62.1 18 0.00062 26.5 5.8 45 48-92 35-94 (130)
7 2q6q_A Spindle POLE BODY compo 55.3 20 0.00069 24.2 4.5 38 51-88 24-61 (74)
8 2xp1_A SPT6; transcription, IW 54.7 18 0.00063 27.7 4.9 53 88-144 23-84 (178)
9 3swf_A CGMP-gated cation chann 49.6 20 0.00069 24.3 3.8 46 37-82 4-49 (74)
10 2yy0_A C-MYC-binding protein; 49.0 31 0.001 21.6 4.4 43 35-77 4-49 (53)
11 3swy_A Cyclic nucleotide-gated 47.7 26 0.00088 21.6 3.8 43 38-80 3-45 (46)
12 3hsq_A Acyl-[acyl-carrier-prot 35.1 28 0.00095 27.0 3.2 68 27-96 183-250 (259)
13 1q08_A Zn(II)-responsive regul 33.2 1E+02 0.0035 20.1 6.2 33 65-97 39-71 (99)
14 3hh0_A Transcriptional regulat 32.6 1.4E+02 0.0048 21.5 7.2 28 70-97 85-112 (146)
15 1ykh_B RNA polymerase II holoe 30.7 1.2E+02 0.004 22.0 5.8 52 37-88 72-126 (132)
16 3mq9_A Bone marrow stromal ant 30.6 1.3E+02 0.0046 25.0 6.9 58 34-92 357-424 (471)
17 3gp4_A Transcriptional regulat 29.0 1.3E+02 0.0046 21.5 5.9 29 68-96 84-112 (142)
18 1yke_B RNA polymerase II holoe 28.1 1.3E+02 0.0045 22.4 5.8 48 38-85 73-123 (151)
19 2xz3_A Maltose ABC transporter 26.2 2E+02 0.0069 23.8 7.3 55 37-92 347-406 (463)
20 3vmx_A Voltage-gated hydrogen 25.7 1.2E+02 0.0043 18.7 5.5 41 57-97 3-43 (48)
21 3qf7_D MRE11; ABC-ATPase, ATPa 25.4 54 0.0019 20.2 2.6 37 29-65 4-40 (50)
22 3ljm_A Coil Ser L9C; de novo d 23.5 73 0.0025 17.7 2.7 20 73-92 9-28 (31)
23 2zqm_A Prefoldin beta subunit 23.4 1.6E+02 0.0056 19.7 5.2 42 48-89 67-108 (117)
24 3shg_B VBHA; ampylation, adeny 23.2 59 0.002 21.2 2.6 33 27-60 25-57 (61)
25 3gpv_A Transcriptional regulat 22.2 1.2E+02 0.0041 21.9 4.5 34 64-97 94-127 (148)
26 1p68_A De novo designed protei 21.4 39 0.0013 23.5 1.5 25 34-58 40-66 (102)
27 2ovc_A Potassium voltage-gated 21.4 82 0.0028 18.1 2.7 25 68-92 6-30 (33)
28 2p90_A Hypothetical protein CG 21.2 1.4E+02 0.005 24.5 5.3 68 26-97 189-265 (319)
29 1kcq_A Gelsolin, brevin, ADF, 20.8 43 0.0015 22.8 1.6 14 122-135 36-49 (104)
30 2w6a_A ARF GTPase-activating p 20.6 1.8E+02 0.0063 18.9 5.5 44 38-86 12-55 (63)
No 1
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=99.92 E-value=3.1e-25 Score=165.84 Aligned_cols=94 Identities=20% Similarity=0.282 Sum_probs=90.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhhcCCCceeEEEEccccceeeeEeCCCCeEEEeccc
Q 031875 53 LAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCLDIVATLQAKKEGGEALTADFEVSEGIFSRARIEDTDSVCLWLGA 132 (151)
Q Consensus 53 l~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikktLe~V~~L~~k~~~~e~~et~f~L~d~lyakA~I~~~d~V~LWLGA 132 (151)
+++|++++++|+++..++.+++..|..+||++++++++|+.|.. .++.+++|||++++|++|+|+++++|++|||+
T Consensus 3 ~~~l~~~~q~l~~~~~~l~~~~~~l~~~i~e~~~~~e~l~~l~~----~~~~~~lvplg~~~yv~a~i~~~~~V~v~lG~ 78 (133)
T 1fxk_C 3 LAEIVAQLNIYQSQVELIQQQMEAVRATISELEILEKTLSDIQG----KDGSETLVPVGAGSFIKAELKDTSEVIMSVGA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----CTTCEEEEEEETTEEEEEECCSTTEEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----CCCCeEEEEcCCCcEEEEEECCCCEEEEEcCC
Confidence 67899999999999999999999999999999999999999975 25799999999999999999999999999999
Q ss_pred ceeeeecHHHHhhhcccC
Q 031875 133 NVMLEYSCDEVYLFFPTS 150 (151)
Q Consensus 133 nVMlEY~ldEA~elL~kn 150 (151)
||||||+++||+++|++|
