BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031884
(151 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
Query: 53 RGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMD 112
R F +ACLP SP+ S PKTRL+VSGLSFRT+E+SLRNAF+ FGQLVEVNLVMD
Sbjct: 56 RNGNDLFAVACLPSSPNQPSI--PKTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMD 113
Query: 113 KIANRPRGFAFLRYATEEESRRAIEGMHGK 142
KIANRPRGFAFLRY+TEEES +AIEGMHGK
Sbjct: 114 KIANRPRGFAFLRYSTEEESEKAIEGMHGK 143
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 77/96 (80%), Gaps = 6/96 (6%)
Query: 53 RGRGACFPLACLPPSPHSL------STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVE 106
R + +C LACLPP + S P+T+L+VSGLSFRT+E+SLRNAF+ FGQLVE
Sbjct: 57 RNKASCSVLACLPPESSTSSSTAKPSFPSPQTKLYVSGLSFRTTEESLRNAFKNFGQLVE 116
Query: 107 VNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
V LVMD+IANRPRGFAFLRYATEEES++AIEGMHGK
Sbjct: 117 VKLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGK 152
>gi|449507141|ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 65/67 (97%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P TRL++SGLSFRT+E+SLRNAF+ FGQLVEVNLVMD++ANRPRGFAFLRYA+EEES++A
Sbjct: 87 PSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKA 146
Query: 136 IEGMHGK 142
IEGMHGK
Sbjct: 147 IEGMHGK 153
>gi|449439247|ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
[Cucumis sativus]
Length = 170
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 66/71 (92%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P TRL++SGLSFRT+E+SLRNAF+ FGQLVEVNLVMD++ANRPRGFAFLRYA+EEES++A
Sbjct: 87 PSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKA 146
Query: 136 IEGMHGKVCCC 146
IEGMHGK C
Sbjct: 147 IEGMHGKGDFC 157
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 79/98 (80%), Gaps = 8/98 (8%)
Query: 53 RGRGACFPLACLPPSPHSLSTCQPK--------TRLFVSGLSFRTSEDSLRNAFQGFGQL 104
R +G+C+ LACLPPS S S+ TRL+VSGLSFRT+E+SLRN F+ FGQL
Sbjct: 61 RIQGSCYLLACLPPSSESSSSSPSAKPSSSAPSTRLYVSGLSFRTTEESLRNCFKNFGQL 120
Query: 105 VEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
V+VNLVMDK+ANRPRGFAFLRYATEEES++AIEGMHGK
Sbjct: 121 VDVNLVMDKLANRPRGFAFLRYATEEESQKAIEGMHGK 158
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/66 (81%), Positives = 63/66 (95%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
KT+L+VSGLSFRT+E+SLRNAFQ FGQLV+VNLVMDK+A RPRGFAFLRY TEEE+++AI
Sbjct: 89 KTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAI 148
Query: 137 EGMHGK 142
EGMHGK
Sbjct: 149 EGMHGK 154
>gi|255573326|ref|XP_002527590.1| conserved hypothetical protein [Ricinus communis]
gi|223533029|gb|EEF34792.1| conserved hypothetical protein [Ricinus communis]
Length = 66
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/60 (88%), Positives = 59/60 (98%)
Query: 85 LSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKVC 144
+SFRT+E+SLRNAFQ FG+LVEVNLVMDKIANRPRGFAFLRYATEEES++AIEGMHGKVC
Sbjct: 7 ISFRTTEESLRNAFQNFGKLVEVNLVMDKIANRPRGFAFLRYATEEESQKAIEGMHGKVC 66
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 61/67 (91%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
PKT+L+VSGLSFRT+ED+LR+ F+ FG L+ +N+VMDK+ANRP+GFAFLRY TEEE+ +A
Sbjct: 75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKA 134
Query: 136 IEGMHGK 142
I+GMHGK
Sbjct: 135 IQGMHGK 141
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 61/66 (92%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
KT+L+VSGLSFRT+ED+LR+ F+ FG+L+ +NLVMDK+ANRPRGFAFLRY TEEE+ +AI
Sbjct: 76 KTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAI 135
Query: 137 EGMHGK 142
+GMHGK
Sbjct: 136 QGMHGK 141
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL+VSGLSFRT+E+SLRNAF+ FGQL EVNLVM+++A RPRGFAFL YA+EEES+ A+E
Sbjct: 67 SRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAME 126
Query: 138 GMHGK 142
GM GK
Sbjct: 127 GMQGK 131
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL+VSGLSFRT+E+SLRNAF+ FGQL EVNLVM+++A RPRGFAFL YA+EEES+ A+E
Sbjct: 70 SRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAME 129
Query: 138 GMHGK 142
GM GK
Sbjct: 130 GMQGK 134
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
ACLPP S TRL+VSGLSFRT+E SLR+AF+ FG L EV LVMD++A RPRGF
Sbjct: 52 ACLPPPSTSHGAA---TRLYVSGLSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGF 108
Query: 122 AFLRYATEEESRRAIEGMHGK 142
AFL Y EEE+R A+EGMHGK
Sbjct: 109 AFLSYTGEEEARGAMEGMHGK 129
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 6/78 (7%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
PPS H+ LF+ GLSFRT+E+SLR+AF+ FGQL EVNLVMD++A RPRGFAFL
Sbjct: 109 PPSLHAHVA------LFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFL 162
Query: 125 RYATEEESRRAIEGMHGK 142
YA EEES+ A+EGMHGK
Sbjct: 163 SYANEEESKNAMEGMHGK 180
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Query: 67 SPHSLSTCQPKT----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
S S+ QP +LFV+GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 301 SLDSMEANQPTNIKXKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYA 360
Query: 123 FLRYATEEESRRAIEGMHGKVCCCFWM 149
F+ Y+TEE + A++ M+GK+ WM
Sbjct: 361 FIEYSTEEAASAALKEMNGKIING-WM 386
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 64 LPPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
LP S + T KT+ LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 291 LPDSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYA 350
Query: 123 FLRYATEEESRRAIEGMHGKVCCCFWM 149
F+ Y TEE + A++ M+GK+ WM
Sbjct: 351 FVEYTTEEAASAALKEMNGKIING-WM 376
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 64 LPPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
LP S + T KT+ LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 291 LPDSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYA 350
Query: 123 FLRYATEEESRRAIEGMHGKVCCCFWM 149
F+ Y TEE + A++ M+GK+ WM
Sbjct: 351 FVEYTTEEAASAALKEMNGKIING-WM 376
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
Query: 67 SPHSLSTCQPKT----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
S S+ QP +LFV+GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 302 SLDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYA 361
Query: 123 FLRYATEEESRRAIEGMHGKVCCCFWM 149
F+ Y TEE + A++ M+GK+ WM
Sbjct: 362 FIEYTTEEAASAALKEMNGKIING-WM 387
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
Query: 67 SPHSLSTCQPKT----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
S S+ QP +LFV+GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 208 SLDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYA 267
Query: 123 FLRYATEEESRRAIEGMHGKVCCCFWM 149
F+ Y TEE + A++ M+GK+ WM
Sbjct: 268 FIEYTTEEAASAALKEMNGKIING-WM 293
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 44 DSLFSLRQGRGRGACFPLACLPPSPHSLS--TCQPKTRLFVSGLSFRTSEDSLRNAFQGF 101
D F RG + PP S T +LF++GLSF TSE +LR AF+GF
Sbjct: 183 DKDFESENKDYRGDSLINSANPPDSSEASQITHVRTKKLFITGLSFYTSEKTLRAAFEGF 242
Query: 102 GQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKVCCCFWM 149
G+LVEV ++MDKI+ R +G+AF++Y TEE + A++ M+GK+ WM
Sbjct: 243 GELVEVKIIMDKISKRSKGYAFVKYTTEEAASSALKEMNGKIING-WM 289
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 64 LPPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
+P S + KT+ LFV+GLSF TSE +LR AF+GFG+LVEV +++DKI+ R +G+A
Sbjct: 177 MPNSSEASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYA 236
Query: 123 FLRYATEEESRRAIEGMHGKVCCCFWM 149
F+ Y TEE + A++ M+GK+ WM
Sbjct: 237 FIEYTTEEAASAALKEMNGKIING-WM 262
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AFL Y TEE + A++
Sbjct: 285 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASAALKE 344
Query: 139 MHGKVCCCFWM 149
M+GK+ WM
Sbjct: 345 MNGKIING-WM 354
>gi|9293999|dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]
Length = 396
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 54/69 (78%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AFL Y TEE + A++
Sbjct: 283 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKE 342
Query: 139 MHGKVCCCF 147
M+GKV F
Sbjct: 343 MNGKVNLDF 351
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis thaliana]
gi|21536799|gb|AAM61131.1| unknown [Arabidopsis thaliana]
gi|25084257|gb|AAN72206.1| unknown protein [Arabidopsis thaliana]
gi|332642921|gb|AEE76442.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 374
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AFL Y TEE + A++
Sbjct: 283 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKE 342
Query: 139 MHGKVCCCFWM 149
M+GK+ WM
Sbjct: 343 MNGKIING-WM 352
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 53/65 (81%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV+GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AF+ Y TEE + A++
Sbjct: 298 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAALKE 357
Query: 139 MHGKV 143
M+GK+
Sbjct: 358 MNGKI 362
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MDKI+ R +G+AF+ Y TEE A++
Sbjct: 296 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKA 355
Query: 139 MHGKVCCCFWM 149
M+G++ WM
Sbjct: 356 MNGQIING-WM 365
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MDKI+ R +G+AF+ Y TEE A++
Sbjct: 266 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKA 325
Query: 139 MHGKVCCCFWM 149
M+G++ WM
Sbjct: 326 MNGQIING-WM 335
>gi|224097630|ref|XP_002311019.1| predicted protein [Populus trichocarpa]
gi|222850839|gb|EEE88386.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 51 QGRGRGACFPLACLPPSPHSLSTCQPKTRLFVS-GLSFRTSEDSLRNAFQGFGQLVEVNL 109
+ + G + S S +T +LF++ GLSF TSE +LR AF+GFG+LVEV +
Sbjct: 238 ENKDYGGDHIINSADSSEASQTTPVKTKKLFITAGLSFYTSEKTLRAAFEGFGELVEVKI 297
Query: 110 VMDKIANRPRGFAFLRYATEEESRRAIEGMHGKV 143
+MDKI+ R +G+AF+ Y TEE + A++ M+GKV
Sbjct: 298 IMDKISKRSKGYAFVEYTTEEAASAALKEMNGKV 331
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MD+I+ R +G+AF+ Y TEE A++
Sbjct: 302 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKA 361
Query: 139 MHGKVCCCFWM 149
M+G++ WM
Sbjct: 362 MNGQIING-WM 371
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MD+I+ R +G+AF+ Y TEE A++
Sbjct: 300 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKA 359
Query: 139 MHGKVCCCFWM 149
M+G++ WM
Sbjct: 360 MNGQIING-WM 369
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MDKI+ R +G+AF+ Y TE+ A++
Sbjct: 289 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEDAGGAALKA 348
Query: 139 MHGKVCCCFWM 149
M+G++ WM
Sbjct: 349 MNGEIING-WM 358
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 65 PPSPHSLST-CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
P +P ST +RLFV G+SF ++ +SL AF FG++VEVN++ DK +RP+G+A+
Sbjct: 20 PNTPLFFSTNSASSSRLFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAY 79
Query: 124 LRYATEEESRRAIEGMHGKVC 144
+ +ATE E+++A+ M+GKV
Sbjct: 80 VTFATENEAKKALTEMNGKVI 100
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 60 PLACLPPSPHSLSTCQP-KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
P + SP L + T+LF+SGLS +T+++ LR F FGQLVE +V D+I+ R
Sbjct: 25 PFCAVRSSPIGLGAVRDFTTKLFISGLSRQTTDEGLRAKFSEFGQLVEARVVTDRISGRS 84
Query: 119 RGFAFLRYATEEESRRAIEGMHGK 142
RGF F+RYAT E++ + EGM GK
Sbjct: 85 RGFGFVRYATLEDAAKGKEGMDGK 108
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
gi|223535726|gb|EEF37389.1| RNA binding protein, putative [Ricinus communis]
Length = 371
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 84 GLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKV 143
GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AF+ Y TEE + A++ M+GK+
Sbjct: 285 GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAANAALKEMNGKI 344
Query: 144 CCCFWM 149
WM
Sbjct: 345 ING-WM 349
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 59/85 (69%), Gaps = 5/85 (5%)
Query: 59 FPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
P+ACLPP + + +LFV+GLS T+E +L+NAF +G++V+V ++M+K R
Sbjct: 74 LPVACLPPPTRTRNN-----KLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRS 128
Query: 119 RGFAFLRYATEEESRRAIEGMHGKV 143
+GF F+ ++TEEE+ A++ M+GK+
Sbjct: 129 KGFGFVEFSTEEEANTALKEMNGKI 153
>gi|218184292|gb|EEC66719.1| hypothetical protein OsI_33054 [Oryza sativa Indica Group]
Length = 117
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 134 RAIEGMHGKVCC 145
AI GM GKVCC
Sbjct: 87 AAITGMDGKVCC 98
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 64 LPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
LPPS +P T LFVSGLS RT+ + L AF FG++ +V D++ +GF F
Sbjct: 65 LPPSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGF 124
Query: 124 LRYATEEESRRAIEGMHGK 142
++YAT E++ + IEGM GK
Sbjct: 125 VKYATLEDAAKGIEGMDGK 143
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
P + +P T LFVSGLS RT+ + L+ AF FG++V+ +V D+++ +GF F+RY
Sbjct: 42 PSAREQAEPNTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYG 101
Query: 128 TEEESRRAIEGMHGK 142
+ E++ + IEGM GK
Sbjct: 102 SLEDAEKGIEGMDGK 116
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%)
Query: 70 SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
S P +LFVSGLS RT+++ LR AF FG+++E +V DK+ +GFAF+RYAT+
Sbjct: 39 STEPADPSPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQ 98
Query: 130 EESRRAIEGMHGK 142
EE+ + EGM GK
Sbjct: 99 EEADKGKEGMDGK 111
>gi|116782406|gb|ABK22494.1| unknown [Picea sitchensis]
Length = 178
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 50/63 (79%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L+VSGLS+ T+E SLRNAF FG LVE +VMD++ R RGFAFLRYA EEE+ AI+GM
Sbjct: 84 LYVSGLSYYTTEQSLRNAFSSFGNLVEATIVMDRVTKRSRGFAFLRYAYEEEAEAAIKGM 143
Query: 140 HGK 142
HGK
Sbjct: 144 HGK 146
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ ++LR AFQ FG++V +V D+++ +GF F++YAT E++
Sbjct: 47 AEPSTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAA 106
Query: 134 RAIEGMHGK 142
+ IEGM GK
Sbjct: 107 KGIEGMDGK 115
>gi|215697937|dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 111
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P LF+SGLS RT+ D L+ AF FG+++ +V D++ +GF F+RYAT E++ +
Sbjct: 33 DPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAK 92
Query: 135 AIEGMHGKVC 144
IEGM GKVC
Sbjct: 93 GIEGMDGKVC 102
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLSF T+E +L AF FG++VEV +VMD+++ R +GF F++YA+E ++ RA
Sbjct: 32 TKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAKA 91
Query: 138 GMHGKVCC 145
M+GKV
Sbjct: 92 EMNGKVLS 99
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ R ++ PS + C ++LFV G+SF+T ++SL+ AF +G +VE
Sbjct: 11 LRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++MD+ R RGF F+ Y + EE+ AI+ + G+
Sbjct: 71 IIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQ 104
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Query: 60 PLACLPPSPHS------LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
P A P P S L T +P +FV+GL+ RT+ ++LR AF+ FG++ +V +V D+
Sbjct: 20 PTASSPTVPLSSGVTSALKTAEPNEIVFVTGLNKRTTSETLREAFKKFGEVKQVRVVADR 79
Query: 114 IANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ +GF ++RYAT E++ + I+GM GK
Sbjct: 80 VSGYSKGFGYVRYATSEDAAKGIQGMDGK 108
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 62 ACLPPSPHSLSTCQ--PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
A L +P +L Q T+LFV GLS T+E+ L AF +GQ+VE +VMD+ +R +
Sbjct: 21 AKLVAAPTALFIWQRGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSK 80
Query: 120 GFAFLRYATEEESRRAIEGMHGKVC 144
GF F+ YA+E+E+++A++ M+GK
Sbjct: 81 GFGFVTYASEDEAQKALDEMNGKAL 105
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ R ++ PS + C +++F+ G+SF+T ++ L+ AF +G +VE
Sbjct: 11 LRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++MD+ R RGF F+ Y + EE+ AI+ M G+
Sbjct: 71 IIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQ 104
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLF+ GLS +EDSL AF +GQ++E +V DK+ NRP+GF F+++A+EE + +A E
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 139 MHGKV 143
M+GKV
Sbjct: 98 MNGKV 102
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ + LR AF FG++ + +V D+++ +GF F+RYAT E+S
Sbjct: 52 AEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSA 111
Query: 134 RAIEGMHGK 142
+ I GM GK
Sbjct: 112 KGIAGMDGK 120
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ + LR AF FG++ + +V D+++ +GF F+RYAT E+S
Sbjct: 52 AEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSA 111
Query: 134 RAIEGMHGK 142
+ I GM GK
Sbjct: 112 KGIAGMDGK 120
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P LFVSGLS RT+ + LR+AF FG++V +V D+++ +GF F+RYAT EE+ +
Sbjct: 32 DPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATK 91
Query: 135 AIEGMHGK 142
IEGM GK
Sbjct: 92 GIEGMDGK 99
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 57 ACFP-LACLPPSPH---SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMD 112
+ FP ++ LPP + T +P T LFVSGLS RT+ + LR F FG++V +V D
Sbjct: 24 SSFPFVSTLPPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTD 83
Query: 113 KIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++ +GF F++YAT E++ + IEGM GK
Sbjct: 84 RVSGYSKGFGFVQYATIEDAAKGIEGMDGK 113
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ D LR AF FGQ++E ++ D+I+ RGF F++YAT EE+ I+GM
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 140 HGK 142
GK
Sbjct: 97 DGK 99
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ D LR AF FGQ++E ++ D+I+ RGF F++YAT EE+ I+GM
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 140 HGK 142
GK
Sbjct: 97 DGK 99
>gi|125548231|gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
Length = 113
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLF+ GLS +EDSL AF +GQ++E +V DK+ NRP+GF F+++A+EE + +A E
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 139 MHGKVC----CCFWMA 150
M+GK C F A
Sbjct: 98 MNGKASFLKQCIFSSA 113
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E++L AF +GQ++E +V D++++R +GF F+ +A+++E+ AIE
Sbjct: 30 KLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIED 89
Query: 139 MHGK 142
M GK
Sbjct: 90 MKGK 93
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ R ++ PS + C +++F+ G+SF+T ++ L+ AF +G +VE
Sbjct: 11 LRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEGI 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++MD+ R RGF F+ Y + EE+ AI+ M G+
Sbjct: 71 IIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQ 104
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
P + +P T LFVSGL+ RT+ + LR F FG++V +V D+++ +GF F++YA
Sbjct: 34 PTTRQMGEPSTNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYA 93
Query: 128 TEEESRRAIEGMHGK 142
T EE+ + I+GM GK
Sbjct: 94 TIEEASKGIQGMDGK 108
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ + L+ AF FGQ++E ++ D+I+ RGF F++YAT +E+ AIEGM
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEGM 95
Query: 140 HGK 142
GK
Sbjct: 96 DGK 98
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
LS+ +LFVSGLS T +++L+ AF FGQLVE ++ D+ + R +GFAF+ Y T E
Sbjct: 26 LSSTLTSPKLFVSGLSRLTKDENLKEAFSSFGQLVEAKVITDRASGRSKGFAFVTYTTIE 85
Query: 131 ESRRAIEGMHGK 142
E+ RA EGM+ K
Sbjct: 86 EAERAREGMNAK 97
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P LF+SGLS RT+ D L+ AF FG+++ +V D++ +GF F+RYAT E++
Sbjct: 32 ADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAA 91
Query: 134 RAIEGMHGK 142
+ IEGM GK
Sbjct: 92 KGIEGMDGK 100
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ D LR AF FGQ+ E ++ D+I+ RGF F++YAT EE+ I+GM
Sbjct: 42 LFVSGLNKRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 101
Query: 140 HGK 142
GK
Sbjct: 102 DGK 104
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
HS TC RLFVSGLS T+++ L+ AF FGQLV+ +++D+ + R +GF F+ YAT
Sbjct: 30 HSTLTCP---RLFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGFGFITYAT 86
Query: 129 EEESRRAIEGMHGK 142
EE+ +A EGM+ K
Sbjct: 87 IEEAEKAREGMNAK 100
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P LF+SGLS RT+ D L+ AF FG+++ +V D++ +GF F+RYAT E++
Sbjct: 32 ADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAA 91
Query: 134 RAIEGMHGK 142
+ IEGM GK
Sbjct: 92 KGIEGMDGK 100
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T E SLR+AF +G++++ +++D+ R RGF F+ YA EE++
Sbjct: 27 CMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQAS 86
Query: 134 RAIEGMHGK 142
AI + GK
Sbjct: 87 SAIMALDGK 95
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P LFVSGLS RT+ D LR AF FG+++ +V D++ +GF F+RYA+ E++
Sbjct: 44 ADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDAS 103
Query: 134 RAIEGMHGK 142
+ IEGM GK
Sbjct: 104 KGIEGMDGK 112
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T E SLR+ F +GQ++E ++ D+ R RGF F+ YA+ EE+
Sbjct: 27 CMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEAS 86
Query: 134 RAIEGMHGK 142
AI + GK
Sbjct: 87 AAITALDGK 95
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T E SLR+ F +GQ++E ++ D+ R RGF F+ YA+ EE+
Sbjct: 27 CMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEAS 86
Query: 134 RAIEGMHGK 142
AI + GK
Sbjct: 87 AAITALDGK 95
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ D LR AF FGQ+ + ++ D+I+ RGF F++YAT EE+ I+GM
Sbjct: 42 LFVSGLNKRTTSDGLREAFSKFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKGM 101
Query: 140 HGK 142
GK
Sbjct: 102 DGK 104
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG R P+A + C ++LF+ GLS+ + SL++AF GFG +V+
Sbjct: 11 LRQGAARSTHAPVASMLNYIR----CMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAK 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ + R RGF F+ ++ +E + A+ M GK
Sbjct: 67 VITDRDSGRSRGFGFVNFSNDESASSALSAMDGK 100
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T + SLR+ F +GQ++E +++D+ + R RGF F+ Y + EE+
Sbjct: 30 CMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEAS 89
Query: 134 RAIEGMHGKV 143
AI M GK
Sbjct: 90 AAITAMDGKT 99
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T + SLR+ F +GQ++E +++D+ + R RGF F+ Y + EE+
Sbjct: 27 CMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEAS 86
Query: 134 RAIEGMHGKV 143
AI M GK
Sbjct: 87 AAITAMDGKT 96
>gi|222612603|gb|EEE50735.1| hypothetical protein OsJ_31052 [Oryza sativa Japonica Group]
Length = 118
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 134 RAIEGMHGKV 143
AI GM GKV
Sbjct: 87 AAITGMDGKV 96
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 55 RGACFP---LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVM 111
+GA P A P+ ++LS ++LF+ GL++ T E LR+AF FG+++EV ++
Sbjct: 12 KGALKPNRLAAAALPATYTLSRG-FSSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQ 70
Query: 112 DKIANRPRGFAFLRYATEEESRRAIEGMHGKVC 144
D+ R RGF F+ Y T++E+++A+E M G+V
Sbjct: 71 DRETGRSRGFGFVSYITDQEAQKAMEAMDGRVL 103
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGK 142
+EGM+GK
Sbjct: 63 LEGMNGK 69
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 49 LRQGRGRGACFPLACLPP---SPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLV 105
LRQ R L P + S+S+ P T+LF+ G+S+ T E SLR AF +G++V
Sbjct: 11 LRQTASRQVSSELRSSPSFFQAIRSMSSA-PSTKLFIGGVSYSTDEQSLREAFSKYGEVV 69
Query: 106 EVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+ ++MD+ R RGF F+ Y + EE+ AI+ + G+
Sbjct: 70 DARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQ 106
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ V+ LS+ TS+ SL+ F FGQ+VEV++V DK A RPRG+AF++Y +++ + A+E
Sbjct: 38 SRIMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQYTSQDHAMLALE 97
Query: 138 GM-----HGKVCC 145
M G+V C
Sbjct: 98 NMDHKYLDGRVVC 110
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ + L+ AF FGQ++E ++ D+I+ RGF F++YAT +E+ AI+GM
Sbjct: 38 LFVSGLNKRTTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 97
Query: 140 HGK 142
GK
Sbjct: 98 DGK 100
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGK 142
+EGM+GK
Sbjct: 63 LEGMNGK 69
>gi|226509825|ref|NP_001150518.1| ELAV-like protein 4 [Zea mays]
gi|195639828|gb|ACG39382.1| ELAV-like protein 4 [Zea mays]
gi|414590519|tpg|DAA41090.1| TPA: ELAV-like protein 4 [Zea mays]
Length = 129
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ + L+ AF FGQ++E ++ D+I+ RGF F++YAT +E+ AI+GM
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 95
Query: 140 HGK 142
GK
Sbjct: 96 DGK 98
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGK 142
+EGM+G+
Sbjct: 63 MEGMNGQ 69
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG R P++ + C ++LF+ GLS+ + SL++AF GFG +V+
Sbjct: 11 LRQGAARSTQAPVSSMLNYIR----CMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAK 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ + R RGF F+ ++ +E + A+ M GK
Sbjct: 67 VITDRDSGRSRGFGFVNFSNDESASSALSAMDGK 100
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ P T+LFV G+S+ T E SL +AF +GQ+++ ++MD+ + R +GF F+ Y T EE+
Sbjct: 39 SSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEA 98
Query: 133 RRAIEGMHGK 142
AI+ + G+
Sbjct: 99 SSAIQALDGQ 108
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGK 142
+EGM+G+
Sbjct: 63 MEGMNGQ 69
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+SGLS T+++ L+NAF FGQL+E ++ D+I+ R +GF F+RYAT EE+ A +
Sbjct: 68 KLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQE 127
Query: 139 MHGK 142
M+ K
Sbjct: 128 MNAK 131
>gi|224125712|ref|XP_002329699.1| predicted protein [Populus trichocarpa]
gi|222870607|gb|EEF07738.1| predicted protein [Populus trichocarpa]
Length = 55
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 108 NLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKVCCCF 147
LVMDKIA RP+GFAF+RY TEEE+++AIEGMHGKVC +
Sbjct: 10 ELVMDKIAKRPKGFAFIRYETEEEAQKAIEGMHGKVCSTY 49
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 48/69 (69%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ + L+ AF FG++V+ +V D+++ +GF F++YAT E++
Sbjct: 51 AEPNTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAA 110
Query: 134 RAIEGMHGK 142
I+GM G+
Sbjct: 111 EGIKGMDGQ 119
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 67 SPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
SP ++ +LFVSGLS T+++ L+ AF FGQL+E ++ D+++ R +GF F+ Y
Sbjct: 23 SPARFNSTVTSPKLFVSGLSRLTTDEKLKEAFSPFGQLLEAKVITDRVSGRSKGFGFVTY 82
Query: 127 ATEEESRRAIEGMHGK 142
T EE+ +A EGM+ K
Sbjct: 83 TTLEEAEKAREGMNAK 98
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+SGLS T+++ L+NAF FGQL+E ++ D+I+ R +GF F+RYAT EE+ A +
Sbjct: 68 KLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQE 127
Query: 139 MHGK 142
M+ K
Sbjct: 128 MNAK 131
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++L+V +SF+TSED LR+AF FG + +V + MDK+ RPRGFAF+ +T EE++ A E
Sbjct: 4 SKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAE 63
Query: 138 GMHG 141
++G
Sbjct: 64 KLNG 67
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS +ED+L AF +GQ++E +V DK+ NR +GF F+++A+EEE+ +A +
Sbjct: 37 KLFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKARDE 96
Query: 139 MHGKVC 144
M+GKV
Sbjct: 97 MNGKVL 102
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ +LFV GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y E+++
Sbjct: 2 SDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKD 61
Query: 135 AIEGMHGK 142
A++GM+GK
Sbjct: 62 ALDGMNGK 69
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV G+SF T+E +L AF FG++VE ++MDK RP+GFA++ + E+E+ +A+ M
Sbjct: 36 LFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTEM 95
Query: 140 HGKVC 144
+GKV
Sbjct: 96 NGKVV 100
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P LFVSGLS RT+ + LR AF FG+++ +V D+++ +GF F+RYAT EE+ +
Sbjct: 32 DPSPNLFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAK 91
Query: 135 AIEGMHGK 142
IEG GK
Sbjct: 92 GIEGKDGK 99
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ P T+LF+ G+S+ T E SLR AF +G++V+ ++MD+ R RGF F+ Y + EE+
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 133 RRAIEGMHGK 142
AI+ + G+
Sbjct: 97 SSAIQALDGQ 106
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLSF T+E L F +GQ+VE +VMD++++R +GF F+ +A+EEE+++A
Sbjct: 34 SKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKART 93
Query: 138 GMHGK 142
M GK
Sbjct: 94 EMDGK 98
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGK 142
++GM+GK
Sbjct: 63 LDGMNGK 69
>gi|225461185|ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+P T LFVSGLS RT+ + L AF FGQ+V +V D+++ +GF F+RY + E++
Sbjct: 38 EPSTNLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAE 97
Query: 135 AIEGMHGK 142
I+GM GK
Sbjct: 98 GIKGMDGK 105
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ P T+LF+ G+S+ T E SLR AF +G++V+ ++MD+ R RGF F+ Y + EE+
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 133 RRAIEGMHGK 142
AI+ + G+
Sbjct: 97 SSAIQALDGQ 106
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRNAIEGMNGK 72
>gi|19881711|gb|AAM01112.1|AC098682_16 Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 119
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 134 RAIEGMHGKV 143
AI GM GK
Sbjct: 87 AAITGMDGKT 96
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRNAIEGMNGK 72
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRNAIEGMNGK 72
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRNAIEGMNGK 72
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRNAIEGMNGK 72
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ + L+ AF FG++V+ +V D+ + +GF F+RY T E++
Sbjct: 50 AEPNTNLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAA 109
Query: 134 RAIEGMHGK 142
I+GM G+
Sbjct: 110 EGIKGMDGQ 118
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRNAIEGMNGK 72
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ + + PS + C ++LF+ GLS+ T + SLR AF +G+++E
Sbjct: 11 LRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + + EE+ AI+ + G+
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQ 104
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
LS+ +LFVSGL T ++ L+ AF FGQLVE +++D+ + R +GFAF+ Y T E
Sbjct: 26 LSSTLTSPKLFVSGLCRLTIDEKLKEAFSSFGQLVEAKVIIDRASGRSKGFAFVTYTTIE 85
Query: 131 ESRRAIEGMHGK 142
E+ +A EGM+ K
Sbjct: 86 EAEKAREGMNAK 97
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 64 LPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
L P P + ++FV GLSF ++E + AF FG+++E +VMDK RP+G+ F
Sbjct: 20 LYPQPLLFFSKGFSAKVFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGF 79
Query: 124 LRYATEEESRRAIEGMHGKV 143
+ +A ++ + +A EGM+GK+
Sbjct: 80 VTFAKKDAAEKACEGMNGKL 99
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLSF T++ L AF +GQ+VE +V D++ +R +GF F+ +A+E+E+ A+
Sbjct: 31 TKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAHNALS 90
Query: 138 GMHGK 142
M+GK
Sbjct: 91 EMNGK 95
>gi|346469013|gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T LFVSGLS RT+ + LR AF FG++V +V D+++ +GF F++YAT E++ I+
Sbjct: 36 TNLFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIK 95
Query: 138 GMHGK 142
GM GK
Sbjct: 96 GMDGK 100
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ + + PS + C ++LF+ GLS+ T + SLR AF +G+++E
Sbjct: 11 LRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFYKYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + + EE+ AI+ + G+
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQ 104
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 134 RAIEGMHGK 142
AI GM GK
Sbjct: 87 AAITGMDGK 95
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ + + PS + C ++LF+ GLS+ T + SLR AF +G+++E
Sbjct: 11 LRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + + EE+ AI+ + G+
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQ 104
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P LFVSGLS RT+ D LR AF FG++ ++ D++ +GF F+RY T E++
Sbjct: 44 ADPSPNLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAA 103
Query: 134 RAIEGMHGK 142
+ IEGM G+
Sbjct: 104 KGIEGMDGE 112
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRSAIEGMNGK 72
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRSAIEGMNGK 72
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRSAIEGMNGK 72
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T ++SL +AF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRSAIEGMNGK 72
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 56 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 115
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 116 EDAMRSAIEGMNGK 129
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T D+L AF FG++VE ++ D+ R RGF F+ +ATE+
Sbjct: 1 MASAEVEFRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQ 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 AMRDAIEGMNGQ 72
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 67
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 68 EDAMRSAIEGMNGK 81
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 67
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 68 EDAMRSAIEGMNGK 81
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 1 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 60
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 61 EDAMRSAIEGMNGK 74
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 8 EKMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 67
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 68 EDAMRSAIEGMNGK 81
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
LS+ +LF+SGLS T+++ LR AF FGQLV+ +V D+ R +GFAF+ Y+T +
Sbjct: 33 LSSTLTSPKLFISGLSRLTTDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTID 92
Query: 131 ESRRAIEGMHGK 142
E+ +A E M+ K
Sbjct: 93 EAEKAREEMNAK 104
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 9 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 68
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 69 EDAMRSAIEGMNGK 82
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 9 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 68
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 69 EDAMRSAIEGMNGK 82
