Query 031876
Match_columns 151
No_of_seqs 125 out of 1045
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:15:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f7s_A Actin depolymerizing fa 100.0 2.3E-45 8E-50 265.0 15.4 139 13-151 1-139 (139)
2 2i2q_A Cofilin; N-terminal ser 100.0 2.4E-44 8.2E-49 258.9 14.6 135 15-151 1-135 (137)
3 1cfy_A Cofilin; actin-binding, 100.0 5.5E-44 1.9E-48 258.7 15.0 135 15-150 1-136 (143)
4 2kvk_A Actin severing and dyna 100.0 1.6E-43 5.3E-48 257.1 15.3 133 15-150 1-133 (144)
5 2lj8_A Cofilin/actin depolymer 100.0 4.4E-43 1.5E-47 254.7 15.7 137 10-150 4-140 (144)
6 1cnu_A Actophorin, ADF, cofili 100.0 1.6E-42 5.6E-47 249.2 16.3 133 18-151 1-133 (137)
7 2kd5_A ADF H, actin severing a 100.0 1E-42 3.5E-47 252.7 14.5 133 15-150 1-133 (144)
8 2xfa_A Actin depolymerization 100.0 3.1E-43 1.1E-47 256.3 11.5 134 16-151 6-145 (148)
9 1vkk_A GMF-gamma, GLIA maturat 100.0 1.6E-42 5.5E-47 254.4 14.2 136 13-150 13-150 (154)
10 1tvj_A Cofilin; ADF, actin bin 100.0 5.7E-42 1.9E-46 254.2 15.6 135 16-151 1-154 (166)
11 1v6f_A MGMF-beta, GLIA maturat 100.0 5.9E-41 2E-45 245.2 15.4 137 12-150 6-144 (151)
12 2d8b_A Twinfilin-1; cell-free 100.0 9.1E-41 3.1E-45 247.7 14.5 139 8-150 13-159 (166)
13 1m4j_A A6 gene product, twinfi 100.0 5.5E-41 1.9E-45 242.9 10.7 130 16-151 3-139 (142)
14 1ak6_A Destrin; actin depolyme 100.0 1.5E-41 5.1E-46 253.7 6.8 135 16-151 10-162 (174)
15 2w0i_A Twinfilin-2; cytoskelet 100.0 1.2E-39 4.1E-44 234.2 14.4 127 20-150 2-134 (135)
16 2vac_A Twinfilin-2; transferas 100.0 3.5E-40 1.2E-44 236.6 10.8 127 17-149 1-134 (134)
17 1hqz_1 ABP1P, actin-binding pr 100.0 1.2E-38 4E-43 230.3 14.3 129 15-150 1-135 (141)
18 3daw_B Twinfilin-1, protein A6 100.0 1E-37 3.5E-42 230.9 15.8 132 16-151 16-155 (164)
19 3q2b_A Pfadf1, cofilin/actin-d 100.0 1.5E-39 5.2E-44 230.8 5.6 117 15-143 2-122 (124)
20 2l72_A Tgadf, actin depolymeri 100.0 1E-37 3.4E-42 225.3 10.6 116 16-144 22-138 (139)
21 1x67_A Drebrin-like protein; c 100.0 7.2E-37 2.5E-41 222.4 14.6 122 24-150 17-139 (146)
22 1t3y_A Coactosin-like protein; 100.0 1.3E-33 4.5E-38 204.1 12.5 122 23-150 6-128 (141)
23 3cip_G Gelsolin; actin, dictyo 63.3 32 0.0011 23.3 7.3 86 28-129 9-94 (128)
24 2ff3_A Gelsolin; protein-prote 61.8 35 0.0012 23.9 7.0 86 28-129 28-113 (150)
25 2vik_A Villin 14T; actin-bindi 61.0 33 0.0011 23.2 6.6 76 39-129 16-91 (126)
26 1t44_G Chimera of gelsolin dom 60.0 40 0.0014 23.4 7.0 86 28-129 6-91 (147)
27 2k5j_A Uncharacterized protein 43.9 10 0.00035 23.6 1.5 26 11-36 5-30 (80)
28 3tu5_B Gelsolin, protein cordo 34.2 1.2E+02 0.0042 23.4 6.8 86 28-129 24-109 (297)
29 2p2e_A Putative Fe-S biosynthe 33.3 48 0.0017 22.3 3.8 27 20-47 5-31 (128)
30 2ay0_A Bifunctional PUTA prote 31.1 20 0.00067 20.8 1.3 25 13-37 1-25 (58)
31 2khi_A 30S ribosomal protein S 30.9 18 0.00063 23.7 1.3 66 4-69 46-112 (115)
32 2raq_A Conserved protein MTH88 28.2 1.2E+02 0.0043 19.6 5.0 59 24-83 22-80 (97)
33 1ncq_A Coat protein VP1; HRV, 27.6 86 0.0029 24.3 4.8 15 97-111 147-161 (289)
34 3vbh_A EV71, genome polyprotei 26.8 91 0.0031 24.3 4.8 45 65-111 116-164 (297)
35 1z7s_1 Human coxsackievirus A2 22.9 1.2E+02 0.004 23.6 4.8 15 97-111 149-163 (298)
36 1tme_1 Theiler'S murine enceph 22.9 88 0.003 24.1 4.0 33 78-110 121-153 (274)
37 1fmd_1 Foot-and-mouth disease 22.4 69 0.0024 23.7 3.2 29 77-111 69-97 (208)
38 2mev_1 Mengo virus coat protei 21.1 86 0.0029 24.2 3.6 33 78-110 121-153 (277)
39 2gpe_A Bifunctional protein PU 21.0 30 0.001 19.1 0.7 24 13-36 1-24 (52)
No 1
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=100.00 E-value=2.3e-45 Score=265.01 Aligned_cols=139 Identities=63% Similarity=1.145 Sum_probs=119.3
Q ss_pred ccccccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCC
Q 031876 13 QTNASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENC 92 (151)
Q Consensus 13 ~~m~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~ 92 (151)
|+|++|||.+++||+++|++++.++.+||++|+|+.++++|+++++|+...+|+||.+.||+++|||++||+++++++|+
T Consensus 1 ~~~~~sGi~v~~e~~~af~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~ 80 (139)
T 1f7s_A 1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENC 80 (139)
T ss_dssp ----CCCCEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSC
T ss_pred CCcCccCcEeCHHHHHHHHHHHcCCCcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccC
Confidence 56899999999999999999999767999999999988899999988766689999999999999999999999999999
Q ss_pred ccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 031876 93 QKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 151 (151)
Q Consensus 93 ~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~~ 151 (151)
+++|++||+|||++||+|.||+|||+|++|++.|+|++++|||+|++||+++.+.+|++
T Consensus 81 ~~~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v~i~a~d~~el~~~~i~~~~~ 139 (139)
T 1f7s_A 81 QKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139 (139)
T ss_dssp EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCEEEEECCTTC-----------
T ss_pred cccCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEEEEEECChHHCCHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999874
No 2
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-44 Score=258.94 Aligned_cols=135 Identities=44% Similarity=0.790 Sum_probs=116.1
Q ss_pred ccccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCcc
Q 031876 15 NASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQK 94 (151)
Q Consensus 15 m~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~ 94 (151)
||+|||.+++||+++|++++.++.++||+|+|+.++++|++++ ++.+.+|++|.+.||+++|||++||+++++.+| .+
T Consensus 1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~-~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~ 78 (137)
T 2i2q_A 1 MSFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEG-VR 78 (137)
T ss_dssp -CCSCCEECHHHHHHHHHHHHTCCCSEEEEEECTTSSEEEEEE-EECCCCHHHHHHTSCSSSCEEEEEEEEECSSSS-CE
T ss_pred CCCCCcccCHHHHHHHHHHHCCCCceEEEEEECCCCcEEEEec-CCCCCCHHHHHHhCCCcCceEEEEEeeeecCCC-Cc
Confidence 7899999999999999999998779999999998888999988 545689999999999999999999999998887 88
Q ss_pred ccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 031876 95 SKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 151 (151)
Q Consensus 95 ~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~~ 151 (151)
+|++||+|||++||+|+||+|||+|++|++.|+|+++++||+|++||+++.+.+++.