T Consensus 79 g~~vE~~~~eA~~~l~~r 96 (133)
T 1fxk_C 79 GVAIKKNFEDAMESIKSQ 96 (133)
T ss_dssp TEEEEEEHHHHHHHHHHH
T ss_pred CEEEEeeHHHHHHHHHHH
Confidence 999999999999999876
No 2
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=99.88 E-value=1.4e-23 Score=160.55 Aligned_cols=97 Identities=20% Similarity=0.240 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHH---HhccccHHHHHHHHHHHHhhhcCCCceeEEEEccccceeeeEeCCCCe
Q 031875 49 VNSALAFLQERLQQYKLVEMKLLAQQRDL---QAKIPDIEKCLDIVATLQAKKEGGEALTADFEVSEGIFSRARIEDTDS 125 (151)
Q Consensus 49 ~e~~l~~l~e~~~KYk~mE~~l~~~~~~L---~~kIPdikktLe~V~~L~~k~~~~e~~et~f~L~d~lyakA~I~~~d~ 125 (151)
.++-+++|.+.+++|+++..++.+++..| ..++||++++++.|+.|.. ++.+++|+|++++|++|+|+++++
T Consensus 7 ~~~~l~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~l~~l~~-----~~~~ilvplg~~~yv~g~i~~~~~ 81 (151)
T 2zdi_C 7 NNKELEKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKKIEE-----EKPEILVPIGAGSFLKGVIVDKNN 81 (151)
T ss_dssp STTHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-----SSCEEEEECSSSCEEEEECSCTTE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----CCceEEEEcCCCeEEEEEECCCCE
Confidence 34568999999999999999999999999 9999999999999998842 568999999999999999999999
Q ss_pred EEEecccceeeeecHHHHhhhcccC
Q 031875 126 VCLWLGANVMLEYSCDEVYLFFPTS 150 (151)
Q Consensus 126 V~LWLGAnVMlEY~ldEA~elL~kn 150 (151)
|+||||+||||||+++||+++|++|
T Consensus 82 V~v~lG~g~~vE~~~~eA~~~l~~r 106 (151)
T 2zdi_C 82 AIVSVGSGYAVERSIDEAISFLEKR 106 (151)
T ss_dssp EEEEEETTEEEEEEHHHHHHHHHHH
T ss_pred EEEEeCCCeEEEecHHHHHHHHHHH
Confidence 9999999999999999999999876
No 3
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=96.39 E-value=0.0065 Score=43.07 Aligned_cols=72 Identities=17% Similarity=0.281 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhhcCCCceeEEEEccccceeeeEeCCCCeEEEecc
Q 031875 52 ALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCLDIVATLQAKKEGGEALTADFEVSEGIFSRARIEDTDSVCLWLG 131 (151)
Q Consensus 52 ~l~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikktLe~V~~L~~k~~~~e~~et~f~L~d~lyakA~I~~~d~V~LWLG 131 (151)
-+..+...|++++.--..+.+++..+...+-+++.+++-+..|. +..+||.-+|
T Consensus 7 e~Q~~i~~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~--------------------------~d~~vy~~iG 60 (117)
T 2zqm_A 7 QVQAMLGQLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLP--------------------------DDAVVYKTVG 60 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--------------------------TTCCEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------------------------CCcHhHHHhh
Confidence 35566667777777778888888889888888888888777662 2235666666
Q ss_pred cceeeeecHHHHhhhcccC
Q 031875 132 ANVMLEYSCDEVYLFFPTS 150 (151)
Q Consensus 132 AnVMlEY~ldEA~elL~kn 150 (151)
+|.|+-+.+||...|+++
T Consensus 61 -~vfv~~~~~ea~~~L~~~ 78 (117)
T 2zqm_A 61 -TLIVKTTKDKAVAELKEK 78 (117)
T ss_dssp -TEEEEECHHHHHHHHHHH
T ss_pred -HHHhhccHHHHHHHHHHH
Confidence 999999999999998765
No 4
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=95.94 E-value=0.034 Score=38.73 Aligned_cols=70 Identities=17% Similarity=0.236 Sum_probs=51.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhhcCCCceeEEEEccccceeeeEeCCCCeEEEecccc