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
+ PP +S T+LFV GLS+ T++ L AF +GQ++E +VMD+++++ +GF
Sbjct: 19 SLFPPPSRLVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGF 78
Query: 122 AFLRYATEEESRRAIEGMHGK 142
F+ +A+ +E+ A+ M+GK
Sbjct: 79 GFVTFASLDEAHTALSEMNGK 99
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGLS RT+ + LR F FG++V +V D+++ +GF F++YAT EE+ + IEGM
Sbjct: 51 LFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGM 110
Query: 140 HGK 142
GK
Sbjct: 111 DGK 113
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 3 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 62
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 63 EDAMRSAIEGMNGK 76
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 61
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 62 EDAMRSAIEGMNGK 75
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 61
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 62 EDAMRSAIEGMNGK 75
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 47/64 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E +L +AF +GQ+VE ++ D+I+ + +G+ F+ +A+++E+ +AI
Sbjct: 33 KLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITE 92
Query: 139 MHGK 142
M+ K
Sbjct: 93 MNEK 96
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 4 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 63
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 64 EDAMRSAIEGMNGK 77
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
+ PP +S T+LFV GLS+ T++ L AF +GQ++E +VMD+++++ +GF
Sbjct: 19 SLFPPPSRLVSFRAIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGF 78
Query: 122 AFLRYATEEESRRAIEGMHGK 142
F+ +A+ +E+ A+ M+GK
Sbjct: 79 GFVTFASLDEAHTALSEMNGK 99
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 61 LACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + RPR
Sbjct: 20 VSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRPR 79
Query: 120 GFAFLRYATEEESRRAIEGMHGK 142
GF F+ ++ +E + AI+ M G+
Sbjct: 80 GFGFVNFSDDECANEAIKAMDGQ 102
>gi|357112848|ref|XP_003558218.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 168
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVSGLS T+++ L+NAF FGQ++E ++ D+I+ R +GF F+RY + +E+ A +G
Sbjct: 63 KLFVSGLSRLTTDEKLKNAFIPFGQVLEAKVITDRISGRSKGFGFVRYVSLQEAEAARQG 122
Query: 139 MHGK 142
M+ K
Sbjct: 123 MNAK 126
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV G+S+ T + SLR +F +G++++V ++MD+ R RGF F+ +AT E++ AI+G
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQG 100
Query: 139 MHGK 142
M G+
Sbjct: 101 MDGQ 104
>gi|22725943|gb|AAN04953.1| Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 147
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 83 SGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+ AI GM GK
Sbjct: 66 GGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGK 125
Query: 143 VCCC 146
VCC
Sbjct: 126 VCCA 129
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+ R AIEG
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62
Query: 139 MHGK 142
M+GK
Sbjct: 63 MNGK 66
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y ++++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDA 62
Query: 136 IEGMHGKV 143
+EGM+GK
Sbjct: 63 LEGMNGKT 70
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
+RQ + P+A + S C ++LF+ GL++ T + SL++AF GFG++ E
Sbjct: 11 VRQSVSQNGQVPMASMLNSIR----CMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEAR 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ R RGF F+ Y + E + A+ M G+
Sbjct: 67 VITDRDTGRSRGFGFVSYESTESASEALSAMDGQ 100
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV G+S+ T + SLR +F +G++++V ++MD+ R RGF F+ +AT E++ AI+G
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 139 MHGK 142
M G+
Sbjct: 101 MDGQ 104
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV G+S+ T + SLR +F +G++++V ++MD+ R RGF F+ +AT E++ AI+G
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 139 MHGK 142
M G+
Sbjct: 101 MDGQ 104
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGLS T+++ L+ AF FG+L+E +V D+++ R +GF F+RYAT EE+ RA + M
Sbjct: 62 LFVSGLSRLTTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAERARQEM 121
Query: 140 HGK 142
+ K
Sbjct: 122 NAK 124
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R
Sbjct: 19 AVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGK 142
RGF F+ ++ +E + AI+ M G+
Sbjct: 79 RGFGFVNFSDDESANEAIKAMDGQ 102
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 134
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 47/65 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ FG + E ++ D+ NR RGF F+R+AT+ E+ AI+
Sbjct: 2 SKLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAID 61
Query: 138 GMHGK 142
GM+ +
Sbjct: 62 GMNNQ 66
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R
Sbjct: 19 AVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGK 142
RGF F+ ++ +E + AI+ M G+
Sbjct: 79 RGFGFVNFSDDESANEAIKAMDGQ 102
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLSF T E +L++AF FG ++E +++D+ + R RGF F+ + + EE+
Sbjct: 28 CMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 134 RAIEGMHGK 142
A+ M GK
Sbjct: 88 AAMTSMDGK 96
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+EDSL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGKV 143
++ M+GK
Sbjct: 63 LDAMNGKT 70
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++FV GL+F T+E+ L AF +G +V+ ++V++K R +GF ++ +A EEE+R+A
Sbjct: 32 SKIFVKGLAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQI 91
Query: 138 GMHGKV 143
GM+GK+
Sbjct: 92 GMNGKI 97
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLSF T E +L++AF FG ++E +++D+ + R RGF F+ + + EE+
Sbjct: 28 CMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 134 RAIEGMHGK 142
A+ M GK
Sbjct: 88 AAMTSMDGK 96
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV GLS+ T E LR AF +G +++ +++D + R RGF F+ YA E++++
Sbjct: 27 CMSSSKIFVGGLSYNTDETGLREAFTHYGDIIDAKIIVDHESRRSRGFGFITYAAEDQAK 86
Query: 134 RAIEGMHGK 142
AI + GK
Sbjct: 87 AAIMALDGK 95
>gi|299473131|emb|CBN78707.1| Peptidyl-prolyl cis-trans isomerase E [Ectocarpus siliculosus]
Length = 135
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
QPK ++V GL + +E+ L AF FG +VEVNL D +AN RGF F+ + EE+++
Sbjct: 5 AQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFEVEEDAK 64
Query: 134 RAIEGMHG 141
AI+ M G
Sbjct: 65 AAIDNMDG 72
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV G+S++T + SLR+ F +GQ++E +++D+ + R RGF F+ Y + EE+ AI
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAIT 89
Query: 138 GMHGKV 143
+ GK
Sbjct: 90 ALDGKT 95
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana]
gi|330252880|gb|AEC07974.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 116
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 51/65 (78%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV G+SF ++E++L AF +GQ+++V+++MDKI RP+GFA++ ++++EE+ +A+ +
Sbjct: 23 LFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKALLEL 82
Query: 140 HGKVC 144
+ ++
Sbjct: 83 NAQLV 87
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R
Sbjct: 19 AVSATSPMPSMLDAIRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGK 142
RGF F+ ++ +E + AI+ M G+
Sbjct: 79 RGFGFVNFSDDESANEAIKAMDGQ 102
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++FV G+S+ T + SL +AF +GQ+ E ++MD+ + R RGF F+ + + EE+ AI
Sbjct: 31 SKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAGAAIT 90
Query: 138 GMHGK 142
GM GK
Sbjct: 91 GMDGK 95
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
PS + C ++LFV G+S++T + SLR+ F +GQ++E +++D+ + R RGF F+
Sbjct: 19 PSVYQAIRCMS-SKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVT 77
Query: 126 YATEEESRRAIEGMHGKV 143
Y + EE+ AI + GK
Sbjct: 78 YTSSEEASAAITALDGKT 95
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
PS + C ++LFV GLS+ T + SLR+ F +G+++E +++D+ + R RGF F+
Sbjct: 19 PSVYQAIRCMS-SKLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVT 77
Query: 126 YATEEESRRAIEGMHGKV 143
Y + EE+ AI M GK
Sbjct: 78 YTSSEEASAAITAMDGKT 95
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV G+S++T + SLR+ F +GQ++E +++D+ + R RGF F+ Y + EE+ AI
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAIT 89
Query: 138 GMHGKV 143
+ GK
Sbjct: 90 ALDGKT 95
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLSF T+E+SL AF FG + +V+++ D+ RGF F++Y E+++ A+EG
Sbjct: 3 KLFIGGLSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAMEG 62
Query: 139 MHGKV 143
M+GK
Sbjct: 63 MNGKT 67
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 49 LRQG-RGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEV 107
LRQG GR +P H+L +RLF+ GLS+ + SLR +F +G+++E
Sbjct: 11 LRQGISGRLGFNETRSVPSIYHAL-RYMSSSRLFIGGLSYGMDDQSLRESFTEYGEVIEA 69
Query: 108 NLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ R RGF F+ + + EE+ AI GM GK
Sbjct: 70 RIIHDRETGRSRGFGFISFTSNEEAAAAITGMDGK 104
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MARSDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGK 142
R IEGM+GK
Sbjct: 61 RMRNRIEGMNGK 72
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+EDSL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDA 62
Query: 136 IEGMHGKV 143
++ M+GK
Sbjct: 63 LDAMNGKT 70
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+SGLS T+++ L AF FGQL+E ++ D+ + R +GFAF+ Y+T EE+ +A EG
Sbjct: 36 KLFISGLSRLTTDEKLTEAFSPFGQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREG 95
Query: 139 MHGK 142
M+ K
Sbjct: 96 MNAK 99
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR+ F+ FG + E ++ D+ NR RGF F+R++T+ E+ AIEG
Sbjct: 3 KLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIEG 62
Query: 139 MH 140
M+
Sbjct: 63 MN 64
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGK 142
M+G+
Sbjct: 66 MNGQ 69
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVSGLS T+++ L+ AF FG+++E +V D+++ R +GF F+RYAT EE+ +A +
Sbjct: 64 KLFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYATIEEAEKARQE 123
Query: 139 MHGK 142
M+ K
Sbjct: 124 MNAK 127
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGK 142
E+ R AIEGM+GK
Sbjct: 68 EDAMRSAIEGMNGK 81
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
H+ + P ++LFV+GLS+ E SL++AF FG++ EV ++ DK + R RGF F+ ++
Sbjct: 16 HNSPSPPPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSK 75
Query: 129 EEESRRAIEGMHGKV 143
E E+ A + M GK
Sbjct: 76 ENEAVCAKDAMDGKA 90
>gi|225447115|ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|297739201|emb|CBI28852.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV+GLS+ E SL++AF FG + EV ++ DK + R RGF F+ ++ E ++R A +
Sbjct: 38 TKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKD 97
Query: 138 GMHGK 142
M GK
Sbjct: 98 AMDGK 102
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L + SED LR+AF FGQ+ N++MDK + R +GF F+ + ++ +R AIE M
Sbjct: 3 IYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAM 62
Query: 140 HGK 142
H K
Sbjct: 63 HNK 65
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGK 142
M+G+
Sbjct: 66 MNGQ 69
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGK 142
M+G+
Sbjct: 66 MNGQ 69
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGK 142
M+G+
Sbjct: 66 MNGQ 69
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGK 142
M+G+
Sbjct: 66 MNGQ 69
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ GLS+ T++DSL++AF GFG +V ++ D+ R RGF F+ +++ + +
Sbjct: 32 CMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSAS 91
Query: 134 RAIEGMHGK 142
A+ M G+
Sbjct: 92 SALSAMDGQ 100
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ + L+ PS +++FV G+S++T + SLR AF +G+++E
Sbjct: 11 LRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAFGKYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGFAF+ Y + EE+ AI+ + G+
Sbjct: 71 VIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQ 104
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T++DSL+ AF FG + E ++ D+ + R RGF F+ +A ++++ A++
Sbjct: 37 TKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMD 96
Query: 138 GMHGK 142
M GK
Sbjct: 97 AMDGK 101
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T + SLR+AF FG++V+ +++D+ RPRGF F+ ++ E + AI
Sbjct: 36 TKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAIS 95
Query: 138 GMHGK 142
M GK
Sbjct: 96 EMDGK 100
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV L++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 1 MAASDVEYRCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 61 AMRSAIEGMNGK 72
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
ST +LF+SGLS +T++ L AF FGQL+E ++ D+ + R +GF F+ YA+ EE
Sbjct: 25 STTLTTPKLFISGLSRQTTDRKLNEAFAPFGQLIEAKVITDRASGRSKGFGFVSYASIEE 84
Query: 132 SRRAIEGMHGK 142
+ +A +GM+ K
Sbjct: 85 AEKAGKGMNAK 95
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ A + +P ++ C T+LFV GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQSISGNAVSATSTMPSMLDAV-RCMS-TKLFVGGLSWGTDDQSLRDAFATFGDVVDAR 68
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ + R RGF F+ ++ +E + AI+ M G+
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQ 102
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ R FV GL++ T + +L++AF FG++++ ++ D+ R RGF F+ +ATEE + A
Sbjct: 2 DEYRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAA 61
Query: 136 IEGMHGK 142
IEGM+GK
Sbjct: 62 IEGMNGK 68
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R RGF F+ ++ +E + AI+
Sbjct: 38 TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIK 97
Query: 138 GMHGK 142
M G+
Sbjct: 98 AMDGQ 102
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 70 SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
S+++ + R FV GL++ T + +L AF +G++VE ++ D+ R RGF F+ +A+E
Sbjct: 36 SMASSDVEYRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASE 95
Query: 130 EESRRAIEGMHGK 142
+ + AIEGM+G+
Sbjct: 96 QSMKDAIEGMNGQ 108
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 52/81 (64%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
A P+ +S ++LFV GL++ T++D+++ AF FG++ EV ++ D+ R RGF
Sbjct: 26 AAAIPAMFLVSRGMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGF 85
Query: 122 AFLRYATEEESRRAIEGMHGK 142
F+ +AT++++ A++ + G+
Sbjct: 86 GFVTFATDQDAEAALQALDGR 106
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 58 CFPLACLPPSPHSLSTCQPKT---RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
C P + S+ Q + +LFV GLS +E+SL AF +GQ++E +V DK+
Sbjct: 12 CLASRGSPAAARSMLLAQSRGITYKLFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKV 71
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKV 143
+ P+GF F+++A+ EE+ A E M+GK
Sbjct: 72 TDIPKGFGFVKFASPEEANNAREEMNGKA 100
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 43 FDSLFSL-RQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGF 101
F+ L SL RQ + P+ + S C ++LF+ GL + T + +L++AF GF
Sbjct: 4 FNKLGSLARQSISQKGQVPMVSMVNSIR----CMSSSKLFIGGLPWSTDDQTLKDAFSGF 59
Query: 102 GQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
G++ E ++MD+ R RGF F+ Y + E + A+ M G+
Sbjct: 60 GEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQ 100
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 52/81 (64%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
A P+ +S ++LFV GL++ T++D+++ AF FG++ EV ++ D+ R RGF
Sbjct: 26 AAAIPAMFLVSRGMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGF 85
Query: 122 AFLRYATEEESRRAIEGMHGK 142
F+ +AT++++ A++ + G+
Sbjct: 86 GFVTFATDQDAEAALQALDGR 106
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + + P+ + S +S+ +LFV GLS+ T + SL+ AF FG++ E
Sbjct: 11 LRQGVSQSSNGPVTSMLGSLRYMSS-----KLFVGGLSWGTDDSSLKQAFTSFGEVTEAT 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ R RGF F+ ++ E+ + AI+ M GK
Sbjct: 66 VIADRETGRSRGFGFVSFSCEDSANNAIKEMDGK 99
>gi|297793541|ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFVS LS T++ SLR F FGQ++E L+ D+ RP+GF F+ + +E++++ A++
Sbjct: 7 TQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNALK 66
Query: 138 GMHGKVC 144
++GK+
Sbjct: 67 ALNGKIV 73
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y ++++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDA 62
Query: 136 IEGMHGKV 143
+EGM+GK
Sbjct: 63 LEGMNGKT 70
>gi|406944721|gb|EKD76419.1| hypothetical protein ACD_43C00118G0001 [uncultured bacterium]
Length = 84
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T LFV G++F++++D+LR AF G +V ++MDK+ R RGF F+ +T EE++ AI+
Sbjct: 3 TNLFVGGIAFKSTDDTLREAFMQAGNVVSAKIIMDKMTGRSRGFGFVEMSTPEEAQAAIQ 62
Query: 138 GMHGK 142
GK
Sbjct: 63 MWDGK 67
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R
Sbjct: 19 AVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGK 142
RGF F+ ++ +E + AI+ M G+
Sbjct: 79 RGFGFVNFSDDECANEAIKAMDGQ 102
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+TRL+V L FR SE+ LR F+ +GQ+ E+NL++DK+ + RGFAF+ T + ++ AI
Sbjct: 3 RTRLYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAI 62
Query: 137 EGMHG 141
+ ++G
Sbjct: 63 DSLNG 67
>gi|224131664|ref|XP_002321147.1| predicted protein [Populus trichocarpa]
gi|222861920|gb|EEE99462.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV+GLS+ E SL++AF FG + EVN++ D+ + R RGF F+ + E+E+ A +
Sbjct: 18 NKLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKEDEAVSAKD 77
Query: 138 GMHGK 142
M GK
Sbjct: 78 AMDGK 82
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 63 CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
C PPS S +LFV GLS+ SL+ AF FG + EV +V DK + R RGF
Sbjct: 29 CSPPSHAS------SNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFG 82
Query: 123 FLRYATEEESRRAIEGMHGK 142
F+ ++ E++++ A + M GK
Sbjct: 83 FVIFSNEDDAKCAKDAMDGK 102
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T D+L AF +G++VE +++D+ R RGF F+ +A+E+ + AIEG
Sbjct: 9 RCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEG 68
Query: 139 MHGK 142
M+G+
Sbjct: 69 MNGQ 72
>gi|297826049|ref|XP_002880907.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326746|gb|EFH57166.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 50/65 (76%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV G+SF ++E++L AF +GQ++ V+++MDKI RP+G A++ ++++EE+ +A+ +
Sbjct: 23 LFVKGISFSSTEETLTQAFSQYGQVLRVDVIMDKIRCRPKGIAYVTFSSKEEAGKALLEL 82
Query: 140 HGKVC 144
+G++
Sbjct: 83 NGRLV 87
>gi|124359615|gb|ABN06003.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 83
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFVS LSF T++ L + F FG L E L+ D+ RP+GF F+ Y +E E+ +A +
Sbjct: 7 TKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARK 66
Query: 138 GMHGKVCCCF 147
++G+V F
Sbjct: 67 ALNGRVILTF 76
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + P+ + S +S+ +LFV GLS+ T + SL+ AF FG++ E
Sbjct: 11 LRQGVSHSSNGPVTSMLGSLRYMSS-----KLFVGGLSWGTDDSSLKQAFTSFGEVTEAT 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ R RGF F+ ++ E+ + AI+ M GK
Sbjct: 66 VIADRETGRSRGFGFVSFSCEDSANNAIKEMDGK 99
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T + L++AF FG++++ ++ D+ R RGF F+ +A+E+ R
Sbjct: 2 AEVEYRCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMR 61
Query: 134 RAIEGMHGK 142
AIEGM+GK
Sbjct: 62 DAIEGMNGK 70
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ R F+ GLS+ TS+ SL+ AF+ FG LVE +V+DK + R RGF F+ + ++
Sbjct: 4 HEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMED 63
Query: 135 AIEGMHG 141
AI+ MHG
Sbjct: 64 AIKEMHG 70
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D + R
Sbjct: 19 AVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGK 142
RGF F+ ++ +E + AI+ M G+
Sbjct: 79 RGFGFVNFSDDECANEAIKAMDGQ 102
>gi|225432522|ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Vitis
vinifera]
Length = 145
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TR+F+ GL T E SL+ AF FG++ +V + +KI+++P GFAF + TEE ++ A++
Sbjct: 64 TRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVK 123
Query: 138 GMHGKVC 144
M GK C
Sbjct: 124 MMDGKAC 130
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+S +TRL+V L FR SE+ LR F+ +GQ+ E+NL++DK+ + RGFAF+ + +
Sbjct: 40 MSVFMNRTRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQ 99
Query: 131 ESRRAIEGMHG 141
++ AI ++G
Sbjct: 100 AAQSAINNLNG 110
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+++ EDSLR AF +G++VE +++D+ R RGF F+ + + E +
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 134 RAIEGMHGK 142
AI+ + G+
Sbjct: 96 SAIQALDGR 104
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q +L+V L+F SED +R F +G++ EV ++MD+ + R RGFAF+R AT +E+ +
Sbjct: 3 QQNQKLYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVRMATADEAGK 62
Query: 135 AIEGMHGK 142
A + + G+
Sbjct: 63 AKDALSGQ 70
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 47/65 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GLSF T+E L AF GQ+VE +VMD++++R +GF F+ +A+ +E+++A+
Sbjct: 34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALM 93
Query: 138 GMHGK 142
+G+
Sbjct: 94 EFNGQ 98
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 47/63 (74%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ FGQ+ E +V D+ NR RGF F+R++++ ++ +A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMD 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 49 LRQGRGRGACFPLA----CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQL 104
LRQG + L L + +S+ + +++FV G+SF T + SLR AF +G++
Sbjct: 11 LRQGANKRIGLDLHRSSLSLSQAVRWMSSMES-SKVFVGGISFSTDDQSLREAFTKYGEV 69
Query: 105 VEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+E +++D+ R RGF F+ Y + EE+ AI+ + G+
Sbjct: 70 IEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQ 107
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLS+ T E SL+ AF +G ++E ++MD+ R RGF F+ + + EE+ A++
Sbjct: 40 SKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQ 99
Query: 138 GMHGK 142
M G+
Sbjct: 100 AMDGQ 104
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
L+ PS +LF+ G+S+ T E LR AF +G +++ ++MD+ R R
Sbjct: 22 DLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSR 81
Query: 120 GFAFLRYATEEESRRAIEGMHGK 142
GF F+ +AT EE+ A++ M K
Sbjct: 82 GFGFITFATSEEASSALQAMDNK 104
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GLS+ E SL++AF FG + EV +V DK + R RGF F+ ++ E+ ++ A +
Sbjct: 36 NKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKD 95
Query: 138 GMHGKVCC 145
M GK
Sbjct: 96 AMDGKALL 103
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ +++FV G+SF T + SLR AF +G+++E +++D+ R RGF F+ Y + EE+
Sbjct: 38 SSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEA 97
Query: 133 RRAIEGMHGK 142
AI+ + G+
Sbjct: 98 SSAIQALDGQ 107
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T++ +L +AF +G ++E +V+D+ R RGF F+ + E + AI+G
Sbjct: 3 RCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDG 62
Query: 139 MHGK 142
MHGK
Sbjct: 63 MHGK 66
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+
Sbjct: 1 MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGQ 72
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLS+ TS+D+LR FQ FG++ E +V D+ R RGF F+R+AT+ E+ A+
Sbjct: 2 SKLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSALG 61
Query: 138 GMHGK 142
M+ +
Sbjct: 62 AMNNQ 66
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+
Sbjct: 1 MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGQ 72
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
S QP T LFV LS+ T+ED L AF FG + V L D+ + +P+GF ++ + +E
Sbjct: 203 SESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEG 262
Query: 132 SRRAIEGMHGK 142
+ +A E M GK
Sbjct: 263 ATKAYEAMKGK 273
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV LS+ D L FQG G +V + MD+ + + RGFA++ +++ E+++A+E M
Sbjct: 112 VFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEM 171
Query: 140 HGK 142
+GK
Sbjct: 172 NGK 174
>gi|78185978|ref|YP_374021.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78165880|gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 99
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
K +++ L + SED LR+AF FGQ+ N++MDK + R +GF F+ +++E R AI
Sbjct: 9 KMNIYIGNLPYSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSSDEAGRAAI 68
Query: 137 EGMH 140
E M+
Sbjct: 69 EAMN 72
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
L+ G G+ L+ S ++LFV GLS+ T E SL+ F +G+++E
Sbjct: 11 LKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + + EE+ A++ M G+
Sbjct: 71 VILDRETGRSRGFGFISFPSSEEATSAMQAMDGQ 104
>gi|212274941|ref|NP_001130982.1| hypothetical protein [Zea mays]
gi|194690622|gb|ACF79395.1| unknown [Zea mays]
gi|413951564|gb|AFW84213.1| hypothetical protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RLFV+GLS+ E SL +AF FG + EV ++ DK + R RGF F+ ++ + E++ A +
Sbjct: 48 SRLFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRGFGFVHFSNDNEAKCAKD 107
Query: 138 GMHGKV 143
M GKV
Sbjct: 108 AMDGKV 113
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GLS+ T + SL++AF FG++++ +V D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQ 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGR 72
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 6 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 65
Query: 129 EEESRRAIEGMHGK 142
+ R AIEGM+GK
Sbjct: 66 XDAMRSAIEGMNGK 79
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+A FG +V+ +++D+ + R
Sbjct: 19 AVSATTPMPSMLDAFRCMSTKLFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGK 142
RGF F+ ++ +E + AI+ M G+
Sbjct: 79 RGFGFVNFSDDESANEAIKAMDGQ 102
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLS +E SL AF +GQ++E +V DK+ + P+GF F+++A+ EE+ A E
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 139 MHGK 142
M+GK
Sbjct: 96 MNGK 99
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T ++V LSF+ +E+ LR AF+ +G++ VN++MD+ R RGFAF+ A E ++ AIE
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 138 GMHG 141
++G
Sbjct: 115 NLNG 118
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T ++V LSF+ +E+ LR AF+ +G++ VN++MD+ R RGFAF+ A E ++ AIE
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 138 GMHG 141
++G
Sbjct: 115 NLNG 118
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T ++V LSF+ +E+ LR AF+ +G++ VN++MD+ R RGFAF+ A E ++ AIE
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 138 GMHG 141
++G
Sbjct: 115 NLNG 118
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 49 LRQ---GRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLV 105
LRQ G A P+ + + +ST +LFV GLS+ T + SLR+AF FG +V
Sbjct: 11 LRQSISGNAVSATSPMKSMLDAVRCMST-----KLFVGGLSWGTDDQSLRDAFATFGDVV 65
Query: 106 EVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+ +++D+ + R RGF F+ ++ +E + AI+ M G+
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQ 102
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLS +E SL AF +GQ++E +V DK+ + P+GF F+++A+ EE+ A E
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 139 MHGK 142
M+GK
Sbjct: 96 MNGK 99
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 49/73 (67%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T + SL++AF FG+++E ++ D+ R RGF F+ ++ E+
Sbjct: 2 MASAEVEYRCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQ 61
Query: 131 ESRRAIEGMHGKV 143
R AI+ M+GKV
Sbjct: 62 SMRDAIDAMNGKV 74
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGK 142
M+G+
Sbjct: 67 MNGQ 70
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGK 142
M+G+
Sbjct: 67 MNGQ 70
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 47/65 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLSF T+E L AF GQ+VE +VMD++++R +GF F+ +A+ +E+++A+
Sbjct: 34 SKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKALM 93
Query: 138 GMHGK 142
+G+
Sbjct: 94 EFNGQ 98
>gi|242074112|ref|XP_002446992.1| hypothetical protein SORBIDRAFT_06g026496 [Sorghum bicolor]
gi|241938175|gb|EES11320.1| hypothetical protein SORBIDRAFT_06g026496 [Sorghum bicolor]
Length = 80
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 107 VNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKV 143
V LVMD++ANRPRGFAFL Y EEE+R A+EGMHGKV
Sbjct: 14 VCLVMDRVANRPRGFAFLSYTEEEEARGAMEGMHGKV 50
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ + LR AF GFG + E ++ D+ + RGF F+ Y + + + AI
Sbjct: 37 TKLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAIS 96
Query: 138 GMHGK 142
GM GK
Sbjct: 97 GMDGK 101
>gi|302754726|ref|XP_002960787.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
gi|300171726|gb|EFJ38326.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
Length = 359
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 54 GRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
GR LA + S + S Q + +L++ GLS+ TS ++L N F +G++ E + DK
Sbjct: 138 GRITVCNLASVGSSAGAGSADQAQRKLYIGGLSYETSNETLLNIFSQYGEIEEGAVAYDK 197
Query: 114 IANRPRGFAFLRYATEEESRRAIE 137
N+ RGFAF+ Y + E +R+AI+
Sbjct: 198 NTNKSRGFAFITYKSVEAARKAID 221
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI-- 136
+LFV GL++ T+ +LR+AFQ +G++ E ++ DK + RGF F+ + + ++RA+
Sbjct: 72 KLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALKE 131
Query: 137 --EGMHGKVCCC 146
+ + G++ C
Sbjct: 132 PSKTIDGRITVC 143
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+R +E LR F FG++ +V DK NR +GF F+ +++E++++AIEG
Sbjct: 4 IYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGT 63
Query: 140 HGK 142
+GK
Sbjct: 64 NGK 66
>gi|15224298|ref|NP_181287.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20197470|gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21536972|gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|114050677|gb|ABI49488.1| At2g37510 [Arabidopsis thaliana]
gi|330254316|gb|AEC09410.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 142
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFVSGLS T+ + L++AF FGQLV+ ++ D+ + R +GF F+ YAT E++ +A
Sbjct: 35 RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAE 94
Query: 139 MHGK 142
M+ K
Sbjct: 95 MNAK 98
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGK 142
M+G+
Sbjct: 67 MNGQ 70
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
P+ +P + S T+LFV GLS+ T + SLR+AF FG++V+ +++D+ R R
Sbjct: 17 PIGNVPVTSMLGSLRLMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSR 76
Query: 120 GFAFLRYATEEESRRAIEGMHGK 142
GF F+ + E + AI M GK
Sbjct: 77 GFGFVNFNDEGAASAAISEMDGK 99
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
Length = 135
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T++ +L +AF +G ++E +V+D+ R RGF F+ + E + AI+G
Sbjct: 9 RCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDG 68
Query: 139 MHGK 142
MHGK
Sbjct: 69 MHGK 72
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 68 XXXXRSAIEGMNGK 81
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++AF+ +G+LVE +V+DK + R RGF F+ + +E AIE
Sbjct: 230 RCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEA 289
Query: 139 MHG 141
M+G
Sbjct: 290 MNG 292
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 47/63 (74%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T+E++LR+ F+ FG + E +V D+ R RGF F+RY+ +E++++AI+
Sbjct: 2 SKLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAID 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 47/66 (71%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++FV GL+F T+E+ L AF +G +++ N++++K NR +GF ++ +A EEE+ +A
Sbjct: 33 SKVFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGYVIFAKEEEACKAQI 92
Query: 138 GMHGKV 143
M+GK+
Sbjct: 93 DMNGKI 98
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ SL+ AF+ FG LVE +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKE 67
Query: 139 MHG 141
MHG
Sbjct: 68 MHG 70
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 65 PPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
P+P L+ + +RLFV GLS+ T + SL+ AF FG +V+ +++D+ + R RGF F
Sbjct: 25 SPTPAMLNAIRCMSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGF 84
Query: 124 LRYATEEESRRAIEGMHGK 142
+ ++ E+ ++ A+ M G+
Sbjct: 85 VNFSDEDCAKEAMNAMDGQ 103
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 61
Query: 129 EEESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 62 XXXXRSAIEGMNGK 75
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T + SLR+AF FG++V+ +++D+ R RGF F+ ++ E + AI
Sbjct: 36 TKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAIS 95
Query: 138 GMHGK 142
M GK
Sbjct: 96 EMDGK 100
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T D+L AF FG+++E ++ D+ R RGF F+ ++ E+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEK 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 AMRDAIEGMNGQ 72
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T ++V LSF+ +E+ LR AF+ +G++ VN++MD+ R RGFAF+ A E ++ AIE
Sbjct: 66 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 125
Query: 138 GMHG 141
++G
Sbjct: 126 NLNG 129
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E++LR+AF FG + EV +++D+ R RGF F+ + + EE+ A++
Sbjct: 45 SKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQ 104
Query: 138 GMHGK 142
M G+
Sbjct: 105 EMDGR 109
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y + E+++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MTAMNGK 69
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E++++RAI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAIS 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T + SL AF +GQ++E ++ D+ R RGF F+ +++E+ R
Sbjct: 3 AEVEYRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMR 62
Query: 134 RAIEGMHGK 142
AIEGM+G+
Sbjct: 63 DAIEGMNGQ 71
>gi|22328599|ref|NP_193122.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|48310472|gb|AAT41827.1| At4g13860 [Arabidopsis thaliana]
gi|332657937|gb|AEE83337.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 87
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TR++V LS T++D LR AF G+G +V+ ++ D+ +R RGF F+ Y++ E+ A+
Sbjct: 3 TRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVS 62