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl~ 135 (137)
T 2i2q_A 79 NKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYETVLEKVT 135 (137)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCCCEEEEECCCC------------
T ss_pred cCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCceEEEEECChHHcCHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999873
No 3
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=100.00 E-value=5.5e-44 Score=258.75 Aligned_cols=135 Identities=41% Similarity=0.777 Sum_probs=124.7
Q ss_pred ccccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCC-Cc
Q 031876 15 NASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSEN-CQ 93 (151)
Q Consensus 15 m~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g-~~ 93 (151)
||+|||.+++||+++|+++|.++.+|||+|+|+.++++|+++++++ ..+|++|.+.||+++|||++||+++++.+| ++
T Consensus 1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~-~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~ 79 (143)
T 1cfy_A 1 MSRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETST-DPSYDAFLEKLPENDCLYAIYDFEYEINGNEGK 79 (143)
T ss_dssp -----CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEEC-CCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCE
T ss_pred CCcCCcEeCHHHHHHHHHHHCCCCeeEEEEEEcCCCCEEEEEecCC-CCCHHHHHHhCCCCCcEEEEEEeeeecCCCccc
Confidence 7899999999999999999999879999999998888999998875 678999999999999999999999998888 89
Q ss_pred cccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 94 KSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 94 ~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
++|++||+|||++||+|+||+|||+|++|++.|+|++++|||+|++||+++.+.+++
T Consensus 80 ~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl 136 (143)
T 1cfy_A 80 RSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYDSVLERV 136 (143)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCEEEEESSGGGGSHHHHHHHH
T ss_pred ccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceEEEEeCChHHCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999986
No 4
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=100.00 E-value=1.6e-43 Score=257.08 Aligned_cols=133 Identities=29% Similarity=0.537 Sum_probs=125.1
Q ss_pred ccccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCcc
Q 031876 15 NASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQK 94 (151)
Q Consensus 15 m~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~ 94 (151)
|++|||.++|+|+++|++||.++ +||++|+|+.++++|+++++++.+.+|+||.+.||+++|||++||++|.++ ++++
T Consensus 1 Ma~SGv~v~de~~~af~~lk~~k-~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~-~~~~ 78 (144)
T 2kvk_A 1 MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDA-GSKR 78 (144)
T ss_dssp CCCCCCEECHHHHHHHHHHHTTS-SSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEET-TEEE
T ss_pred CCcCCcccCHHHHHHHHHHhcCC-ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccC-CCCc
Confidence 89999999999999999999986 899999999999999999888777899999999999999999999999765 4578
Q ss_pred ccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 95 SKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 95 ~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
+|++||+|||++||+|+||+|||+|++|++.|+| +++|||+|++||+++.+.+++
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~-~~~i~a~d~~el~~e~i~~kl 133 (144)
T 2kvk_A 79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEG-YLPIQANDESGLDAEEIIRKV 133 (144)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT-EEEEEESSGGGGCHHHHHHHH
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC-EEEEEECChHHCCHHHHHHHH
Confidence 8999999999999999999999999999999987 579999999999999999986
No 5
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=100.00 E-value=4.4e-43 Score=254.72 Aligned_cols=137 Identities=34% Similarity=0.603 Sum_probs=121.7
Q ss_pred cccccccccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecC
Q 031876 10 FGCQTNASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTS 89 (151)
Q Consensus 10 ~~~~~m~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~ 89 (151)
+++.+|++|||.++|||+++|++||.++ +||++|+|+++ ++++++..+..+.+|++|.+.||+++|||++|+|++.++
T Consensus 4 ~~~~~Ma~SGi~vsde~~~af~~lk~~k-~~~ii~~i~d~-~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~ 81 (144)
T 2lj8_A 4 HHHHHMAMSGVSVADECVTALNDLRHKK-SRYVIMHIVDQ-KSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTN 81 (144)
T ss_dssp -----CCCSSCEECHHHHHHHHHHTTTS-SSEEEEEEETT-TEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSS
T ss_pred cccCccccCCceeCHHHHHHHHHHhcCC-ceEEEEEEECC-cEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccC
Confidence 3567899999999999999999999886 89999999976 466666667777899999999999999999999999877
Q ss_pred CCCccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 90 ENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 90 ~g~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
++ .++|++||+|||++||+|+||+|||+|++|++.|+|++ +|||+|++||++++|.++|
T Consensus 82 ~~-~~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~~-~i~a~d~~el~~e~i~~kl 140 (144)
T 2lj8_A 82 DG-PRDKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQ-GIQANDASGLDFEEISRKV 140 (144)
T ss_dssp SS-SEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTSE-EEECCGGGTSCHHHHHHHH
T ss_pred CC-CcccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCee-EEEeCChHHCCHHHHHHHH
Confidence 65 57899999999999999999999999999999999886 7999999999999999987
No 6
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=100.00 E-value=1.6e-42 Score=249.23 Aligned_cols=133 Identities=43% Similarity=0.869 Sum_probs=125.9
Q ss_pred cCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccE
Q 031876 18 SGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKI 97 (151)
Q Consensus 18 SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~ 97 (151)
|||.++++|+++|++++.++.++|++|+|+.++++|++++++++..+|++|.+.||+++|||++||+++++.+| .++|+
T Consensus 1 SGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~~k~ 79 (137)
T 1cnu_A 1 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGG-QRNKI 79 (137)
T ss_dssp -CCEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTE-EEEEE
T ss_pred CCCccCHHHHHHHHHHHcCCCccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCC-CccCE
Confidence 79999999999999999987799999999998899999998866789999999999999999999999998887 88999
Q ss_pred EEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 031876 98 FFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 151 (151)
Q Consensus 98 vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~~ 151 (151)
+||+|||++||+|+||+|||+|++|++.|+|+++++||+|++||+++.+.+++.
T Consensus 80 vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~~i~a~~~~el~~~~i~~kl~ 133 (137)
T 1cnu_A 80 TFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAK 133 (137)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSTTTTSHHHHHHHHT
T ss_pred EEEEECCCCCChHHheehHHhHHHHHHHhcCceEEEEECChHHCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999874
No 7
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=100.00 E-value=1e-42 Score=252.68 Aligned_cols=133 Identities=29% Similarity=0.537 Sum_probs=125.9
Q ss_pred ccccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCcc
Q 031876 15 NASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQK 94 (151)
Q Consensus 15 m~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~ 94 (151)
|++|||.+++||+++|++++.++ +||++|+|+.++++|+++++|..+.+|++|.+.||+++|||++||+++++++ +++
T Consensus 1 Ms~SGi~vs~e~~~a~~~~~~~~-~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~-~~~ 78 (144)
T 2kd5_A 1 MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAG-SKR 78 (144)
T ss_dssp CCCCSCBCCHHHHHHHHHHTTTS-SSEEEEEECSSSCBEEEEEECCSCCCHHHHTTTTSCSSCEEEEEEEEEESSS-CEE
T ss_pred CCccCCCcCHHHHHHHHHHHcCC-eeEEEEEECCCCCEEEEEeccCCCCCHHHHHHhCCccCcEEEEEEEEecCCC-CCc
Confidence 55599999999999999999998 9999999998888999999877678999999999999999999999998876 568
Q ss_pred ccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 95 SKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 95 ~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
+|++||+|||++||+|.||+|||+|++|++.|+|+ ++|||+|++||+++.|.+++
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~-~~i~a~d~~el~~~~i~~kl 133 (144)
T 2kd5_A 79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEGY-LPIQANDESGLDAEEIIRKV 133 (144)
T ss_dssp EEEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS-EEEEESSSSSSSHHHHHHHH