Q 031875 54 AFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCLDIVATLQAKKEGGEALTADFEVSEGIFSRARIEDTDSVCLWLGAN 133 (151)
Q Consensus 54 ~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikktLe~V~~L~~k~~~~e~~et~f~L~d~lyakA~I~~~d~V~LWLGAn 133 (151)
+.....|++++.--..+.+++..+...+-+++.+++-+..|. +..+||--+| +
T Consensus 4 Q~~i~~f~~lq~~~~~l~~q~~~l~~~~~e~~~~~~EL~~l~--------------------------~d~~vy~~iG-~ 56 (107)
T 1fxk_A 4 QHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAA--------------------------DDAEVYKSSG-N 56 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--------------------------TTCCEEEEET-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------------------------CCchHHHHHh-H
Confidence 344455566666666777788888888888888888877761 2234666666 8
Q ss_pred eeeeecHHHHhhhcccC
Q 031875 134 VMLEYSCDEVYLFFPTS 150 (151)
Q Consensus 134 VMlEY~ldEA~elL~kn 150 (151)
|+|+-+.+||...|.++
T Consensus 57 vfv~~~~~e~~~~L~~~ 73 (107)
T 1fxk_A 57 ILIRVAKDELTEELQEK 73 (107)
T ss_dssp EEEEECHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHH
Confidence 99999999999988765
No 5
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=78.59 E-value=2 Score=26.98 Aligned_cols=34 Identities=21% Similarity=0.512 Sum_probs=27.3
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhccccHHHHH
Q 031875 55 FLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCL 88 (151)
Q Consensus 55 ~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikktL 88 (151)
.|+.+-.||+.|-.++..|...+-.+|.|+++++
T Consensus 14 LL~qmq~kFq~mS~~I~~riDdM~~RIDdLE~si 47 (48)
T 3ci9_A 14 LLQQMQDKFQTISDQIIGRIDDMSSRIDDLEKNI 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence 4556667888999999999999999999999886
No 6
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=62.12 E-value=18 Score=26.50 Aligned_cols=45 Identities=20% Similarity=0.292 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHHhHHHH---------------HHHHHHHHHHHHhccccHHHHHHHHH
Q 031875 48 DVNSALAFLQERLQQYKLV---------------EMKLLAQQRDLQAKIPDIEKCLDIVA 92 (151)
Q Consensus 48 ~~e~~l~~l~e~~~KYk~m---------------E~~l~~~~~~L~~kIPdikktLe~V~ 92 (151)
+++..+..++-.|++|..+ -..|...+..+...|-|+++++.+|+
T Consensus 35 EVq~sl~~l~~l~~~w~~l~~~~~~~s~~E~~~~~~EL~~~l~sie~dLeDLe~sI~ivE 94 (130)
T 4dnd_A 35 EVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVE 94 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6888889999999998633 23467788889999999999999987
No 7
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=55.30 E-value=20 Score=24.16 Aligned_cols=38 Identities=37% Similarity=0.455 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhccccHHHHH
Q 031875 51 SALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCL 88 (151)
Q Consensus 51 ~~l~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikktL 88 (151)
-++..|+..+-||--|-..|..+...++.++.++.|-+
T Consensus 24 vlvgslR~KLiKYtelnKKLe~~~~~~q~s~~~l~k~~ 61 (74)
T 2q6q_A 24 KIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKL 61 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhc
Confidence 35678899999999999999999999999998887643
No 8
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=54.70 E-value=18 Score=27.71 Aligned_cols=53 Identities=13% Similarity=0.190 Sum_probs=38.2
