BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031881
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9AKM6|FER2_RICMO 2Fe-2S ferredoxin OS=Rickettsia montana GN=fdxB PE=3 SV=1
Length = 112
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHYW 133
I VTF+ DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI+ ++
Sbjct: 5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFY 60
>sp|Q92J08|FER2_RICCN 2Fe-2S ferredoxin OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=fdxB PE=3 SV=1
Length = 112
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHYW 133
I VTF+ DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI+ ++
Sbjct: 5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFY 60
>sp|Q9AKH1|FER2_RICRI 2Fe-2S ferredoxin OS=Rickettsia rickettsii GN=fdxB PE=3 SV=1
Length = 112
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHYW 133
I VTF+ DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI+ ++
Sbjct: 5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFY 60
>sp|Q4UKL2|FER2_RICFE 2Fe-2S ferredoxin OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=fdxB PE=3 SV=1
Length = 112
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHYW 133
I VTF+ DGEEK ++ P+G+S+LE H ND++LEGACEGSLAC+TCHVI+ ++
Sbjct: 5 IKVTFIVNDGEEKTVEAPIGLSILEITHSNDLDLEGACEGSLACATCHVILEEEFY 60
>sp|Q1RJ69|FER2_RICBR 2Fe-2S ferredoxin OS=Rickettsia bellii (strain RML369-C) GN=fdxB
PE=3 SV=1
Length = 111
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHYW 133
I VTFV +GEEK I+ P+G+S+LE AH N I+LEGACEGSLAC+TCHVI+ ++
Sbjct: 5 IKVTFVINNGEEKIIEAPLGLSILEVAHSNSIDLEGACEGSLACATCHVILEEEFY 60
>sp|Q9ZDW6|FER2_RICPR 2Fe-2S ferredoxin OS=Rickettsia prowazekii (strain Madrid E)
GN=fdxB PE=3 SV=1
Length = 112
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHYW 133
I VTF+ D EE+ ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHV++ ++
Sbjct: 5 IKVTFIINDEEERTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVMLEEEFY 60
>sp|Q9AKC4|FER2_RICTY 2Fe-2S ferredoxin OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=fdxB PE=3 SV=1
Length = 117
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHYW 133
I VTF+ D EEK ++ P+G+S+LE AH N+++LEGACEGSLAC+TCHV++ ++
Sbjct: 5 IKVTFIINDEEEKTVEAPIGLSILEIAHSNNLDLEGACEGSLACATCHVMLEEEFY 60
>sp|Q6P4F2|ADXL_HUMAN Adrenodoxin-like protein, mitochondrial OS=Homo sapiens GN=FDX1L
PE=1 SV=1
Length = 183
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 13 MVKELSRGGCTSISRTGCTRQHW--RPFIELQSVPRVFQGSIFQKYPHFSTTAENDASHG 70
M ++RGG ++ R W RP S V G+ + S A + + G
Sbjct: 1 MAASMARGGVSARVLLQAARGTWWNRPGGTSGSGEGVALGTTRKFQATGSRPAGEEDAGG 60
Query: 71 SNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
+ D++NV FVD+ G+ + VG ++L A + ++LEGACE SLACSTCHV V
Sbjct: 61 PERPGDVVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGVDLEGACEASLACSTCHVYV 118
>sp|P37193|ADXH_DROME Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster
GN=Fdxh PE=2 SV=3
Length = 172
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 76 DMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHY 132
+++N+T+VDKDG+ ++ VG ++L AH + IE+EGACE SLAC+TCHV V Y
Sbjct: 55 EIVNITYVDKDGKRTKVQGKVGDNVLYLAHRHGIEMEGACEASLACTTCHVYVQHDY 111
>sp|Q08C57|ADXL_DANRE Adrenodoxin-like protein, mitochondrial OS=Danio rerio GN=fdx1l
PE=2 SV=1
Length = 195
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 7 LRVGAFMVKELSRGG-----CTSISRTGCTRQHWRPFIELQSVP-RVFQGSIFQKYPHFS 60
+R G + L+R C + CT R ++ S P R + SI S
Sbjct: 7 VRAGVNFTQRLNRISPVCRVCPLLRLNRCTGAAVRRAVDGFSAPSRRLRTSIGVCQSEDS 66