Query: 138 GMHGK 142
GM GK
Sbjct: 63 GMDGK 67
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T +D+LR FQ FG + E +V D+ R RGF F+RY+++EE+ A++
Sbjct: 2 AKLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMD 61
Query: 138 GMH 140
M+
Sbjct: 62 NMN 64
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+++ EDSLR AF +G++V+ +++D+ R RGF F+ + + E +
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 134 RAIEGMHGK 142
AI+ + G+
Sbjct: 96 SAIQALDGR 104
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T + SLR+AF FG++V+ +++D+ R RGF F+ ++ E + AI
Sbjct: 36 TKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAIS 95
Query: 138 GMHGK 142
M GK
Sbjct: 96 EMDGK 100
>gi|391348809|ref|XP_003748634.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Metaseiulus occidentalis]
Length = 381
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ + +T P LF++ +++ TSE LR F+ +G + +V+L+ I+N+PRG
Sbjct: 85 IALWDPNNNPKATADPFKTLFIARINYETSEGKLRREFEQYGAIKQVSLIHSSISNKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGK 142
+AF+ YA E + A + GK
Sbjct: 145 YAFIEYAHERDMHAAYKHADGK 166
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L+++ +ED LR AF+ FG++ V ++ DK++ + RG AF+ A +EE AI+G+
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAIDGL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + + P++ + +S+ ++LF+ GLS+ + SL++AF +G++VE
Sbjct: 11 LRQGATQSSHAPVSSMLNYLRHMSS----SKLFIGGLSYGVDDQSLKDAFASYGEVVEAR 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ R RGF F+ + ++E + A+ M G+
Sbjct: 67 VITDRDTGRSRGFGFVNFTSDESATSALSAMDGQ 100
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + +LFV GLSF T E SL F +GQ+ EV +V D+ R RGF F+ + E++
Sbjct: 2 SSSDEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDA 61
Query: 133 RRAIEGMHGK 142
+ A+E M+GK
Sbjct: 62 KDAMEAMNGK 71
>gi|297827259|ref|XP_002881512.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
gi|297327351|gb|EFH57771.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFVSGLS T+ + L++AF FGQLV+ ++ D+ R +GF F+ YAT E++ +A
Sbjct: 35 RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRETGRSKGFGFVTYATIEDAEKAKAE 94
Query: 139 MHGK 142
M+ K
Sbjct: 95 MNAK 98
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 47/68 (69%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E+SL AF +G + +V+++ D+ + RGF F++Y E+++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGKV 143
++GM+G+
Sbjct: 63 MDGMNGQT 70
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 68 XXAMRSAIEGMNGK 81
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 68 XXAMRSAIEGMNGK 81
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ GL + + +L++AF GFG++ E ++MD+ R RGF F+ Y + E +
Sbjct: 32 CMSSSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENAS 91
Query: 134 RAIEGMHGK 142
A+ M G+
Sbjct: 92 EALSAMDGQ 100
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 55 RGACFPLACLPPSPHSLSTCQP-----KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNL 109
R C L L H+ + P +++FV GL+F T+ED L AF +G++++ ++
Sbjct: 41 REICGSLMSLSKLQHASPSQLPFLRTMTSKIFVKGLAFSTTEDKLAEAFSQYGKVLKADI 100
Query: 110 VMDKIANRPRGFAFLRYATEEESRRAIEGMHGKV 143
V+++ R +GF ++ +A EE++++A GM+ K+
Sbjct: 101 VLNRAKTRSKGFGYVTFAKEEDAQKAQIGMNRKI 134
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P+ R F+ GL++ TS+ LR+AF+ +G LVE +V+DK + R RGF F+ + ++
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 135 AIEGMHG 141
AI M+G
Sbjct: 64 AIAAMNG 70
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 61
Query: 129 EEESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 62 XXAMRSAIEGMNGK 75
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV LS+ T+++SL++AF +G++ E +VMDK + R RGFAF+ + ++
Sbjct: 40 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEE 99
Query: 135 AIEGMHG 141
AIE M+G
Sbjct: 100 AIEDMNG 106
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 45/64 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ +ED LR AF+ G++ V+++ DK + R +GF F+ +++ E++ AIEG
Sbjct: 2 KIYVGNLSYEVNEDDLRQAFEQLGKVDSVSIINDKYSGRSKGFGFVEMSSDAEAQAAIEG 61
Query: 139 MHGK 142
++GK
Sbjct: 62 LNGK 65
>gi|119357086|ref|YP_911730.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119354435|gb|ABL65306.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L++ SED LR+AF FGQ+ N++ DK + R +GF F+ + + E+R AIE M
Sbjct: 3 IYIGNLAYTVSEDDLRDAFSQFGQVDSANIINDKFSGRSKGFGFIEMSNDSEAREAIESM 62
Query: 140 HGK 142
+ +
Sbjct: 63 NDQ 65
>gi|38346812|emb|CAD41379.2| OSJNBa0088A01.19 [Oryza sativa Japonica Group]
Length = 92
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 32/36 (88%)
Query: 107 VNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
VNLVM+++A RPRGFAFL YA+EEES+ A+EGM GK
Sbjct: 39 VNLVMERVAKRPRGFAFLSYASEEESKNAMEGMQGK 74
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV LS+ +EDSL N F FG LVE+NL +DK +N+ GFAF+ + + + +A+
Sbjct: 409 RLFVRNLSYTCTEDSLTNLFSQFGPLVEINLPIDKNSNKTTGFAFVTFMMADHAIKAMSK 468
Query: 139 MHGKV 143
+ G +
Sbjct: 469 LDGSI 473
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q +++ V + F + L+ F FG + + L KI RGFAF+ + T+++++R
Sbjct: 789 QVSSKMVVRNIPFEATVKELQELFSTFGHIKSLRLP-KKITGTHRGFAFIDFTTKQDAKR 847
Query: 135 AIEGM 139
A + +
Sbjct: 848 AFKAL 852
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GLS+ T++ SL+ AF FG++ E ++ D+ R RGF F+ ++ EE++++A
Sbjct: 37 NKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAAS 96
Query: 138 GMHGK 142
M G+
Sbjct: 97 SMDGQ 101
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P+ R FV GLS+ TS+ +L +AF FG L+E +V+D+ R RGF F+ + ++ A
Sbjct: 5 PEYRCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDA 64
Query: 136 IEGMHG 141
I+ MHG
Sbjct: 65 IDSMHG 70
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL + T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGK 142
M+G+
Sbjct: 67 MNGQ 70
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVS LS T++ SLR F FGQ+ E L+ D RP+GF F+ + +E+++R+A++
Sbjct: 8 QLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKALKS 67
Query: 139 MHGKVC 144
+ GK+
Sbjct: 68 LDGKIV 73
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 76 PKT-RLFVSGLSFRTSEDSLRNAFQGFGQLV-EVNLVMDKIANRPRGFAFLRYATEEESR 133
PKT ++FV+ LS+ T EDSL+ AF+ FG +V E+ L + + R RG A++++ TE+E+
Sbjct: 170 PKTDKVFVANLSYDTDEDSLKQAFEKFGTIVGEIGLPISRDTGRIRGIAYIQFETEDEAE 229
Query: 134 RAIEGMHG 141
A++GM+G
Sbjct: 230 AAVKGMNG 237
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 51 QGRGRGACFPLACLPPSP------------HSLST-CQPKTRLFVSGLSFRTSEDSLRNA 97
+G+G GAC P + SP H +T + +LFV GLSF T+E SL
Sbjct: 14 RGKGHGAC-PRSVRGASPGGPVTPESSQAHHGKATMASDEGKLFVGGLSFDTNEQSLEQV 72
Query: 98 FQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
F +GQ+ EV +V D+ R RGF F+ + ++++ A+ M+GK
Sbjct: 73 FSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGK 117
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T +FVS LSF T+E+ L+N F FG + E L+ D RP+GF F++Y+++ + +A++
Sbjct: 26 TEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKAVK 85
Query: 138 GMHGKVC 144
M G++
Sbjct: 86 AMDGRII 92
>gi|449468384|ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
gi|449522522|ref|XP_004168275.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 145
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV+GLS+ E SL++AF FG++ EV +V DK + R RGF F+ +A +++ A +
Sbjct: 44 NKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAKD 103
Query: 138 GMHGK 142
M GK
Sbjct: 104 AMDGK 108
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T++ SL AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQ 60
Query: 131 ESRRAIEGMHGKV 143
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGQT 73
>gi|194466189|gb|ACF74325.1| unknown [Arachis hypogaea]
Length = 112
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V+GLS+ T+E LR+AF+ G+L+EV ++ D + + +G+ F+R+ TE + +
Sbjct: 32 TNLLVTGLSYDTNETVLRDAFEQHGELIEVKVICDHVTGKSKGYGFVRFTTETSAATGRK 91
Query: 138 GMHGKV 143
MH K+
Sbjct: 92 EMHKKI 97
>gi|223936242|ref|ZP_03628155.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223895104|gb|EEF61552.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 103
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+L+V LSF+ +E+ +++ F G + EVNL+MDK+ R RGF F+ AT E + AI
Sbjct: 3 TKLYVGNLSFKATENDIQDLFSAHGPVNEVNLIMDKMTGRARGFGFVTMATAEGAEAAIA 62
Query: 138 GMHGK 142
++GK
Sbjct: 63 DLNGK 67
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T ++L AF +G++++ ++ D+ R RGF F+ +A E+
Sbjct: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGQ 72
>gi|357635466|ref|ZP_09133344.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|386393370|ref|ZP_10078151.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
gi|357584020|gb|EHJ49353.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|385734248|gb|EIG54446.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
Length = 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF ++ED +R F FG+++ VNL+ D+ R RGF F+ EE +R AI+G
Sbjct: 4 KLYVGNLSFNSTEDDIRTQFATFGEVISVNLITDRETGRLRGFGFVEM-DEEGARAAIQG 62
Query: 139 MHGK 142
M GK
Sbjct: 63 MDGK 66
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 56 GACFPLACLPPSPHSLSTCQP-------KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
G+ F + L S + ST T+LFV GLS+ T + SL++AF FG++VE
Sbjct: 8 GSLFRHSALASSASTGSTPAMFNAARLMSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEAR 67
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ + RGF F+ ++ ++++ A+ M G+
Sbjct: 68 VITDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQ 101
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T L AF +G +VE ++ D+ R RGF F+ +A+E+
Sbjct: 1 MASADVEYRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASED 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGQ 72
>gi|194385376|dbj|BAG65065.1| unnamed protein product [Homo sapiens]
Length = 142
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 139 MHGKV 143
M+GKV
Sbjct: 67 MNGKV 71
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|357131533|ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 141
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV+GLS+ E SL +AF FG + EV ++ DK + R RGF F++++ + E++ A +
Sbjct: 48 KLFVAGLSWSADERSLMDAFSSFGTVTEVRIMYDKNSGRSRGFGFVQFSNDYEAKCAKDA 107
Query: 139 MHGKV 143
M GKV
Sbjct: 108 MDGKV 112
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 43/62 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L+++ +ED LR AF+ FG++ V ++ DK++ + RG AF+ A ++E AI+G+
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAIDGL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T ++L AF +G+++E ++ D+ R RGF F+ + +E+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQ 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 AMRDAIEGMNGQ 72
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T ++L AF +G+++E ++ D+ R RGF F+ + +E+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQ 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 AMRDAIEGMNGQ 72
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G++++ ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 65 PPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
P ++S+ Q + LFV LS+ E LRN F+ FG++ V +V D+ + R +GF +
Sbjct: 288 PKKVKTVSSAQEGAKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGY 347
Query: 124 LRYATEEESRRAIEGMHGK 142
+ Y T E +++A+E M GK
Sbjct: 348 VEYTTNEAAKKALEEMKGK 366
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 41/64 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV+ LSF E ++ F+GFG +V + + D + +P+GF +++Y + +R+A+E M
Sbjct: 404 VFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAVEEM 463
Query: 140 HGKV 143
+G +
Sbjct: 464 NGAL 467
>gi|302769522|ref|XP_002968180.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
gi|300163824|gb|EFJ30434.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
Length = 296
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
LA + S + Q + +L++ GLS+ TS ++L N F +G++ E + DK N+ RG
Sbjct: 107 LASVGTSGSGGTNDQAQRKLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRG 166
Query: 121 FAFLRYATEEESRRAIE 137
FAF+ Y T E +R AI+
Sbjct: 167 FAFVTYKTVEAARNAID 183
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI-- 136
+LFV GL++ T+ LR AF+ FG++ E +++DK + RGF F+ + + ++RA+
Sbjct: 34 KLFVRGLAWETTSQDLREAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQRALKE 93
Query: 137 --EGMHGKVCCC 146
+ + G++ C
Sbjct: 94 PSKTIDGRITVC 105
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ T+++SL++AF FG L E +V+DK + R RGF F+ + ++ AIEG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
Length = 153
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG++ E +V D+ R RGF F+RY E+++++AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAIT 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV G+S+ T E LR AF +G++V+ +++D+ R RGFAF+ + + EE+
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 134 RAI----EGMHGK 142
A+ + +HG+
Sbjct: 90 NAMQLDGQDLHGR 102
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGK 142
R AIEGM+GK
Sbjct: 68 XXAMRSAIEGMNGK 81
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVS LS T++ SLR F FGQ+ E L+ D RP+GF F+ + +E+++R+A++
Sbjct: 8 QLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKS 67
Query: 139 MHGKVC 144
+ GK+
Sbjct: 68 LDGKIV 73
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A PP P T P RL+V L F +ED LR F+ FG++ + L+MD R +G
Sbjct: 271 MASTPPQPPPKVTSGP-MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKG 329
Query: 121 FAFLRYATEEESRRAIEGMHG 141
+ F+ + +++++A+E ++G
Sbjct: 330 YGFITFHNADDAKKALEQLNG 350
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|145218978|ref|YP_001129687.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205142|gb|ABP36185.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 89
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L + +ED LR+ F FGQ+ N++ DK + R +GF F+ + E+R AIE M
Sbjct: 3 IYVGNLPYSITEDDLRDTFSAFGQVDSANIITDKFSGRSKGFGFVDMPNDSEAREAIESM 62
Query: 140 HGK 142
H K
Sbjct: 63 HEK 65
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E SL +AF +G + V++ ++ NR RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDA 62
Query: 136 IEGMHGK 142
+EGM+GK
Sbjct: 63 LEGMNGK 69
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D F L QG + A L P S + +T P LFV+ L++ T
Sbjct: 92 PVPTCETRAEKKDRIQKFKLEQGAAKVAEDLLKYDPQSDPN-TTGDPYKTLFVARLNYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
SE ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+
Sbjct: 151 SESRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGR 203
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T E SL AF FG+LV+ ++ D+ R RGF F+ + E+ + AIEG
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 139 MHGK 142
M+G+
Sbjct: 69 MNGQ 72
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L + SED LR+AF FG++ N++ DK + R +GF F+ ++ +R AIE M
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESM 62
Query: 140 HGK 142
H K
Sbjct: 63 HNK 65
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKV 143
R AIE M+G +
Sbjct: 61 AMRSAIEAMNGHI 73
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKV 143
R AIE M+G +
Sbjct: 61 AMRSAIEAMNGHI 73
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKV 143
R AIE M+G +
Sbjct: 61 AMRSAIEAMNGHI 73
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKV 143
R AIE M+G +
Sbjct: 61 AMRSAIEAMNGHI 73
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKV 143
R AIE M+G +
Sbjct: 61 AMRSAIEAMNGHI 73
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS+ +L AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEK 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGQ 72
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS+ +L AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEK 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGQ 72
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 46/69 (66%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T +++L+ AF +G++++ ++ D+ R RGF F+ + +EE R
Sbjct: 2 AETEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 134 RAIEGMHGK 142
+AIE M+GK
Sbjct: 62 QAIEEMNGK 70
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +RLFV GLS+ T + SL++AF FG++ + ++ D+ R RGF F+ + E +
Sbjct: 31 CMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAG 90
Query: 134 RAIEGMHG 141
A+ M G
Sbjct: 91 SALSSMDG 98
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV LS+ T+++SL++AF +G++ E +VMDK + R RGFAF+ + ++
Sbjct: 4 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEE 63
Query: 135 AIEGMHG 141
AIE M+G
Sbjct: 64 AIEDMNG 70
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 46/69 (66%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
T+LFV+GLS+ T+E LR+AF G+++EV ++ D + + RG+ F+R+ +E +
Sbjct: 55 HSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAA 114
Query: 135 AIEGMHGKV 143
A + M+G++
Sbjct: 115 ARKEMNGQI 123
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + +LFV GLSF T E +L F +GQ+ EV +V D+ R RGF F+ + E++
Sbjct: 2 SSSDEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDA 61
Query: 133 RRAIEGMHGK 142
+ A+E M+GK
Sbjct: 62 KDAMEAMNGK 71
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR+ F FG + E +V D+ NR RGF F+R++ E E+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNA 64
Query: 139 MHGK 142
M+ +
Sbjct: 65 MNNQ 68
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|340057783|emb|CCC52132.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 120
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ Q + RLFV L+F+ +E+ +RN F +G +++VNL+ D+ N+ +G AF+ Y E
Sbjct: 1 MAQQQKRARLFVGQLNFQATENDVRNIFAFYGHVLQVNLLRDRATNKSKGSAFVEYGATE 60
Query: 131 ESRRAIEGMHGK 142
E+ AI +H +
Sbjct: 61 EADCAIRCLHNR 72
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 SMLDAIENMNGK 72
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 SMLDAIENMNGK 72
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 SMLDAIENMNGK 72
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 SMLDAIENMNGK 72
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 SMLDAIENMNGK 72
>gi|374584597|ref|ZP_09657689.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373873458|gb|EHQ05452.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 109
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+L+V GLS+ T++ +LR++F+ G + E +VMD+ + RGF F+ +A E +R AI
Sbjct: 3 TKLYVGGLSWDTTDTTLRHSFEAHGSVHEAIVVMDRYTGKSRGFGFVTFADENSARTAIS 62
Query: 138 GMHG 141
M+G
Sbjct: 63 AMNG 66
>gi|159482094|ref|XP_001699108.1| nuclear SR-like RNA binding protein [Chlamydomonas reinhardtii]
gi|158273171|gb|EDO98963.1| nuclear SR-like RNA binding protein [Chlamydomonas reinhardtii]
Length = 194
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 64 LPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
LPP+ + +P T+LFVSG+ FR SE L F FG++ E +V + + + RGFAF
Sbjct: 102 LPPA--DRTPPRPGTQLFVSGIDFRVSERELERKFSEFGRVKEARVVRNPFSGQSRGFAF 159
Query: 124 LRYATEEESRRAIEGMHGK 142
+ ++ +E+ RA MHG+
Sbjct: 160 VGMSSTDEAERAARDMHGR 178
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ L+ F+ FG L+E +V+DK + R RGF F+ + ++ AIEG
Sbjct: 8 RCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ T+++SL++AF FG L E +V+DK + R RGF F+ + ++ AIEG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|34535789|dbj|BAC87434.1| unnamed protein product [Homo sapiens]
Length = 135
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 139 MHGKV 143
M+GKV
Sbjct: 67 MNGKV 71
>gi|302788860|ref|XP_002976199.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
gi|300156475|gb|EFJ23104.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
Length = 343
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 54 GRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
GR LA + S + Q + +L++ GLS+ TS ++L N F +G++ E + DK
Sbjct: 147 GRITVCNLASVGTSGSGGTNDQAQRKLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDK 206
Query: 114 IANRPRGFAFLRYATEEESRRAIE 137
N+ RGFAF+ Y T E +R AI+
Sbjct: 207 NTNKSRGFAFVTYKTVEAARNAID 230
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI-- 136
+LFV GL++ T+ LR+AF+ FG++ E +++DK + RGF F+ + + ++RA+
Sbjct: 81 KLFVRGLAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQRALKE 140
Query: 137 --EGMHGKVCCC 146
+ + G++ C
Sbjct: 141 PSKTIDGRITVC 152
>gi|194336480|ref|YP_002018274.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308957|gb|ACF43657.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 95
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L++ SED LR+AF FG++ +++ DK + R +GF F+ + E+R AIE M
Sbjct: 3 IYIGNLAYTVSEDDLRDAFSEFGEVANASIINDKFSGRSKGFGFVEMPKDSEAREAIESM 62
Query: 140 HGK 142
+GK
Sbjct: 63 NGK 65
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
P+ +S C +++FV GLS+ + +LR +F FG ++E ++ D+ R RGF F+
Sbjct: 28 PAIYSAFRCMS-SKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVT 86
Query: 126 YATEEESRRAIEGMHGK 142
+A+ +E+ A+E M GK
Sbjct: 87 FASPDEANAAVEAMDGK 103
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++L+V LSF TSE LR AF G L +V L D+ RPRGFAF+ + T EES+ A E
Sbjct: 3 SKLYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATE 62
Query: 138 GMHG 141
++G
Sbjct: 63 KLNG 66
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS+ TSEDSLRN F FG + ++ D+ +GF F+ +T+EE+ AI G
Sbjct: 25 KLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEASAAIAG 84
Query: 139 MHGK 142
+G+
Sbjct: 85 TNGR 88
>gi|297736978|emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TR+F+ GL T E SL+ AF FG++ +V + +KI+++P GFAF + TEE ++ A++
Sbjct: 64 TRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVK 123
Query: 138 GMHGK 142
M GK
Sbjct: 124 MMDGK 128
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFVS LSF T++ L + F FG L E L+ D+ RP+GF F+ Y +E E+ +A +
Sbjct: 7 TKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARK 66
Query: 138 GMHGKVC 144
++G++
Sbjct: 67 ALNGRIV 73
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ GL + + LR AF FG++ E ++ D+ R RGF F+ Y+ + ++ AI
Sbjct: 37 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 96
Query: 138 GMHGK 142
M GK
Sbjct: 97 AMDGK 101
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+T L+V+ L +ED L N F G +V++NL+ DKI PRG AF+R+ EE+ AI
Sbjct: 112 ETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAI 171
Query: 137 EGMHGKV 143
E ++G +
Sbjct: 172 EHLNGTI 178
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
L P ++ ST P LFVS +S++TSE L+N F +G + ++ LV D++ +P+G
Sbjct: 81 LKQWDPHSNTKSTGDPYKTLFVSRISYKTSESKLKNEFSQYGPIKKIRLVTDQVTGKPKG 140
Query: 121 FAFLRYATEEESRRAIEGMHGK 142
+AF+ + E + + A + G+
Sbjct: 141 YAFIEFEKERDMKIAYKQADGQ 162
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 SMLDAIENMNGK 72
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS+ E SL++AF FG++ EV + DK + R RGF F+ +A E ++ A +
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 139 MHGK 142
M GK
Sbjct: 102 MDGK 105
>gi|335423511|ref|ZP_08552532.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
gi|334891336|gb|EGM29584.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
Length = 90
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+ T++D LR AF+ FG++ ++MD+ R RGF F+ + ++++AIEGM
Sbjct: 3 IYVGNLSWNTNDDELRGAFEAFGEVSSAKVIMDRETGRSRGFGFVEMPDDNDAKQAIEGM 62
Query: 140 HGK 142
+ K
Sbjct: 63 NNK 65
>gi|119358437|ref|YP_913081.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119355786|gb|ABL66657.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L ++ +ED LR+AF FGQ+ N++ DK + R +GF F+ ++E+R AIE M
Sbjct: 3 IYIGNLPYQVTEDDLRDAFSQFGQVDSANIITDKFSGRSKGFGFVDMPHDDEAREAIESM 62
Query: 140 HGK 142
+ K
Sbjct: 63 NDK 65
>gi|361067297|gb|AEW07960.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 91 EDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKVCC 145
E +L AF FG++VEV +VMD+++ R +GF F++YA+E ++ RA M+GKV
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLS 55
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + E + AI M GK
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV G+S+ T E LR AF +G++V+ +++D+ R RGFAF+ + + EE+
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 134 RAI----EGMHGKVCCCFWMAE 151
A+ + +HG+ + E
Sbjct: 90 NAMQLDGQDLHGRRIRVNYATE 111
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV G+S+ T E LR AF +G++V+ +++D+ R RGFAF+ + + EE+
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 134 RAI----EGMHGKVCCCFWMAE 151
A+ + +HG+ + E
Sbjct: 90 NAMQLDGQDLHGRRIRVNYATE 111
>gi|196234692|ref|ZP_03133505.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196221240|gb|EDY15797.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 126
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF T+E L++AF G + EV L+ DK R RGFAF+ AT +E+++AI
Sbjct: 4 KLYVGNLSFDTTEVDLQDAFAEAGTVQEVALMQDKFTGRSRGFAFVTMATPDEAQKAISI 63
Query: 139 MHGKVC 144
HGK
Sbjct: 64 FHGKTL 69
>gi|361067299|gb|AEW07961.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126579|gb|AFG43909.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126581|gb|AFG43910.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126583|gb|AFG43911.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126585|gb|AFG43912.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126587|gb|AFG43913.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126589|gb|AFG43914.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126591|gb|AFG43915.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 91 EDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKVCC 145
E +L AF FG++VEV +VMD+++ R +GF F++YA+E ++ RA M+GKV
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLS 55
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+T L+V+ L +E + F FGQ+V+ N++ DK+ PRG AF+RY EE++ AI
Sbjct: 184 ETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAI 243
Query: 137 EGMHGKV 143
+HG +
Sbjct: 244 NQLHGTI 250
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G++++ ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G++++ ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++++L AF +G++VE ++ D+ R RGF F+ + E+ R AIEG
Sbjct: 7 RCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 139 MHGK 142
M+G+
Sbjct: 67 MNGQ 70
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL+F T+E+SL F +GQ+ EV +V D+ + R RGF F+ + E+++ A
Sbjct: 4 DEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDA 63
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 64 MMAMNGK 70
>gi|356550257|ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV LSF T+++ L+ F FG + + +L +D I RP+GF F+ + +E E+ +A +
Sbjct: 7 TKLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKACK 66
Query: 138 GMHGKVC 144
M+G++
Sbjct: 67 AMNGRIV 73
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+T L+V+ L +E + F FGQ+V+ N++ DK+ PRG AF+RY EE++ AI
Sbjct: 167 ETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAI 226
Query: 137 EGMHGKV 143
+HG +
Sbjct: 227 NQLHGTI 233
>gi|156376666|ref|XP_001630480.1| predicted protein [Nematostella vectensis]
gi|156217502|gb|EDO38417.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+LFV GLS+ T+++SL+ F +G+LV V++ MD + RPRGFAF+++ + E+
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEA 83
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAF-QGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++FV GL TS++ +R F + + + E+ + + +NR RGF F+ + +E+
Sbjct: 118 KIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSED 170
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T++ SL AF +G ++E ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEK 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 SMRDAIEGMNGQ 72
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + +L AF FG++VE ++ D+ R RGF F+ + E+
Sbjct: 1 MAAADVEFRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEK 60
Query: 131 ESRRAIEGMHGK 142
R AIEGM+G+
Sbjct: 61 AMRDAIEGMNGQ 72
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + E + AI M GK
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + E + AI M GK
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + E + AI M GK
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+++D+ R RGF F+ + E + AI M GK
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G++++ ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M+GK
Sbjct: 69 MNGK 72
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +VE ++ D+ R RGF F+ +A+E
Sbjct: 1 MASAYVEYRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASEN 60
Query: 131 ESRRAIEGMHGK 142
+ AIEGM+G+
Sbjct: 61 SMKDAIEGMNGQ 72
>gi|9757907|dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana]
Length = 112
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 82 VSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHG 141
++GLS T++ SLR F FGQ+ E L+ D+ RP+GF F+ + +E+++++A++ ++G
Sbjct: 25 LAGLSAYTTDQSLRQLFAPFGQITESRLIKDQQTQRPKGFGFITFESEDDAQKALKALNG 84
Query: 142 KVC 144
K+
Sbjct: 85 KIV 87
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P+ R F+ GL++ TS+ LR+AF+ +G LVE +V+DK + R RGF F+ + ++
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 135 AIEGMHG 141
AI M+G
Sbjct: 64 AIAAMNG 70
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 62 ACLPPSPHSLSTCQPKTRLFV-SGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
A P+ + ++LF+ +GL++ T E++LR+AF FG + EV +++D+ R RG
Sbjct: 29 AVAVPAMLVVQRMMSSSKLFIGAGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRG 88
Query: 121 FAFLRYATEEESRRAIEGMHGK 142
F F+ + + EE+ A++ M G+
Sbjct: 89 FGFVNFTSPEEAEVALQEMDGR 110
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T++ SL AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEK 60
Query: 131 ESRRAIEGMHGKV 143
+ AIEGM+G+
Sbjct: 61 SMKDAIEGMNGQT 73
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L QG + A L P T P LFV+ L++ T
Sbjct: 91 PVPTCETRAEKKDRIRQLKLEQGAAKVA-EELQKYDPQNDPNVTGDPYKTLFVARLNYET 149
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
SE ++ F+ +G + V LV DK+ N+PRG+AF+ Y + + A + G+
Sbjct: 150 SEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYVHTRDMKSAYKQADGR 202
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T +FVS LSF T+E+ ++ F FG + E L+ D+ R +GF F++Y+++ E+ +A++
Sbjct: 6 TEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKAVK 65
Query: 138 GMHGKV 143
M G++
Sbjct: 66 AMDGRI 71
>gi|71403849|ref|XP_804683.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|71422041|ref|XP_812004.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70867782|gb|EAN82832.1| RNA-binding protein, putative [Trypanosoma cruzi]
gi|70876732|gb|EAN90153.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 126
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+ +P+ RLFV L+F +ED +R F +G ++ VNL+ DK NR +G AF+ Y +
Sbjct: 1 MPQSKPRARLFVGQLNFGATEDDIRAIFDFYGHVLSVNLLHDKSKNRSKGSAFVEYGSTG 60
Query: 131 ESRRAIEGMHGK 142
E+ AI +H +
Sbjct: 61 EADCAIRSLHNR 72
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + P++ + +S+ ++LF+ GLS+ + SLR+AF +G +VE
Sbjct: 11 LRQGATQSTQAPVSSMLNYLRHMSS----SKLFIGGLSYNVDDQSLRDAFTTYGDVVEAR 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
++ D+ R RGF F+ + +EE + A+ M G+
Sbjct: 67 VITDRETGRSRGFGFVNFTSEESATSALS-MDGQ 99
>gi|389632187|ref|XP_003713746.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
gi|351646079|gb|EHA53939.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
Length = 236
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ +G + E +V D+ R RGF F+RY E+++++AI
Sbjct: 57 SKLFIGGLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKAIT 116
Query: 138 GMH 140
M+
Sbjct: 117 AMN 119
>gi|290990125|ref|XP_002677687.1| predicted protein [Naegleria gruberi]
gi|284091296|gb|EFC44943.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
L P+ + +T +P LF+S +++ T+ED+LRNAF FG + V +V D N+ RG
Sbjct: 91 LQDWDPNNDTKATTEPFNTLFISKMNYETTEDTLRNAFGKFGPIKTVRVVRDASTNKSRG 150
Query: 121 FAFLRYATEEESRRA 135
+AF+ + E+ + A
Sbjct: 151 YAFVEFEKHEDMKEA 165
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +E+ LR F+ FG++ + L+MD NR +G+ F+ Y
Sbjct: 21 QPKSHVGPMRLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNA 80
Query: 130 EESRRAIEGMHG 141
E++++A+E ++G
Sbjct: 81 EDAKKALEQLNG 92
>gi|223940412|ref|ZP_03632265.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223890907|gb|EEF57415.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 118
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV L F T+E+ L++ F G G ++ VN++ D+ R RGFAF+ ++ E+ A+
Sbjct: 3 TKLFVGNLPFSTTENDLQDHFSGAGTVIAVNIMQDRATGRSRGFAFIEMGSQAEADAAVA 62
Query: 138 GMHGK 142
HGK
Sbjct: 63 QYHGK 67
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 58 CFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANR 117
C L + S+S+ ++LFV GLS+ T E SL+ AF G+++E ++MD+ R
Sbjct: 24 CASRTSLYQAIRSMSS----SKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGR 79
Query: 118 PRGFAFLRYATEEESRRAIEGMHGK 142
RGF F+ + + EE+ A+ + G+
Sbjct: 80 SRGFGFVSFTSTEEAASALTALDGQ 104
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like [Ornithorhynchus
anatinus]
Length = 270
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 139 MHGK 142
M+GK
Sbjct: 67 MNGK 70
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ TRLF+ GLS LR AFQ +G+L E + +D+++ R RGF F+ + E+++
Sbjct: 10 AEDGTRLFIGGLSSEVDNTKLREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFYDPEDAQ 69
Query: 134 RAIEGMHGKVCC 145
AI+ M GK C
Sbjct: 70 DAIDQMTGKELC 81
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+T L+V+ L +E + F FGQ+V+ N++ DK+ PRG AF+RY EE++ AI
Sbjct: 123 ETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAI 182
Query: 137 EGMHGKV 143
+HG +
Sbjct: 183 NQLHGTI 189
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T ++V LS+RT+ED LRNAF FG + +++ D+ + R +GF F+ E +++AIE