Q ss_pred HHHHHHHHhhhc--------CCCceeEEEEccccceeeeEeCCCCeEEEecccceeeee-cHHHHh
Q 031875 88 LDIVATLQAKKE--------GGEALTADFEVSEGIFSRARIEDTDSVCLWLGANVMLEY-SCDEVY 144 (151)
Q Consensus 88 Le~V~~L~~k~~--------~~e~~et~f~L~d~lyakA~I~~~d~V~LWLGAnVMlEY-~ldEA~ 144 (151)
.++.++|+.+.+ +++.+...|.++|++|.+..|...++. ||+|-. +| +|||=+
T Consensus 23 ~qAe~~L~~~~G~~liRPSsk~~~ltit~Kv~d~~~~Hi~I~E~~k~-l~ig~~---~fedLDElI 84 (178)
T 2xp1_A 23 TESENYLRSSTDDFLIRKGSRHGYCVLVIKFASDVFVHMKIEEHSEH-YTCSNK---HFEDIDEVI 84 (178)
T ss_dssp HHHHHHHHHSSCCEEEEECSSTTEEEEEEEEETTEEEEEEEEECSSC-EEETTE---EESSHHHHH
T ss_pred HHHHHHHhcCCCCEEEeecCCCCcEEEEEEECCCcEEEEEEEECCCE-EEECCc---EECCHHHHH
Confidence 355666665411 234599999999999999999988874 588865 67 666643
No 9
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=49.64 E-value=20 Score=24.29 Aligned_cols=46 Identities=11% Similarity=0.209 Sum_probs=27.2
Q ss_pred cHHHHhccCCcCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccc
Q 031875 37 DVQTFLSQLDLDVNSALAFLQERLQQYKLVEMKLLAQQRDLQAKIP 82 (151)
Q Consensus 37 dV~~~~~~~~~~~e~~l~~l~e~~~KYk~mE~~l~~~~~~L~~kIP 82 (151)
|+++-+.+-+++++..=.+|.-++..|.-....|.||...|..++-
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~ 49 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLK 49 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4555554322344444446666667777777777777777766543
No 10
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=49.04 E-value=31 Score=21.58 Aligned_cols=43 Identities=12% Similarity=0.117 Sum_probs=21.5
Q ss_pred cccHHHHhc--cCC-cCHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 031875 35 VEDVQTFLS--QLD-LDVNSALAFLQERLQQYKLVEMKLLAQQRDL 77 (151)
Q Consensus 35 iedV~~~~~--~~~-~~~e~~l~~l~e~~~KYk~mE~~l~~~~~~L 77 (151)
+|-|..+++ .|. .+++......+++-+||..+...+..-..+|
T Consensus 4 lefIk~~LG~~~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 4 LDFLKHHLGAATPENPEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp ------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567776 554 5787777777777777776665555444443
No 11
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=47.66 E-value=26 Score=21.63 Aligned_cols=43 Identities=16% Similarity=0.303 Sum_probs=26.0
Q ss_pred HHHHhccCCcCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 031875 38 VQTFLSQLDLDVNSALAFLQERLQQYKLVEMKLLAQQRDLQAK 80 (151)
Q Consensus 38 V~~~~~~~~~~~e~~l~~l~e~~~KYk~mE~~l~~~~~~L~~k 80 (151)
+++-+..-+++++..=.+|.-++..|......|.||...|..+
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~~ 45 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQ 45 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444433223444444566666777888888888887777654
No 12
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=35.07 E-value=28 Score=27.00 Aligned_cols=68 Identities=10% Similarity=0.041 Sum_probs=44.0
Q ss_pred CCCCcccccccHHHHhccCCcCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHh
Q 031875 27 RGIPAAQFVEDVQTFLSQLDLDVNSALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCLDIVATLQA 96 (151)
Q Consensus 27 rgIP~A~FiedV~~~~~~~~~~~e~~l~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikktLe~V~~L~~ 96 (151)
.|.|.-..--++. -+...+-+ ++.++.++..|..+-.....+.+.+..|+.++|+....-.++++++.