Query: 61 TTAENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLA 120
+ E DA + Q+ ++NV ++D+ G ++ VG ++L AH++ I+LEGACE SLA
Sbjct: 67 SAPEEDA----HAQEHIVNVVYIDRSGRRIPVQARVGDNVLYLAHKHGIDLEGACEASLA 122
Query: 121 CSTCHVIVMVHYW 133
CSTCHV V ++
Sbjct: 123 CSTCHVYVSSGHY 135
>sp|Q9CPW2|ADXL_MOUSE Adrenodoxin-like protein, mitochondrial OS=Mus musculus GN=Fdx1l
PE=2 SV=1
Length = 174
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 45 PRVFQGSIFQKYPHFSTTAE----NDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSM 100
PR ++ + F TT E +A+ +D++NV FVD+ G+ ++ VG ++
Sbjct: 24 PRAGHAAVTSRT--FGTTGERRAGEEAADSPELPRDVVNVVFVDRSGKRIPVRGKVGDNV 81
Query: 101 LEAAHENDIELEGACEGSLACSTCHVIV 128
L A + ++LEGACE SLACSTCHV V
Sbjct: 82 LYLAQRHGVDLEGACEASLACSTCHVYV 109
>sp|Q5FWQ0|ADXL_XENLA Adrenodoxin-like protein, mitochondrial OS=Xenopus laevis GN=fdx1l
PE=2 SV=1
Length = 193
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 61 TTAENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLA 120
+ AEN + S ++ + V F+D+ G+ +K VG S+L AH +IELEGACE SLA
Sbjct: 64 SDAENQRAELS---EETVEVVFLDRSGQRIPVKGKVGESVLCLAHRYNIELEGACESSLA 120
Query: 121 CSTCHVIVMVHYW 133
CSTCHV V Y+
Sbjct: 121 CSTCHVYVNTEYF 133
>sp|Q05B51|ADXL_BOVIN Adrenodoxin-like protein, mitochondrial OS=Bos taurus GN=FDX1L PE=2
SV=1
Length = 186
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 60 STTAENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSL 119
S A + + G + D++NV FVD+ G+ + VG ++L A + ++LEGACE SL
Sbjct: 53 SRPAGEEEAGGPERPGDVVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGLDLEGACEASL 112
Query: 120 ACSTCHVIV 128
ACSTCHV V
Sbjct: 113 ACSTCHVYV 121
>sp|P00258|ADX_PIG Adrenodoxin, mitochondrial OS=Sus scrofa GN=FDX1 PE=1 SV=2
Length = 186
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 29 GCTRQHWRPFIELQSVPRVFQGSIFQKYPHFSTTAE--NDASHGSNKQKDMINVTFVDKD 86
G T W+P + ++ R GSI+ + A + ++ + +D I V F+++D
Sbjct: 14 GDTAVRWQPLVGPRAGNRGPGGSIWLGLGGRAAAARTLSLSARAWSSSEDKITVHFINRD 73
Query: 87 GEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMVHYWPYM 136
G+ + VG S+L+ EN+++++G ACEG+LACSTCH+I H + +
Sbjct: 74 GKTLTTQGKVGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFEDHIFEKL 125
>sp|P10109|ADX_HUMAN Adrenodoxin, mitochondrial OS=Homo sapiens GN=FDX1 PE=1 SV=1
Length = 184
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 75 KDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMVHY 132
+D I V F+++DGE K VG S+L+ EN+++++G ACEG+LACSTCH+I H
Sbjct: 64 EDKITVHFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHI 123
Query: 133 WPYM 136
+ +
Sbjct: 124 YEKL 127
>sp|P29330|ADX_SHEEP Adrenodoxin OS=Ovis aries GN=FDX1 PE=1 SV=2
Length = 128
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 75 KDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMVHY 132
+D + V F+++DGE K VG S+L+ EN+++++G ACEG+LACSTCH+I H
Sbjct: 4 EDKVTVNFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEQHI 63
Query: 133 WPYM 136
+ +
Sbjct: 64 YEKL 67
>sp|P00257|ADX_BOVIN Adrenodoxin, mitochondrial OS=Bos taurus GN=FDX1 PE=1 SV=2
Length = 186
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 29 GCTRQHWRPFIELQSVPRVFQGSI------FQKYPHFSTTAENDASHGSNKQKDMINVTF 82
G T WR L + PR G + +T + + + +D I V F
Sbjct: 14 GDTAGRWR----LLARPRAGAGGLRGSRGPGLGGGAVATRTLSVSGRAQSSSEDKITVHF 69
Query: 83 VDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMVHYWPYM 136
+++DGE K +G S+L+ +N+++++G ACEG+LACSTCH+I H + +
Sbjct: 70 INRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKL 125