Sbjct: 2 TNIYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIE 61
Query: 138 GMHGK 142
++ K
Sbjct: 62 SLNDK 66
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ T+++SL++AF FG L E +V DK + R RGF F+ + ++ AIEG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++D+LR AF+ +G +V+ ++ D+ R RGF F+ Y++EEE+ AI G
Sbjct: 4 KIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISG 63
Query: 139 MH 140
++
Sbjct: 64 LN 65
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 45/65 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E++LR+AF FG + +V +++D+ R RGF F+ + + +E+ A++
Sbjct: 45 SKLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVALQ 104
Query: 138 GMHGK 142
M G+
Sbjct: 105 EMDGR 109
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ GLS+ T + SLR+AF FG +V+ +++D+ R RGF F+ + E + AI
Sbjct: 16 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 75
Query: 138 GMHGK 142
M GK
Sbjct: 76 EMDGK 80
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L +AF +G++V+ ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 134 RAIEGMHGK 142
AIEGM+G+
Sbjct: 62 DAIEGMNGQ 70
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L +G + A L P T P LFV+ L + T
Sbjct: 91 PVPTCETRAEKKDRIRQLKLEEGAAKVA-EELQKYDPQNDPNVTGDPYKTLFVARLGYET 149
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
SE ++ F+ +G + V LV DK+ N+PRG+AF+ YA + + A + G+
Sbjct: 150 SEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYAHTRDMKSAYKQADGR 202
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ R FV GL++ T++ SL AF FG++ + ++ D+ R RGF F+ +++ E + A
Sbjct: 3 EEYRCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNA 62
Query: 136 IEGMHGK 142
IEGM+G+
Sbjct: 63 IEGMNGQ 69
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR F FG + E +V D+ NR RGF F+R++++ E+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 139 MHGK 142
M+ +
Sbjct: 65 MNNQ 68
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 42/64 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ + +LR AF +G++ E ++MD+ R RGF F+ + + E++ A++
Sbjct: 10 SKLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQ 69
Query: 138 GMHG 141
GM G
Sbjct: 70 GMDG 73
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR F FG + E +V D+ NR RGF F+R+++E E+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNA 64
Query: 139 MHGK 142
M+ +
Sbjct: 65 MNNQ 68
>gi|116206982|ref|XP_001229300.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
gi|88183381|gb|EAQ90849.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
Length = 179
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E ++ +AIE
Sbjct: 2 SKLFIGGLAWHTEEPTLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEGDAIKAIE 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T D+L AF +G +VE ++ D+ R RGF F+ +A+E+
Sbjct: 1 MASADVEFRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQ 60
Query: 131 ESRRAIEGMHGK 142
+ AI GM+G+
Sbjct: 61 SMKDAIAGMNGQ 72
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T+++SL AF FG + + ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMR 61
Query: 134 RAIEGMHGK 142
AIEGM+G+
Sbjct: 62 DAIEGMNGQ 70
>gi|255944269|ref|XP_002562902.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587637|emb|CAP85680.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 83 SGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
SGLS+ TS+D+LR FQ FG++ E +V D+ R RGF F+R+AT+ E+ A+ M+ +
Sbjct: 4 SGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATQRSRGFGFVRFATDAEADAALGAMNNQ 63
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 42/65 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLS+ T + +L++ F +G ++E +++D+ + +G+ F+ Y + EE+ A+
Sbjct: 31 SKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAVT 90
Query: 138 GMHGK 142
M GK
Sbjct: 91 AMDGK 95
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR F FG + E +V D+ NR RGF F+R++++ E+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 139 MHGK 142
M+ +
Sbjct: 65 MNNQ 68
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+RYA + E+ A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+RYA + E+ A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P+ R F+ GL++ TS+ LR+AF+ +G LVE +V+DK + R RGF F+ + ++
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 135 AIEGMHG 141
AI M+G
Sbjct: 64 AIAAMNG 70
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T E L F +GQ+ EV +V D+ R RGF F+ + E+++ A
Sbjct: 4 DEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDA 63
Query: 136 IEGMHGKV 143
+ GM+GK
Sbjct: 64 MAGMNGKT 71
>gi|303245896|ref|ZP_07332178.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302492679|gb|EFL52547.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 94
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF +SED +R F FG+++ VNL+ D+ R RGF F+ +E +R AI G
Sbjct: 4 KLYVGNLSFNSSEDDIRTQFSNFGEVISVNLITDRETGRLRGFGFVEM-DDEGARAAIAG 62
Query: 139 MHGK 142
M G+
Sbjct: 63 MDGQ 66
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL + F +GQ+ EV ++ D+ R RGF F+ + +E++ A
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MLAMNGK 69
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ +G + E +V D+ NR RGF F+R+A++ E+ A+
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 138 GM 139
M
Sbjct: 62 AM 63
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + SL+ AF +G++VE ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQ 60
Query: 131 ESRRAIEGMHGKV 143
R AI+ M+GK+
Sbjct: 61 SMRDAIDAMNGKM 73
>gi|375144998|ref|YP_005007439.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361059044|gb|AEV98035.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 82
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++VS LSF D LR F +G++ VN+++DK+ NR RGFAF+ + + +AI +
Sbjct: 3 IYVSNLSFSVQNDDLRKHFSEYGEVDSVNVIIDKVTNRSRGFAFIEMKDNQAAEKAIREL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 45/65 (69%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS+ T+E +L++AF G +++V ++ + + +G+ F+++A+E+E+ A+
Sbjct: 125 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 184
Query: 139 MHGKV 143
M G+V
Sbjct: 185 MGGEV 189
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGK 142
M GK
Sbjct: 69 MSGK 72
>gi|225562488|gb|EEH10767.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325092417|gb|EGC45727.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 136
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ +G + E +V D+ NR RGF F+R+A++ E+ A+
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 138 GM 139
M
Sbjct: 62 AM 63
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T+ ++L AF FGQ+++ ++ D+ R RGF F+ +++E+
Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 SMLDAIENMNGK 72
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL NAF+ FG++++ ++ D+ R RGF F+ + TE+ + AI
Sbjct: 5 RCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAINA 64
Query: 139 MHGK 142
M+GK
Sbjct: 65 MNGK 68
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 68 PHSLSTCQ-----PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
P +LS Q +++FV GLS+ T + L AF +G++VE ++MD+ R RGF
Sbjct: 25 PSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFG 84
Query: 123 FLRYATEEESRRAIEGMHGK 142
F+ + E++ AI+ + G+
Sbjct: 85 FVTFGASEDASSAIQALDGQ 104
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 68 PHSLSTCQ-----PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
P +LS Q +++FV GLS+ T + L AF +G++VE ++MD+ R RGF
Sbjct: 25 PSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFG 84
Query: 123 FLRYATEEESRRAIEGMHGK 142
F+ + E++ AI+ + G+
Sbjct: 85 FVTFGASEDASSAIQALDGQ 104
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 2 AVLGFLPVPTTYFNINQNLLIHNLTRHSPAPATPFTIKRRD------FDSLFSLRQGRGR 55
+G LP P +F +Q + ++PA +PF + F SL +GR R
Sbjct: 57 GAVGSLPGPARHFTCSQRQV---ELLNAPAQNSPFCYTEGEGRLADTFVSLLLSARGRRR 113
Query: 56 GACFPLACLPPS-PHSLSTCQPKT--RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMD 112
+ ++ P S S +P+ +LF+ GLSF T+++SLR+ F+ +G L + ++ D
Sbjct: 114 RSIVKVSLHPAVMSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 173
Query: 113 KIANRPRGFAFLRYATEEESRRAIEGMHGKV 143
R RGF F+ YAT EE A+ KV
Sbjct: 174 PNTKRSRGFGFVTYATVEEVDAAMNARPHKV 204
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
++FV G+ T E LR+ F+ +G++ + ++ D+ + + RGFAF+ +
Sbjct: 231 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 278
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV LS+ T+ED +R F+ +G L EVNL +DK+ +P+GF + + E + +A
Sbjct: 351 RMFVRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDKVTRKPKGFGTITFLMPEHAVKAYSE 410
Query: 139 MHGKV 143
+ G +
Sbjct: 411 LDGSI 415
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-----RGFAFLRYATEE 130
P T LFV ++F T+E+ L + F G L ++ K P G+ F+RY +
Sbjct: 661 PDTTLFVKNINFATTEEQLHSYFSKCGPLSYASIATKKDVKNPGGKLSMGYGFVRYKRKA 720
Query: 131 ESRRAIE 137
++ RA++
Sbjct: 721 DADRALK 727
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GLS+ T ++ LR F+ FG + E +V D+ R RGF F+RYA + ++ AI
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIA 61
Query: 138 GMHGK 142
M G+
Sbjct: 62 NMDGQ 66
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T + +L+ AF +G++++ ++ D+ R RGF F+ + +EE R
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 134 RAIEGMHGK 142
+AIE M+GK
Sbjct: 62 QAIEEMNGK 70
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 47/64 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E LR+AF +G+++EV +++++ + +GF F+++A+E ++ A++
Sbjct: 36 KLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNALKE 95
Query: 139 MHGK 142
M G+
Sbjct: 96 MDGQ 99
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G++VE ++ D+ R RGF F+ ++ E+
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEK 60
Query: 131 ESRRAIEGMHGK 142
AIEGM+G+
Sbjct: 61 SMNDAIEGMNGQ 72
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T + +L+ AF +G++++ ++ D+ R RGF F+ + +EE R
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 134 RAIEGMHGK 142
+AIE M+GK
Sbjct: 62 QAIEEMNGK 70
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L QG + A L P +T P LFV+ L++ T
Sbjct: 92 PVPTCETKAEKKDRIRKLKLEQGADKVAK-ELQNYNPQSDPNTTSDPYKTLFVARLNYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
SE ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+
Sbjct: 151 SESRVKREFEAYGPIKRVRLVTDKDTNKPRGYAFIEYMHTRDMKNAYKQADGR 203
>gi|72387121|ref|XP_843985.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175981|gb|AAX70104.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70800517|gb|AAZ10426.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 386
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
P LP S + + CQ KT L V LS R E L+ F +G+++ ++ +
Sbjct: 29 PFVKLPESKLTPNECQSKTNLIVRNLSNRVDEAVLKQIFSPYGEILSAAVMRNIHTGDSL 88
Query: 120 GFAFLRYATEEESRRAIEGMHGKVCC 145
G AF+R+AT E++R A+ G HG+V C
Sbjct: 89 GTAFVRFATTEQARAALVGCHGRVVC 114
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS+ ++ L++ F +G +V ++MD+ R +GF F+ T++E++ AI G
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAITG 100
Query: 139 MHGKVC 144
MHG+V
Sbjct: 101 MHGQVI 106
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MDK N+ RGF F+
Sbjct: 138 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKKTNKRRGFCFI 197
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 198 TFKEEEPVKKIMEKKYHNV 216
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 53 PRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 112
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 113 LFKESESVDKVMDQKEHKLNGKV 135
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 44/63 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+++V LS+ T++D+LR AF +GQ+V+ ++ D+ R RGF F+ +++E+E+ AI
Sbjct: 3 TKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAIN 62
Query: 138 GMH 140
+H
Sbjct: 63 SLH 65
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+ V+ L + SE +R AF+ FG++ EV+L +DK++ + +GFAF+ Y +++ +A
Sbjct: 214 RILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNE 273
Query: 139 MHGKV 143
M G+V
Sbjct: 274 MDGQV 278
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ V GL +E +++ AFQ FG + + LV K R FAFL ++TE E++ AIE
Sbjct: 2 SRIIVKGLPHVATEKTIKEAFQSFGNITDCKLVRTK-EGVSREFAFLGFSTESEAQNAIE 60
Query: 138 GMH 140
M+
Sbjct: 61 KMN 63
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
T+L V L F T+ + +R F+ +G L V V KI + +G+AF+ YAT++E
Sbjct: 604 TKLLVKNLPFETNLNEVRELFRVYGTLRGVR-VPKKIDGQLKGYAFIEYATKQE 656
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GLS+ T ++SLR F+ FG + + +V D+ R RGF F+R++T+EE+ A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMN 61
Query: 138 GMHGK 142
M+ +
Sbjct: 62 AMNNQ 66
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 58 CFPLACLPPS-PHS----LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMD 112
P LP S P S + + +LFV GLSF T+E SL F +GQ+ EV +V D
Sbjct: 12 SLPGPSLPDSRPRSCLWKAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKD 71
Query: 113 KIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+ R RGF F+ + ++++ A+ M+GK
Sbjct: 72 RETQRSRGFGFVTFENIDDAKDAMMAMNGK 101
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ R+FV GLS+ +E L NAF FG++VE +++++ RPRGF F+ +A AI
Sbjct: 2 ENRIFVGGLSWDITERQLENAFDRFGKIVECQVMLERDTGRPRGFGFITFADRRAMDDAI 61
Query: 137 EGMHGK 142
MHG+
Sbjct: 62 REMHGR 67
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P + LF+ LSF SED + NAF G++ V L D + RP+GF ++ +A +E ++ A
Sbjct: 310 PSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 369
Query: 136 IEGMHGK 142
I+ M G+
Sbjct: 370 IDAMTGQ 376
>gi|320586919|gb|EFW99582.1| glycine-rich RNA-binding protein [Grosmannia clavigera kw1407]
Length = 462
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RYA E ++ AI
Sbjct: 283 AKLFIGGLAWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYANEADAETAIA 342
Query: 138 GMH 140
M+
Sbjct: 343 SMN 345
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL + F +GQ+ EV ++ D+ R RGF F+ + +E++ A
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MLAMNGK 69
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 75 QPKTRLFVSGLSFR-TSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +T L+V+ L R +ED L N F G +V++NL+ DKI PRG AF+R+ EE+
Sbjct: 110 RKETNLYVTNLPSRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEAL 169
Query: 134 RAIEGMHGKV 143
AIE ++G +
Sbjct: 170 AAIEHLNGTI 179
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Query: 137 EGMHGK 142
M+GK
Sbjct: 65 MAMNGK 70
>gi|392412892|ref|YP_006449499.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390626028|gb|AFM27235.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 109
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LSF+TSED L+ F+ FGQ+ ++ DK RPRGF F++ EE +AI+ +
Sbjct: 6 IYVGNLSFQTSEDQLKELFESFGQVESATIISDKTTGRPRGFGFVKMPEREEGLKAIQEL 65
Query: 140 HGK 142
+
Sbjct: 66 DAR 68
>gi|375144786|ref|YP_005007227.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361058832|gb|AEV97823.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 102
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L+VS L F+ ++D L F +GQ+ ++MD+ R RGF F+ +++EE+R+AI+ +
Sbjct: 3 LYVSNLGFQVNDDDLAKLFSQYGQVSSAKVIMDRETGRSRGFGFVEMSSDEEARKAIKEL 62
Query: 140 HGK 142
GK
Sbjct: 63 EGK 65
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++++LR F FG + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 138 GMHGK 142
M+ +
Sbjct: 62 EMNNQ 66
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E+SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
K R FV GL++ T + SL AF +G++++ ++ D+ R GF F+ +++E+ R AI
Sbjct: 7 KYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAI 66
Query: 137 EGMHGK 142
EGM+GK
Sbjct: 67 EGMNGK 72
>gi|261327112|emb|CBH10088.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 426
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
P LP S + + CQ KT L V LS R E L+ F +G+++ ++ +
Sbjct: 69 PFVKLPESKLTPNECQSKTNLIVRNLSNRVDEAVLKQIFSPYGEILSAAVMRNIHTGDSL 128
Query: 120 GFAFLRYATEEESRRAIEGMHGKVCC 145
G AF+R+AT E++R A+ G HG+V C
Sbjct: 129 GTAFVRFATTEQARAALVGCHGRVVC 154
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV GL++ TS+ LR+ F+ FG+L E +V+DK + R RGF F+ Y ++
Sbjct: 4 EDEYRCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKVMED 63
Query: 135 AIEGMHG 141
AI+ M+G
Sbjct: 64 AIDAMNG 70
>gi|115459706|ref|NP_001053453.1| Os04g0543200 [Oryza sativa Japonica Group]
gi|38345947|emb|CAE04271.2| OSJNBb0103I08.18 [Oryza sativa Japonica Group]
gi|38345949|emb|CAE04337.2| OSJNBb0038F03.1 [Oryza sativa Japonica Group]
gi|113565024|dbj|BAF15367.1| Os04g0543200 [Oryza sativa Japonica Group]
gi|215678877|dbj|BAG95314.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717042|dbj|BAG95405.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 774
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE-- 137
+FV GL +E LR F G++ EV L+M+ + + +GFAFLRYAT E++RRA+
Sbjct: 192 VFVGGLDKDATESDLRKVFGEVGEITEVRLMMNPVTKKNKGFAFLRYATVEQARRAVSEL 251
Query: 138 ---GMHGKVC 144
+ GK C
Sbjct: 252 KNPSVRGKQC 261
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 45/66 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS+ T+E +L++AF G +++V ++ + + +G+ F+++A+E+E+ A+
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 139 MHGKVC 144
M G+V
Sbjct: 98 MGGEVI 103
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 139 MHGK 142
M+GK
Sbjct: 79 MNGK 82
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV LS+ +ED LR F G GQ+ EV ++ D+ R RGFAF+ +++E E+ AIE
Sbjct: 5 KVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIEN 64
Query: 139 MH 140
++
Sbjct: 65 LN 66
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 9 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 68
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 69 DAMMAMNGK 77
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Query: 137 EGMHGK 142
M+GK
Sbjct: 65 MAMNGK 70
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|46106940|ref|XP_380618.1| hypothetical protein FG00442.1 [Gibberella zeae PH-1]
Length = 206
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E +++ AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIA 61
Query: 138 GMHGKVCCCFW 148
M+ W
Sbjct: 62 AMNNVEYESLW 72
>gi|357165062|ref|XP_003580257.1| PREDICTED: uncharacterized protein LOC100827844 [Brachypodium
distachyon]
Length = 783
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV GL +E LR F G++ EV L+M+ + + +GFAFLRYAT E++RRA+ +
Sbjct: 201 VFVGGLDKDATESDLRKVFSEVGEISEVRLMMNPVTKKNKGFAFLRYATVEQARRAVSDL 260
Query: 140 -----HGKVC 144
GK C
Sbjct: 261 KNPLVRGKQC 270
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ SL+ AF +G++++ ++ D+ R RGF F+ + E+ R
Sbjct: 3 AEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMR 62
Query: 134 RAIEGMHGK 142
AI+GM+G+
Sbjct: 63 DAIDGMNGQ 71
>gi|302765773|ref|XP_002966307.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
gi|300165727|gb|EFJ32334.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
Length = 289
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
T +T ++V GL++ +ED +R+ F+ FG++ +V ++ D + RG+ F+ +AT E +
Sbjct: 2 TVSDQTSVYVGGLAYDVTEDLIRSTFEEFGEIDKVKIIQDHDG-QSRGYGFITFATSEAA 60
Query: 133 RRAIEGMHGKVCC 145
AI GM+GKV
Sbjct: 61 NGAIYGMNGKVVA 73
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+L+V + F SED LR F+ FG+++ + L D R RGF F++Y E++++A E
Sbjct: 306 TKLYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFGFVQYKNHEDAKKAFE 365
Query: 138 GMHG 141
++G
Sbjct: 366 QLNG 369
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++++LR F FG + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 138 GMHGK 142
M+ +
Sbjct: 62 EMNNQ 66
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++L+V LSF+T+E+ LR+AF FG + +V + MDK+ RPRGFAF+ T
Sbjct: 4 SKLYVGNLSFKTTEEELRSAFGQFGSVTDVYVAMDKMTGRPRGFAFVTMGT 54
>gi|388580169|gb|EIM20486.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 335
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A S L + + ++F+ GL++ T EDSLRN F FG +V++N++ D NR RG
Sbjct: 27 IATHSASEEPLDQDEAQRKIFIGGLNWDTDEDSLRNYFSKFGNVVQLNIMRDPNTNRSRG 86
Query: 121 FAFLRY 126
F FL +
Sbjct: 87 FGFLTF 92
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQG-FGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++FV G+ + + F+ FGQ+ + NL+ DK R RGF FL + TE+++ A++
Sbjct: 129 KIFVGGIPLTMPVEQVVENFESVFGQVTDANLMYDKETGRSRGFGFLTFETEQQAEDAVK 188
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 45/66 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS+ T+E +L++AF G +++V ++ + + +G+ F+++A+E+E+ A+
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 139 MHGKVC 144
M G+V
Sbjct: 98 MGGEVI 103
>gi|297833586|ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
gi|297330515|gb|EFH60934.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS E SL++AF FG++ EV + DK + R RGF F+ +A E ++ A +
Sbjct: 41 KLFIGGLSCSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 100
Query: 139 MHGK 142
M GK
Sbjct: 101 MDGK 104
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 44/63 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GL++ T++++LR F+ +G + E +V D+ NR RGF F+R+A++ E+ A+
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 44/63 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GL++ T++++LR F+ +G + E +V D+ NR RGF F+R+A++ E+ A+
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|260803001|ref|XP_002596380.1| hypothetical protein BRAFLDRAFT_215468 [Branchiostoma floridae]
gi|229281635|gb|EEN52392.1| hypothetical protein BRAFLDRAFT_215468 [Branchiostoma floridae]
Length = 85
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+T+L+V GL FR +ED + AF GQ+V+ L+ D+ + RGFAF+ ++ E+ + RA
Sbjct: 3 DRTKLYVGGLDFRMTEDDVYTAFSDHGQIVDCKLITDRETGKSRGFAFVTFSDEDSAARA 62
>gi|310793386|gb|EFQ28847.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 171
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY + ++++AI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAIS 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|222629297|gb|EEE61429.1| hypothetical protein OsJ_15642 [Oryza sativa Japonica Group]
Length = 730
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+FV GL +E LR F G++ EV L+M+ + + +GFAFLRYAT E++RRA+
Sbjct: 137 VFVGGLDKDATESDLRKVFGEVGEITEVRLMMNPVTKKNKGFAFLRYATVEQARRAV 193
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 20 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 79
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 80 DDAKKALEQLNG 91
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|403283527|ref|XP_003933170.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Saimiri boliviensis boliviensis]
Length = 299
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 70 SLSTCQPKT--RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
S S+ +P+ +LF+ GLSF T+++SLR+ F+ +G L + ++ D R RGF F+RYA
Sbjct: 4 SESSKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFIRYA 63
Query: 128 TEEESRRAIEG----MHGKVC 144
T EE A+ +HG+V
Sbjct: 64 TAEEVDAAMNARPHKVHGRVV 84
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 32/52 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++F+ G+ T E LR+ F+ +G++ + ++ D+ + + RGFAF+ + +
Sbjct: 106 KIFLGGIKEDTEEHHLRDYFEQYGKIEVIEIITDRGSGKKRGFAFVAFDDHD 157
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T+ ++L +AF FGQ+++ ++ D+ R RGF F+ +++E+
Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 SMLDAIENMNGK 72
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E +++ AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQENDAQNAIA 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|351709446|gb|EHB12365.1| Heterogeneous nuclear ribonucleoprotein D0 [Heterocephalus glaber]
Length = 271
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+++R F GFG++ + L MD N+ RGF F+
Sbjct: 179 PKRAKAMKTKEPVKKIFVGGLSPDTPEENIREYFGGFGEVESIELPMDNKTNKRRGFCFI 238
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 239 TFKEEEPVKKIMEKKYHNV 257
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE- 137
++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ E + ++
Sbjct: 108 KMFMGGLSWDTTKKDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESESVDKVMDQ 167
Query: 138 ---GMHGKV 143
++GKV
Sbjct: 168 KEHKLNGKV 176
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ L+ AF+ FG LVE +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKA 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|225448932|ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GLS+ +E L N F FG+++E +++++ RPRGF F+ YA
Sbjct: 4 KEENRIFVGGLSWDVTERQLENTFSRFGKIIESQIMLERDTGRPRGFGFITYADRRGMED 63
Query: 135 AIEGMHGK 142
AI MHG+
Sbjct: 64 AIREMHGR 71
>gi|168021263|ref|XP_001763161.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685644|gb|EDQ72038.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q + +L++ GLS+ T+ D+L N F +G++ E + DK N+ RGFAF+ + + E ++R
Sbjct: 141 QAQRKLYIGGLSYDTTSDTLLNIFSQYGEIEEGAIAYDKNTNKSRGFAFVTFKSIEGAKR 200
Query: 135 AIE 137
AIE
Sbjct: 201 AIE 203
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 56 GACFPLACLPPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
G+ FP + +++ P R LFV GL++ TS +LR AF+ +G++ E ++ DK
Sbjct: 32 GSLFP--AVADDIRDIASKDPVHRKLFVRGLAWETSSMALREAFEQYGEVEEACVITDKG 89
Query: 115 ANRPRGFAFLRYATEEESRRAI----EGMHGKVCCC 146
+ RGF F+ + + + RA+ + + G++ C
Sbjct: 90 TGKSRGFGFITFKHMDSAHRALKEPSKNIDGRITVC 125
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LF+ GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P+ R F+ GL++ TS+ LR+AF+ +G L+E +V+DK + R RGF F+ + ++
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 135 AIEGMHG 141
AI M+G
Sbjct: 64 AIAAMNG 70
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R F+ LS+ TS+ L++AF+ FG LV+ +V+DK + R RGF F+ + +
Sbjct: 4 EDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMED 63
Query: 135 AIEGMHG 141
AIE M+G
Sbjct: 64 AIEAMNG 70
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 56 GACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA 115
G P+A PP P S + +LFV LSFRT +LR AF+ FG++V ++ ++
Sbjct: 8 GVPAPVAEAPPRPTSPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRET 67
Query: 116 NRPRGFAFLRYATEEESRRAIEGM 139
+ RGF F+ Y + E+ AI M
Sbjct: 68 GQSRGFGFVVYEQKHEADAAISRM 91
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLS+ T+E SL AF +G + +V+++ D+ +R RGF F+ + E+++ A
Sbjct: 3 DEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MAAMNGK 69
>gi|302829787|ref|XP_002946460.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
gi|300268206|gb|EFJ52387.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
Length = 186
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
PKT L+V GL +E +L AF FG++ EVN+ +D RGF F+ Y +E++
Sbjct: 14 TNPKTTLYVGGLEETVNEATLHAAFLPFGEIKEVNIPLDHATGTHRGFGFVEYEEKEDAA 73
Query: 134 RAIEGMH 140
AI+ MH
Sbjct: 74 AAIDNMH 80
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GLS+ T ++ LR F+ FG + E +V D+ R RGF F+RY + ++ AI
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIA 61
Query: 138 GMHGK 142
M G+
Sbjct: 62 NMDGQ 66
>gi|427779523|gb|JAA55213.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 476
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P +S T P LFV+ +++ TSE LR F+ FG + ++ +V +KI +PRG
Sbjct: 85 IALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGK 142
+AF+ Y E + A + GK
Sbjct: 145 YAFVEYEHERDMHSAYKHADGK 166
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ GL + + LR AF FG++ E ++ D+ R RGF F+ Y+ + ++ AI
Sbjct: 37 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 96
Query: 138 GMHGK 142
M GK
Sbjct: 97 AMDGK 101
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 63 CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
P + ++++ + K LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF
Sbjct: 20 VTPEAQAAMASDEGK--LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFG 77
Query: 123 FLRYATEEESRRAIEGMHGK 142
F+ + ++++ A+ M+GK
Sbjct: 78 FVTFENIDDAKDAMMAMNGK 97
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +E+ LR F+ FG++ + L+MD NR +G+ F+ Y
Sbjct: 357 QPKSHVGPMRLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNA 416
Query: 130 EESRRAIEGMHG 141
E++++A+E ++G
Sbjct: 417 EDAKKALEQLNG 428
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 64 MMAMNGK 70
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L +AF +G++++ ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 134 RAIEGMHGK 142
AIEGM+G+
Sbjct: 62 DAIEGMNGQ 70
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GLS+ +E L NAF FG++VE +++++ RPRGF F+ +A
Sbjct: 4 KEENRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRAMDD 63
Query: 135 AIEGMHGK 142
AI MHG+
Sbjct: 64 AIREMHGR 71
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV LS+ +ED LR F G GQ+ EV ++ D+ R RGFAF+ +++E E+ AIE
Sbjct: 5 KVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIEN 64
Query: 139 MH 140
++
Sbjct: 65 LN 66
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|443708578|gb|ELU03655.1| hypothetical protein CAPTEDRAFT_219142 [Capitella teleta]
Length = 774
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVM--DKIANRPRGFAFLRYATEEESRRA 135
+R+ V LSF+ +ED LR FQ FG+++EV + + DK N +GFAF+++ T EE++ A
Sbjct: 149 SRIIVRNLSFKCTEDILREKFQKFGKILEVKIPLKGDKAKNTMKGFAFVQFETVEEAQAA 208
Query: 136 IE 137
+E
Sbjct: 209 LE 210
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
LFV LSF + E+ + F G +V + M+K + RG F++Y+++E++ + +E
Sbjct: 377 LFVRNLSFESEEEDMYELFSELGDVVYCRITMNKETGKSRGTGFVQYSSKEDADKCLE 434
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 235 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 294
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 295 TFKEEEPVKKIMEKKYHNV 313
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 150 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 209
Query: 125 RYATEEESRRAIE----GMHGKVC 144
+ E + ++ ++GKV
Sbjct: 210 LFKESESVDKVMDQKEHKLNGKVI 233
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+RYA + E+ A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQ 61
Query: 138 GMH 140
++
Sbjct: 62 ALN 64
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T +FVS LSF T+E+ ++ F FG + E L+ D R +GF F++Y+++ E+ +A++
Sbjct: 21 TEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAVK 80
Query: 138 GMHGKV 143
M GK+
Sbjct: 81 AMDGKI 86
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ GL + + LR AF FG++ E ++ D+ R RGF F+ Y+ + ++ AI
Sbjct: 37 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 96
Query: 138 GMHGK 142
M GK
Sbjct: 97 AMDGK 101
>gi|193211762|ref|YP_001997715.1| RNP-1 like RNA-binding protein [Chlorobaculum parvum NCIB 8327]
gi|193085239|gb|ACF10515.1| RNP-1 like RNA-binding protein [Chlorobaculum parvum NCIB 8327]
Length = 90
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L + SED LR+AF FGQ+ N++ DK + R +GF F+ + E+R AI+ M
Sbjct: 3 IYIGNLPYSVSEDDLRDAFSEFGQVHSANIITDKFSGRSKGFGFVDMPNDGEAREAIDAM 62
Query: 140 HGK 142
+ K
Sbjct: 63 NDK 65
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L +AF FG++++ ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 134 RAIEGMHGK 142
AIEGM G+
Sbjct: 62 DAIEGMKGQ 70
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P +RLF+ G+S+ SL +GQ+V+ ++MD+ R RGF F+ Y+ +E+ RA
Sbjct: 40 PNSRLFIGGVSYSIDAQSLGEICSQYGQVVDARIIMDRETGRHRGFGFITYSNVDEASRA 99
Query: 136 IEGMHGK 142
++ + G+
Sbjct: 100 LQALDGQ 106
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 23 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 82
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 83 DAMMAMNGK 91
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GLS+ T + SL AF FG++ + ++ D+ R RGF F+ +A E+ R
Sbjct: 2 AEVEYRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMR 61
Query: 134 RAIEGMHGK 142
AI+ M+GK
Sbjct: 62 DAIDEMNGK 70
>gi|157140206|ref|XP_001647625.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108866540|gb|EAT32293.1| AAEL015585-PA [Aedes aegypti]
Length = 176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ + +T P LFV+ +++ TSE LR F+ +G++V++ ++ DK +PRG
Sbjct: 85 IATWDPNQLAEATQDPFKTLFVARINYDTSESKLRREFETYGKIVKIIIIHDKETGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKVC 144
+AF+ Y E + MH K C
Sbjct: 145 YAFIEYEHERD-------MHCKYC 161
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV L + T+E+ L FQ +G + EV+LV+DK R +G A++ Y E ++RA+E
Sbjct: 292 RLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEE 351
Query: 139 MHGKV 143
+ +
Sbjct: 352 LDNSI 356
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q T+L V ++F + LR F +GQ+ + L M + RGFAF+ + T++E++
Sbjct: 703 QSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMK--FGKHRGFAFVEFVTKQEAQN 760
Query: 135 AIEGM 139
A + +
Sbjct: 761 AFQAL 765
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV L + T+E+ L FQ +G + EV+LV+DK R +G A++ Y E ++RA+E
Sbjct: 292 RLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEE 351
Query: 139 MHGKV 143
+ +
Sbjct: 352 LDNSI 356
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q T+L V ++F + LR F +GQ+ + L M + RGFAF+ + T++E++
Sbjct: 700 QSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMK--FGKHRGFAFVEFVTKQEAQN 757
Query: 135 AIEGM 139
A + +
Sbjct: 758 AFQAL 762
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GL + TSE L +AF +G+++E ++M++ RPRGF F+ +A
Sbjct: 4 REENRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMED 63
Query: 135 AIEGMHGK 142
AI MHG+
Sbjct: 64 AIREMHGR 71
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++ F+ FG+L+E +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDA 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|239904808|ref|YP_002951546.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