T Consensus 183 ~G~pa~~~~~~~~-g~~r~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 250 (259)
T 3hsq_A 183 DGNPSTVVGLNSV-GMKRAGFS-PEVRNAIKHAYKVIYHSGISTRKALDELEASGNLIEQVKYIIKFFRD 250 (259)
T ss_dssp ETTTTEEEEECHH-HHHHTTCC-HHHHHHHHHHHHHHHSSSSCHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred eccCcEEEeeccc-ceeeCCCC-HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 3566433333333 34444223 33566777777776555557888999999999888888888888853
No 13
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=33.24 E-value=1e+02 Score=20.12 Aligned_cols=33 Identities=9% Similarity=0.175 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHhh
Q 031875 65 LVEMKLLAQQRDLQAKIPDIEKCLDIVATLQAK 97 (151)
Q Consensus 65 ~mE~~l~~~~~~L~~kIPdikktLe~V~~L~~k 97 (151)
.+..-|.+++..+..+|-+++..++.+..+...
T Consensus 39 ~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~~~~ 71 (99)
T 1q08_A 39 ESKGIVQERLQEVEARIAELQSMQRSLQRLNDA 71 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678888889999999999999998888765
No 14
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=32.64 E-value=1.4e+02 Score=21.53 Aligned_cols=28 Identities=25% Similarity=0.239 Sum_probs=16.5
Q ss_pred HHHHHHHHHhccccHHHHHHHHHHHHhh
Q 031875 70 LLAQQRDLQAKIPDIEKCLDIVATLQAK 97 (151)
Q Consensus 70 l~~~~~~L~~kIPdikktLe~V~~L~~k 97 (151)
|.+++..|..+|-+++..++.|+.+.+.
T Consensus 85 L~~q~~~L~~~i~~l~~~l~~l~~~i~~ 112 (146)
T 3hh0_A 85 MHFQREVLLAEQERIAKVLSHMDEMTKK 112 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666666666666666665544
No 15
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=30.67 E-value=1.2e+02 Score=22.01 Aligned_cols=52 Identities=6% Similarity=0.142 Sum_probs=32.0
Q ss_pred cHHHHhcc-CC--cCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccccHHHHH
Q 031875 37 DVQTFLSQ-LD--LDVNSALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCL 88 (151)
Q Consensus 37 dV~~~~~~-~~--~~~e~~l~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikktL 88 (151)
+|+..+.. || .+.+..+++++++....+-.+..+.+..+.-..-+-.++..|
T Consensus 72 qIe~LIdsLP~~~~see~Q~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l 126 (132)
T 1ykh_B 72 QINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMI 126 (132)
T ss_dssp HHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444433 55 477777888888888877777777666655544444444443
No 16
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=30.59 E-value=1.3e+02 Score=24.98 Aligned_cols=58 Identities=21% Similarity=0.134 Sum_probs=36.1
Q ss_pred ccccHHHHhccCCcCHHHHHHHHHHHH----HhHHHH------HHHHHHHHHHHHhccccHHHHHHHHH
Q 031875 34 FVEDVQTFLSQLDLDVNSALAFLQERL----QQYKLV------EMKLLAQQRDLQAKIPDIEKCLDIVA 92 (151)
Q Consensus 34 FiedV~~~~~~~~~~~e~~l~~l~e~~----~KYk~m------E~~l~~~~~~L~~kIPdikktLe~V~ 92 (151)
+-+-+..++... .+++++++.++... .+++.. -.-|++++.+++.++|++++--.+|+
T Consensus 357 ~~~~~~~vl~G~-~t~eeal~~~~~~i~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (471)
T 3mq9_A 357 VRTAVINAASGR-QTVDEALKDAQTRITAARDGLRAVMEARNVTHLLQQELTEAQKGFQDVEAQAATAN 424 (471)
T ss_dssp HHHHHHHHHHSS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHhhhHHHHHHHhhhcc
Confidence 334455566443 58888887776664 444433 22377888888888888876554443
No 17
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=29.00 E-value=1.3e+02 Score=21.51 Aligned_cols=29 Identities=21% Similarity=0.202 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHh
Q 031875 68 MKLLAQQRDLQAKIPDIEKCLDIVATLQA 96 (151)
Q Consensus 68 ~~l~~~~~~L~~kIPdikktLe~V~~L~~ 96 (151)
.-|.+++..+..+|-++++.++.++....