>sp|Q12184|ADRX_YEAST Adrenodoxin homolog, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAH1 PE=1 SV=1
Length = 172
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 73 KQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMVHY 132
K + + +TF+ KDG +K +V G ++L+ A +++++EGAC GS ACSTCHVIV Y
Sbjct: 56 KPGEELKITFILKDGSQKTYEVCEGETILDIAQGHNLDMEGACGGSCACSTCHVIVDPDY 115
Query: 133 W 133
+
Sbjct: 116 Y 116
>sp|P24483|ADX_RAT Adrenodoxin, mitochondrial OS=Rattus norvegicus GN=Fdx1 PE=2 SV=1
Length = 188
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 75 KDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMVHY 132
+D + V F ++DGE K VG S+L+ EN+++++G ACEG+LACSTCH+I H
Sbjct: 68 EDKVTVHFKNRDGETLTTKGKVGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFEDHI 127
Query: 133 W 133
+
Sbjct: 128 Y 128
>sp|P46656|ADX_MOUSE Adrenodoxin, mitochondrial OS=Mus musculus GN=Fdx1 PE=2 SV=1
Length = 188
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 75 KDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMVHY 132
+D I V F ++DGE K +G S+L+ EN+++++G ACEG+LACSTCH+I H
Sbjct: 68 EDKITVHFKNRDGETLTTKGKIGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFEDHI 127
Query: 133 W 133
+
Sbjct: 128 Y 128
>sp|P13216|ADX_CHICK Adrenodoxin, mitochondrial (Fragment) OS=Gallus gallus GN=FDX1 PE=1
SV=1
Length = 143
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 67 ASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTC 124
++ + +D I V F+++DG++ K G S+L+ EN+++++G ACEG+LACSTC
Sbjct: 15 SARAACSSEDKITVHFINRDGDKLTAKGKPGDSLLDVVVENNLDIDGFGACEGTLACSTC 74
Query: 125 HVIVMVHYWPYM 136
H+I H + +
Sbjct: 75 HLIFEDHIFEKL 86
>sp|Q8SV19|ADRX_ENCCU Adrenodoxin homolog OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ECU07_0600 PE=3 SV=1
Length = 128
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 93 KVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
K G ++L+ AH+N ++LEGACEG+LACSTCHVI+
Sbjct: 28 KAVCGSTVLDVAHKNGVDLEGACEGNLACSTCHVIL 63
>sp|P37098|FER2_CAUCR 2Fe-2S ferredoxin OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=fdxB PE=3 SV=1
Length = 106
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 77 MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIV 128
M +T++ DG E+ I V G++++E A +N++ ++ C G+ AC+TCHV V
Sbjct: 1 MAKITYIQHDGAEQVIDVKPGLTVMEGAVKNNVPGIDADCGGACACATCHVYV 53
>sp|P00259|PUTX_PSEPU Putidaredoxin OS=Pseudomonas putida GN=camB PE=1 SV=3
Length = 107
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 77 MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDI-ELEGACEGSLACSTCHVIV 128
M V +V DG + + V G+S+++AA N I ++ G C GS +C+TCHV V
Sbjct: 1 MSKVVYVSHDGTRRELDVADGVSLMQAAVSNGIYDIVGDCGGSASCATCHVYV 53
>sp|P44428|FER_HAEIN 2Fe-2S ferredoxin OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=fdx PE=3 SV=2
Length = 113
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 92 IKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
+ G ++LE AH +E+ AC+GS AC+TCHVIV
Sbjct: 19 VDAATGDNLLEVAHNAGVEIHHACDGSCACTTCHVIV 55
>sp|Q51383|FER_PSEAE 2Fe-2S ferredoxin OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=fdx PE=3 SV=2
Length = 112
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
G ++L+AA N IE+E ACE S AC+TCHVIV
Sbjct: 24 GETILDAALRNGIEIEHACEKSCACTTCHVIV 55
>sp|P0A9R6|FER_SHIFL 2Fe-2S ferredoxin OS=Shigella flexneri GN=fdx PE=3 SV=2
Length = 111
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
G ++L+AA N IE+E ACE S AC+TCH IV
Sbjct: 24 GETILDAALRNGIEIEHACEKSCACTTCHCIV 55
>sp|P0A9R4|FER_ECOLI 2Fe-2S ferredoxin OS=Escherichia coli (strain K12) GN=fdx PE=1 SV=2