gi|239794671|dbj|BAH73660.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
Length = 94
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF ++ED +R F +G+++ VNL+ D+ R RGF F+ +E +R AI G
Sbjct: 4 KLYVGNLSFNSTEDDIRTQFSNYGEVISVNLITDRETGRLRGFGFVEM-DDEGARAAIAG 62
Query: 139 MHGK 142
M G+
Sbjct: 63 MDGQ 66
>gi|116781130|gb|ABK21976.1| unknown [Picea sitchensis]
Length = 219
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV GL +E+ LR F G++VE+ L+M+ + +GFAF+RYAT E+++RA +
Sbjct: 37 VFVGGLDKDAAEEDLRKVFSEVGEVVEIRLMMNAQTQKNKGFAFIRYATVEQAKRACTEL 96
Query: 140 -----HGKVC 144
+GKVC
Sbjct: 97 KNPQVNGKVC 106
>gi|390600853|gb|EIN10247.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 329
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V GLS RT E L + F FGQ+ +V +V D+ + R RGF F++ AT E++ +AIE +
Sbjct: 77 LGVFGLSIRTQERDLDDEFSRFGQVEKVTIVYDQRSGRSRGFGFIKMATVEDATKAIENL 136
Query: 140 HG 141
+G
Sbjct: 137 NG 138
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+R+ E ++ AI+
Sbjct: 2 SKLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQ 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+ P +T +P LFVS LSF T+E +L++ F+ FG++ V++V D +PRG
Sbjct: 83 IDAWDPHKDENATAEPYKTLFVSRLSFDTTEKTLKHEFEAFGEVKSVSIVKDLKTGKPRG 142
Query: 121 FAFLRYATEEESRRAIEGMHG 141
+AF+ + E + + A + G
Sbjct: 143 YAFIEFEHERDMKIAYKDAEG 163
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ T++ SL AF+ +G ++E +V D+ NR RGF F+ + EE AI
Sbjct: 6 RCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRK 65
Query: 139 MHGK 142
MH +
Sbjct: 66 MHNQ 69
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV LS+ +ED + F+ FG + EV+L +DKI +P+GFAF+ + E + +A
Sbjct: 325 RIFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKAFSE 384
Query: 139 MHGKV 143
+ GK+
Sbjct: 385 LDGKL 389
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-----RGFAFLRYATEEES 132
T LFV L+F T+ED+LR F G G + EV + K P G+ F+++ ++ +
Sbjct: 632 TTLFVKNLNFSTTEDALREHFAGCGPIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSA 691
Query: 133 RRAIEGM-HGKV 143
++A++ + H K+
Sbjct: 692 KKALKQLQHSKL 703
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIAN--RPRGFAFLRYATEEESRRA 135
T++ V + F ++ L+ F FG L ++ L K+A R RGFAF+ + T+ +++RA
Sbjct: 737 TKILVRNIPFEATKKELQELFSVFGTLRDIRLP-KKMAGTGRHRGFAFVDFLTKNDAKRA 795
Query: 136 IEGM 139
+ +
Sbjct: 796 FQAL 799
>gi|381206512|ref|ZP_09913583.1| RNA-binding protein [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 85
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L+F SED LR+AF FG++ + +++MD++ NR +GF F+ E A+E +
Sbjct: 3 IYVGNLAFSVSEDQLRSAFSQFGKVSKASVIMDRVNNRSKGFGFVEMDDAAEGNSAVEAL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|361128698|gb|EHL00628.1| putative Cold-inducible RNA-binding protein [Glarea lozoyensis
74030]
Length = 170
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E++LR F+ FG + E +V D+ R RGF F+RY E ++ AI
Sbjct: 2 SKLFIGGLAWHTDENALRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQESDAEAAIT 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GLS+ T ++SLR F+ FG + + +V D+ R RGF F+R++T++E+ A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMN 61
Query: 138 GMHGK 142
M+ +
Sbjct: 62 AMNNQ 66
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 45/63 (71%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ +G + E +V D+ NR RGF F+R++++ E+ A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|327272896|ref|XP_003221220.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Anolis
carolinensis]
Length = 311
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F GFG++ + L MD N RGF F+
Sbjct: 112 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGGFGEIENIELPMDTKTNERRGFCFI 171
Query: 125 RYATEEESRRAIEGMHGKV 143
Y+ EE ++ +E + ++
Sbjct: 172 TYSDEEPVKKLLESRYHQI 190
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 37 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEK 96
Query: 135 AIE 137
+E
Sbjct: 97 VLE 99
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T++D LR F +G + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 138 GMHGK 142
M+ +
Sbjct: 62 AMNNQ 66
>gi|66826459|ref|XP_646584.1| hypothetical protein DDB_G0270156 [Dictyostelium discoideum AX4]
gi|60474491|gb|EAL72428.1| hypothetical protein DDB_G0270156 [Dictyostelium discoideum AX4]
Length = 900
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
LF+ L+F T E+ L F+ +G+LV LV+DK+ +P G AF++Y ++++RRA+E
Sbjct: 405 LFIRNLAFDTKEEDLGAKFEEYGKLVFCRLVLDKLTQKPTGKAFVKYHEQDDARRAVEA 463
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
L + LSF T+ L F +GQL+ V + N PRGFAFL + E S + ++
Sbjct: 213 LIIRNLSFNTNIQFLVEKFSSYGQLILVKVPTKPGTNTPRGFAFLTFKERESSEKVLK 270
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T + SL +AF FG+++E +V D+ R RGF F+ ++ E+
Sbjct: 1 MASAEIEFRCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQ 60
Query: 131 ESRRAIEGMHGK 142
AIE M+GK
Sbjct: 61 AMMDAIEAMNGK 72
>gi|297807131|ref|XP_002871449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317286|gb|EFH47708.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 745
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RLFV GL + T+E+ L F FG + EV+LV+DK RG A++ Y E ++RA+E
Sbjct: 240 SRLFVHGLPYSTAEEELTEHFSKFGDISEVHLVLDKDTRNSRGMAYVLYLIPESAKRAME 299
Query: 138 GM 139
+
Sbjct: 300 KL 301
>gi|261188230|ref|XP_002620531.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239593278|gb|EEQ75859.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239609317|gb|EEQ86304.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ER-3]
gi|327354414|gb|EGE83271.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ATCC
18188]
Length = 825
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPH--------SLSTCQPKTRLF 81
P+ A I+ + S R+G + A P+ PP+P ++ + RLF
Sbjct: 241 PSTAQIREIEESEDSDYESTRRGNAQEASPPVQKEPPNPSDKNESFDANIGQLRETGRLF 300
Query: 82 VSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHG 141
V L + SE L + F FG++ EV++ D ++ +GFA+++YA E + +A + + G
Sbjct: 301 VRNLLYNASESDLESLFSPFGKIDEVHVAFDTRHSKSKGFAYVQYADPEAAIQAFKTLDG 360
Query: 142 KV 143
KV
Sbjct: 361 KV 362
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++ + L F+ ++ +RN F +G+L V V K RGFAF + + E+ A++
Sbjct: 702 TKILIKNLPFQATKKDIRNLFSAYGKLRSVR-VPQKFDGTARGFAFADFVSAREAENAMD 760
Query: 138 GM 139
+
Sbjct: 761 AL 762
>gi|257043450|gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
Length = 140
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 56 GACFPLACLPPSPHSLST------CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNL 109
G + P S+++ C ++LF+ GLS+ T + SL++AF FG + E +
Sbjct: 7 GNLLKQKAVTAGPMSMTSMMNSIRCMSSSKLFIGGLSWGTDDQSLKDAFASFGDVTEARV 66
Query: 110 VMDKIANRPRGFAFLRYATEE 130
+MD+ + RGF F+ Y E
Sbjct: 67 IMDRNTGKSRGFGFVEYNDTE 87
>gi|406985531|gb|EKE06283.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 83
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ LS+ + D LR F FG +++ ++MD++ R RGF F+ TEE++ +A+EG
Sbjct: 3 KLFIGNLSWEVTSDDLRAFFASFGTVIDAVVIMDRMTGRSRGFGFVEMETEEQANKALEG 62
Query: 139 MHGK 142
+GK
Sbjct: 63 -NGK 65
>gi|195456590|ref|XP_002075201.1| GK16696 [Drosophila willistoni]
gi|194171286|gb|EDW86187.1| GK16696 [Drosophila willistoni]
Length = 508
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V LS +++ L F FGQ+V+ N++ DK+ RPRG AF+RY EE++ AI+
Sbjct: 198 TNLYVINLSRNINDEMLDRIFSPFGQIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 257
Query: 138 GMHGKV 143
++ +
Sbjct: 258 SLNNTI 263
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LSF +D L F FG + VN++ D+ R +GFAF+ +TE E+R AIE
Sbjct: 4 KIYVGNLSFNVDQDQLNQVFAEFGTVDTVNVITDRETGRSKGFAFVEMSTETEARAAIEK 63
Query: 139 MHG 141
++G
Sbjct: 64 LNG 66
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|449486950|ref|XP_004157451.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 163
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++FV GLS+ + + +LR AF +G++VE +VMD R +GF F+ ++ +EE+ AI+
Sbjct: 70 SKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIK 129
Query: 138 GMHGK 142
+ GK
Sbjct: 130 ALDGK 134
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G++VE ++ D+ R RGF F+ +A+E+
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQ 60
Query: 131 ESRRAIEGMHGK 142
+ AI M+G+
Sbjct: 61 SMKDAIGAMNGQ 72
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 262 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 321
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 322 TFKEEEPVKKIMEKKYHNV 340
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE- 137
++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E + ++
Sbjct: 191 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 250
Query: 138 ---GMHGKV 143
++GKV
Sbjct: 251 KEHKLNGKV 259
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++AF+ FG+L E +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDA 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|403341233|gb|EJY69916.1| RNA binding domain-containing protein 28 [Oxytricha trifallax]
Length = 732
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q + ++ V + F E L+ FQ FG +V VN+ + N RGF F+ ++T+EE+++
Sbjct: 27 QKEGKVIVRNIQFDLKEPHLKKEFQKFGTIVAVNVPIKNENNLNRGFGFIEFSTKEEAQK 86
Query: 135 AIEGMHGK 142
AI+GM+G+
Sbjct: 87 AIDGMNGQ 94
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|224109676|ref|XP_002315274.1| predicted protein [Populus trichocarpa]
gi|118481097|gb|ABK92502.1| unknown [Populus trichocarpa]
gi|222864314|gb|EEF01445.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 41/60 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T +D++R F+ +G+++E ++ DKI R +G+ F+ + E +++A E
Sbjct: 17 TKVFVGGLAWETPKDAMREHFEKYGEILEAVIISDKITGRSKGYGFVTFKEAESAKKACE 76
>gi|303328239|ref|ZP_07358677.1| RNA-binding protein [Desulfovibrio sp. 3_1_syn3]
gi|345893613|ref|ZP_08844407.1| hypothetical protein HMPREF1022_03067 [Desulfovibrio sp.
6_1_46AFAA]
gi|302861569|gb|EFL84505.1| RNA-binding protein [Desulfovibrio sp. 3_1_syn3]
gi|345046026|gb|EGW49923.1| hypothetical protein HMPREF1022_03067 [Desulfovibrio sp.
6_1_46AFAA]
Length = 87
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T ++V LSF +++ L N F +G + VNL+MD++ RPRGF F+ E+++R AI
Sbjct: 3 TSIYVGNLSFSSTQAGLENLFSQYGTPLSVNLIMDRVTGRPRGFGFVEM-EEDDARNAIA 61
Query: 138 GMHG 141
G++G
Sbjct: 62 GLNG 65
>gi|171680237|ref|XP_001905064.1| hypothetical protein [Podospora anserina S mat+]
gi|170939745|emb|CAP64971.1| unnamed protein product [Podospora anserina S mat+]
Length = 176
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY +++++AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNPDDAQKAIS 61
Query: 138 GM 139
M
Sbjct: 62 AM 63
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 70 SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
S S Q +T LF+S + + + L N F +GQ++ ++ + G AF+RYAT
Sbjct: 107 SASDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGNSLGTAFVRYATT 166
Query: 130 EESRRAIEGMHGK 142
EE+ RAIEGM GK
Sbjct: 167 EEAMRAIEGMSGK 179
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+F T+ED L F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 5 KLFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 64
Query: 139 MHGKVC 144
M+GK
Sbjct: 65 MNGKAV 70
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 45/63 (71%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ +G + E +V D+ NR RGF F+R++++ E+ A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P T LF+ LSF +ED +R +F +GQLV V D+ +GF ++ Y E +++A
Sbjct: 279 PTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKA 338
Query: 136 IEGMHG 141
+EG++G
Sbjct: 339 VEGLNG 344
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ R F+ LS+ TS+ L++AF+ FG LV+ +V+DK + R RGF F+ + +
Sbjct: 3 DDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMED 62
Query: 135 AIEGMHG 141
AIE M+G
Sbjct: 63 AIEAMNG 69
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ L+ AF+ FG L+E +V+DK + R RGF F+ + ++ AIE
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEE 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + + R FV GL++ T++ L+ AF +G++++ ++ D+ R RGF F+ + E+
Sbjct: 1 SAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAM 60
Query: 133 RRAIEGMHGK 142
R AI+GM+G+
Sbjct: 61 RDAIDGMNGQ 70
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++AF+ FG+L E +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDA 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 44/63 (69%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ T+++SL++AF+ FG + E +V+DK + R RGFAF+ + +++ AIE
Sbjct: 8 RCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|380491369|emb|CCF35369.1| cold response protein 2 [Colletotrichum higginsianum]
Length = 92
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY + ++++AI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAIA 61
Query: 138 GMHGKVCCCF 147
M+ F
Sbjct: 62 AMNNVEYAAF 71
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 69 HSLSTCQPKTR--LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
H S P+T L V GLS T+E LR AF +G + +N+V D + R RGFAFL Y
Sbjct: 104 HIGSRANPETNNCLGVFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFLSY 163
Query: 127 ATEEESRRAIEGMHG 141
+EE++R A + +G
Sbjct: 164 ESEEDAREAKDRTNG 178
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L AF FG++++ ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 134 RAIEGMHGK 142
AIEGM+G+
Sbjct: 62 DAIEGMNGQ 70
>gi|423302507|ref|ZP_17280529.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
gi|408470383|gb|EKJ88917.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
Length = 99
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 43/62 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++++GLS+RT++ L N F FG++ ++MD+ + RGFAF+ ++EE ++AI+ +
Sbjct: 3 IYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGKSRGFAFVEMTSDEEGQKAIDEL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|342889186|gb|EGU88353.1| hypothetical protein FOXB_01152 [Fusarium oxysporum Fo5176]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E ++++AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIA 61
Query: 138 GMH 140
M+
Sbjct: 62 TMN 64
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ T++ SL AF+ +G ++E +V D+ NR RGF F+ + EE AI
Sbjct: 6 RCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRK 65
Query: 139 MHGK 142
MH +
Sbjct: 66 MHNQ 69
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++++LR F +G + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 SKLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMN 61
Query: 138 GM 139
M
Sbjct: 62 AM 63
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 14 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 73
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 74 DAMMAMNGK 82
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|387016396|gb|AFJ50317.1| Heterogeneous nuclear ribonucleoprotein D0 isoform b [Crotalus
adamanteus]
Length = 330
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 144 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 203
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 204 TFKDEEAVKKIMEKKYHNV 222
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++FV GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 69 EDEGKMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVEK 128
Query: 135 AIE----GMHGKVC 144
+ ++GKV
Sbjct: 129 VTDQKEHKLNGKVI 142
>gi|194337130|ref|YP_002018924.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309607|gb|ACF44307.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 90
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L++ +ED LR+AF FGQ+ +++ DK + R +GF F+ E E+R AIE M
Sbjct: 3 IYIGNLAYTVTEDDLRDAFSEFGQVESASIINDKFSGRSKGFGFVDMPNESEAREAIESM 62
Query: 140 HGK 142
+ K
Sbjct: 63 NEK 65
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P +S T P LFV+ +++ TSE LR F+ FG + ++ +V +KI +PRG
Sbjct: 85 IALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGK 142
+AF+ Y E + A + GK
Sbjct: 145 YAFVEYEHERDMHSAYKHADGK 166
>gi|255553947|ref|XP_002518014.1| RNA binding protein, putative [Ricinus communis]
gi|223542996|gb|EEF44532.1| RNA binding protein, putative [Ricinus communis]
Length = 267
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 40/58 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
T++FV GL++ T +++L+N FQ FG+++E ++ DK R +G+ F+ + E +RRA
Sbjct: 19 TKVFVGGLAWETHKETLKNYFQQFGEILEAVVIFDKNTGRSKGYGFVTFKEAEAARRA 76
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL F T E SL AF +G + +V++V D+ R RGF F+ + E+++ A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MAAMNGK 69
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|452002034|gb|EMD94493.1| hypothetical protein COCHEDRAFT_1131167 [Cochliobolus
heterostrophus C5]
Length = 125
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T + +LR+ F+ FG + E +V D+ R RGF F+RYA E E+ A++
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 139 MHGK 142
M+ +
Sbjct: 63 MNNE 66
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+++ ++F +E L+ AFQ FG + V+L D + NR +GFAFL Y E ++ +IE
Sbjct: 128 RIYIGSINFELNEAMLKQAFQPFGPVKAVSLTFDPVTNRHKGFAFLEYEIPEAAQLSIEQ 187
Query: 139 MHGKV 143
M+G +
Sbjct: 188 MNGVI 192
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 35/62 (56%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +E +++ F+ FG++ L D ++ +G+ F+ Y T + ++ AI
Sbjct: 225 RIYIASIHPDLTETDIQSVFEAFGEIKSCVLAKDTATSKHKGYGFIEYGTVQAAQDAISA 284
Query: 139 MH 140
M+
Sbjct: 285 MN 286
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|340992759|gb|EGS23314.1| hypothetical protein CTHT_0009820 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 191
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +L+ F+ FG + E +V D+ R RGF F+RY E ++++A++
Sbjct: 2 SKLFIGGLAWHTEDATLKKKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEADAQKAMD 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|302143805|emb|CBI22666.3| unnamed protein product [Vitis vinifera]
Length = 188
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 58 CFPLACLPP--SPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA 115
C + CL P+SL+ + + RLF+ L R SE +L F FG++V + +
Sbjct: 9 CHQIDCLCSIMDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRG 68
Query: 116 ---NRPRGFAFLRYATEEESRRAIEGMHGKVCC 145
PRGFAF+ ++T+EE+ A E MHGK+ C
Sbjct: 69 PKRGEPRGFAFVEFSTKEEAELAKEKMHGKLIC 101
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +V+ ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEYRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGK 142
+ AIEGM+G+
Sbjct: 61 SMKDAIEGMNGQ 72
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+L++ LSF +E+ +++ F G + EVNL+MDK+ R RGF F+ +T+E + A++
Sbjct: 2 NKLYIGNLSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQ 61
Query: 138 GMHGK 142
++GK
Sbjct: 62 NLNGK 66
>gi|449499935|ref|XP_004175398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 340
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 132 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 191
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 192 TFKEEEPVKKIMEKKYHNV 210
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 57 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 116
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 117 VMDQKEHKLNGKV 129
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 120 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 179
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 180 TFKEEEPVKKIMEKKYHNV 198
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 35 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 94
Query: 125 RYATEEESRRAIE----GMHGKVC 144
+ E + ++ ++GKV
Sbjct: 95 LFKESESVDKVMDQKEHKLNGKVI 118
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L AF +G+++E ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMR 61
Query: 134 RAIEGMHGK 142
AIEGM+G+
Sbjct: 62 DAIEGMNGQ 70
>gi|406997918|gb|EKE15908.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 93
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V GL + T+E+SL F G + N++ D+++ R +GF F+ +TEE +++AIE
Sbjct: 4 KLYVGGLPYSTTEESLGEHFSQAGAVESANIITDRMSGRSKGFGFVEMSTEEGAQKAIEM 63
Query: 139 MHGK 142
HGK
Sbjct: 64 FHGK 67
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++D+LR AF FG +V+ ++ D+ R RGF F+ Y++ +E+ AI G
Sbjct: 5 KIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISG 64
Query: 139 MHGK 142
++ +
Sbjct: 65 LNDQ 68
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 229 TFKEEEPVKKIMEKKYHNV 247
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|326515262|dbj|BAK03544.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520728|dbj|BAJ92727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA---NRPRGFAFL 124
P L + + +RL+V L FR SE + F +G+++ + ++ PRG+AF+
Sbjct: 5 PKGLDSDKSASRLYVGNLDFRISESDVIKMFSPYGKIIAEDFLLHTRGPKRGEPRGYAFV 64
Query: 125 RYATEEESRRAIEGMHGKVCC 145
+Y T+EE++ A E M+GK+ C
Sbjct: 65 QYTTKEEAQLAKEKMNGKLVC 85
>gi|4455315|emb|CAB36850.1| RNA-binding protein like [Arabidopsis thaliana]
gi|7268090|emb|CAB78428.1| RNA-binding protein like [Arabidopsis thaliana]
Length = 126
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 83 SGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
S LS T++D LR AF G+G +V+ ++ D+ +R RGF F+ Y++ E+ A+ GM GK
Sbjct: 47 SDLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGMDGK 106
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 409 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 468
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 469 TFKEEEPVKKIMEKKYHNV 487
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE- 137
++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E + ++
Sbjct: 338 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 397
Query: 138 ---GMHGKV 143
++GKV
Sbjct: 398 KEHKLNGKV 406
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + + R FV GL++ T++ L+ AF +G++++ ++ D+ R RGF F+ + E+
Sbjct: 2 SAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAM 61
Query: 133 RRAIEGMHGK 142
R AI+GM+G+
Sbjct: 62 RDAIDGMNGQ 71
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + + R FV GL++ T++ L+ AF +G++++ ++ D+ R RGF F+ + E+
Sbjct: 2 SAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAM 61
Query: 133 RRAIEGMHGK 142
R AI+GM+G+
Sbjct: 62 RDAIDGMNGQ 71
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|344249843|gb|EGW05947.1| Heterogeneous nuclear ribonucleoprotein D0 [Cricetulus griseus]
Length = 257
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 71 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 130
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 131 TFKEEEPVKKIMEKKYHNV 149
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE-- 137
+F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E + ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 138 --GMHGKV 143
++GKV
Sbjct: 61 EHKLNGKV 68
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|123415396|ref|XP_001304682.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886151|gb|EAX91752.1| hypothetical protein TVAG_147530 [Trichomonas vaginalis G3]
Length = 141
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q T++ V GLS++T+ + + AF FG LVE L++++ N RGFAFL Y T++E++
Sbjct: 8 QGSTKISVFGLSYKTNVNDIYKAFSKFGTLVECKLILNE-NNESRGFAFLSYKTQKEAQY 66
Query: 135 AIEGMHGK 142
AI+ +GK
Sbjct: 67 AIDCTNGK 74
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL F T E SL AF +G + +V++V D+ R RGF F+ + E+++ A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MAAMNGK 69
>gi|149046822|gb|EDL99596.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_f [Rattus
norvegicus]
gi|149046823|gb|EDL99597.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_f [Rattus
norvegicus]
Length = 257
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 71 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 130
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 131 TFKEEEPVKKIME 143
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE-- 137
+F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+ + E + ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 138 --GMHGKV 143
++GKV
Sbjct: 61 EHKLNGKV 68
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 54 GRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
GR LA P S Q + +L++ GLS+ T+ D L F +G++ E ++ DK
Sbjct: 136 GRITVSNLAVASTGP-GQSADQAQRKLYIGGLSYDTANDKLLEVFSKYGEIEEGSVAYDK 194
Query: 114 IANRPRGFAFLRYATEEESRRAIE 137
N+ RGFAF+ + T E ++RA++
Sbjct: 195 NTNKSRGFAFVTFKTVEATKRALK 218
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 41/59 (69%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GL++ TS +L +AF+ +G++ E ++MDK + + RGF F+ + + +++A++
Sbjct: 70 KLFVRGLAWETSSQTLCDAFEQYGEIEEGAVIMDKASGKSRGFGFVTFKHMDSAQKALK 128
>gi|149046824|gb|EDL99598.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_g [Rattus
norvegicus]
Length = 208
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 71 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 130
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 131 TFKEEEPVKKIME 143
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+ + E + ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD 58
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
P SLS TRL+V L +ED LR F+ FG + ++NL +D R +GFAF++Y
Sbjct: 264 PPSLSA---PTRLYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYK 320
Query: 128 TEEESRRAIEGMHG 141
+ E++++A++ +G
Sbjct: 321 SPEDAKKALQHCNG 334
>gi|414586039|tpg|DAA36610.1| TPA: hypothetical protein ZEAMMB73_089352 [Zea mays]
gi|414586040|tpg|DAA36611.1| TPA: RNA recognition water-stress protein1, mRNA isoform 2 [Zea
mays]
gi|414586041|tpg|DAA36612.1| TPA: hypothetical protein ZEAMMB73_089352 [Zea mays]
Length = 794
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV GL +E+ L F G++ EV L+M+ + + +GFAFLRYAT E++RRA+ +
Sbjct: 214 IFVGGLDKDATENDLMKVFGEVGEITEVRLMMNPVTKKNKGFAFLRYATVEQARRAVSEL 273
Query: 140 -----HGKVC 144
GK C
Sbjct: 274 KNPLVRGKQC 283
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 43/61 (70%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS++ +++ LR AF+ +G++ +++DK +NR +GF F+ A++E++ AI+ M
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAIKEM 79
Query: 140 H 140
H
Sbjct: 80 H 80
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2; Short=xCIRP2;
AltName: Full=Glycine-rich RNA-binding protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GL+F T+E+SL F +GQ+ EV +V D+ R RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDA 62
Query: 136 IEGMHGKVC 144
+ M+GK
Sbjct: 63 MMAMNGKAV 71
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 341 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 400
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 401 DDAKKALEQLNG 412
>gi|297804134|ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
gi|297315787|gb|EFH46210.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 64 LPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
P S SL +++ V L F TSED L+ F FG++ EV L+ D+ R +G+AF
Sbjct: 26 FPKSKASLFNYPLASKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIRDESMKRSKGYAF 85
Query: 124 LRYATEEESRRAIEGMHGKV 143
+++ +++++ AIE M ++
Sbjct: 86 IQFTSQDDAFLAIETMDRRM 105
>gi|160872542|ref|ZP_02062674.1| RNA-binding protein [Rickettsiella grylli]
gi|159121341|gb|EDP46679.1| RNA-binding protein [Rickettsiella grylli]
Length = 133
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V GLS+ +D LR F FG + V ++ D + R +GF F+ +T EE++ AIE
Sbjct: 4 RLYVGGLSYSVDDDGLRELFTPFGTVSFVKVIRDFHSGRSKGFGFVEMSTPEEAKEAIEA 63
Query: 139 MHGKV 143
+HG +
Sbjct: 64 LHGSI 68
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T++D LR F +G + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T + +LR+ F+ FG + E +V D+ R RGF F+RYA E E+ A++
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 139 MHGK 142
M+ +
Sbjct: 63 MNNE 66
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P + LF+ LSF SED + NAF G++ V L D + RP+GF ++ +A +E ++ A
Sbjct: 304 PSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 363
Query: 136 IEGMHGK 142
++ M G+
Sbjct: 364 LDAMTGQ 370
>gi|194382812|dbj|BAG64576.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 15 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 74
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 75 TFKEEEPVKKIME 87
>gi|350588024|ref|XP_003482537.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Sus
scrofa]
Length = 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 15 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 74
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 75 TFKEEEPVKKIME 87
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL F T E SL AF +G + +V++V D+ R RGF F+ + E+++ A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MAAMNGK 69
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++ F+ FG+L+E +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDA 67
Query: 139 MHG 141
M+G
Sbjct: 68 MNG 70
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 91 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 150
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 151 TFKEEEPVKKIMEKKYHNV 169
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 6 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 65
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 66 LFKESESVDKVMDQKEHKLNGKV 88
>gi|148702007|gb|EDL33954.1| mCG116386, isoform CRA_d [Mus musculus]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E + A+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAM 64
Query: 137 EGMHGKV 143
M+G+V
Sbjct: 65 RAMNGEV 71
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++FV GLS+ + + +LR AF +G++VE +VMD R +GF F+ ++ +EE+ AI+
Sbjct: 70 SKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIK 129
Query: 138 GMHGK 142
+ GK
Sbjct: 130 ALDGK 134
>gi|431916163|gb|ELK16415.1| Heterogeneous nuclear ribonucleoprotein D0 [Pteropus alecto]
Length = 334
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 210 TFKEEEPVKKIMEKKYHNV 228
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKV 147
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L QG + A L P +T P LFV+ L++ T
Sbjct: 92 PVPTCETKAEKKDRIRKSKLDQGAAKVA-EELQKYDPQSDPNATGDPYKTLFVARLNYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
SE ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+
Sbjct: 151 SEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGR 203
>gi|357127016|ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 57 ACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIAN 116
+ PL L + S+C ++LFV GLS+ T+E +L++AF G + EV ++ +
Sbjct: 12 STIPLRNLLNRSANFSSC---SKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTG 68
Query: 117 RPRGFAFLRYATEEESRRAIEGM 139
R +G+ F+++++E E+ A+E M
Sbjct: 69 RSKGYGFVKFSSESEAAAALEKM 91
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L QG + A L P +T P LFV+ L++ T
Sbjct: 92 PVPTCETKAEKKDRIRKSKLDQGAAKVA-EELQKYDPQSDPNATGDPYKTLFVARLNYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
SE ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+
Sbjct: 151 SEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGR 203
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 323 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 382
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 383 DDAKKALEQLNG 394
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 100 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 159
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 160 TFKEEEPVKKIMEKKYHNV 178
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 15 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 74
Query: 125 RYATEEESRRAIE----GMHGKVC 144
+ E + ++ ++GKV
Sbjct: 75 LFKESESVDKVMDQKEHKLNGKVI 98
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 120 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 179
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 180 TFKEEEPVKKIMEKKYHNV 198
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 35 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 94
Query: 125 RYATEEESRRAIE----GMHGKVC 144
+ E + ++ ++GKV
Sbjct: 95 LFKEAESVDKVMDQKEHKLNGKVI 118
>gi|327273004|ref|XP_003221273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Anolis
carolinensis]
Length = 334
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 149 PKRAKAMKTKEPIKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 208
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 209 TFKDEEPVKKIME 221
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE- 137
++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E + ++
Sbjct: 78 KMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKVMDQ 137
Query: 138 ---GMHGKVC 144
++GKV
Sbjct: 138 KEHKLNGKVI 147
>gi|449465308|ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
gi|449524890|ref|XP_004169454.1| PREDICTED: uncharacterized LOC101207282 [Cucumis sativus]
Length = 283
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + R+FV GLS+ SE L NAF FG+++E +++++ RPRGF F+ +A
Sbjct: 2 ASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGM 61
Query: 133 RRAIEGMHGK 142
AI MHG+
Sbjct: 62 DDAIREMHGQ 71
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P + LF+ LSF SED + NAF G++ V L D + RP+GF ++ +A +E ++ A
Sbjct: 300 PSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 359
Query: 136 IEGMHGK 142
I+ M G+
Sbjct: 360 IDAMTGQ 366