T Consensus 84 ~~L~~~~~~l~~~i~~L~~~~~~L~~~i~ 112 (142)
T 3gp4_A 84 ELLKKQRIELKNRIDVMQEALDRLDFKID 112 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555566666666666555555443
No 18
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=28.08 E-value=1.3e+02 Score=22.37 Aligned_cols=48 Identities=6% Similarity=0.135 Sum_probs=27.1
Q ss_pred HHHHhcc-CC--cCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccccHH
Q 031875 38 VQTFLSQ-LD--LDVNSALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIE 85 (151)
Q Consensus 38 V~~~~~~-~~--~~~e~~l~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdik 85 (151)
|+..+.. || .+.+..+++++++....+..+..+.+..+.-..-+-.++
T Consensus 73 Ie~LIdsLPg~~~seeeQ~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~ 123 (151)
T 1yke_B 73 INKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVD 123 (151)
T ss_dssp HHHHHHHCTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433 55 366667777777777777666666555544433333333
No 19
>2xz3_A Maltose ABC transporter periplasmic protein, ENVE glycoprotein; viral protein, viral membrane fusion, hairpin, chimera; HET: MAL; 1.95A {Escherichia coli} PDB: 1mg1_A*
Probab=26.23 E-value=2e+02 Score=23.80 Aligned_cols=55 Identities=25% Similarity=0.097 Sum_probs=36.4
Q ss_pred cHHHHhccCCcCHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Q 031875 37 DVQTFLSQLDLDVNSALAFLQERLQ-----QYKLVEMKLLAQQRDLQAKIPDIEKCLDIVA 92 (151)
Q Consensus 37 dV~~~~~~~~~~~e~~l~~l~e~~~-----KYk~mE~~l~~~~~~L~~kIPdikktLe~V~ 92 (151)
-+..++.+. .+++++++.+++... ..+-+-..+...+..+...|-.+++.|.-|.
T Consensus 347 ~l~~~~~G~-~t~eeal~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 406 (463)
T 2xz3_A 347 AVINAASGR-QTVDAALAAAQTNAAALSHQRLTSLIHVLEQDQQRLITAINQTHYNLLNVA 406 (463)
T ss_dssp HHHHHHTTS-SCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC-CCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555443 589999999988763 4455556666666677777777776666544
No 20
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=25.69 E-value=1.2e+02 Score=18.75 Aligned_cols=41 Identities=12% Similarity=0.282 Sum_probs=34.8
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhh
Q 031875 57 QERLQQYKLVEMKLLAQQRDLQAKIPDIEKCLDIVATLQAK 97 (151)
Q Consensus 57 ~e~~~KYk~mE~~l~~~~~~L~~kIPdikktLe~V~~L~~k 97 (151)
+.+++|||.+-.+|.++..-|+..-.+.+.-++-++.|-..