Length = 111
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
G ++L+AA N IE+E ACE S AC+TCH IV
Sbjct: 24 GETILDAALRNGIEIEHACEKSCACTTCHCIV 55
>sp|P0A9R5|FER_ECO57 2Fe-2S ferredoxin OS=Escherichia coli O157:H7 GN=fdx PE=3 SV=2
Length = 111
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
G ++L+AA N IE+E ACE S AC+TCH IV
Sbjct: 24 GETILDAALRNGIEIEHACEKSCACTTCHCIV 55
>sp|O51882|FER_BUCAP 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg) GN=fdx PE=3 SV=1
Length = 111
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
G ++L A +N+I+LE ACE S ACSTCH I+
Sbjct: 24 GETILNVALKNNIKLEHACEKSCACSTCHCII 55
>sp|Q10361|ETP1_SCHPO Electron transfer protein 1, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=etp1 PE=1 SV=2
Length = 616
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/17 (94%), Positives = 17/17 (100%)
Query: 112 EGACEGSLACSTCHVIV 128
EGACEGS+ACSTCHVIV
Sbjct: 538 EGACEGSVACSTCHVIV 554
>sp|P57661|FER_BUCAI 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=fdx PE=3 SV=1
Length = 111
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
G ++L A N+I+LE ACE S ACSTCH I+
Sbjct: 24 GETILTVALRNNIKLEHACEQSCACSTCHCII 55
>sp|P80306|FER6_RHOCA Ferredoxin-6 OS=Rhodobacter capsulatus PE=1 SV=1
Length = 106
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 79 NVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIV 128
+ F++ +G ++ G++++EAA +N + ++ C G+ ACSTCH V
Sbjct: 2 KIIFIEHNGTRHEVEAKPGLTVMEAARDNGVPGIDADCGGACACSTCHAYV 52
>sp|D5IGG4|CARAC_SPHSX Ferredoxin CarAc OS=Sphingomonas sp. GN=carAc PE=1 SV=1
Length = 109
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIV 128
+ V F G E ++ G+S++EAA N ++ +E C G+ AC+TCHV V
Sbjct: 5 VRVIFRAAGGFEHLVETEAGVSLMEAAVLNGVDGIEAVCGGACACATCHVYV 56
>sp|P43493|THCC_RHOER Rhodocoxin OS=Rhodococcus erythropolis GN=thcC PE=1 SV=2
Length = 107
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 77 MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIV 128
M VT+V DG + ++VP G +++AA I+ + C G C+TCHV V
Sbjct: 1 MPTVTYVHPDGTKHEVEVPTGKRVMQAAIGAGIDGIVAECGGQAMCATCHVYV 53
>sp|Q89A15|FER_BUCBP 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=fdx PE=3 SV=1
Length = 107
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIV 128
G S+L A N++E+E ACE S C+TCH +
Sbjct: 24 GESILNVALRNNVEIEHACEKSCVCTTCHCYI 55
>sp|Q605A0|NQRF_METCA Na(+)-translocating NADH-quinone reductase subunit F
OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=nqrF PE=3 SV=1
Length = 407
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 89 EKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVM 129
E+ I VP+G +L A +N++ + AC G C+ C V V+
Sbjct: 42 ERTIHVPIGSKLLTALADNNLFVSSACGGGGTCAQCRVQVL 82
>sp|P33007|TERPB_PSESP Terpredoxin OS=Pseudomonas sp. GN=terPB PE=1 SV=2
Length = 106
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 77 MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHV 126
M V F+D+ E + G S++E A +N + + C GS C+TC +
Sbjct: 1 MPRVVFIDEQSGEYAVDAQDGQSLMEVATQNGVPGIVAECGGSCVCATCRI 51
>sp|A6V3A2|NQRF_PSEA7 Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain PA7) GN=nqrF PE=3 SV=1
Length = 407
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 89 EKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVM 129
E ++ VP G +L+ N++ L AC G C+ C +V+
Sbjct: 44 EHSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVV 84
>sp|Q9HZL1|NQRF_PSEAE Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=nqrF PE=3 SV=1
Length = 407