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 78 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 137
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 138 TFKEEEPVKKIME 150
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E + ++
Sbjct: 7 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD 65
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 327 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 386
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 387 DDAKKALEQLNG 398
>gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 267
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 81 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 140
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 141 TFKEEEPVKKIME 153
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 6 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 65
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 66 VMDQKEHKLNGKV 78
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 91 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 150
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 151 TFKEEEPVKKIMEKKYHNV 169
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 6 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 65
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 66 LFKESESVDKVMDQKEHKLNGKV 88
>gi|18422781|ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
gi|21542438|sp|P39697.2|RT19_ARATH RecName: Full=40S ribosomal protein S19, mitochondrial; Flags:
Precursor
gi|15028321|gb|AAK76637.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|20259155|gb|AAM14293.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|332008115|gb|AED95498.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
Length = 212
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 55 RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
+G P++ + S +ST +L++ GLS T E SL++AF F + E ++ +K+
Sbjct: 13 QGVNVPVSSMLGSLRYMST-----KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKV 67
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKVCCCF 147
R RG+ F+ + +E+ + AI M+G+ F
Sbjct: 68 TGRSRGYGFVNFISEDSANSAISAMNGQELNGF 100
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P ++ T P LFV+ +++ TSE LR F+ FG + ++ +V +KI +PRG
Sbjct: 85 IALWEPHNNAAGTVDPFKTLFVARVNYDTSESKLRREFEVFGSIKKIVIVHNKITGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGK 142
+AF+ Y E + A + GK
Sbjct: 145 YAFVEYEHERDMHSAYKHADGK 166
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 44/63 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TRL++ L++ +++SLR AF+ FG + + +V D+ + R +GF F+ + +E++++AIE
Sbjct: 2 TRLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIE 61
Query: 138 GMH 140
M+
Sbjct: 62 EMN 64
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ R FV LS+ T + L AF FG++++ ++ D+ R RGF F+ ++ E+ + A
Sbjct: 7 AEYRCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDA 66
Query: 136 IEGMHGK 142
IEGM+GK
Sbjct: 67 IEGMNGK 73
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++++L F FG + E +V D+ NR RGF F+R+AT+ E+ A++
Sbjct: 3 KLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQR 62
Query: 139 MH 140
M+
Sbjct: 63 MN 64
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 329 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 388
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 389 DDAKKALEQLNG 400
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 326 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 385
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 386 DDAKKALEQLNG 397
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P + V LS+ ED +R+ F G+G +++V + D+ RPRG AF++YAT+ E+ A
Sbjct: 42 PGVSVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAA 101
Query: 136 IEGMHG 141
++G G
Sbjct: 102 VDGGVG 107
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV L FR SE L+ F+ G++V V+L+ D+ + RPRGF F+ Y E+ ++ A+ +
Sbjct: 137 LFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKDAVSNL 196
Query: 140 HG 141
+G
Sbjct: 197 NG 198
>gi|301753349|ref|XP_002912535.1| PREDICTED: hypothetical protein LOC100472152 [Ailuropoda
melanoleuca]
Length = 642
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 456 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 515
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 516 TFKEEEPVKKIMEKKYHNV 534
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE- 137
++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E + ++
Sbjct: 385 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 444
Query: 138 ---GMHGKV 143
++GKV
Sbjct: 445 KEHKLNGKV 453
>gi|457760|emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
gi|459422|emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclear encoded [Arabidopsis
thaliana]
Length = 212
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 55 RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
+G P++ + S +ST +L++ GLS T E SL++AF F + E ++ +K+
Sbjct: 13 QGVNVPVSSMLGSLRYMST-----KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKV 67
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKVCCCF 147
R RG+ F+ + +E+ + AI M+G+ F
Sbjct: 68 TGRSRGYGFVNFISEDSANSAISAMNGQELNGF 100
>gi|8809615|dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
Length = 244
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 55 RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
+G P++ + S +ST +L++ GLS T E SL++AF F + E ++ +K+
Sbjct: 45 QGVNVPVSSMLGSLRYMST-----KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKV 99
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKVCCCF 147
R RG+ F+ + +E+ + AI M+G+ F
Sbjct: 100 TGRSRGYGFVNFISEDSANSAISAMNGQELNGF 132
>gi|357472741|ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 112
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 44/70 (62%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
T+LF++GLS+ T+E LR+ F+ GQ++EV ++ + +G+ F+R+ +E +
Sbjct: 30 HSSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNSETAAAT 89
Query: 135 AIEGMHGKVC 144
A + +HG++
Sbjct: 90 ARKELHGQIV 99
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 122 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 181
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 182 TFKEEEPVKKIMEKKYHNV 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 37 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 96
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 97 LFKESESVDKVMDQKEHKLNGKV 119
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 43/61 (70%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS++ +++ LR AF+ +G++ +++DK +NR +GF F+ A++E++ AI+ M
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIKEM 79
Query: 140 H 140
H
Sbjct: 80 H 80
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GL++ T+ D+LR F FG++ + ++ D+ R RGF F+ ++++EE+ AIE
Sbjct: 2 SKLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIE 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS++T+ED LRN F FG + ++ D+ + +GF F+ +T+EE+ AI G
Sbjct: 4 KLYVGNLSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIEMSTDEEAAAAITG 63
Query: 139 MHG 141
+G
Sbjct: 64 TNG 66
>gi|194912401|ref|XP_001982498.1| GG12847 [Drosophila erecta]
gi|190648174|gb|EDV45467.1| GG12847 [Drosophila erecta]
Length = 513
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V LS ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI+
Sbjct: 187 TNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 246
Query: 138 GMHGKV 143
++ V
Sbjct: 247 ALNNTV 252
>gi|119626278|gb|EAX05873.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_b [Homo sapiens]
Length = 152
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 15 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 74
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 75 TFKEEEPVKKIME 87
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +V+ ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGK 142
+ AIEGM+G+
Sbjct: 61 SMKDAIEGMNGQ 72
>gi|406886422|gb|EKD33455.1| hypothetical protein ACD_76C00026G0004 [uncultured bacterium]
Length = 83
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
K +LFV +S+ ++ L F G++V +VMDK+ R RGF F+ AT+E + AI
Sbjct: 2 KNKLFVGNISWDATDSDLSKLFAEVGEVVSAQIVMDKLTGRSRGFGFVEMATDELAEAAI 61
Query: 137 EGMHGK 142
+ + GK
Sbjct: 62 KALDGK 67
>gi|212550891|ref|YP_002309208.1| RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549129|dbj|BAG83797.1| putative RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 98
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 43/62 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+F++GLSFR ++D L+N F+ +G + +++D+ +R +G+ F+ +EE+R+AI +
Sbjct: 3 IFIAGLSFRLNDDDLKNLFESYGTVSSARVIIDRQTSRSKGYGFVEMEDDEEARKAIAEL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|133262|sp|P17132.1|HNRPC_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein C;
Short=hnRNP C; AltName: Full=hnRNP core protein C
gi|57810|emb|CAA34808.1| hnRNP C protein C-terminal fragment (158 AA) [Rattus sp.]
gi|226831|prf||1608114A hnRNP C protein
Length = 158
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 21 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 80
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 81 TFKEEEPVKKIME 93
>gi|408398680|gb|EKJ77809.1| hypothetical protein FPSE_02043 [Fusarium pseudograminearum CS3096]
Length = 178
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E +++ AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIA 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 181
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E +++ AI
Sbjct: 2 AKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYNQEADAQSAIA 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|356526775|ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 146
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+LFV+GLS+ T+E LR+AF G+++EV ++ D + + RG+ F+R+ +E +
Sbjct: 55 HSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAA 114
Query: 135 AIEGMHGKV 143
+ M+G++
Sbjct: 115 THKEMNGQI 123
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T +FV+ L F T+E+ L++ F+ +G++ V + D+ +PRGFAF+ A E E+ +AIE
Sbjct: 2 TSIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIE 61
Query: 138 GMH 140
+
Sbjct: 62 ALD 64
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 104 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 163
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 164 TFKEEEPVKKIMEKKYHNV 182
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 19 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 78
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 79 LFKESESVDKVMDQKEHKLNGKV 101
>gi|116256518|ref|NP_001070734.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Mus musculus]
gi|148688364|gb|EDL20311.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Mus
musculus]
Length = 336
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKVC 144
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKVI 148
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV L F ++E+ L F +G L E++ +D++ +P+GFAF+ Y E + +A
Sbjct: 79 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYAE 138
Query: 139 MHGKV 143
M G+V
Sbjct: 139 MDGQV 143
>gi|356561166|ref|XP_003548856.1| PREDICTED: uncharacterized protein LOC100819035 [Glycine max]
Length = 953
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV GL +E+ LR FQ G++VEV L + N+ +G+AF+++A +E +++A+ M
Sbjct: 460 IFVGGLDRDATEEDLRKVFQRIGEIVEVRLHKNSSTNKNKGYAFVKFANKENAKKALSEM 519
Query: 140 -----HGKVC 144
HGK C
Sbjct: 520 KNPVIHGKRC 529
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
P P ++ + +F++GL ED +R F+ +G++V + L + + + + + F+
Sbjct: 627 PDPEIMAQVK---SVFINGLPPHWDEDHVRELFKAYGEIVRIVLARNMSSAKRKDYGFVD 683
Query: 126 YATEEESRRAIEGMH 140
++T E + ++G++
Sbjct: 684 FSTHEAAVACVDGVN 698
>gi|118792383|ref|XP_320292.3| AGAP012250-PA [Anopheles gambiae str. PEST]
gi|116116874|gb|EAA00555.3| AGAP012250-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
P+ P +F+ L+ +E+ LR F FG +V LV D + PRG+AF+ Y+
Sbjct: 51 PNRKVKGNPLHTIFIGRLAHSVTEEQLRAKFAPFGTIVHARLVTDIVTGLPRGYAFIEYS 110
Query: 128 TEEESRRAIEGMHG 141
E+ RAIE MHG
Sbjct: 111 ARGEALRAIERMHG 124
>gi|449431998|ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
gi|449477982|ref|XP_004155183.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
Length = 481
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+ +F+ GLS E+ LR+ + G++ E+ ++ DK + +G+AF+ + T+E +++AIE
Sbjct: 105 SEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIE 164
Query: 138 GMHGK 142
+HGK
Sbjct: 165 DLHGK 169
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
P + + Q K L+V + T+ + L+ FQ G++ +VN+ K + R FAF+ YA
Sbjct: 271 PDNSAAAQVKA-LYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYA 329
Query: 128 TEEESRRAIE 137
+ +A++
Sbjct: 330 ERSSALKAVK 339
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 105 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 164
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 165 TFKEEEPVKKIMEKKYHNV 183
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 20 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 79
Query: 125 RYATEEESRRAIE----GMHGKVC 144
+ E + ++ ++GKV
Sbjct: 80 LFKESESVDKVMDQKEHKLNGKVI 103
>gi|194390332|dbj|BAG61935.1| unnamed protein product [Homo sapiens]
Length = 303
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 117 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 176
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 177 TFKEEEPVKKIME 189
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 42 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 101
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 102 VMDQKEHKLNGKV 114
>gi|224049399|ref|XP_002190694.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Taeniopygia guttata]
gi|449499942|ref|XP_004175399.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 318
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 132 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 191
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 192 TFKEEEPVKKIME 204
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 57 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 116
Query: 135 AIE----GMHGKVC 144
++ ++GKV
Sbjct: 117 VMDQKEHKLNGKVI 130
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LF+ GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV L F ++E+ L F +G L E++ +DK+ +P+GFAF+ Y E + +A+
Sbjct: 404 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFITYMIPEHAVKALAE 463
Query: 139 MHGKV 143
+ G+V
Sbjct: 464 LDGQV 468
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQL--VEVNLVMDKIAN-RPRGFAFLRYATEEES 132
P LF+ L+F T+ED+L+ F G L ++ DK GF F+ Y E +
Sbjct: 714 PGCTLFIKNLNFATTEDTLKETFSKVGALKSCTISKKKDKAGTLLSMGFGFVEYKKPESA 773
Query: 133 RRAIEGMHG 141
++A+ + G
Sbjct: 774 QKALRQLQG 782
>gi|302840391|ref|XP_002951751.1| hypothetical protein VOLCADRAFT_105177 [Volvox carteri f.
nagariensis]
gi|300262999|gb|EFJ47202.1| hypothetical protein VOLCADRAFT_105177 [Volvox carteri f.
nagariensis]
Length = 924
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TRL V L+ +ED +R F +G L V L MD+ N PRGFA + Y + E++ RA++
Sbjct: 47 TRLVVGNLTRNVTEDHIREIFSCYGVLKSVELAMDRAVNLPRGFAHVEYESHEDAERALD 106
Query: 138 GMH 140
M+
Sbjct: 107 FMN 109
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 139 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 198
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 199 TFKEEEPVKKIMEKKYHNV 217
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE- 137
++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E + ++
Sbjct: 68 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 127
Query: 138 ---GMHGKV 143
++GKV
Sbjct: 128 KEHKLNGKV 136
>gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Homo sapiens]
gi|332819428|ref|XP_003310368.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735088|ref|XP_003776521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 4
[Pongo abelii]
gi|402869393|ref|XP_003898747.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Papio anubis]
gi|2815614|gb|AAC23476.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|119626279|gb|EAX05874.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626283|gb|EAX05878.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626288|gb|EAX05883.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|158258851|dbj|BAF85396.1| unnamed protein product [Homo sapiens]
gi|380783615|gb|AFE63683.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|383417961|gb|AFH32194.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|384940048|gb|AFI33629.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
Length = 336
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKVC 144
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKVI 148
>gi|268573870|ref|XP_002641912.1| C. briggsae CBR-RNP-7 protein [Caenorhabditis briggsae]
Length = 312
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 39 KRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAF 98
KRR + L + + +G +A P+ +S +T P LFV +++ TSE LR F
Sbjct: 71 KRRQKEELLAYKVEQG------IATWNPAENSRATEDPYRTLFVGRINYETSESKLRREF 124
Query: 99 QGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHG 141
+ +G++ ++ +V D+ + +PRG+AF+ Y+ + E A + G
Sbjct: 125 EAYGKIKKLTMVHDE-SGKPRGYAFIEYSDKAEMHTAYKKADG 166
>gi|410351153|gb|JAA42180.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 337
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 151 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 210
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 211 TFKEEEPVKKIME 223
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 76 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 135
Query: 135 AIE----GMHGKVC 144
++ ++GKV
Sbjct: 136 VMDQKEHKLNGKVI 149
>gi|56388843|gb|AAH87677.1| Rbm3 protein [Rattus norvegicus]
Length = 148
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E + A+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAM 64
Query: 137 EGMHGKV 143
M+G+V
Sbjct: 65 RAMNGEV 71
>gi|433344|gb|AAC50056.1| p37 AUF1 [Homo sapiens]
Length = 286
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 148 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 208 TFKEEEPVKKIME 220
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 73 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 132
Query: 135 AIE 137
++
Sbjct: 133 VMD 135
>gi|195399021|ref|XP_002058119.1| GJ15667 [Drosophila virilis]
gi|194150543|gb|EDW66227.1| GJ15667 [Drosophila virilis]
Length = 428
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V LS ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI+
Sbjct: 103 TNLYVINLSRNINDDQLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 162
Query: 138 GMHGKV 143
++ V
Sbjct: 163 ALNNTV 168
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ G+S+ T+EDSLR F FG++VE ++ D+ R RGF F+ +A + R +
Sbjct: 7 KLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVVTE 66
Query: 139 MH 140
H
Sbjct: 67 KH 68
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++FV GLS +E + F FG + +V ++ D RPRGF F+ Y +E+
Sbjct: 108 KIFVGGLSSTITEGDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSED 159
>gi|308501349|ref|XP_003112859.1| CRE-RNP-7 protein [Caenorhabditis remanei]
gi|308265160|gb|EFP09113.1| CRE-RNP-7 protein [Caenorhabditis remanei]
Length = 326
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 39 KRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAF 98
KRR D L + + +G +A P+ + ++ P LFV +++ TSE LR F
Sbjct: 71 KRRQKDELLAYKVEQG------IATWNPAENPRASEDPYRTLFVGRINYETSESKLRREF 124
Query: 99 QGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHG 141
+ +G++ ++ +V D+ A +PRG+AF+ Y+ + E A + G
Sbjct: 125 EAYGKIKKLTMVHDE-AGKPRGYAFIEYSDKAEMHTAYKKADG 166
>gi|302808477|ref|XP_002985933.1| hypothetical protein SELMODRAFT_424875 [Selaginella moellendorffii]
gi|300146440|gb|EFJ13110.1| hypothetical protein SELMODRAFT_424875 [Selaginella moellendorffii]
Length = 229
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +RL VS LS +E L+ F +G ++ V+L MDK N P+GFA++ Y ++ ++
Sbjct: 55 AEDSSRLHVSQLSRNVNESHLKEIFGNYGDIIAVDLAMDKTVNLPKGFAYVDYKSKSDAE 114
Query: 134 RAIEGMHG 141
+A + M G
Sbjct: 115 KAQQFMDG 122
>gi|221114449|ref|XP_002154409.1| PREDICTED: uncharacterized protein LOC100213955 [Hydra
magnipapillata]
Length = 397
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV GL +ED LR+ F+ FG + EV+L+ D+ NR RGFAF+ + E+ + + I+
Sbjct: 114 KVFVGGLPSSITEDDLRSHFEKFGAVHEVDLLRDRDTNRLRGFAFVTFEDEDSADKCIQK 173
Query: 139 MHGKVCCCF 147
++C F
Sbjct: 174 RAQEICKKF 182
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKV 147
>gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus]
Length = 334
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 148 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 208 TFKEEEPVKKIME 220
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+ + E +
Sbjct: 73 EDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 132
Query: 135 AIE----GMHGKVC 144
++ ++GKV
Sbjct: 133 VMDQKEHKLNGKVI 146
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ LS+ +ED LR+ F +G + V + D+ +RPRGFAF+ + +EE AIE +
Sbjct: 3 IYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVEMSKDEEELAAIEAL 62
Query: 140 HGKVCCCFWMA 150
G WM
Sbjct: 63 DG----ADWMG 69
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKGEEPVKKIME 241
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|403263354|ref|XP_003924002.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Saimiri boliviensis boliviensis]
Length = 336
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKV 147
>gi|391343712|ref|XP_003746150.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Metaseiulus
occidentalis]
Length = 562
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF+ FG + +N+ D I +R +GFAF+ + E ++ A+E
Sbjct: 120 RIYVGSISFELKEDAVRTAFKPFGPVKAINMSYDTITSRHKGFAFVEFELPEAAQLALEQ 179
Query: 139 MHG 141
M+G
Sbjct: 180 MNG 182
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P LFV LSF + D +R AF+ FG + + + PRGFA++++++ EE++
Sbjct: 211 SEPSDTLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRPGTEDPRGFAYVQFSSVEEAK 270
Query: 134 RAIEGMHGK 142
A++GM+G+
Sbjct: 271 AALDGMNGE 279
>gi|361127085|gb|EHK99065.1| putative Zinc finger CCCH domain-containing protein 42 [Glarea
lozoyensis 74030]
Length = 215
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 58 CFPLACLPPSPHSLSTCQ------PKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLV 110
F ++ +PP+P S + Q P+T +++ GL F SE + F FG+ V +NL+
Sbjct: 15 SFCVSVVPPAPPSANAFQMVVRDKPRTTYIYIGGLPFELSEGDIITIFSQFGEPVYINLI 74
Query: 111 MDKIANRPRGFAFLRYATEEESRRAIEGMHGKVC 144
DK + +GFAFL+Y + + A++ + G V
Sbjct: 75 RDKETGKSKGFAFLKYEDQRSTDLAVDNLGGSVI 108
>gi|74001707|ref|XP_535627.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Canis lupus familiaris]
Length = 336
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKV 147
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV GLS+ T + SLR AF+ FG + E ++ D+ R RGF F+ +A ++ AIE
Sbjct: 4 KIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAIEE 63
Query: 139 MHG 141
M G
Sbjct: 64 MDG 66
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++ SL AF+ FG++V+ ++ D+ R RGF F+ +A E AI+
Sbjct: 3 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 62
Query: 139 MHGK 142
M+GK
Sbjct: 63 MNGK 66
>gi|116256516|ref|NP_001070735.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Mus musculus]
gi|148688365|gb|EDL20312.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Mus
musculus]
Length = 287
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKVC 144
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKVI 148
>gi|255585355|ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 276
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GLS+ +E L NAF +G++VE +++++ RPRGF F+ ++
Sbjct: 4 KEENRIFVGGLSWDVTERQLENAFNRYGKIVECQVMLERDTGRPRGFGFITFSDRRSMDD 63
Query: 135 AIEGMHGK 142
AI MHG+
Sbjct: 64 AIREMHGR 71
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ R FV GL++ T D+L AF +G++V+ ++ D+ R RGF F+ +A E+ I
Sbjct: 5 EDRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVI 64
Query: 137 EGMHGK 142
E M+G+
Sbjct: 65 EAMNGQ 70
>gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus]
Length = 285
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 148 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 208 TFKEEEPVKKIME 220
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+ + E +
Sbjct: 73 EDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 132
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 133 VMDQKEHKLNGKV 145
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 65 PPSPHSLSTCQPK------------TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMD 112
PP P S PK RL+V L+F ++D LR FQ FG + V+L D
Sbjct: 408 PPPPVQRSYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRD 467
Query: 113 KIANRPRGFAFLRYATEEESRRAIEGMHG 141
+I + +G+AF+++ +++ A+E M+G
Sbjct: 468 QITGKSKGYAFVQFKNMHDAKNAMEKMNG 496
>gi|127139089|ref|NP_001076008.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Rattus
norvegicus]
gi|149046818|gb|EDL99592.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Rattus
norvegicus]
gi|149046819|gb|EDL99593.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Rattus
norvegicus]
Length = 334
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 148 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 208 TFKEEEPVKKIME 220
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+ + E +
Sbjct: 73 EDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 132
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 133 VMDQKEHKLNGKV 145
>gi|51477708|ref|NP_001003810.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Homo sapiens]
gi|332819424|ref|XP_003310366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735086|ref|XP_003776520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pongo abelii]
gi|119626285|gb|EAX05880.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_g [Homo sapiens]
Length = 287
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKVC 144
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKVI 148
>gi|255691172|ref|ZP_05414847.1| RNA-binding protein [Bacteroides finegoldii DSM 17565]
gi|260623075|gb|EEX45946.1| hypothetical protein BACFIN_06178 [Bacteroides finegoldii DSM
17565]
Length = 99
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++++GLS+RT++ L N F FG++ ++MD+ RGFAF+ ++EE ++AI+ +
Sbjct: 3 IYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGNSRGFAFVEMTSDEEGQKAIDEL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V F+T+E+ L N F GQ+ V +V D+ RPRGFAF+ +A E ++RA+E M
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 140 HG 141
+G
Sbjct: 67 NG 68
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
+T P + LFV LSF +ED L F +G + V + D+ + RP+GF ++ + E
Sbjct: 403 ATSAPSSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVES 462
Query: 132 SRRAIEGMHGK 142
+++A EG+ G+
Sbjct: 463 AKKAHEGLAGQ 473
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV LS+ D L + F G++V + MD+ + RGF F+ +A+ E +A+E +
Sbjct: 311 IFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKALE-L 369
Query: 140 HGK 142
+GK
Sbjct: 370 NGK 372
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 165 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 224
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 225 TFKEEEPVKKIME 237
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 80 PRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 139
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 140 LFKESESVDKVMDQKEHKLNGKV 162
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 116 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 175
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 176 TFKEEEPVKKIME 188
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 31 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 90
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 91 LFKESESVDKVMDQKEHKLNGKV 113
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 140 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 199
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 200 TFKEEEPVKKIME 212
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 55 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 114
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 115 LFKESESVDKVMDQKEHKLNGKV 137
>gi|189345649|ref|YP_001942178.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
gi|189339796|gb|ACD89199.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
Length = 90
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L + +ED LR+ F FGQ+ N++ DK + R +GF F+ + E+R AIE M
Sbjct: 3 IYIGNLPYSVTEDDLRDVFSQFGQVDSANIITDKFSGRSKGFGFVDMPIDGEAREAIESM 62
Query: 140 HGK 142
+ K
Sbjct: 63 NDK 65
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
K LFV LSF T+EDSL AF +G + V L RP+GFAF+ +AT +E++ A+
Sbjct: 239 KKELFVGNLSFHTTEDSLGQAFGEYGTVTNVKLPQQD--GRPKGFAFVEFATHKEAQAAL 296
Query: 137 EGMHGK 142
+ +G+
Sbjct: 297 DAYNGQ 302
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T LFV +SF+T++DSL F G + V + M R +GFA + + + E +++A+E
Sbjct: 344 TTLFVGNISFQTTQDSLERHFSKCGPIKAVRVAMGD-DGRVKGFAHVEFESPESAQKALE 402
Query: 138 GMHGKVC 144
M+G C
Sbjct: 403 -MNGAPC 408
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+L+V L F +E+ L++ F G + V+L+MDK + RPRGF F+ T+E ++ A++
Sbjct: 3 TKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAVQ 62
Query: 138 GMHG 141
++G
Sbjct: 63 ALNG 66
>gi|74001711|ref|XP_857875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 9
[Canis lupus familiaris]
Length = 287
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKV 143
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKV 147
>gi|127138754|ref|NP_001076010.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Rattus
norvegicus]
gi|149046820|gb|EDL99594.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Rattus
norvegicus]
Length = 285
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 148 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 208 TFKEEEPVKKIME 220
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+ + E +
Sbjct: 73 EDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 132
Query: 135 AIE 137
++
Sbjct: 133 VMD 135
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|326503278|dbj|BAJ99264.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 40/61 (65%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+T++FV GL++ T + LR F+ +G ++E ++ D++ R +G+ F+ + E +RRA+
Sbjct: 21 QTKVFVGGLAWETPSEGLRQHFEQYGDILEAVVITDRLTGRSKGYGFVTFREAEAARRAV 80
Query: 137 E 137
E
Sbjct: 81 E 81
>gi|410292490|gb|JAA24845.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 336
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 150 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 210 TFKEEEPVKKIME 222
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+ + E +
Sbjct: 75 EDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Query: 135 AIE----GMHGKVC 144
++ ++GKV
Sbjct: 135 VMDQKEHKLNGKVI 148
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 190 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 249
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 250 TFKEEEPVKKIME 262
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 105 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 164
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 165 LFKESESVDKVMDQKEHKLNGKV 187
>gi|423196273|ref|ZP_17182856.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
gi|404632497|gb|EKB29102.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
Length = 92
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+R + D L+ F FGQ+ +V++++D+ + +GF F+ E+ +AI G
Sbjct: 2 KIYVGNLSYRMTADELKTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGEAEKAIAG 61
Query: 139 MHG 141
+HG
Sbjct: 62 LHG 64
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 229 TFKEEEPVKKIMEKKYHNV 247
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|345569077|gb|EGX51946.1| hypothetical protein AOL_s00043g680 [Arthrobotrys oligospora ATCC
24927]
Length = 150
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+R+ E ++ A+
Sbjct: 2 SKLFVGGLAWHTDDQTLRTKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTNEADATTAMN 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|116256514|ref|NP_031542.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Mus musculus]
gi|29145079|gb|AAH49098.1| Heterogeneous nuclear ribonucleoprotein D [Mus musculus]
gi|148688366|gb|EDL20313.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Mus
musculus]
Length = 306
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEE 130
+ E
Sbjct: 144 LFKESE 149
>gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Length = 303
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 57 ACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIAN 116
A L P+ +T P LFVS L++ +SE ++ F+ +G + V+LV D++ N
Sbjct: 11 AAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTN 70
Query: 117 RPRGFAFLRYATEEESRRAIEGMHGKVCCC--FWM 149
+P+G+AF+ Y + + A + K FW+
Sbjct: 71 KPKGYAFIEYMHTRDMKAAYKQADDKRLTAEEFWL 105
>gi|359490617|ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-like [Vitis vinifera]
Length = 218