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LLkq 43 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLKQ 43 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 35678999999999999999999988888888888777654
No 21
>3qf7_D MRE11; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima}
Probab=25.39 E-value=54 Score=20.22 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=28.1
Q ss_pred CCcccccccHHHHhccCCcCHHHHHHHHHHHHHhHHH
Q 031875 29 IPAAQFVEDVQTFLSQLDLDVNSALAFLQERLQQYKL 65 (151)
Q Consensus 29 IP~A~FiedV~~~~~~~~~~~e~~l~~l~e~~~KYk~ 65 (151)
|.+-.|.|=..+|++++..+-+..|+.|.+++..-|-
T Consensus 4 ~~kld~felfkey~k~r~~~he~l~k~~~ell~evkk 40 (50)
T 3qf7_D 4 LDKLDYFELFKEYLKKREENHEKLLKILDELLDEVKK 40 (50)
T ss_dssp ---CCHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHH
T ss_pred hhHhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 5566788888999988767899999999998876554
No 22
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=23.54 E-value=73 Score=17.75 Aligned_cols=20 Identities=25% Similarity=0.418 Sum_probs=9.8
Q ss_pred HHHHHHhccccHHHHHHHHH
Q 031875 73 QQRDLQAKIPDIEKCLDIVA 92 (151)
Q Consensus 73 ~~~~L~~kIPdikktLe~V~ 92 (151)
+-..|..|+..+++-|+.++
T Consensus 9 kcaalesklqalekkleale 28 (31)
T 3ljm_A 9 KCAALESKLQALEKKLEALE 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555543
No 23
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=23.42 E-value=1.6e+02 Score=19.71 Aligned_cols=42 Identities=19% Similarity=0.317 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccccHHHHHH
Q 031875 48 DVNSALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEKCLD 89 (151)
Q Consensus 48 ~~e~~l~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikktLe 89 (151)
+.+.++..+........---..|..+...+..++-+++..|.
T Consensus 67 ~~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~ 108 (117)
T 2zqm_A 67 TKDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQ 108 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477777777777766666666666677777777776666654
No 24
>3shg_B VBHA; ampylation, adenylylation, toxin-antitoxin complex, FIC fold transfer, transferase-protein binding complex; HET: TLA; 1.50A {Bartonella schoenbuchensis R1}
Probab=23.19 E-value=59 Score=21.23 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=27.2
Q ss_pred CCCCcccccccHHHHhccCCcCHHHHHHHHHHHH
Q 031875 27 RGIPAAQFVEDVQTFLSQLDLDVNSALAFLQERL 60 (151)
Q Consensus 27 rgIP~A~FiedV~~~~~~~~~~~e~~l~~l~e~~ 60 (151)
..=|.+.|+++.+.|+.+. .+.+++++.+.++.
T Consensus 25 GLEpd~~~l~~~erwv~GE-is~~e~i~~~~~r~ 57 (61)
T 3shg_B 25 GLEPDPQVVAQMERVVVGE-LETSDVIKDLMERI 57 (61)
T ss_dssp TCCCCHHHHHHHHHHHHTS-SCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHcc-CCHHHHHHHHHHHH
Confidence 3569999999999999765 78888888877654
No 25
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=22.24 E-value=1.2e+02 Score=21.87 Aligned_cols=34 Identities=24% Similarity=0.119 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhh
Q 031875 64 KLVEMKLLAQQRDLQAKIPDIEKCLDIVATLQAK 97 (151)
Q Consensus 64 k~mE~~l~~~~~~L~~kIPdikktLe~V~~L~~k 97 (151)
.....-+.+++..|..+|-++++.++.++...+.
T Consensus 94 ~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~ 127 (148)
T 3gpv_A 94 LHRLKLMKQQEANVLQLIQDTEKNLKKIQQKIAK 127 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444567778888888888888888888777655
No 26
>1p68_A De novo designed protein S-824; four helix bundle, de novo protein; NMR {Escherichia coli} SCOP: k.8.1.1 PDB: 2jua_A
Probab=21.41 E-value=39 Score=23.47 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=14.9
Q ss_pred ccccHHHHhccCC--cCHHHHHHHHHH
Q 031875 34 FVEDVQTFLSQLD--LDVNSALAFLQE 58 (151)
Q Consensus 34 FiedV~~~~~~~~--~~~e~~l~~l~e 58 (151)
.||||-+||...+ +..++.++.||.