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 89 EKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVM 129
E ++ VP G +L+ N++ L AC G C+ C +V+
Sbjct: 44 EHSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVV 84
>sp|Q02PF8|NQRF_PSEAB Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=nqrF PE=3 SV=1
Length = 407
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 89 EKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVM 129
E ++ VP G +L+ N++ L AC G C+ C +V+
Sbjct: 44 EHSLTVPAGGKLLQTLATNNVFLSSACGGGGTCAQCKCVVV 84
>sp|P13106|FER_BUMFI Ferredoxin OS=Bumilleriopsis filiformis PE=1 SV=1
Length = 98
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 79 NVTFVDKDGEEKNI----KVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVM 129
+VT V+ EEKNI K P +L+AA E IEL +C ACSTC V+
Sbjct: 4 SVTLVN---EEKNINAVIKCPDDQFILDAAEEQGIELPYSCRAG-ACSTCAGKVL 54
>sp|P94044|FER6_MAIZE Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1
Length = 155
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 79 NVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTC 124
V V DG E + P +LEAA +EL +C +CSTC
Sbjct: 62 KVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAG-SCSTC 106
>sp|P27788|FER3_MAIZE Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1
Length = 152
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 55 KYPHFSTTAENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGA 114
K P T+ + D S + + V V +GEE P +L+AA +EL +
Sbjct: 40 KVPSLKTSKKLDVSAMA-----VYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYS 94
Query: 115 CEGSLACSTC 124
C ACSTC
Sbjct: 95 CRAG-ACSTC 103
>sp|Q96RN5|MED15_HUMAN Mediator of RNA polymerase II transcription subunit 15 OS=Homo
sapiens GN=MED15 PE=1 SV=2
Length = 788
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 30 CTRQHWRPFIELQSVPRVFQGSIFQKYPHFSTTAENDASHGSNKQKDMINVTFVDKD 86
CTR+ E QS+P V QG + + P F D SH SN + DKD
Sbjct: 660 CTRKRRLEDDERQSIPSVLQGEVARLDPKFLVNL--DPSHCSNNGTVHLICKLDDKD 714
>sp|O10687|GLYC_BRSVW Major surface glycoprotein G OS=Bovine respiratory syncytial virus
(strain Wbh) GN=G PE=2 SV=1
Length = 263
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 9/99 (9%)
Query: 34 HWRPFI---ELQSVPRVFQGSIFQKYPHFSTTAENDASHGSNKQKDMINVTFVDKDGEEK 90
H PF +S QG+ + P+ TT E SH N+ +D + K
Sbjct: 86 HTSPFFTEHNYKSTHTSIQGTTLPQLPNTDTTRETTYSHSINETQDRKTKSQSTLPATRK 145
Query: 91 NIKVPVGMSMLE--AAHENDIELE----GACEGSLACST 123
P G + E H N L CEG+ ACS+
Sbjct: 146 PPINPSGSNPPENHQDHNNSQTLPHVPCSTCEGNPACSS 184
>sp|Q54GQ6|ACOX1_DICDI Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyostelium discoideum
GN=acox1 PE=3 SV=1
Length = 700
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 51 SIFQKYPHFSTTAENDASHGSNKQKDMINVTFVDKDGE 88
S F+ Y +F + ++ + HGSN Q TF+ + GE
Sbjct: 133 SKFENYQYFGSYSQTEIGHGSNVQGIETTCTFIKETGE 170
>sp|Q05182|PHT2_PSEPU Phthalate 4,5-dioxygenase oxygenase reductase subunit
OS=Pseudomonas putida GN=pht2 PE=2 SV=1
Length = 324
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 45 PRVFQGSIFQKYPHFSTTAENDASHGSNKQKDMINVTFVDKDGEEK-NIKVPVGMSMLEA 103
PR S+ H+ + + S G ++ + N F G ++++PV S+LE
Sbjct: 204 PRPLMDSVLDMTGHWPPGSIHFESFGVDQSRFAENRPFSVTLGRSGIDLEIPVDRSILEV 263
Query: 104 AHENDIELEGACEGSLACSTC 124
+N I +CE S C +C
Sbjct: 264 LRDNGIRAPSSCE-SGTCGSC 283
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,588,508
Number of Sequences: 539616
Number of extensions: 2030727
Number of successful extensions: 4294
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4219
Number of HSP's gapped (non-prelim): 75
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)