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA---NRPRGFAFL 124
P+SL+ + + RLF+ L R SE +L F FG++V + + PRGFAF+
Sbjct: 51 PNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPRGFAFV 110
Query: 125 RYATEEESRRAIEGMHGKVCC 145
++T+EE+ A E MHGK+ C
Sbjct: 111 EFSTKEEAELAKEKMHGKLIC 131
>gi|346322586|gb|EGX92185.1| glycine-rich RNA-binding protein [Cordyceps militaris CM01]
Length = 182
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY + +++ AI
Sbjct: 2 AKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQDADAQSAIA 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+ +ED L + F +G + VNL D+ RPRGFAF+ TE++ AIE +
Sbjct: 3 IYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEAL 62
Query: 140 HGKVCCCFWMA 150
G WM
Sbjct: 63 DG----AEWMG 69
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|13124487|sp|Q9JJ54.1|HNRPD_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|9588096|dbj|BAB03465.1| RNA binding protein p45AUF1 [Rattus norvegicus]
Length = 353
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 167 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 226
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 227 TFKEEEPVKKIMEKKYHNV 245
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+
Sbjct: 82 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFV 141
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 142 LFKESESVDKVMDQKEHKLNGKV 164
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 170 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 229
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 230 TFKEEEPVKKIME 242
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 85 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 144
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 145 LFKESESVDKVMDQKEHKLNGKV 167
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|359489218|ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product [Vitis vinifera]
Length = 812
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV GL +ED LR F G++ EV L+M+ + +GFAFLR+AT E+++RA+ +
Sbjct: 234 VFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTEL 293
Query: 140 -----HGKVC 144
+GK C
Sbjct: 294 KNPVVNGKQC 303
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 229 TFKEEEPVKKIMEKKYHNV 247
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 161 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 220
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 221 TFKEEEPVKKIME 233
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 76 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 135
Query: 125 RYATEE 130
+ E
Sbjct: 136 LFKESE 141
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F+ +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 18 LLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 140 HGKVC 144
G+V
Sbjct: 78 DGRVV 82
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 345 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNA 404
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 405 DDAKKALEQLNG 416
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK+ RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 327 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 386
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 387 DDAKKALEQLNG 398
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS+ T+ED LRN F FG + ++ D+ +GF F+ T+EE+ AI G
Sbjct: 4 KLYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAIAG 63
Query: 139 MHGK 142
+G+
Sbjct: 64 TNGR 67
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|127138710|ref|NP_077380.2| heterogeneous nuclear ribonucleoprotein D0 isoform a [Rattus
norvegicus]
gi|149046816|gb|EDL99590.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Rattus
norvegicus]
Length = 353
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 167 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 226
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 227 TFKEEEPVKKIME 239
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+
Sbjct: 82 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFV 141
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 142 LFKESESVDKVMDQKEHKLNGKV 164
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 40/58 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+++V L + T++DSLRNAFQ +GQ+++ ++ D+ R RGF F+ + + +E+ AI
Sbjct: 4 KVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAI 61
>gi|260804435|ref|XP_002597093.1| hypothetical protein BRAFLDRAFT_215789 [Branchiostoma floridae]
gi|229282356|gb|EEN53105.1| hypothetical protein BRAFLDRAFT_215789 [Branchiostoma floridae]
Length = 113
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA-- 135
T++FV GL + T++DSLR+ FQ FG++ E ++ D+ + RG+ F+ AT E + +A
Sbjct: 8 TKIFVGGLPYHTTDDSLRSFFQTFGEIEEAVVITDRQTGKSRGYGFVTMATREAAEKACK 67
Query: 136 -----IEGMHGKVCCCFWMAE 151
I+G V + A+
Sbjct: 68 DPNPIIDGRKANVNLAYIGAK 88
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV L F ++E+ L F +G L E++ +D++ +P+GFAF+ Y E + +A
Sbjct: 415 RLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYAE 474
Query: 139 MHGKV 143
M G+V
Sbjct: 475 MDGQV 479
>gi|157129095|ref|XP_001661605.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872353|gb|EAT36578.1| AAEL011340-PA [Aedes aegypti]
Length = 186
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ + +T P LFV+ +++ TSE LR F+ +G++V++ ++ DK +PRG
Sbjct: 85 IATWDPNQLAEATQDPFKTLFVARINYDTSESKLRREFETYGKIVKIIIIHDKETGKPRG 144
Query: 121 FAFLRYATEEE----SRRAIEGMHGKVCC 145
+AF+ Y E + + + EG G V
Sbjct: 145 YAFIEYEHERDMHWLNLKWAEGPGGTVTL 173
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEE 130
+ E
Sbjct: 144 LFKESE 149
>gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus]
Length = 304
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 167 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 226
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 227 TFKEEEPVKKIME 239
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+
Sbjct: 82 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFV 141
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 142 LFKESESVDKVMDQKEHKLNGKV 164
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 170 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 229
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 230 TFKEEEPVKKIME 242
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 85 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 144
Query: 125 RYATEE 130
+ E
Sbjct: 145 LFKESE 150
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 229 TFKEEEPVKKIMEKKYHNV 247
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|356536336|ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776333 [Glycine max]
Length = 279
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + R+FV GLS+ +E L +AF +G+++E ++M++ RPRGF F+ +A
Sbjct: 2 AAKEENRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRGM 61
Query: 133 RRAIEGMHGK 142
AI+ MHG+
Sbjct: 62 EDAIKEMHGR 71
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 332 QPKAHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNA 391
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 392 DDAKKALEQLNG 403
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
++LF+ GLS+ + SLR+AF +G +VE ++ D+ R RGF F+ + +EE + A
Sbjct: 9 SSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEESATSA 68
Query: 136 IEGMHGK 142
+ M G+
Sbjct: 69 LS-MDGQ 74
>gi|255537972|ref|XP_002510051.1| DAZ-associated protein, putative [Ricinus communis]
gi|223550752|gb|EEF52238.1| DAZ-associated protein, putative [Ricinus communis]
Length = 370
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++FV GLS +E+ ++ F+ FG++V+V ++ D NRPRGF F+ + +E+ +A+E
Sbjct: 126 KIFVGGLSSSLTEEQFKDYFESFGKIVDVVVMQDSSTNRPRGFGFVTFDSEDSVDKAME 184
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
K ++FV G+S TSED+LR F +G + + DKI RGF F+ ++ +A+
Sbjct: 5 KAKIFVGGISRDTSEDALRVHFSKYGTVSGSLVAKDKITKNSRGFGFVWFSDSAFVDKAL 64
Query: 137 EGMH 140
+ H
Sbjct: 65 QDSH 68
>gi|18415425|ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|51971865|dbj|BAD44597.1| putative protein [Arabidopsis thaliana]
gi|107738041|gb|ABF83619.1| At4g20030 [Arabidopsis thaliana]
gi|332658864|gb|AEE84264.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 152
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++ V L F TSED L+ F FG++ EV L+ D+ R +G+AF+++ +++++ AIE
Sbjct: 40 SKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIE 99
Query: 138 GMHGKV 143
M ++
Sbjct: 100 TMDRRM 105
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F +G + E +V D +R RGF F+R+A++ E+ A+
Sbjct: 2 SKLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMN 61
Query: 138 GMHGK 142
M+ +
Sbjct: 62 AMNNQ 66
>gi|156087831|ref|XP_001611322.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798576|gb|EDO07754.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 98
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 43/62 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+ V+G+ E+ +R+AF+GFGQ+ ++L MD+ + +G+AF+ ++ ++E+R AI M
Sbjct: 16 IIVTGVHPEAQEEDIRDAFEGFGQITSIHLNMDRRSGYAKGYAFIEFSEQQEARSAITEM 75
Query: 140 HG 141
+G
Sbjct: 76 NG 77
>gi|127139464|ref|NP_001076009.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Rattus
norvegicus]
gi|149046817|gb|EDL99591.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Rattus
norvegicus]
Length = 304
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 167 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 226
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 227 TFKEEEPVKKIME 239
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG +V+ L +D I R RGF F+
Sbjct: 82 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFV 141
Query: 125 RYATEE 130
+ E
Sbjct: 142 LFKESE 147
>gi|395834191|ref|XP_003790095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Otolemur garnettii]
Length = 306
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEE 130
+ E
Sbjct: 144 LFKESE 149
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 246 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPXTGRSKGYGFLTFRNADDAKKALEQ 305
Query: 139 MHG 141
++G
Sbjct: 306 LNG 308
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEE 130
+ E
Sbjct: 144 LFKESE 149
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 43/67 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P LF+ GL++ +ED + NAF FG++ V L + + RP+GF ++ + +++ + +A
Sbjct: 493 PSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKA 552
Query: 136 IEGMHGK 142
+E M+G+
Sbjct: 553 LETMNGQ 559
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L+V LS+ D L++ F+ +G +++ + D+ + R RGF ++ +AT E+ RA +
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 140 HGK 142
HGK
Sbjct: 456 HGK 458
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 144 LFKESESVDKVMDQKEHKLNGKV 166
>gi|312088239|ref|XP_003145783.1| hypothetical protein LOAG_10208 [Loa loa]
Length = 353
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ + +T P LFV+ +++ TSE LR F+ FG++ + LV DK +PRG
Sbjct: 127 IATWSPAQNPSATVDPYKTLFVARINYETSESKLRREFEQFGKITRLALVHDK-NGKPRG 185
Query: 121 FAFLRYATEE---ESRRAIEGM 139
+AF+ Y +E E+ + +GM
Sbjct: 186 YAFIEYQHKESMSEAYKKADGM 207
>gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana]
Length = 152
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++ V L F TSED L+ F FG++ EV L+ D+ R +G+AF+++ +++++ AIE
Sbjct: 40 SKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIE 99
Query: 138 GMHGKV 143
M ++
Sbjct: 100 TMDRRM 105
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F+ +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 18 LLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 140 HGKVC 144
G+V
Sbjct: 78 DGRVV 82
>gi|197308346|gb|ACH60524.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308348|gb|ACH60525.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308350|gb|ACH60526.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308352|gb|ACH60527.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308354|gb|ACH60528.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308356|gb|ACH60529.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308358|gb|ACH60530.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308362|gb|ACH60532.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308364|gb|ACH60533.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308366|gb|ACH60534.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308368|gb|ACH60535.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308370|gb|ACH60536.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308372|gb|ACH60537.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308374|gb|ACH60538.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308376|gb|ACH60539.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308378|gb|ACH60540.1| glycine-rich RNA-binding protein [Pseudotsuga macrocarpa]
Length = 71
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL+ AF +G++VE ++ D+ R RGF F+ + E+
Sbjct: 1 MAAADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQ 60
Query: 131 ESRRAIEGMHG 141
R AI+ M+G
Sbjct: 61 SMRDAIDAMNG 71
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRG-RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFR 88
P P ++R+ + LR +G A L P+ +T P LFVS L++
Sbjct: 91 PKPEVELPSQKRE--RIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYE 148
Query: 89 TSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
+SE ++ F+ +G + V+LV D++ N+P+G+AF+ Y
Sbjct: 149 SSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEY 186
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|328708038|ref|XP_001949057.2| PREDICTED: hypothetical protein LOC100160789 [Acyrthosiphon pisum]
Length = 401
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+LF+ GL + +EDSLRN F+ +G++V+V ++ D I R RGF F+ Y+ RA+
Sbjct: 20 KLFIGGLDYSATEDSLRNTFEVWGEIVDVVVIKDPITKRSRGFGFVIYSKSSMVDRAM 77
>gi|302804260|ref|XP_002983882.1| hypothetical protein SELMODRAFT_27842 [Selaginella moellendorffii]
gi|300148234|gb|EFJ14894.1| hypothetical protein SELMODRAFT_27842 [Selaginella moellendorffii]
Length = 146
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-RGFAFLRY 126
S S Q + +L++ GLS+ TS ++L N F +G++ E + DK N+ RGFAF+ Y
Sbjct: 68 SESRSADQAQRKLYIGGLSYETSNETLLNIFSQYGEIEEGAVAYDKNTNKSRRGFAFITY 127
Query: 127 ATEEESRRAIE 137
+ E +R+AI+
Sbjct: 128 KSVEAARKAID 138
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GL++ T+ +LR+AFQ +G++ E ++ DK + RGF F+ + + ++RA++
Sbjct: 1 KLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALK 59
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T++ L F+ FG ++E +++DK RGF F+ + E AIE
Sbjct: 8 RCFVGGLSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMEEAIER 67
Query: 139 MHGK 142
+HGK
Sbjct: 68 LHGK 71
>gi|449525794|ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231499 [Cucumis sativus]
Length = 266
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T ++++R+ F FG+++E ++ DK+ R +G+ F+ + E +++A E
Sbjct: 26 TKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACE 85
>gi|449451717|ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202850 [Cucumis sativus]
Length = 266
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T ++++R+ F FG+++E ++ DK+ R +G+ F+ + E +++A E
Sbjct: 26 TKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACE 85
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L + +EDSLR F+ FG + +V+D+I+ R +GFAF+ + +EE AIE +
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+T L+V+ L +E + + F +G +V+ N++ DKI PRG AF+R+ EE++ AI
Sbjct: 198 ETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKITGLPRGVAFVRFDKREEAQEAI 257
Query: 137 EGMHGKV 143
+HG +
Sbjct: 258 ARLHGTI 264
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+ PS S + P LFV ++F TSE LR F+ +G + +N+V D + +PRG
Sbjct: 85 IETWDPSNDSKISGDPFKTLFVGRINFDTSEGKLRREFESYGPVKRINIVSDPKSGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGK 142
+AF+ Y E + A + GK
Sbjct: 145 YAFVEYENERDMHSAYKYADGK 166
>gi|195041825|ref|XP_001991324.1| GH12116 [Drosophila grimshawi]
gi|193901082|gb|EDV99948.1| GH12116 [Drosophila grimshawi]
Length = 918
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V LS ++D L F FG +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 269 TNLYVINLSRNINDDQLDRIFSPFGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIM 328
Query: 138 GMHGKV 143
++ V
Sbjct: 329 ALNNTV 334
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|58332392|ref|NP_001011015.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|82234092|sp|Q640A2.1|HNRDL_XENTR RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|52139122|gb|AAH82729.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|89268223|emb|CAJ82429.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS T+E+ ++ F GFG++ + L MD N RGF F+
Sbjct: 98 PKRAKALKGKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFV 157
Query: 125 RYATEEESRRAIE 137
Y EE ++ +E
Sbjct: 158 TYTGEEPVKKLLE 170
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q + ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 23 QDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 72
>gi|356575516|ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
Length = 279
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GLS+ +E L +AF +G+++E ++M++ RPRGF F+ +A
Sbjct: 4 KEENRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRGMED 63
Query: 135 AIEGMHGK 142
AI+ MHG+
Sbjct: 64 AIKEMHGR 71
>gi|255645278|gb|ACU23136.1| unknown [Glycine max]
Length = 279
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GLS+ +E L +AF +G+++E ++M++ RPRGF F+ +A
Sbjct: 4 KEENRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFADRRGMED 63
Query: 135 AIEGMHGK 142
AI+ MHG+
Sbjct: 64 AIKEMHGR 71
>gi|148230364|ref|NP_001091533.1| heterogeneous nuclear ribonucleoprotein D0 [Bos taurus]
gi|146231918|gb|ABQ13034.1| heterogeneous nuclear ribonucleoprotein D [Bos taurus]
gi|296486390|tpg|DAA28503.1| TPA: heterogeneous nuclear ribonucleoprotein D [Bos taurus]
Length = 306
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MD N+ RGF F+
Sbjct: 169 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
Query: 125 RYATEEESRRAIE 137
+ EE ++ +E
Sbjct: 229 TFKEEEPVKKIME 241
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 84 PRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Query: 125 RYATEE 130
+ E
Sbjct: 144 LFKESE 149
>gi|390345173|ref|XP_003726279.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Strongylocentrotus purpuratus]
Length = 601
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 155 RVYVGSISFELKEDTIRQAFHPFGPIKSINMSWDPITMKHKGFAFVEYDLPEAAQLALEQ 214
Query: 139 MHG 141
M+G
Sbjct: 215 MNG 217
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 54 GRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
GR + P A P + + + R+F++ + S + +++ F+ FG+++ +L D
Sbjct: 228 GRPSNMPQA-QPVVDAIMEEAKHQPRIFITSIHSDLSSEDIKSVFEAFGKIISCSLPSDS 286
Query: 114 IANRPRGFAFLRYATEEESRRAIEGMH 140
+ + +G + Y + + + AI M+
Sbjct: 287 VGGKHKGHGIIEYDSMQSASDAISSMN 313
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R + V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 9 SGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 129 EEESRRAIEGMHG 141
E+E+R AI+G+ G
Sbjct: 69 EDEARDAIDGLDG 81
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL F T E SL AF +G + +V++V D+ R RGF F+ + E+++ A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MAAMNGK 69
>gi|449432380|ref|XP_004133977.1| PREDICTED: uncharacterized protein LOC101208921 [Cucumis sativus]
Length = 788
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV GL E+ L+ F G++ EV L+M+ + +GFAFLR+AT EE++RA+ +
Sbjct: 232 VFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSEL 291
Query: 140 -----HGKVC 144
+GK C
Sbjct: 292 KNPVINGKQC 301
>gi|195135155|ref|XP_002012000.1| GI16722 [Drosophila mojavensis]
gi|193918264|gb|EDW17131.1| GI16722 [Drosophila mojavensis]
Length = 616
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 110 RVYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 169
Query: 139 MHGKV 143
M+G +
Sbjct: 170 MNGAL 174
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SED +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 207 RIYVASIHPDLSEDDIKSVFEAFGPILYCKLAQGTSVHTHKGYGFIEYANKQAMDEAIAS 266
Query: 139 MH 140
M+
Sbjct: 267 MN 268
>gi|449519174|ref|XP_004166610.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101228505 [Cucumis sativus]
Length = 788
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV GL E+ L+ F G++ EV L+M+ + +GFAFLR+AT EE++RA+ +
Sbjct: 232 VFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSEL 291
Query: 140 -----HGKVC 144
+GK C
Sbjct: 292 KNPVINGKQC 301
>gi|328774055|gb|EGF84092.1| hypothetical protein BATDEDRAFT_84811 [Batrachochytrium
dendrobatidis JAM81]
Length = 158
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 70 SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
S S + +LF+ L++ E +L NAF G+L+E N+ D+ + R RGFAF+ + +
Sbjct: 27 STSAISLEKKLFIGNLAWSVDEQTLANAFAVHGELIECNIARDRESGRARGFAFVTFQDD 86
Query: 130 EESRRAIEGMHG 141
+ + +AIE ++G
Sbjct: 87 DAALKAIEALNG 98
>gi|260796311|ref|XP_002593148.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|260796325|ref|XP_002593155.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
gi|229278372|gb|EEN49159.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|229278379|gb|EEN49166.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
Length = 88
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV+GL+ T+E +L F +G++VEV L+ DKI R RGF F+ + ++ A++
Sbjct: 9 KIFVAGLNLETNETTLEKLFNKYGKIVEVLLMKDKITARSRGFGFITFENPRDAEVAVKE 68
Query: 139 MHGK 142
M+G+
Sbjct: 69 MNGQ 72
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 75 QPKT-----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 350 QPKAHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 409
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 410 DDAKKALEQLNG 421
>gi|25152876|ref|NP_498565.2| Protein RNP-7 [Caenorhabditis elegans]
gi|351065637|emb|CCD61618.1| Protein RNP-7 [Caenorhabditis elegans]
Length = 332
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 39 KRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAF 98
KRR D L + + +G +A P+ + ++ P LFV +++ TSE LR F
Sbjct: 71 KRRQKDELLAYKVEQG------IATWNPAENPRASEDPYRTLFVGRINYETSESKLRREF 124
Query: 99 QGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHG 141
+ +G++ ++ +V D+ A +PRG+AF+ Y+ + E A + G
Sbjct: 125 EAYGKIKKLTMVHDE-AGKPRGYAFIEYSDKAEMHTAYKKADG 166
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R + V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 9 SGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 129 EEESRRAIEGMHG 141
E+E+R AI+G+ G
Sbjct: 69 EDEARDAIDGLDG 81
>gi|157129097|ref|XP_001661606.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872354|gb|EAT36579.1| AAEL011340-PB [Aedes aegypti]
Length = 189
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ + +T P LFV+ +++ TSE LR F+ +G++V++ ++ DK +PRG
Sbjct: 85 IATWDPNQLAEATQDPFKTLFVARINYDTSESKLRREFETYGKIVKIIIIHDKETGKPRG 144
Query: 121 FAFLRYATEEE 131
+AF+ Y E +
Sbjct: 145 YAFIEYEHERD 155
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|357627216|gb|EHJ76977.1| hypothetical protein KGM_19833 [Danaus plexippus]
Length = 392
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ ++ +T P LFV+ +++ TSE LR F+G+G + ++++V K +PRG
Sbjct: 85 IALWDPTTNAKATGDPFKTLFVARVNYDTSESKLRREFEGYGPIKKIHMVYSKENGKPRG 144
Query: 121 FAFLRYATEEE 131
+AF+ Y E +
Sbjct: 145 YAFIEYEHERD 155
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E AIE
Sbjct: 83 TPLPSGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 142
Query: 138 GMHGK 142
M+GK
Sbjct: 143 NMNGK 147
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 133 RVYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 192
Query: 139 MHGKV 143
M+G +
Sbjct: 193 MNGAL 197
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SED +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 230 RIYVASIHPDLSEDDIKSVFEAFGPILYCKLAQGSSVHTHKGYGFIEYANKQAMDEAIAS 289
Query: 139 MH 140
M+
Sbjct: 290 MN 291
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRG-RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFR 88
P P ++R+ + LR +G A L P+ +T P LFVS L++
Sbjct: 91 PKPEVELPSQKRE--RIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYE 148
Query: 89 TSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
+SE ++ F+ +G + V+LV D++ N+P+G+AF+ Y
Sbjct: 149 SSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEY 186
>gi|390345175|ref|XP_785572.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Strongylocentrotus purpuratus]
Length = 574
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 112 RVYVGSISFELKEDTIRQAFHPFGPIKSINMSWDPITMKHKGFAFVEYDLPEAAQLALEQ 171
Query: 139 MHG 141
M+G
Sbjct: 172 MNG 174
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 54 GRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
GR + P A P + + + R+F++ + S + +++ F+ FG+++ +L D
Sbjct: 185 GRPSNMPQA-QPVVDAIMEEAKHQPRIFITSIHSDLSSEDIKSVFEAFGKIISCSLPSDS 243
Query: 114 IANRPRGFAFLRYATEEESRRAIEGMH 140
+ + +G + Y + + + AI M+
Sbjct: 244 VGGKHKGHGIIEYDSMQSASDAISSMN 270
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GL+F T+ED L AF +G++ EV +V D+ R RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MMAMNGK 69
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 62 ACLPPSPHS---LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
A LPP P + ++F+ GL++ T+ED LRN F +G ++E+ ++ D R
Sbjct: 178 AMLPPQPQQNVKADISKDSCKMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRS 237
Query: 119 RGFAFLRYATEEESRRAIEGMH---GKV 143
RGF FL + ++ H GKV
Sbjct: 238 RGFGFLTFEHPSSVDEVVKTQHILDGKV 265
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++FV G+ F FG +++ L++DK R RGF F+ Y + +
Sbjct: 282 KIFVGGIGTDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITYDSAD 333
>gi|195347606|ref|XP_002040343.1| GM19131 [Drosophila sechellia]
gi|194121771|gb|EDW43814.1| GM19131 [Drosophila sechellia]
Length = 488
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V LS ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI+
Sbjct: 179 TNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 238
Query: 138 GMHGKV 143
++ V
Sbjct: 239 ALNNTV 244
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 53 RGRGACFPLA-CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVM 111
R R C PL P ++S+ + K LFV GL+F T E +L + F FG + EV +V
Sbjct: 7 RARRLCRPLTFNFQDLPSAMSSEEGK--LFVGGLNFNTDEQALEDHFSSFGPISEVVVVK 64
Query: 112 DKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
D+ R RGF F+ + E + A+ M+G+
Sbjct: 65 DRETQRSRGFGFITFTNPEHASDAMRAMNGE 95
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV GLS+ T+E +L AF +G+++E +V+++ R RGF F+ ++ AI G
Sbjct: 8 RIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 139 MH 140
MH
Sbjct: 68 MH 69
>gi|30689357|ref|NP_850395.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
gi|18252907|gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|21389635|gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|330255163|gb|AEC10257.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
Length = 333
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 58 CFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANR 117
C+ PS S + P LFV LS T+ED+LR +G++ + LV +
Sbjct: 44 CYNAGLYDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGA 103
Query: 118 PRGFAFLRYATEEESRRAIEGMH 140
RG+ F+ Y TE+E RA E H
Sbjct: 104 SRGYGFVEYETEKEMLRAYEDAH 126
>gi|427794969|gb|JAA62936.1| Putative polypyrimidine tract-binding protein puf60 rrm
superfamily, partial [Rhipicephalus pulchellus]
Length = 416
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED+++ AF+ FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 155 RVYVGSISFELKEDTIKQAFRPFGPIKSINMSWDPVTQKHKGFAFVEYELPEAAQLALEQ 214
Query: 139 MHG 141
M+G
Sbjct: 215 MNG 217
>gi|317152544|ref|YP_004120592.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942795|gb|ADU61846.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS+ ++ED +R AF+ +G++ VNL+ D+ RPRGF F+ + +R AI
Sbjct: 4 KLYVGNLSWSSTEDDVRAAFEAYGEVTSVNLIEDRETGRPRGFGFVEM-DDAGAREAIAA 62
Query: 139 MHGK 142
+ GK
Sbjct: 63 LDGK 66
>gi|78356222|ref|YP_387671.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218627|gb|ABB37976.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 114
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS++ SED LR AF+ FG + +V ++ D R +GF F+ A + E+ AIE +
Sbjct: 3 IYVGNLSYQMSEDDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIEAL 62
Query: 140 HGK 142
+G+
Sbjct: 63 NGR 65
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+ + L+N F +G++ +V DK NR +GF F+ AT+EE++ AIE +
Sbjct: 3 IYVGNLSWNLKDQDLQNLFAPYGEVTSAKIVSDKFTNRSKGFGFVEMATDEEAKAAIEAL 62
Query: 140 HG 141
+G
Sbjct: 63 NG 64
>gi|357120047|ref|XP_003561742.1| PREDICTED: uncharacterized protein LOC100843530 [Brachypodium
distachyon]
Length = 307
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 40/60 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T +D+LR F+ FG ++E ++ DK+ R +G+ F+ + + +++A E
Sbjct: 20 TKVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 79
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 72 STCQPKT---RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
STC+ + +LF+ G+S+ T+ED LR FQ FG +VE ++ D+ R RGF F+ +A
Sbjct: 36 STCRVEMDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFAD 95
Query: 129 EEESRRAIEGMH 140
+ R + H
Sbjct: 96 PSVAERVVMEKH 107
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 41 RDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQG 100
RD ++F+ G+ P+P + T ++FV GL+ +E +N F
Sbjct: 122 RDDQNVFTRSNSSSHGS--------PAPTPIRT----KKIFVGGLASTVTESDFKNYFDQ 169
Query: 101 FGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
FG + +V ++ D RPRGF F+ Y +EE + +
Sbjct: 170 FGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVL 205
>gi|148235301|ref|NP_001084608.1| heterogeneous nuclear ribonucleoprotein D-like-B [Xenopus laevis]
gi|82237179|sp|Q6NU14.1|HNDLB_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-B;
Short=hnRNP D-like B; Short=hnRNP DL-B
gi|46249880|gb|AAH68788.1| MGC81335 protein [Xenopus laevis]
Length = 291
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS T+E+ ++ F GFG++ + L MD N RGF F+
Sbjct: 106 PKRAKALQGKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFV 165
Query: 125 RYATEEESRRAIE 137
Y EE ++ +E
Sbjct: 166 TYTDEEPVQKLLE 178
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
++++F+ GLS+ TS+ L FG++++ + D + R RGF F+
Sbjct: 33 RSKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFV 80
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T ++L AF +G++V+ ++ D+ R RGF F+ +A E+ AIE
Sbjct: 7 RCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEA 66
Query: 139 MHGK 142
M+G+
Sbjct: 67 MNGQ 70
>gi|115452347|ref|NP_001049774.1| Os03g0286500 [Oryza sativa Japonica Group]
gi|108707565|gb|ABF95360.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548245|dbj|BAF11688.1| Os03g0286500 [Oryza sativa Japonica Group]
Length = 310
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 40/60 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T +D+LR F+ FG ++E ++ DK+ R +G+ F+ + + +++A E
Sbjct: 33 TKVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 92
>gi|167521049|ref|XP_001744863.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776477|gb|EDQ90096.1| predicted protein [Monosiga brevicollis MX1]
Length = 307
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
K L+V GL+ +E+ LR+AF FG ++E+ L +D +GFAF+ YAT E++ AI
Sbjct: 7 KRMLYVGGLAEEVTEEVLRDAFVPFGDILELQLPLDFQTQDHKGFAFIEYATLEDAEAAI 66
Query: 137 EGMH 140
+ MH
Sbjct: 67 DNMH 70
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T++ SL AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEK 60
Query: 131 ESRRAIEGMHGKV 143
+ AI GM+G+
Sbjct: 61 SMKDAIVGMNGQT 73
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 42/64 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L++ L + E L + F +G +V+V+++ D+ RPRGFAF+ + +EE++ AI+G
Sbjct: 6 KLYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAIDG 65
Query: 139 MHGK 142
+G+
Sbjct: 66 CNGQ 69
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 144 RVYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 203
Query: 139 MHGKV 143
M+G +
Sbjct: 204 MNGAL 208
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SED +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 241 RIYVASIHPDLSEDDIKSVFEAFGPILYCKLAQGTSVHTHKGYGFIEYANKQAMDEAIAS 300
Query: 139 MH 140
M+
Sbjct: 301 MN 302
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GL+F T+ED L AF +G++ EV +V D+ R RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62
Query: 136 IEGMHGK 142
+ M+GK
Sbjct: 63 MMAMNGK 69
>gi|449433509|ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
gi|449490646|ref|XP_004158665.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
Length = 158
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL V L + T+E L+ F FG++ EV L D+ RP+G+AF++Y ++++ A+E
Sbjct: 45 SRLMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDAMLALE 104
Query: 138 GMHGKV 143
M K+
Sbjct: 105 TMDCKI 110
>gi|242025166|ref|XP_002432997.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518506|gb|EEB20259.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 211