T ss_pred cCEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe-EEEEECChHHCCHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999987
No 8
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.1e-43 Score=256.28 Aligned_cols=134 Identities=29% Similarity=0.529 Sum_probs=124.4
Q ss_pred cccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEe------eCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecC
Q 031876 16 ASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVE------KTGGPAESYDDFTASLPDNDCRYAVYDFDFVTS 89 (151)
Q Consensus 16 ~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~------~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~ 89 (151)
|+|||.+++||+++|++++.++.+|||+|+| .++++|+++ ++++...+|++|.+.||+++|||++||++++++
T Consensus 6 m~sGi~v~~e~~~af~~~k~~k~~~~ii~~i-~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~~~~ 84 (148)
T 2xfa_A 6 MVSGVNVSDECIYEFNRLKVKHLNKYIIYKI-ENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPIPTP 84 (148)
T ss_dssp CCCCCEECHHHHHHHHHHHTSCCCSEEEEEE-ETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEECCS
T ss_pred ccCCCeeCHHHHHHHHHHHCCCceEEEEEEE-CCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEecccccC
Confidence 4699999999999999999998899999999 556889998 555434679999999999999999999999999
Q ss_pred CCCccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 031876 90 ENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 151 (151)
Q Consensus 90 ~g~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~~ 151 (151)
+|++++|++||+|||++||+|+||+|||+|++|++.|+|++++|||+| +||+++.+.++++
T Consensus 85 ~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~i~atd-~el~~~~i~~k~~ 145 (148)
T 2xfa_A 85 EGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFKSLEITC-DINEFEEELKAII 145 (148)
T ss_dssp SCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSEEEEECS-CGGGHHHHHHHHH
T ss_pred CCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeEEEEEEc-ccCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999 9999999999873
No 9
>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A
Probab=100.00 E-value=1.6e-42 Score=254.37 Aligned_cols=136 Identities=20% Similarity=0.329 Sum_probs=124.4
Q ss_pred ccccccCCccCHHHHHHHHHHhhcC--ceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCC
Q 031876 13 QTNASSGMGVADHSKSTYLELQRKK--VHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSE 90 (151)
Q Consensus 13 ~~m~~SGi~i~~e~~~a~~~lk~~~--~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~ 90 (151)
|+.+.+|+.++|+|+++|++||.++ .++||+|+|+.++++|+|+++++ +.+|+||.+.||+++|||++|||++++++
T Consensus 13 ~~~~~~~~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~-~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~ 91 (154)
T 1vkk_A 13 MSDSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQ-NISPEELKLELPERQPRFVVYSYKYVHDD 91 (154)
T ss_dssp -----CCCEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEE-SCCHHHHHHHSCSSSCEEEEEECCEECTT
T ss_pred ccccccceeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCC-CCCHHHHHHhCCCCCcEEEEEEeeeccCC
Confidence 5667889999999999999999875 58999999999889999998654 57899999999999999999999999999
Q ss_pred CCccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 91 NCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 91 g~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
|++++|++||+|||++|++|.||+|||+|++|++.| |++++|||+|++||+++.|.++|
T Consensus 92 g~~~~klvFI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~e~i~~kl 150 (154)
T 1vkk_A 92 GRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELTKVFEIRTTDDLTETWLKEKL 150 (154)
T ss_dssp SCEECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCCCEEEESSGGGCCHHHHHHHH
T ss_pred CcccccEEEEEECCCCCChhhhhhhHhhHHHHHHhh-CceEEEEECChHhCCHHHHHHHH
Confidence 989999999999999999999999999999999999 89999999999999999999987
No 10
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=100.00 E-value=5.7e-42 Score=254.21 Aligned_cols=135 Identities=32% Similarity=0.660 Sum_probs=124.9
Q ss_pred cccCCccCHHHHHHHHHHhhcC---------ceeEEEEEEeCCCcEEEEee--------CCCC-CCCHHHHhhcCCCCCe
Q 031876 16 ASSGMGVADHSKSTYLELQRKK---------VHRYVIFKIDEKKKEVVVEK--------TGGP-AESYDDFTASLPDNDC 77 (151)
Q Consensus 16 ~~SGi~i~~e~~~a~~~lk~~~---------~~~~iif~i~~~~~~i~l~~--------~~~~-~~~~~el~~~L~~~~p 77 (151)
|+|||.++|||+++|+++|.++ .+||++|+|++++++|++++ .+++ ..+|++|++.||+++|
T Consensus 1 m~SGi~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~p 80 (166)
T 1tvj_A 1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDC 80 (166)
T ss_dssp CCCCCEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSC
T ss_pred CCCCCeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCc
Confidence 5799999999999999999986 48999999999888999987 3433 5789999999999999
Q ss_pred eeEEEEEEeecCCCCccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCC-CHHHHHhhhC
Q 031876 78 RYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEM-DLEVIRDRAR 151 (151)
Q Consensus 78 ry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el-~~~~i~~~~~ 151 (151)
||++||++|++.++ .++||+||+|||++||+|.||+|||+|++|++.|+|+++++||+|++|| +++++.++|.
T Consensus 81 rY~vy~~~~~~~~~-~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~~i~atd~~el~~~~~i~ekl~ 154 (166)
T 1tvj_A 81 RYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLG 154 (166)
T ss_dssp EEEEEEEEEEESSC-EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCCEEEESSGGGTCCHHHHHHHHT
T ss_pred EEEEEeccccCCCC-CccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeEEEEECChHHcCCHHHHHHHhC
Confidence 99999999988875 8899999999999999999999999999999999999999999999999 9999999874
No 11
>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=5.9e-41 Score=245.24 Aligned_cols=137 Identities=20% Similarity=0.333 Sum_probs=125.3
Q ss_pred cccccccCCccCHHHHHHHHHHhhcC--ceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecC
Q 031876 12 CQTNASSGMGVADHSKSTYLELQRKK--VHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTS 89 (151)
Q Consensus 12 ~~~m~~SGi~i~~e~~~a~~~lk~~~--~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~ 89 (151)
+.++....+.++++|+++|++||.++ .++|++|+|+.++++|+++++++ +.+|+||.+.||+++|||++||++|+++
T Consensus 6 ~~~~~~~~~~v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~-~~~~~el~~~Lp~~~prY~~~~~~~~~~ 84 (151)
T 1v6f_A 6 SGSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELE-GVSPDELKDELPERQPRFIVYSYKYQHD 84 (151)
T ss_dssp CCCCCCCCCEECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEE-SCCHHHHGGGSCSSSCEEEEEECCEECT
T ss_pred CCCCCceEEEECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCC-CCCHHHHHhhCCCCCceEEEEecccccC
Confidence 33334445779999999999999986 48999999999888999998654 5689999999999999999999999999
Q ss_pred CCCccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 90 ENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 90 ~g~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
+|+.++|++||+|||++|++|+||+|||+|++|++.| |++++|||+|++||+++.|.+++
T Consensus 85 ~~~~~~k~vfI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~~~i~~kl 144 (151)
T 1v6f_A 85 DGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTA-ELTKVFEIRNTEDLTEEWLREKL 144 (151)
T ss_dssp TSCEECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCSEEEEESSGGGCCHHHHHHHH
T ss_pred CCcccccEEEEEECCCCCChHHheehHHHHHHHHHHh-CCeEEEEECChHHCCHHHHHHHH
Confidence 9888999999999999999999999999999999999 89999999999999999999987
No 12
>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}
Probab=100.00 E-value=9.1e-41 Score=247.75 Aligned_cols=139 Identities=18% Similarity=0.375 Sum_probs=130.4
Q ss_pred eCcccccccccCCc--cCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEE
Q 031876 8 FGFGCQTNASSGMG--VADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFD 85 (151)
Q Consensus 8 ~~~~~~~m~~SGi~--i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~ 85 (151)
+|+++....+|||. ++++|+++|++||.+ .++||+|+|+.++++|+|++++ +.+|+||.+.||+++|||++|||+
T Consensus 13 ~~~~~~~~~~sgv~~~v~~e~~~a~~~lk~~-~~~~vifkId~~~~~I~v~~~~--~~~~~el~~~Lp~~~pRY~~y~~~ 89 (166)
T 2d8b_A 13 VSVDTKHQTLQGVAFPISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANTE--NTELRDLPKRIPKDSARYHFFLYK 89 (166)
T ss_dssp CSCCCCCSCSCCCCCCBCHHHHHHHHHHHTT-CCSCCEEEEETTTTEEEEEECC--CCCSTTHHHHSCSSCCEEEEEEEE
T ss_pred cccccCccccCCcccCcCHHHHHHHHHHHcC-CCcEEEEEEeCCCCEEEEEecC--CCCHHHHHHhCCCCCceEEEEecc
Confidence 67888887789999 999999999999998 5999999999988999999876 578999999999999999999999
Q ss_pred eecCCCCccccEEEEEEcCC-CCCcchhhhhhhhHHHHHHhcC---Ce--eEEEEeCCcCCCCHHHHHhhh