T Consensus 40 viedihdfmqgggsggklqemmkefqq 66 (102)
T 1p68_A 40 VIEDIHDFMQGGGSGGKLQEMMKEFQQ 66 (102)
T ss_dssp HHHHHHTTTTTSSTTTHHHHTHHHHHH
T ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 5889999997654 233444444433
No 27
>2ovc_A Potassium voltage-gated channel subfamily KQT MEM; potassium channel, ION channel assemb coiled-coil, tetramer, transport protein; 2.07A {Homo sapiens}
Probab=21.35 E-value=82 Score=18.06 Aligned_cols=25 Identities=16% Similarity=0.437 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhccccHHHHHHHHH
Q 031875 68 MKLLAQQRDLQAKIPDIEKCLDIVA 92 (151)
Q Consensus 68 ~~l~~~~~~L~~kIPdikktLe~V~ 92 (151)
.++-.|..++..|+-+|++-|+.+-
T Consensus 6 ~Sm~~Rl~kVE~qv~~md~KLd~l~ 30 (33)
T 2ovc_A 6 ISMMGRVVKVEKQVQSIEHKLDLLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888889999999999988764
No 28
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=21.15 E-value=1.4e+02 Score=24.47 Aligned_cols=68 Identities=13% Similarity=0.197 Sum_probs=47.2
Q ss_pred CCCCCcccccccHHHHhccCCcCHHHHH---HHHHHHH------HhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHh
Q 031875 26 RRGIPAAQFVEDVQTFLSQLDLDVNSAL---AFLQERL------QQYKLVEMKLLAQQRDLQAKIPDIEKCLDIVATLQA 96 (151)
Q Consensus 26 ~rgIP~A~FiedV~~~~~~~~~~~e~~l---~~l~e~~------~KYk~mE~~l~~~~~~L~~kIPdikktLe~V~~L~~ 96 (151)
.+|||.+-|.--|--||... .++..++ +.+...+ .........+.++...+..+-+++.+ +|+.|++
T Consensus 189 ~~Gi~a~~l~~~vphYl~~~-pdP~AA~~lL~~l~~l~gl~id~~~L~e~A~~~e~~i~~l~~~~~e~~~---~V~~LE~ 264 (319)
T 2p90_A 189 DKGKNVSGYTVHVPHYVSAS-PYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLMEQTEESSEIQR---VVGALEQ 264 (319)
T ss_dssp HTTCCEEEEEEEEEGGGTTS-CCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH---HHHHHHH
T ss_pred HCCCCEEEEEEecCcccCCC-CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHH---HHHHHHh
Confidence 38999999999999999764 3555544 4444443 55666777778888888877777774 4455555
Q ss_pred h
Q 031875 97 K 97 (151)
Q Consensus 97 k 97 (151)
+
T Consensus 265 ~ 265 (319)
T 2p90_A 265 Q 265 (319)
T ss_dssp H
T ss_pred h
Confidence 4
No 29
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=20.79 E-value=43 Score=22.77 Aligned_cols=14 Identities=21% Similarity=0.458 Sum_probs=10.9
Q ss_pred CCCeEEEeccccee
Q 031875 122 DTDSVCLWLGANVM 135 (151)
Q Consensus 122 ~~d~V~LWLGAnVM 135 (151)
...+||+|.|.+.-
T Consensus 36 ~g~~iyvW~G~~s~ 49 (104)
T 1kcq_A 36 LGNNIHQWCGSNSN 49 (104)
T ss_dssp CSSEEEEEECTTCC
T ss_pred CCCEEEEEeCCCCC
Confidence 34689999997764
No 30
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=20.61 E-value=1.8e+02 Score=18.87 Aligned_cols=44 Identities=30% Similarity=0.427 Sum_probs=27.4
Q ss_pred HHHHhccCCcCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccccHHH
Q 031875 38 VQTFLSQLDLDVNSALAFLQERLQQYKLVEMKLLAQQRDLQAKIPDIEK 86 (151)
Q Consensus 38 V~~~~~~~~~~~e~~l~~l~e~~~KYk~mE~~l~~~~~~L~~kIPdikk 86 (151)
|++|| ++-.++..-....|+.=..-.++.+.++.++.+|-.++.
T Consensus 12 ~qeyl-----evK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQs 55 (63)
T 2w6a_A 12 LQEYL-----ELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQA 55 (63)
T ss_dssp HHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-----HHHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHh
Confidence 45666 244455555555666666667777777777777766553
Done!