Q 031876 86 FVTSENCQKSKIFFIAWSPD-VSRIRAKMLYATSKDRFRRELD---GI--HYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 86 ~~~~~g~~~~k~vfI~w~Pd-~a~vk~KMlYassk~~l~~~l~---gi--~~~i~a~d~~el~~~~i~~~~ 150 (151)
+++.++ +++|++||+|||+ +|++|+||+|||+|+.|++.|. |+ +++|||+|++||+++.|.+++
T Consensus 90 ~~~~~~-~~~k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~~~~Gi~v~~~iea~d~~El~~~~i~~kl 159 (166)
T 2d8b_A 90 HSHEGD-YLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEV 159 (166)
T ss_dssp EEETTE-EEEEEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHTTSSCCCCSEEEEESSSTTCCHHHHHHHH
T ss_pred ccCCCC-ccccEEEEEECCCCCCCHHHeeehhhhHHHHHHHHhhccCCceeEEEEeCChHHCCHHHHHHHh
Confidence 998876 6999999999999 9999999999999999999999 87 899999999999999999987
No 13
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=5.5e-41 Score=242.94 Aligned_cols=130 Identities=27% Similarity=0.512 Sum_probs=115.1
Q ss_pred cccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCC----CHHHHhhcC-CCCCeeeEEEEEEeecCC
Q 031876 16 ASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAE----SYDDFTASL-PDNDCRYAVYDFDFVTSE 90 (151)
Q Consensus 16 ~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~----~~~el~~~L-~~~~pry~~~~~~~~~~~ 90 (151)
|+|||.+++||+++|+++|.++ +||++|+|+++ +|+++++++... +|++|++.| |+++|||++||+++.+.+
T Consensus 3 m~SGi~v~~e~~~~f~~~k~~k-~~~ii~~i~~~--~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~~ 79 (142)
T 1m4j_A 3 HQTGIQASEDVKEIFARARNGK-YRLLKISIENE--QLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNAQ 79 (142)
T ss_dssp ----CCBCHHHHHHHHHHHTTT-CSEEEEEECSS--SEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT
T ss_pred CcCCCeECHHHHHHHHHHhcCC-eEEEEEEEcCC--EEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCCC
Confidence 4799999999999999999998 99999999774 788888776543 478899888 799999999999998765
Q ss_pred CCccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeE--EEEeCCcCCCCHHHHHhhhC
Q 031876 91 NCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHY--EIQATDPSEMDLEVIRDRAR 151 (151)
Q Consensus 91 g~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~--~i~a~d~~el~~~~i~~~~~ 151 (151)
++||+||+|||++||+|.||+|||+|++|++.|+|++. ++||+|++||+++.+.++++
T Consensus 80 ---~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~i~~~l~ 139 (142)
T 1m4j_A 80 ---GYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHGYKKYLL 139 (142)
T ss_dssp ---EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHHHHC
T ss_pred ---CceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCceeEEEEEeCChHHCCHHHHHHHHh
Confidence 48999999999999999999999999999999999887 99999999999999999874
No 14
>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M
Probab=100.00 E-value=1.5e-41 Score=253.67 Aligned_cols=135 Identities=33% Similarity=0.706 Sum_probs=123.2
Q ss_pred cccCCccCHHHHHHHHHHhhcC---------ceeEEEEEEeCCCcEEEEeeC--------CCC-CCCHHHHhhcCCCCCe
Q 031876 16 ASSGMGVADHSKSTYLELQRKK---------VHRYVIFKIDEKKKEVVVEKT--------GGP-AESYDDFTASLPDNDC 77 (151)
Q Consensus 16 ~~SGi~i~~e~~~a~~~lk~~~---------~~~~iif~i~~~~~~i~l~~~--------~~~-~~~~~el~~~L~~~~p 77 (151)
|+|||.++|||+++|+++|.++ .+|||+|+|++++++|++++. +++ ..+|++|.+.||+++|
T Consensus 10 m~SGi~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~~L~~~~p 89 (174)
T 1ak6_A 10 SASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPEKDC 89 (174)
T ss_dssp TTTCCCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHHTSCSSCC
T ss_pred ccCCCccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHHhCCCCCc
Confidence 4689999999999999999984 488999999988778888763 222 5689999999999999
Q ss_pred eeEEEEEEeecCCCCccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhhC
Q 031876 78 RYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRAR 151 (151)
Q Consensus 78 ry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~~ 151 (151)
||++||++|.+.+| +++||+||+|||++||+|.||+|||+|++|++.|+|++++|||+|++||+++++.++|.
T Consensus 90 rY~ly~~~~~~~~~-~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~gi~~~i~atd~~El~~e~i~~kl~ 162 (174)
T 1ak6_A 90 RYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRACIAEKLG 162 (174)
T ss_dssp CCEECCCCCCCSSC-SCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTTCSCCEEESSTTTTCHHHHHHHTT
T ss_pred EEEEEeCcccCCCC-ccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcCCeEEEEECChhhcCHHHHHHHhc
Confidence 99999999987775 88999999999999999999999999999999999999999999999999999999874
No 15
>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=234.17 Aligned_cols=127 Identities=19% Similarity=0.403 Sum_probs=120.0
Q ss_pred CccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccEEE
Q 031876 20 MGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFF 99 (151)
Q Consensus 20 i~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~vf 99 (151)
++|+|+|+++|++||.++ ++|++|+|+.++++|++++++ +.+++||.+.||+++|||++|||+++++++ .++|++|
T Consensus 2 ~~v~~e~~~a~~~lk~~~-~~~ii~~id~~~~~I~v~~~~--~~~~~el~~~Lp~~~~rY~~y~~~~~~~~~-~~~k~vf 77 (135)
T 2w0i_A 2 MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVHTE--PTDVAQLPSRVPRDAARYHFFLYKHTHEGD-PLESVVF 77 (135)
T ss_dssp CCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEECC--CCCGGGGGGGSCSSSCEEEEEEEEEEETTE-EEEEEEE
T ss_pred cccCHHHHHHHHHHHcCC-CcEEEEEEeCCCCEEEEEecC--CCCHHHHHhhCCCCCcEEEEEecccccCCC-CCccEEE
Confidence 679999999999999987 999999999988999999875 678999999999999999999999988765 8999999
Q ss_pred EEEcCC-CCCcchhhhhhhhHHHHHHhcC---Cee--EEEEeCCcCCCCHHHHHhhh
Q 031876 100 IAWSPD-VSRIRAKMLYATSKDRFRRELD---GIH--YEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 100 I~w~Pd-~a~vk~KMlYassk~~l~~~l~---gi~--~~i~a~d~~el~~~~i~~~~ 150 (151)
|+|||+ +|++|+||+|||+|+.|++.|+ |++ +++||+|++||+++.|.+++
T Consensus 78 I~w~P~~~~~vk~kMlYassk~~l~~~l~~~~Gi~v~~~iea~d~~el~~~~i~~kl 134 (135)
T 2w0i_A 78 IYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIGDGAELTAEFLDDEV 134 (135)
T ss_dssp EEECCGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCGGGCCHHHHHHHH
T ss_pred EEECCCCCCCHHHHhHhHHhHHHHHHHHhhccCCceeEEEEcCChhhcCHHHHHHhh
Confidence 999999 9999999999999999999998 876 89999999999999999987
No 16
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=236.61 Aligned_cols=127 Identities=24% Similarity=0.451 Sum_probs=115.5
Q ss_pred ccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCC----CHHHHhhcC-CCCCeeeEEEEEEeecCCC
Q 031876 17 SSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAE----SYDDFTASL-PDNDCRYAVYDFDFVTSEN 91 (151)
Q Consensus 17 ~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~----~~~el~~~L-~~~~pry~~~~~~~~~~~g 91 (151)
+|||.+++||+++|+++|.++ +|||+|+|+++ +|+++++++... +|++|++.| |+++|||++||+++.+.+
T Consensus 1 ~SGi~v~~e~~~~f~~~k~~k-~r~ii~~i~~~--~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~- 76 (134)
T 2vac_A 1 SMGIHATEELKEFFAKARAGS-VRLIKVVIEDE--QLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQ- 76 (134)
T ss_dssp CCSCEECHHHHHHHHHHHHSS-CSEEEEEEETT--EEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT-
T ss_pred CCCcEeCHHHHHHHHHHhcCC-eEEEEEEecCC--EEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCC-
Confidence 589999999999999999998 99999999875 899988876543 478999998 699999999999998765
Q ss_pred CccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeE--EEEeCCcCCCCHHHHHhh
Q 031876 92 CQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHY--EIQATDPSEMDLEVIRDR 149 (151)
Q Consensus 92 ~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~--~i~a~d~~el~~~~i~~~ 149 (151)
++||+||+|||++||+|.||+|||+|++|++.|+|++. ++||+|++||+++.+.++
T Consensus 77 --~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~~~~~ 134 (134)
T 2vac_A 77 --GFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGTVKDDLSFAGYQKH 134 (134)
T ss_dssp --EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHHC
T ss_pred --CceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCeeeEEEEeCChHHcCHHHHhcC
Confidence 48999999999999999999999999999999999887 999999999999998763
No 17
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=100.00 E-value=1.2e-38 Score=230.33 Aligned_cols=129 Identities=21% Similarity=0.391 Sum_probs=117.3
Q ss_pred ccccCCccC---HHHHHHHHHHhhcC--ceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecC
Q 031876 15 NASSGMGVA---DHSKSTYLELQRKK--VHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTS 89 (151)
Q Consensus 15 m~~SGi~i~---~e~~~a~~~lk~~~--~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~ 89 (151)
|++++|.++ ++|+++|++++.++ .+||++|+|+. +++|+++++|+ +|+||.+.||+++|||++||++ .
T Consensus 1 ~~m~~i~l~~~~~e~~~a~~~~~~~~~~~~~~ii~~i~~-~~~i~v~~~g~---~~~el~~~l~~~~~rY~~~~~~---~ 73 (141)
T 1hqz_1 1 MALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNA-KKEYEPESTGS---SFHDFLQLFDETKVQYGLARVS---P 73 (141)
T ss_dssp --CCCCCCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECT-TSCEEEEEEES---CHHHHHTCCCTTSCEEEEEEEC---C
T ss_pred CcccccccCCCCHHHHHHHHHHHhCCCCCceEEEEEEcC-CCEEEEEeecC---CHHHHHhhCCCCceEEEEEEEe---c
Confidence 667788874 99999999999985 59999999998 56899998864 8999999999999999999997 4
Q ss_pred CCCccccEEEEEEcCCCCCcchhhhhhhhHHHHHH-hcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 90 ENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRR-ELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 90 ~g~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~-~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
+|+.++|++||+|||++||+|+||+|||+|++|++ .|+|+++++||+|++||+++.|.+++
T Consensus 74 ~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~~i~a~~~~el~~e~i~~kl 135 (141)
T 1hqz_1 74 PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKI 135 (141)
T ss_dssp TTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEEEEESSGGGGCHHHHHHHH
T ss_pred CCCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEEEEEECChHHCCHHHHHHHH
Confidence 56789999999999999999999999999999997 99999999999999999999999986
No 18
>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A
Probab=100.00 E-value=1e-37 Score=230.92 Aligned_cols=132 Identities=19% Similarity=0.382 Sum_probs=120.5
Q ss_pred cccCC--ccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCc
Q 031876 16 ASSGM--GVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQ 93 (151)
Q Consensus 16 ~~SGi--~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~ 93 (151)
.++|| +|+++|+++|++||.++ ++||+|+|+.++++|+|+++ . +.+|++|.+.||+++|||++|||+++++ |+.
T Consensus 16 ~~~gv~~~v~~e~~~a~~~lk~~~-~~~iifkId~~~e~I~v~~~-~-~~~~~df~~~Lp~~~pRY~vyd~~~~~~-g~~ 91 (164)
T 3daw_B 16 TLQGVAFPISRDAFQALEKLSKKQ-LNYVQLEIDIKNETIILANT-E-NTELRDLPKRIPKDSARYHFFLYKHSHE-GDY 91 (164)
T ss_dssp --CCCCCCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEEC-C-CCCGGGSGGGSCSSSCEEEEEEEEEEET-TEE
T ss_pred ccCcceEEECHHHHHHHHHHHcCC-ceEEEEEEeCCCCEEEEEeC-C-CCCHHHHHHhCCccCceEEEEecccccC-CCc
Confidence 45677 69999999999999985 89999999999899999987 3 5899999999999999999999999877 656
Q ss_pred cccEEEEEEcCC-CCCcchhhhhhhhHHHHHHhcC---Ce--eEEEEeCCcCCCCHHHHHhhhC
Q 031876 94 KSKIFFIAWSPD-VSRIRAKMLYATSKDRFRRELD---GI--HYEIQATDPSEMDLEVIRDRAR 151 (151)
Q Consensus 94 ~~k~vfI~w~Pd-~a~vk~KMlYassk~~l~~~l~---gi--~~~i~a~d~~el~~~~i~~~~~ 151 (151)
..+++||+|||+ +|++|.||+|||+|+.|++.|. |+ .++|||+|++||++++|.++|.
T Consensus 92 ~~~~ifi~~~P~~~a~ik~kMlYASsK~~l~~~l~~~~Gi~i~k~iea~d~~Elt~e~l~ekl~ 155 (164)
T 3daw_B 92 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH 155 (164)
T ss_dssp EEEEEEEEECCSTTSCHHHHHHHHHTHHHHHHHHHHHHCCCEEEEEEESSSSSCCHHHHHHHHS
T ss_pred cccEEEEEEcCCCCCCHHHHHHHHHhHHHHHHHHhhccCCceeEEEEeCChHHcCHHHHHhHhC
Confidence 778999999999 9999999999999999999998 87 8999999999999999999873
No 19
>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A
Probab=100.00 E-value=1.5e-39 Score=230.76 Aligned_cols=117 Identities=24% Similarity=0.509 Sum_probs=106.7
Q ss_pred ccccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCC---eeeEEEEEEeecCCC
Q 031876 15 NASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDND---CRYAVYDFDFVTSEN 91 (151)
Q Consensus 15 m~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~---pry~~~~~~~~~~~g 91 (151)
+|+|||.+++||+++|++||.++++|||+|+|++ ++|+++++++ ..+|++|.+.||+++ |||++||+
T Consensus 2 ~m~SGi~vs~e~~~~f~~lk~~k~~~~ii~kI~~--~~ivv~~~~~-~~~~~~f~~~Lp~~~~~~prY~vy~~------- 71 (124)
T 3q2b_A 2 SMISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQN--CEIIIHSKGA-STTLTELVQSIDKNNEIQCAYVVFDA------- 71 (124)
T ss_dssp --CCSCEECHHHHHHHHHHHHHTSSEEEEEEEET--TEEEEEEEEE-CSCHHHHHHHHHHCTTCSEEEEEEEC-------
T ss_pred CCCCCCccCHHHHHHHHHHhcCCCcEEEEEEEcC--CEEEEeccCC-CCCHHHHHHHccccCCCCcEEEEEec-------
Confidence 4789999999999999999998889999999997 4899988765 478999999999989 99999998
Q ss_pred CccccEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCee-EEEEeCCcCCCCH
Q 031876 92 CQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIH-YEIQATDPSEMDL 143 (151)
Q Consensus 92 ~~~~k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~-~~i~a~d~~el~~ 143 (151)
+++++||+|||++||+|+||+|||+|++|++.|+|++ .+++|+|++||++
T Consensus 72 --~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~~~i~a~d~~dlt~ 122 (124)
T 3q2b_A 72 --VSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVNVLTSVIESAQDVAD 122 (124)
T ss_dssp --SSCEEEEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEECCSCBCSHHHHTT
T ss_pred --CCCEEEEEECCCCCChhHhhhhHHHHHHHHHHhCCCceEEEEecCHHHccc
Confidence 4699999999999999999999999999999999998 5899999999874
No 20
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=100.00 E-value=1e-37 Score=225.35 Aligned_cols=116 Identities=37% Similarity=0.737 Sum_probs=107.0
Q ss_pred cccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccc
Q 031876 16 ASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKS 95 (151)
Q Consensus 16 ~~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~ 95 (151)
|+|||.+++||+++|+++|.++.+|||+|+|+. ++|+++++++ + +|++|.+.||+++|||++|| +| +
T Consensus 22 m~sGi~vs~e~~~af~~lk~~k~~~~ii~~I~~--~eivv~~~g~-~-~~~el~~~Lp~~~prY~~y~------dg---~ 88 (139)
T 2l72_A 22 MASGMGVDENCVARFNELKIRKTVKWIVFKIEN--TKIVVEKDGK-G-NADEFRGALPANDCRFGVYD------CG---N 88 (139)
T ss_dssp CCTTCEECHHHHHHHHHHTTTTCCCEEEEEEET--TEEEEEEEES-S-HHHHHHHHCCCCSCCEEEEE------CS---S
T ss_pred ccCCCCcCHHHHHHHHHHhCCCCeeEEEEEEcC--CEEEEeecCC-C-CHHHHHHhCCCCCcEEEEEc------CC---C
Confidence 579999999999999999998779999999998 5788888776 4 89999999999999999999 34 7
Q ss_pred cEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEE-EEeCCcCCCCHH
Q 031876 96 KIFFIAWSPDVSRIRAKMLYATSKDRFRRELDGIHYE-IQATDPSEMDLE 144 (151)
Q Consensus 96 k~vfI~w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~-i~a~d~~el~~~ 144 (151)
|++||+|||++||+|+||+|||+|++|++.|+|++.. ++|++++||+++
T Consensus 89 k~vFI~w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v~~iea~~~~DLte~ 138 (139)
T 2l72_A 89 KIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATAVALEAHEMGDLAPL 138 (139)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCSCCSCEEEESSTTTTSCC
T ss_pred cEEEEEECCCCCChhHeeehHhhHHHHHHHhCCceEEEEEeCCHHHCccC
Confidence 9999999999999999999999999999999998764 899999999875
No 21
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=222.40 Aligned_cols=122 Identities=18% Similarity=0.302 Sum_probs=114.2
Q ss_pred HHHHHHHHHHhhcCc-eeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccEEEEEE
Q 031876 24 DHSKSTYLELQRKKV-HRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAW 102 (151)
Q Consensus 24 ~e~~~a~~~lk~~~~-~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~vfI~w 102 (151)
|+|+++|++++.++. +||++|+|+++.++|+++.+|+ .+|+||.+.||+++|||++||+++ ++++++|++||.|
T Consensus 17 ~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~--~~~~e~~~~L~~~~~~Y~~~r~~~---~~~~~~K~vfI~W 91 (146)
T 1x67_A 17 PALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGE--GGLEEMVEELNSGKVMYAFCRVKD---PNSGLPKFVLINW 91 (146)
T ss_dssp HHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEES--SCHHHHHHHCCTTSEEEEEEEEEC---SSSCSEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccC--CCHHHHHhhCCCCceEEEEEEEEc---CCCCeeeEEEEEE
Confidence 999999999999874 9999999998777899998874 589999999999999999999974 3567999999999
Q ss_pred cCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 103 SPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 103 ~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
|||++|+|.||+||+++++|++.|+|+|.+|||++++||+++.|.+++
T Consensus 92 ~pd~a~v~~Km~yas~k~~lk~~l~g~~~ei~at~~~el~~~~i~~k~ 139 (146)
T 1x67_A 92 TGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKV 139 (146)
T ss_dssp ECTTSCHHHHHHHHHHHHHHHHHTTTEEEEECCCSGGGGCHHHHHHHH
T ss_pred CCCCCChhheeeehhhHHHHHHhcCCcEEEEEeCChHHCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999986
No 22
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=100.00 E-value=1.3e-33 Score=204.15 Aligned_cols=122 Identities=18% Similarity=0.300 Sum_probs=113.6
Q ss_pred CHHHHHHHHHHhhcC-ceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccEEEEE
Q 031876 23 ADHSKSTYLELQRKK-VHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIA 101 (151)
Q Consensus 23 ~~e~~~a~~~lk~~~-~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~vfI~ 101 (151)
+|+|.++|++++.++ .++|++|+++.+ +|+|+++|+ +|+||.+.||+++|||++||+. .++++++++|++||.
T Consensus 6 ~~~~~~a~~~v~~~~~~~~wilf~~~~~--~i~v~~~G~---g~~e~~~~L~~~~~~Ya~~r~~-~~~~~~~~~K~vfI~ 79 (141)
T 1t3y_A 6 KEACRAAYNLVRDDGSAVIWVTFKYDGS--TIVPGEQGA---EYQHFIQQCTDDVRLFAFVRFT-TGDAMSKRSKFALIT 79 (141)
T ss_dssp HHHHHHHHHHHHCTTSSCCEEEEEEETT--EEEEEEEES---SHHHHHHHCCTTCEEEEEEEEE-ECSGGGCEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCceEEEEEEcCC--EEEEEecCC---CHHHHHhhCCCCceEEEEEEEE-ecCCCCceeeEEEEE
Confidence 699999999999987 499999999873 599998875 4999999999999999999996 566778899999999
Q ss_pred EcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCcCCCCHHHHHhhh
Q 031876 102 WSPDVSRIRAKMLYATSKDRFRRELDGIHYEIQATDPSEMDLEVIRDRA 150 (151)
Q Consensus 102 w~Pd~a~vk~KMlYassk~~l~~~l~gi~~~i~a~d~~el~~~~i~~~~ 150 (151)
|||+++|++.||+||+++++|++.|.|+|.+|||+|++||+++.|.+++
T Consensus 80 W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~i~a~d~~el~~~~I~~kv 128 (141)
T 1t3y_A 80 WIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSEL 128 (141)
T ss_dssp EECTTSCHHHHHHHHHHHHHHTTTSCCCSEEEEECSGGGGSHHHHHHHH
T ss_pred ECCCCCCHHHhhhHHHHHHHHHHHhcccEEEEEeCChHHCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999986
No 23
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=63.33 E-value=32 Score=23.32 Aligned_cols=86 Identities=12% Similarity=0.153 Sum_probs=54.8
Q ss_pred HHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccEEEEEEcCCCC
Q 031876 28 STYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVS 107 (151)
Q Consensus 28 ~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a 107 (151)
.+|++... ....-|.+|++. +.+.+.+ +....+-+.+ ||++.. .|....| +....+-+|+...+
T Consensus 9 ~~~~~~g~--~~gl~vWrIe~~-~~~~vp~---------~~~G~Fy~gd-~YIvl~-ty~~~~g--~~~~~i~~W~G~~s 72 (128)
T 3cip_G 9 PEFLKAGK--EPGLQIWRVEKF-DLVPVPT---------NLYGDFFTGD-AYVILK-TVQLRNG--NLQYDLHYWLGNEC 72 (128)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCG---------GGTTEEETTC-EEEEEE-EEECTTS--CEEEEEEEEECTTC
T ss_pred hhHHhcCC--CCCeEEEEEeCC-EEEECCh---------HHcCeecCCC-eEEEEE-EEecCCC--ceEEEEEEEcCCCC
Confidence 35666533 355778888864 3333322 1233455555 577643 3323322 44677889999999
Q ss_pred CcchhhhhhhhHHHHHHhcCCe
Q 031876 108 RIRAKMLYATSKDRFRRELDGI 129 (151)
Q Consensus 108 ~vk~KMlYassk~~l~~~l~gi 129 (151)
+..++...|.--..|.+.|+|.
T Consensus 73 s~de~g~Aa~~aveLd~~lgg~ 94 (128)
T 3cip_G 73 SQDESGAAAIFTVQLDDYLNGR 94 (128)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTC
T ss_pred CcchHHHHHHHHHHHHHHcCCC
Confidence 9999988888888888999874
No 24
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=61.80 E-value=35 Score=23.92 Aligned_cols=86 Identities=12% Similarity=0.146 Sum_probs=54.4
Q ss_pred HHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccEEEEEEcCCCC
Q 031876 28 STYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVS 107 (151)
Q Consensus 28 ~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a 107 (151)
.+|++... ....-|.+|++. +.+.+.+. ....|-+.+ ||++.. .|....| +....+-+|+...+
T Consensus 28 ~~f~~~g~--~~gl~VWrIe~~-~~v~vp~~---------~~G~FysgD-~YIVl~-ty~~~~g--~~~~~IyfW~G~~s 91 (150)
T 2ff3_A 28 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTN---------LYGDFFTGD-AYVILK-TVQLRNG--NLQYDLHYWLGNEC 91 (150)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGG---------GTTEEETTS-EEEEEE-EEECTTS--SEEEEEEEEECTTC
T ss_pred hhhhccCC--CCCeEEEEEeCC-EEEECChH---------HcCeecCCC-eEEEEE-EEecCCC--ceEEEEEEEeCCCC
Confidence 36666543 355777888863 33333221 223454555 577643 3322322 44678889999999
Q ss_pred CcchhhhhhhhHHHHHHhcCCe
Q 031876 108 RIRAKMLYATSKDRFRRELDGI 129 (151)
Q Consensus 108 ~vk~KMlYassk~~l~~~l~gi 129 (151)
+..++...|.--..|.+.++|.
T Consensus 92 s~de~gaAA~~aveLd~~lgg~ 113 (150)
T 2ff3_A 92 SQDESGAAAIFTVQLDDYLNGR 113 (150)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTC
T ss_pred CchhHHHHHHHHHHHHHHcCCC
Confidence 9999988877777888888764
No 25
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=60.99 E-value=33 Score=23.16 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=48.9
Q ss_pred eeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccEEEEEEcCCCCCcchhhhhhhh
Q 031876 39 HRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATS 118 (151)
Q Consensus 39 ~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a~vk~KMlYass 118 (151)
...-|.+|++. +.+.+.+. ....+-+.+ ||++.. .+.. .| +....+-+|+...++..++..-|.-
T Consensus 16 ~~l~vWrIe~~-~~~~vp~~---------~~G~Fy~gd-~YIvl~-t~~~-~g--~~~~~i~~W~G~~ss~de~g~Aa~~ 80 (126)
T 2vik_A 16 PGIQIWRIENM-EMVPVPTK---------SYGNFYEGD-CYVLLS-TRKT-GS--GFSYNIHYWLGKNSSQDEQGAAAIY 80 (126)
T ss_dssp CEEEEEECGGG-SCCEECTT---------TTTCCCSSS-CEEEEE-EEEC-SS--SEEEEEEEEECTTSCHHHHHHHHHH
T ss_pred CCEEEEEEeCC-EEEECChh---------hcCeeCCCC-eEEEEE-eccC-CC--ceeEEEEEEeCCCCCchhHHHHHHH
Confidence 45566677643 23333221 123455555 477754 3432 22 4467788999999999999888887
Q ss_pred HHHHHHhcCCe
Q 031876 119 KDRFRRELDGI 129 (151)
Q Consensus 119 k~~l~~~l~gi 129 (151)
-..|.+.++|.
T Consensus 81 aveLd~~lgg~ 91 (126)
T 2vik_A 81 TTQMDEYLGSV 91 (126)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHHHHcCCC
Confidence 78888888773
No 26
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=59.96 E-value=40 Score=23.41 Aligned_cols=86 Identities=12% Similarity=0.146 Sum_probs=54.4
Q ss_pred HHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccEEEEEEcCCCC
Q 031876 28 STYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVS 107 (151)
Q Consensus 28 ~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a 107 (151)
.+|++... ....-|.+|++. +.+.+.+. ....|-+.+ ||++.. .|....| +....+-+|+...+
T Consensus 6 ~~f~~~g~--~~gl~VWrIe~~-~~~~vp~~---------~~G~Fy~gd-~YIvl~-ty~~~~g--~~~~~i~~W~G~~s 69 (147)
T 1t44_G 6 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTN---------LYGDFFTGD-AYVILK-TVQLRNG--NLQYDLHYWLGNEC 69 (147)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGG---------GTTEEETTC-EEEEEE-EEECTTS--CEEEEEEEEECTTC
T ss_pred hhhhccCC--CCCeEEEEEeCC-EEEECChH---------HcCeecCCC-eEEEEE-EEecCCC--ceEEEEEEEeCCCC
Confidence 35665533 355778888864 33333221 123454555 577643 3323322 44678889999999
Q ss_pred CcchhhhhhhhHHHHHHhcCCe
Q 031876 108 RIRAKMLYATSKDRFRRELDGI 129 (151)
Q Consensus 108 ~vk~KMlYassk~~l~~~l~gi 129 (151)
+..++...|.--..|.+.|+|.
T Consensus 70 s~de~g~Aa~~aveLd~~lgg~ 91 (147)
T 1t44_G 70 SQDESGAAAIFTVQLDDYLNGR 91 (147)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTC
T ss_pred ChhHHHHHHHHHHHHHHHcCCC
Confidence 9999988888778888888764
No 27
>2k5j_A Uncharacterized protein YIIF; structure, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Shigella flexneri 5 str}
Probab=43.87 E-value=10 Score=23.60 Aligned_cols=26 Identities=4% Similarity=-0.025 Sum_probs=21.3
Q ss_pred ccccccccCCccCHHHHHHHHHHhhc
Q 031876 11 GCQTNASSGMGVADHSKSTYLELQRK 36 (151)
Q Consensus 11 ~~~~m~~SGi~i~~e~~~a~~~lk~~ 36 (151)
.+|.|+..+|.+++++.+.++.+...
T Consensus 5 ~~m~m~risI~Lpdel~~~Ld~la~~ 30 (80)
T 2k5j_A 5 AGIDMGRILLDLSNEVIKQLDDLEVQ 30 (80)
T ss_dssp SSTTCCEEEEEECHHHHHHHHHHHHH
T ss_pred ccceeEEEEEECCHHHHHHHHHHHHH
Confidence 45667778899999999999988543
No 28
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=34.25 E-value=1.2e+02 Score=23.44 Aligned_cols=86 Identities=12% Similarity=0.158 Sum_probs=53.1
Q ss_pred HHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEEEEeecCCCCccccEEEEEEcCCCC
Q 031876 28 STYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVS 107 (151)
Q Consensus 28 ~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a 107 (151)
.+|+..-...+ .-|.+|++- +.+.+.+ +....+=+.+ ||+++. .|....| +..+.+-+|+...+
T Consensus 24 ~~~~~~g~~~G--l~iWrIe~~-~~~~v~~---------~~~G~Fy~gd-~Yivl~-t~~~~~g--~~~~~i~~W~G~~s 87 (297)
T 3tu5_B 24 PEFLKAGKEPG--LQIWRVEKF-DLVPVPT---------NLYGDFFTGD-AYVILK-TVQLRNG--NLQYDLHYWLGNEC 87 (297)
T ss_dssp HHHHHTTSSSE--EEEEEEETT-EEEECCG---------GGTTEEETTC-EEEEEE-EEECTTS--CEEEEEEEEECTTC
T ss_pred hhHhccCCCCc--eEEEEEcCC-EEEECCH---------HHcCeecCCC-eEEEeE-eEECCCC--ceeEEEEEEeCCCC
Confidence 56666544332 556677763 2332322 1233444545 587763 2333333 34567779999999
Q ss_pred CcchhhhhhhhHHHHHHhcCCe
Q 031876 108 RIRAKMLYATSKDRFRRELDGI 129 (151)
Q Consensus 108 ~vk~KMlYassk~~l~~~l~gi 129 (151)
+..++...|.--..|.+.|+|-
T Consensus 88 s~de~g~aa~~av~Ld~~lgg~ 109 (297)
T 3tu5_B 88 SQDESGAAAIFTVQLDDYLNGR 109 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTC
T ss_pred ChhHHHHHHHHHHHHHHHcCCC
Confidence 9999988888778888999873
No 29
>2p2e_A Putative Fe-S biosynthesis protein; hypothetical protein, beta-barrel, 10399L structural genomics, protein structure initiative, PSI-2; 2.48A {Lactobacillus salivarius} SCOP: b.124.1.1
Probab=33.33 E-value=48 Score=22.32 Aligned_cols=27 Identities=11% Similarity=0.241 Sum_probs=22.2
Q ss_pred CccCHHHHHHHHHHhhcCceeEEEEEEe
Q 031876 20 MGVADHSKSTYLELQRKKVHRYVIFKID 47 (151)
Q Consensus 20 i~i~~e~~~a~~~lk~~~~~~~iif~i~ 47 (151)
|.+++.+.+.++++..... +.+.++++
T Consensus 5 ItlT~~A~~~l~~~l~~~~-~~l~Lr~~ 31 (128)
T 2p2e_A 5 ITVTDDAAKKLQRYTDDSN-AVLLLDFD 31 (128)
T ss_dssp EEECHHHHHHHHHHHTCTT-EEEEEEEC
T ss_pred EEECHHHHHHHHHHHhcCC-ceEEEEEe
Confidence 8999999999999977653 35678888
No 30
>2ay0_A Bifunctional PUTA protein; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.43.1.11
Probab=31.09 E-value=20 Score=20.84 Aligned_cols=25 Identities=8% Similarity=0.133 Sum_probs=19.1
Q ss_pred ccccccCCccCHHHHHHHHHHhhcC
Q 031876 13 QTNASSGMGVADHSKSTYLELQRKK 37 (151)
Q Consensus 13 ~~m~~SGi~i~~e~~~a~~~lk~~~ 37 (151)
|+|..-+|.+++++.+.++.+....
T Consensus 1 M~~~~~svrL~~el~~rL~~lA~~~ 25 (58)
T 2ay0_A 1 MGTTTMGVMLDDATRERIKSAATRI 25 (58)
T ss_dssp --CEEEEEEECHHHHHHHHHHHHHT
T ss_pred CCCcceEeECCHHHHHHHHHHHHHH
Confidence 4566778999999999999986543
No 31
>2khi_A 30S ribosomal protein S1; acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=30.94 E-value=18 Score=23.73 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=34.8
Q ss_pred EEEeeCccccccc-ccCCccCHHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHh
Q 031876 4 LFITFGFGCQTNA-SSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFT 69 (151)
Q Consensus 4 ~~~~~~~~~~~m~-~SGi~i~~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~ 69 (151)
+|+-++.|..++. .|-+..+......-+.++.+...+..+..++.+..+|.+.-......+|+++.
T Consensus 46 ~FV~l~~~~~Glvhisel~~~~~~~~~~~~~~vGd~V~vkV~~vd~~~~rI~lslk~~~~~p~~~~~ 112 (115)
T 2khi_A 46 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 112 (115)
T ss_dssp EEEECSTTCEEEEETTSSSCSSTTCSSTTTCCTTCEEEEEEEEEETTTTEEEECCCCCCSSCCCCCC
T ss_pred EEEEECCCCEEEEEHHHCCccccccCcccEECCCCEEEEEEEEEECCCCEEEEEEEecCcCHHHHHH
Confidence 4667776655544 33333211111111235556567888889998777888753322234555443
No 32
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=28.24 E-value=1.2e+02 Score=19.59 Aligned_cols=59 Identities=15% Similarity=0.218 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhhcCceeEEEEEEeCCCcEEEEeeCCCCCCCHHHHhhcCCCCCeeeEEEE
Q 031876 24 DHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPDNDCRYAVYD 83 (151)
Q Consensus 24 ~e~~~a~~~lk~~~~~~~iif~i~~~~~~i~l~~~~~~~~~~~el~~~L~~~~pry~~~~ 83 (151)
-++..++.++..-.+.+..+..++.+.+.+.+.=.|. +.+|+++.+.+..-.+.-+=.|
T Consensus 22 ~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~-~id~d~I~~~IE~~Gg~IHSID 80 (97)
T 2raq_A 22 PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGN-DLDFDEITRAIESYGGSIHSVD 80 (97)
T ss_dssp HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECS-SCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCCeEEeee
Confidence 3556666677666668888999999887777766564 7889998877765554433333
No 33
>1ncq_A Coat protein VP1; HRV, pleconaril, icosahedral virus; HET: W11; 2.50A {Human rhinovirus 14} SCOP: b.121.4.1 PDB: 1d3i_1* 1hrv_1* 1hri_1* 1na1_A* 1k5m_A* 1r08_1* 1r09_1* 1rvf_1 1vrh_1* 2hwb_1* 2hwc_1* 2r04_1* 2r06_1* 2r07_1* 2rm2_1* 2rr1_1* 2rs1_1* 2rs3_1* 2rs5_1* 4rhv_1 ...
Probab=27.63 E-value=86 Score=24.28 Aligned_cols=15 Identities=7% Similarity=0.045 Sum_probs=12.3
Q ss_pred EEEEEEcCCCCCcch
Q 031876 97 IFFIAWSPDVSRIRA 111 (151)
Q Consensus 97 ~vfI~w~Pd~a~vk~ 111 (151)
.+-|+|+|.+||+..
T Consensus 147 ~~qvmyvPpGaP~p~ 161 (289)
T 1ncq_A 147 VVQAMYVPPGAPNPK 161 (289)
T ss_dssp EEEEEEECTTSCCCC
T ss_pred EEEEEEeCCCCCCCc
Confidence 456899999999765
No 34
>3vbh_A EV71, genome polyprotein, capsid protein VP1; hand-foot-and-mouth disease, enterovirus uncoating, P factor, adaptor-sensor; HET: SPH; 2.30A {Human enterovirus 71} PDB: 3vbf_A* 3vbo_A 3vbs_A* 4aed_A* 3vbr_A 3vbu_A
Probab=26.77 E-value=91 Score=24.33 Aligned_cols=45 Identities=11% Similarity=0.194 Sum_probs=25.5
Q ss_pred HHHHhhcCCCCCeeeEEEEEEeec----CCCCccccEEEEEEcCCCCCcch
Q 031876 65 YDDFTASLPDNDCRYAVYDFDFVT----SENCQKSKIFFIAWSPDVSRIRA 111 (151)
Q Consensus 65 ~~el~~~L~~~~pry~~~~~~~~~----~~g~~~~k~vfI~w~Pd~a~vk~ 111 (151)
..++.-+|. ---|.-+|++++- ..+....-.+-|+|+|.+||+..
T Consensus 116 ~~QlRrKLe--~FTY~RfDlEvT~V~t~~~~~~~~~~~QvmyvPpGaP~p~ 164 (297)
T 3vbh_A 116 YAQMRRKVE--LFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPD 164 (297)
T ss_dssp SHHHHHHHT--TEEEEEEEEEEEEEEECTTSCCCCCEEEEEEECTTSCCCC
T ss_pred HHHHHhhhc--eeEEEeeeeEEEEEEecCCCCCCceEEEEEEcCCCCCCCC
Confidence 345555552 2346666666541 12211233466899999999754
No 35
>1z7s_1 Human coxsackievirus A21; picornavirus, capsid protein, viral protein, icosahedral virus; HET: MYR G; 3.20A {Human coxsackievirus A21} PDB: 1z7z_1*
Probab=22.90 E-value=1.2e+02 Score=23.64 Aligned_cols=15 Identities=13% Similarity=0.286 Sum_probs=12.3
Q ss_pred EEEEEEcCCCCCcch
Q 031876 97 IFFIAWSPDVSRIRA 111 (151)
Q Consensus 97 ~vfI~w~Pd~a~vk~ 111 (151)
..-|+|+|.+||+..
T Consensus 149 ~~qvmyvPpGAP~p~ 163 (298)
T 1z7s_1 149 VYQIMYIPPGAPRPS 163 (298)
T ss_dssp EEEEEEECTTSCCCS
T ss_pred EEEEEEcCCCCCCCC
Confidence 346899999999875
No 36
>1tme_1 Theiler'S murine encephalomyelitis virus (subunit VP1); icosahedral virus; 2.80A {Theiler} SCOP: b.121.4.1 PDB: 1tmf_1
Probab=22.90 E-value=88 Score=24.12 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=20.4
Q ss_pred eeEEEEEEeecCCCCccccEEEEEEcCCCCCcc
Q 031876 78 RYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIR 110 (151)
Q Consensus 78 ry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a~vk 110 (151)
-|.-+|++.+-......+-..-|+|+|.+||+.
T Consensus 121 TY~rfDLEvTvv~~~~~~~~~qvmyvPpGaP~p 153 (274)
T 1tme_1 121 TYYKCDLEVTVSALGTDTVASVLRWAPTGAPAD 153 (274)
T ss_dssp EEEEEEEEEEEEECSCSCCEEEEEEECTTCCCC
T ss_pred eEecccEEEEEEEcCCCCceEEEEEcCCCCCCC
Confidence 566677766432211112245689999999987
No 37
>1fmd_1 Foot-and-mouth disease virus (subunit VP1); icosahedral virus; 3.50A {Foot-and-mouth disease virus} SCOP: b.121.4.1 PDB: 1qgc_1 1qgc_5
Probab=22.44 E-value=69 Score=23.70 Aligned_cols=29 Identities=17% Similarity=0.415 Sum_probs=20.5
Q ss_pred eeeEEEEEEeecCCCCccccEEEEEEcCCCCCcch
Q 031876 77 CRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRA 111 (151)
Q Consensus 77 pry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a~vk~ 111 (151)
.-|..+|++.+-.. -.-|+|+|.+||+..
T Consensus 69 FTY~rfDlEvtvv~------~~qvmyvPpGaP~p~ 97 (208)
T 1fmd_1 69 ATYYFSDLEIAVTH------TGKLTWVPNGAPVSA 97 (208)
T ss_dssp EEEEEEEEEEEEEE------EEEEEEECTTCCGGG
T ss_pred cEEEeccEEEEEEE------eeEEEEECCCCCchh
Confidence 35777777765321 157999999999875
No 38
>2mev_1 Mengo virus coat protein (subunit VP1); cardio picornavirus coat protein, icosahedral virus; 3.00A {Mengo virus} SCOP: b.121.4.1 PDB: 1mec_1
Probab=21.09 E-value=86 Score=24.22 Aligned_cols=33 Identities=15% Similarity=0.366 Sum_probs=19.6
Q ss_pred eeEEEEEEeecCCCCccccEEEEEEcCCCCCcc
Q 031876 78 RYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIR 110 (151)
Q Consensus 78 ry~~~~~~~~~~~g~~~~k~vfI~w~Pd~a~vk 110 (151)
-|..+|++.+-.......--.-|+|+|.+||+.
T Consensus 121 TY~rfDLEvtvv~~~~~~~~~~vmyvPpGaP~~ 153 (277)
T 2mev_1 121 VYYKCDLEVTLSPHTSGAHGLLVRWCPTGTPTK 153 (277)
T ss_dssp SEEEEEEEEEEEESCSSCCCEEEEEECTTSCCC
T ss_pred eEecccEEEEEEEcCCCCcceEEEECCCCCCCC
Confidence 477777776532111011123499999999986
No 39
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=21.01 E-value=30 Score=19.08 Aligned_cols=24 Identities=8% Similarity=0.201 Sum_probs=18.3
Q ss_pred ccccccCCccCHHHHHHHHHHhhc
Q 031876 13 QTNASSGMGVADHSKSTYLELQRK 36 (151)
Q Consensus 13 ~~m~~SGi~i~~e~~~a~~~lk~~ 36 (151)
|+|..-+|.+++++.+.++.+...
T Consensus 1 M~~~~~sirl~~~l~~~l~~lA~~ 24 (52)
T 2gpe_A 1 MGTTTMGVKLDDATRERIKSAATR 24 (52)
T ss_dssp -CEEEEEEEEEHHHHHHHHHHHHH
T ss_pred CCcceEEEECCHHHHHHHHHHHHH
Confidence 345566789999999999988554
Done!