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L +E L N F +G +V+ N++ DK+ PRG AF+RY +EE++ AI
Sbjct: 104 TNLYVTNLPKNITEQELDNIFGPYGFIVQKNILKDKVTGMPRGVAFVRYDKKEEAQAAIS 163
Query: 138 GMHGKV 143
++G V
Sbjct: 164 NLNGVV 169
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
+ C KT L ++ L ++ L + F G + ++ D GF F++Y EE+
Sbjct: 12 NDCDDKTNLIINYLPQHMTDKELYSMFVTIGPVQSCRVMKDFKTGYSYGFGFVKYCKEED 71
Query: 132 SRRAIEGMHG 141
+ RAI ++G
Sbjct: 72 ASRAIGTLNG 81
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T++ L F+ FG ++E +++DK RGF F+ + E AIE
Sbjct: 8 RCFVGGLSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMDEAIER 67
Query: 139 MHGK 142
+HGK
Sbjct: 68 LHGK 71
>gi|443719882|gb|ELU09834.1| hypothetical protein CAPTEDRAFT_172934 [Capitella teleta]
Length = 635
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V ++F ED+++ AF FG + VNL D I N+ +GFAF+ Y E ++ ++E
Sbjct: 146 RIYVGSINFEIKEDTIKQAFLPFGPIKSVNLSWDPITNKHKGFAFIEYDIPEAAQLSLEQ 205
Query: 139 MHG 141
M+G
Sbjct: 206 MNG 208
>gi|442615389|ref|NP_001259304.1| Sex lethal, isoform Y [Drosophila melanogaster]
gi|440216504|gb|AGB95149.1| Sex lethal, isoform Y [Drosophila melanogaster]
Length = 708
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 210 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 269
Query: 137 EGMHGKV 143
++ +
Sbjct: 270 SALNNVI 276
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 44/63 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TRL++ L++ +++SL+ AF+ FG + + +V D+ + R +GF F+ + +E++++AIE
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 138 GMH 140
M+
Sbjct: 62 EMN 64
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R L V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 7 SGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 66
Query: 129 EEESRRAIEGMHG 141
E+E++ AI+G+ G
Sbjct: 67 EDEAQDAIDGLDG 79
>gi|194896665|ref|XP_001978518.1| GG17637 [Drosophila erecta]
gi|195480535|ref|XP_002101294.1| GE17544 [Drosophila yakuba]
gi|190650167|gb|EDV47445.1| GG17637 [Drosophila erecta]
gi|194188818|gb|EDX02402.1| GE17544 [Drosophila yakuba]
Length = 335
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 170 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 229
Query: 137 EGMHGKV 143
++ +
Sbjct: 230 SALNNVI 236
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGK 142
+ AIEGM+G+
Sbjct: 61 AMKDAIEGMNGQ 72
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGK 142
+ AIEGM+G+
Sbjct: 61 AMKDAIEGMNGQ 72
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGK 142
+ AIEGM+G+
Sbjct: 61 AMKDAIEGMNGQ 72
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGK 142
+ AIEGM+G+
Sbjct: 61 AMKDAIEGMNGQ 72
>gi|442615387|ref|NP_001259303.1| Sex lethal, isoform X [Drosophila melanogaster]
gi|440216503|gb|AGB95148.1| Sex lethal, isoform X [Drosophila melanogaster]
Length = 722
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 202 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 261
Query: 137 EGMHGKV 143
++ +
Sbjct: 262 SALNNVI 268
>gi|358391693|gb|EHK41097.1| hypothetical protein TRIATDRAFT_301780 [Trichoderma atroviride IMI
206040]
Length = 171
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+R+ E +++ AI+
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRFVQEADAQAAID 61
Query: 138 GMH 140
M+
Sbjct: 62 AMN 64
>gi|281359985|ref|NP_001162689.1| Sex lethal, isoform AB [Drosophila melanogaster]
gi|272506012|gb|ACZ95225.1| Sex lethal, isoform AB [Drosophila melanogaster]
Length = 322
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 179 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 238
Query: 138 GMHGKV 143
++ +
Sbjct: 239 ALNNVI 244
>gi|78710141|ref|NP_727163.2| Sex lethal, isoform E [Drosophila melanogaster]
gi|78710163|ref|NP_727165.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|45446831|gb|AAO41638.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|71854536|gb|AAZ52512.1| Sex lethal, isoform E [Drosophila melanogaster]
Length = 314
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 171 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 230
Query: 138 GMHGKV 143
++ +
Sbjct: 231 ALNNVI 236
>gi|224067534|ref|XP_002302501.1| predicted protein [Populus trichocarpa]
gi|222844227|gb|EEE81774.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV GL +ED LR F G++ EV L+M+ + +GFAFLR+AT E+++RA+ +
Sbjct: 34 VFVGGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTEL 93
Query: 140 -----HGKVC 144
+GK C
Sbjct: 94 KNPVINGKQC 103
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P RL+V + F +ED L N F+ FG+L V L D+ R +G+AF+++A E++R A
Sbjct: 263 PFHRLYVGNVHFSITEDDLTNVFEPFGELEFVQLQKDE-TGRSKGYAFVQFANPEQARDA 321
Query: 136 IEGMHG 141
+E M+G
Sbjct: 322 LEKMNG 327
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 174 RVYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 233
Query: 139 MHG 141
M+G
Sbjct: 234 MNG 236
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 34/62 (54%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +E+ +++ F+ FG + + A+ +G+AF+ Y T + + AI
Sbjct: 271 RIYIASIHPDLTEEDIKSVFEAFGAIATCKMSQGSSAHSHKGYAFIEYQTNQSAIEAIAS 330
Query: 139 MH 140
M+
Sbjct: 331 MN 332
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+ + + R FV GL++ T +L AF FG++ + ++ D+ R RGF F+ +A E+
Sbjct: 1 MGSSDVEYRCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEK 60
Query: 131 ESRRAIEGMHGK 142
R AIE M+G+
Sbjct: 61 SMRDAIEEMNGQ 72
>gi|449458854|ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ G+S+ TSED L++ F +G+++ ++ DKI +RPRGF F+ ++ R ++
Sbjct: 7 KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
Query: 139 MH 140
H
Sbjct: 67 KH 68
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
++FV GL +E+ + F+ +G + +V ++ D+ RPRGF F+ + TEE R +
Sbjct: 112 KIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVL 169
>gi|432110138|gb|ELK33915.1| Putative RNA-binding protein 3 [Myotis davidii]
Length = 123
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E + A+
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 139 MHGKVC 144
M+G+V
Sbjct: 67 MNGEVV 72
>gi|356558254|ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV + T+++ L+ F FG + + +L +D I RP+GF F+ + +E E+ +A+
Sbjct: 7 TKLFVHRIMLYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKALR 66
Query: 138 GMHGKVCC 145
M+G++
Sbjct: 67 AMNGRIVS 74
>gi|194763555|ref|XP_001963898.1| GF21012 [Drosophila ananassae]
gi|190618823|gb|EDV34347.1| GF21012 [Drosophila ananassae]
Length = 757
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V L ++ L F FGQ+V+ N++ DK+ RPRG AF+RY EE++ AI+
Sbjct: 194 TNLYVINLPRNINDAMLDRIFSAFGQIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 253
Query: 138 GMHGKV 143
++ V
Sbjct: 254 TLNNTV 259
>gi|76096336|ref|NP_001028868.1| heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
gi|123783017|sp|Q3SWU3.1|HNRDL_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|74356265|gb|AAI04684.1| Heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
Length = 322
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 123 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 182
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 183 TYTDEEPVKKLLESRYHQI 201
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
AC P P S T ++F+ GLS+ TS+ L FG++V+ + D + R RGF
Sbjct: 38 AC-PLDPSSFPTS--GNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGF 94
Query: 122 AFLRYATEEESRRAIE 137
F+ + + +E
Sbjct: 95 GFVLFKDAASVDKVLE 110
>gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX
gi|4929889|pdb|1B7F|B Chain B, Sxl-Lethal ProteinRNA COMPLEX
Length = 168
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 90 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 149
Query: 138 GMHGKV 143
++ +
Sbjct: 150 ALNNVI 155
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS+ ++ L+ F +G +V ++MD+ R +GF F+ +++E++ AI G
Sbjct: 4 KLYVGNLSWGVTDAMLQEMFTPYGAVVSAQVIMDRDTGRSKGFGFVEMGSDQEAQAAISG 63
Query: 139 MHGKVC 144
MHG+V
Sbjct: 64 MHGQVI 69
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 187 RVYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 246
Query: 139 MHG 141
M+G
Sbjct: 247 MNG 249
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 35/62 (56%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +E+ +++ F+ FG +V + A+ +G+AF+ Y T + + AI
Sbjct: 284 RIYIASIHPDLTEEDIKSVFEAFGPIVTCKMSQGSAAHTHKGYAFIEYQTNQSAIEAIAS 343
Query: 139 MH 140
M+
Sbjct: 344 MN 345
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 137 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 196
Query: 139 MHG 141
M+G
Sbjct: 197 MNG 199
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +ED +++ F+ FG + L +R +G+ F+ Y T + + AI
Sbjct: 235 RIYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 294
Query: 139 MH 140
M+
Sbjct: 295 MN 296
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++ SL AF+ FG++V+ ++ D+ R RGF F+ +A E AI+
Sbjct: 6 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 65
Query: 139 MHGK 142
M+GK
Sbjct: 66 MNGK 69
>gi|3255957|emb|CAA19655.1| EG:132E8.1 [Drosophila melanogaster]
Length = 485
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V LS ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI+
Sbjct: 179 TNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 238
Query: 138 GMHGKV 143
++ V
Sbjct: 239 ALNNTV 244
>gi|328696967|ref|XP_001951881.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 603
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF EDS++ AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 142 RVYVGSISFELKEDSIKQAFSPFGCIKSINMSWDPITQKHKGFAFVEYEIPEAAQLALEQ 201
Query: 139 MHG 141
M+G
Sbjct: 202 MNG 204
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + +ED +++ F+ FG + L NR RG+ F+ Y + + AI
Sbjct: 240 RIYVASIHPDLTEDDIKSVFEAFGPIRTCKLAQGSTPNRHRGYGFIEYEGRQAAIEAISS 299
Query: 139 MH 140
M+
Sbjct: 300 MN 301
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV +SF+T+E LR AF+ +G++ + ++ D+ + RGFAF+ +E++ +AI G+
Sbjct: 4 VFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIAGL 63
Query: 140 HG 141
+G
Sbjct: 64 NG 65
>gi|289803032|gb|ADD20766.1| RH41387p [Drosophila melanogaster]
Length = 322
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 179 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 238
Query: 138 GMHGKV 143
++ +
Sbjct: 239 ALNNVI 244
>gi|116199747|ref|XP_001225685.1| hypothetical protein CHGG_08029 [Chaetomium globosum CBS 148.51]
gi|88179308|gb|EAQ86776.1| hypothetical protein CHGG_08029 [Chaetomium globosum CBS 148.51]
Length = 105
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++++V LS+ T + SLR AF+ +G +V+ ++ D+ NR RGF F+ ++T EE+ AI
Sbjct: 4 SKVYVGNLSWSTDDMSLRTAFEAYGLVVDSIVMKDRDTNRSRGFGFVTFSTTEEAEAAIA 63
Query: 138 GMH 140
G+
Sbjct: 64 GLD 66
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 247 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 306
Query: 139 MHG 141
++G
Sbjct: 307 LNG 309
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++V LS+ T++DSL +AF FGQL + ++ D+ R RGF F+ +AT+ E+ AI
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIA 62
Query: 138 GMH 140
++
Sbjct: 63 ALN 65
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 270 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 329
Query: 139 MHG 141
++G
Sbjct: 330 LNG 332
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 248 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 307
Query: 139 MHG 141
++G
Sbjct: 308 LNG 310
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 248 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 307
Query: 139 MHG 141
++G
Sbjct: 308 LNG 310
>gi|281359983|ref|NP_001162688.1| Sex lethal, isoform R [Drosophila melanogaster]
gi|272506011|gb|ACZ95224.1| Sex lethal, isoform R [Drosophila melanogaster]
Length = 342
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 200 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 259
Query: 137 EGMHGKV 143
++ +
Sbjct: 260 SALNNVI 266
>gi|195353431|ref|XP_002043208.1| Sxl [Drosophila sechellia]
gi|194127306|gb|EDW49349.1| Sxl [Drosophila sechellia]
Length = 301
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 202 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 261
Query: 137 EGMHGKV 143
++ +
Sbjct: 262 SALNNVI 268
>gi|195996811|ref|XP_002108274.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
gi|190589050|gb|EDV29072.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
Length = 351
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TRL++ L + +ED LR F+ FG + VN++ D N +G+ F++Y + +RRA+E
Sbjct: 92 TRLYIGSLHYNINEDMLRAIFEPFGLVENVNIIRDSDTNVSKGYGFIQYKEPDSARRALE 151
Query: 138 GMHG 141
++G
Sbjct: 152 QLNG 155
>gi|449533488|ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D-like [Cucumis sativus]
Length = 462
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ G+S+ TSED L++ F +G+++ ++ DKI +RPRGF F+ ++ R ++
Sbjct: 7 KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
Query: 139 MH 140
H
Sbjct: 67 KH 68
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ FV GL +E+ + F+ +G + +V ++ D+ RPRGF F+ + TEE R +
Sbjct: 112 KXFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVL 169
>gi|194747299|ref|XP_001956090.1| GF25032 [Drosophila ananassae]
gi|190623372|gb|EDV38896.1| GF25032 [Drosophila ananassae]
Length = 643
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 130 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 189
Query: 139 MHGKV 143
M+G +
Sbjct: 190 MNGAL 194
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SE+ +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 227 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 286
Query: 139 MH 140
M+
Sbjct: 287 MN 288
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 91 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 150
Query: 139 MHG 141
M+G
Sbjct: 151 MNG 153
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +E+ +++ F+ FG + L +R +G+ F+ Y T + + AI
Sbjct: 189 RIYIASIHQDLTEEDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 248
Query: 139 MH 140
M+
Sbjct: 249 MN 250
>gi|225441175|ref|XP_002265930.1| PREDICTED: uncharacterized protein LOC100257264 [Vitis vinifera]
Length = 332
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GL + TSE L +AF +G+++E ++M++ RPRGF F+ +A
Sbjct: 4 REENRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMED 63
Query: 135 AIEGMHGK 142
AI MHG+
Sbjct: 64 AIREMHGR 71
>gi|62733051|gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77549578|gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|222615796|gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japonica Group]
Length = 465
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
L LPP + +F+ GL T+E+ LR FG++ EV L+ DK +G
Sbjct: 96 LLALPPQ---------GSEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKG 146
Query: 121 FAFLRYATEEESRRAIEGMHGK 142
FAF+ + +E ++RAIE +H K
Sbjct: 147 FAFVNFTAKEAAQRAIEELHDK 168
>gi|78706524|ref|NP_001027063.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|78707532|ref|NP_524791.3| Sex lethal, isoform C [Drosophila melanogaster]
gi|22831873|gb|AAN09197.1| Sex lethal, isoform C [Drosophila melanogaster]
gi|71854532|gb|AAZ52510.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|317453674|gb|ADV19045.1| RE22452p [Drosophila melanogaster]
Length = 344
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 201 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 260
Query: 138 GMHGKV 143
++ +
Sbjct: 261 ALNNVI 266
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 69 HSLSTCQPK-----TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
+S+ PK RL+V L F +ED LR F+ FG++ + L+MD R +G+ F
Sbjct: 245 NSMPNLMPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGF 304
Query: 124 LRYATEEESRRAIEGMHG 141
L + +++++A+E ++G
Sbjct: 305 LTFRNADDAKKALEQLNG 322
>gi|227206222|dbj|BAH57166.1| AT2G21660 [Arabidopsis thaliana]
Length = 99
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGK 142
+ AIEGM+G+
Sbjct: 61 AMKDAIEGMNGQ 72
>gi|78706522|ref|NP_001027062.1| Sex lethal, isoform O [Drosophila melanogaster]
gi|71854531|gb|AAZ52509.1| Sex lethal, isoform O [Drosophila melanogaster]
Length = 364
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 200 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 259
Query: 137 EGMHGKV 143
++ +
Sbjct: 260 SALNNVI 266
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 74 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 133
Query: 139 MHG 141
M+G
Sbjct: 134 MNG 136
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +ED +++ F+ FG + L +R +G+ F+ Y T + + AI
Sbjct: 172 RIYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 231
Query: 139 MH 140
M+
Sbjct: 232 MN 233
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V L +D L F FGQ+V+ N++ DK+ RPRG AF+R++ EE++ A+
Sbjct: 206 TNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDALN 265
Query: 138 GMHGKV 143
++ V
Sbjct: 266 TLNNTV 271
>gi|195162221|ref|XP_002021954.1| GL14245 [Drosophila persimilis]
gi|194103852|gb|EDW25895.1| GL14245 [Drosophila persimilis]
Length = 618
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V L +D L F FGQ+V+ N++ DK+ RPRG AF+R++ EE++ A+
Sbjct: 206 TNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFSKREEAQDALN 265
Query: 138 GMHGKV 143
++ V
Sbjct: 266 TLNNTV 271
>gi|388492860|gb|AFK34496.1| unknown [Medicago truncatula]
Length = 256
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 40/60 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T +D+LR F+ +G ++E ++ DK+ R +G+ F+ + + +++A E
Sbjct: 18 TKVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTFKDADSAKKACE 77
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 39 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 98
Query: 139 MHG 141
M+G
Sbjct: 99 MNG 101
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +ED +++ F+ FG + L +R +G+ F+ Y T + + AI
Sbjct: 137 RIYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 196
Query: 139 MH 140
M+
Sbjct: 197 MN 198
>gi|347756146|ref|YP_004863709.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
gi|347588663|gb|AEP13192.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
Length = 112
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF+T+ + LR+ F G + +V D+ NR RGF F+ + + E+ RAIE
Sbjct: 2 KLYVGNLSFQTTSEDLRDHFSKAGTVESAQVVEDRDTNRSRGFGFVEFTSTEDGNRAIEM 61
Query: 139 MHG 141
HG
Sbjct: 62 FHG 64
>gi|195469719|ref|XP_002099784.1| GE16683 [Drosophila yakuba]
gi|194187308|gb|EDX00892.1| GE16683 [Drosophila yakuba]
Length = 563
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V LS ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI+
Sbjct: 199 TNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIK 258
Query: 138 GMHGKV 143
++ V
Sbjct: 259 ALNNTV 264
>gi|3510252|gb|AAC33496.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 304
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T D++R F+ FG++VE ++ DK R +G+ F+ + E + RA +
Sbjct: 22 TKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQ 81
Query: 138 GM 139
M
Sbjct: 82 NM 83
>gi|444723245|gb|ELW63904.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 326
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 44 DSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQ 103
D + L++ + G P +L +P ++FV GLS TSE+ ++ F FG+
Sbjct: 84 DKVLELKEHKLDGKLID----PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGE 139
Query: 104 LVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKV 143
+ + L MD N RGF F+ Y EE ++ +E + ++
Sbjct: 140 IENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQI 179
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 26 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 85
Query: 135 AIE 137
+E
Sbjct: 86 VLE 88
>gi|194763735|ref|XP_001963988.1| GF20968 [Drosophila ananassae]
gi|190618913|gb|EDV34437.1| GF20968 [Drosophila ananassae]
Length = 379
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 213 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 272
Query: 137 EGMHGKV 143
++ +
Sbjct: 273 SALNNVI 279
>gi|194332974|ref|YP_002014834.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194310792|gb|ACF45187.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L + +ED LR AF FGQ+ N+++DK + R +GF F+ +E++ +AI+ +
Sbjct: 3 IYIGNLPYNITEDDLREAFNEFGQVDSANIIIDKFSGRSKGFGFVEMPNDEDAEKAIDSL 62
Query: 140 H 140
+
Sbjct: 63 N 63
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum CS3096]
Length = 112
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L++ LS+ T++D+LRNA Q FG +++ ++ D+ R RGF F+ + + EE+ A+ G
Sbjct: 4 KLYIGNLSWNTTDDTLRNACQEFGMIIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAVNG 63
Query: 139 MH 140
++
Sbjct: 64 LN 65
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 110 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 169
Query: 139 MHG 141
++G
Sbjct: 170 LNG 172
>gi|12643503|sp|Q24668.2|SXL_DROSU RecName: Full=Protein sex-lethal
Length = 354
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 213 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 272
Query: 138 GMHGKV 143
++ +
Sbjct: 273 ALNNVI 278
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 246 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 305
Query: 139 MHG 141
++G
Sbjct: 306 LNG 308
>gi|78706528|ref|NP_001027065.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|78710139|ref|NP_727162.2| Sex lethal, isoform D [Drosophila melanogaster]
gi|281359987|ref|NP_001162690.1| Sex lethal, isoform T [Drosophila melanogaster]
gi|135080|sp|P19339.1|SXL_DROME RecName: Full=Protein sex-lethal
gi|158426|gb|AAA28884.1| sex-linked protein [Drosophila melanogaster]
gi|158525|gb|AAA28922.1| Sx1 [Drosophila melanogaster]
gi|10728509|gb|AAG22410.1| Sex lethal, isoform D [Drosophila melanogaster]
gi|71854534|gb|AAZ52511.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|272506013|gb|ACZ95226.1| Sex lethal, isoform T [Drosophila melanogaster]
Length = 354
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 211 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 270
Query: 138 GMHGKV 143
++ +
Sbjct: 271 ALNNVI 276
>gi|281359979|ref|NP_001162686.1| Sex lethal, isoform P [Drosophila melanogaster]
gi|28317144|gb|AAO39587.1| LD15933p [Drosophila melanogaster]
gi|272506009|gb|ACZ95222.1| Sex lethal, isoform P [Drosophila melanogaster]
Length = 352
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 211 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 270
Query: 138 GMHGKV 143
++ +
Sbjct: 271 ALNNVI 276
>gi|1403308|emb|CAA67016.1| sex-lethal [Drosophila subobscura]
Length = 346
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 205 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 264
Query: 138 GMHGKV 143
++ +
Sbjct: 265 ALNNVI 270
>gi|442615379|ref|NP_727161.3| Sex lethal, isoform W [Drosophila melanogaster]
gi|324096522|gb|ADY17790.1| RE26226p [Drosophila melanogaster]
gi|440216502|gb|AAF46241.4| Sex lethal, isoform W [Drosophila melanogaster]
Length = 344
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 203 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 262
Query: 138 GMHGKV 143
++ +
Sbjct: 263 ALNNVI 268
>gi|242021379|ref|XP_002431122.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
gi|212516371|gb|EEB18384.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
Length = 571
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 103 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYDIPEAAQLALEQ 162
Query: 139 MHG 141
M+G
Sbjct: 163 MNG 165
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + +E +++ F+ FG + L N+ +G+ F+ Y T + + AI
Sbjct: 200 RIYVASIHSDLTEQDIQSVFEAFGSIKYCKLAQGHAPNKHKGYGFIEYETLQSALEAIGS 259
Query: 139 MH 140
M+
Sbjct: 260 MN 261
>gi|449677067|ref|XP_002163749.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like,
partial [Hydra magnipapillata]
Length = 165
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA-NRPRGFAFLRYATEE 130
S+ + +LFV GL++ T+E+SLRN F+ FG++ VNL +K N+ RGFAF+++ T+E
Sbjct: 28 SSDNNEGKLFVGGLAWDTTEESLRNYFEKFGEVESVNLKRNKEDLNKHRGFAFVKFVTQE 87
Query: 131 ESRRAI 136
+ +
Sbjct: 88 SADEVL 93
>gi|78710143|ref|NP_727164.2| Sex lethal, isoform H [Drosophila melanogaster]
gi|22831872|gb|AAF46240.2| Sex lethal, isoform H [Drosophila melanogaster]
Length = 366
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 202 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 261
Query: 137 EGMHGKV 143
++ +
Sbjct: 262 SALNNVI 268
>gi|260166763|gb|ACX32993.1| RE12578p [Drosophila melanogaster]
Length = 360
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 217 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 276
Query: 138 GMHGKV 143
++ +
Sbjct: 277 ALNNVI 282
>gi|78710119|ref|NP_727160.2| Sex lethal, isoform J [Drosophila melanogaster]
gi|78710165|ref|NP_727166.2| Sex lethal, isoform G [Drosophila melanogaster]
gi|22831874|gb|AAN09198.1| Sex lethal, isoform J [Drosophila melanogaster]
gi|71854533|gb|AAN09200.2| Sex lethal, isoform G [Drosophila melanogaster]
Length = 346
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 203 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 262
Query: 138 GMHGKV 143
++ +
Sbjct: 263 ALNNVI 268
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 44/62 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++D+LR+AF FGQ+++ ++ D+ R RGF F+ ++T EE+ +I+
Sbjct: 5 KVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQ 64
Query: 139 MH 140
M+
Sbjct: 65 MN 66
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 272 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 331
Query: 139 MHG 141
++G
Sbjct: 332 LNG 334
>gi|240254664|ref|NP_182201.4| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|63003880|gb|AAY25469.1| At2g46780 [Arabidopsis thaliana]
gi|330255657|gb|AEC10751.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 336
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T D++R F+ FG++VE ++ DK R +G+ F+ + E + RA +
Sbjct: 22 TKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQ 81
Query: 138 GMH 140
M+
Sbjct: 82 NMN 84
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RG F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMA 66
Query: 139 MHGK 142
M+GK
Sbjct: 67 MNGK 70
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 268 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 327
Query: 139 MHG 141
++G
Sbjct: 328 LNG 330
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V L F +ED LR F+ FG++ + L+MD R +G+ FL + +++++A+E
Sbjct: 269 RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQ 328
Query: 139 MHG 141
++G
Sbjct: 329 LNG 331
>gi|116624848|ref|YP_827004.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228010|gb|ABJ86719.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 97
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV LSF +ED++R F+ G++ VN+ D+ + +PRGF F+ A + E+ +AI +
Sbjct: 4 IFVGNLSFGATEDTVRALFETHGKVDRVNICTDRDSGQPRGFGFVEMANDSEAEKAISAV 63
Query: 140 HGK 142
+GK
Sbjct: 64 NGK 66
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 121 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 180
Query: 139 MHG 141
M+G
Sbjct: 181 MNG 183
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +ED +++ F+ FG + L +R +G+ F+ Y T + + AI
Sbjct: 219 RIYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 278
Query: 139 MH 140
M+
Sbjct: 279 MN 280
>gi|344284839|ref|XP_003414172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Loxodonta africana]
Length = 363
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|297806589|ref|XP_002871178.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
gi|297317015|gb|EFH47437.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV L + +E+ L F FG++ EV+LV+DK RG AF+ Y E ++RA+E
Sbjct: 213 RLFVRNLPYTATEEELTEHFSKFGEISEVHLVLDKETKNSRGMAFVLYQIPEYAKRAMEE 272
Query: 139 MHGK 142
+ K
Sbjct: 273 LDNK 276
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ED LRN F G++ +V L K R R FA++ + TE+E++ AI
Sbjct: 2 TEDRLRNVFSKKGEITDVKL-RRKSDGRSRQFAYIGFRTEQEAQDAI 47
>gi|15010818|dbj|BAB62188.1| JKTBP1delta6 [Homo sapiens]
Length = 244
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 44 DSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQ 103
D + L++ + G P +L +P ++FV GLS TSE+ ++ F FG+
Sbjct: 84 DKVLELKEHKLDGKLID----PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGE 139
Query: 104 LVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKV 143
+ + L MD N RGF F+ Y EE ++ +E + ++
Sbjct: 140 IENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQI 179
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 26 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 75
>gi|164449257|gb|ABY56086.1| putative heterogeneous nuclear ribonucleoprotein [Cucumis melo]
Length = 74
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ G+S+ TSED L++ F +G+++ ++ DKI +RPRGF F+ ++ R ++
Sbjct: 7 KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
Query: 139 MH 140
H
Sbjct: 67 KH 68
>gi|125572147|gb|EAZ13662.1| hypothetical protein OsJ_03579 [Oryza sativa Japonica Group]
Length = 312
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 53 RGRGACFPLACLPPSPHS--LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLV 110
RG LA L PS LS K ++FV GL +E L+ F FG++ +V
Sbjct: 97 RGTTMDIKLAQLKPSAGGPQLSPGDQKRKIFVGGLPVSATEKKLKEYFNKFGEVNRAIVV 156
Query: 111 MDKIANRPRGFAFLRYATEEESRRAIEGMHGKVCCCFWM 149
+D PRGF F+++A+EE + RA++ C W+
Sbjct: 157 IDLNTKMPRGFGFIQFASEESTARALK-KDKHFLCGQWV 194
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
++FV G+ TSE LR F FG + V +K RGFAF+++ ++
Sbjct: 30 KVFVGGVPLGTSESELRAQFSRFGTVAFVGAPKNKQTGAARGFAFVQFVNPDD 82
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ K +LFV G+S+ TSE+ N F +G++ + ++MD+ RPRGF F+ +A + +
Sbjct: 196 EDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADK 255
Query: 135 AIEGMH 140
+E H
Sbjct: 256 VLEEDH 261
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 77 KTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
KTR +FV G+ +ED L++ F +G +VE +++D + R RGF F+ + +E+ R
Sbjct: 286 KTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVER 344
>gi|332801090|ref|NP_001193929.1| heterogeneous nuclear ribonucleoprotein D-like isoform b [Homo
sapiens]
gi|114593993|ref|XP_001142118.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan troglodytes]
gi|397524665|ref|XP_003832309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pan paniscus]
gi|119626295|gb|EAX05890.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Homo
sapiens]
gi|410248288|gb|JAA12111.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296198|gb|JAA26699.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 363
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 121 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 180
Query: 139 MHG 141
M+G
Sbjct: 181 MNG 183
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +ED +++ F+ FG + L +R +G+ F+ Y T + + AI
Sbjct: 219 RIYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 278
Query: 139 MH 140
M+
Sbjct: 279 MN 280
>gi|195427509|ref|XP_002061819.1| GK17204 [Drosophila willistoni]
gi|194157904|gb|EDW72805.1| GK17204 [Drosophila willistoni]
Length = 631
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 111 RVYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 170
Query: 139 MHGKV 143
M+G +
Sbjct: 171 MNGAL 175
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SE+ +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 208 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 267
Query: 139 MH 140
M+
Sbjct: 268 MN 269
>gi|156086826|ref|XP_001610820.1| ribonucleoprotein [Babesia bovis T2Bo]
gi|154798073|gb|EDO07252.1| ribonucleoprotein, putative [Babesia bovis]
Length = 306
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
L T + R+FV G++ SED ++ F +G ++ N ++DK N+PRGF F+ Y
Sbjct: 116 LPTREEVNRIFVGGIADNISEDEFKDYFGKYGSVLNYNFIVDKSTNKPRGFGFVVYEDPA 175
Query: 131 ESRRAIEGMHGKV 143
+ +AI G H K+
Sbjct: 176 DVDKAI-GHHTKL 187
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
++F GL+ T+ ++LRN F +G +V +V DK R RGF F+ ++ +
Sbjct: 33 KIFAGGLNRSTTAETLRNYFSKYGTVVHSEIVADKTTGRSRGFGFVTFSND 83
>gi|344284837|ref|XP_003414171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Loxodonta africana]
Length = 420
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query: 135 AIE 137
+E
Sbjct: 205 VLE 207
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P T++FV LS+ T +SL +AF FG++V+ ++ D+ R RGF F+ +++ E +
Sbjct: 7 AAPGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESAS 66
Query: 134 RAIEGMHGK 142
A++ M+G+
Sbjct: 67 AAVDAMNGQ 75
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 75 QPK-----TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
QPK RL+V L F +ED LR F+ FG++ + L+MD R +G+ F+ Y
Sbjct: 361 QPKLHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNA 420
Query: 130 EESRRAIEGMHG 141
+++++A+E ++G
Sbjct: 421 DDAKKALEQLNG 432
>gi|296486392|tpg|DAA28505.1| TPA: heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
Length = 420
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query: 135 AIE 137
+E
Sbjct: 205 VLE 207
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
Length = 184
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 101 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 160
Query: 138 GMHGKV 143
++ +
Sbjct: 161 ALNNVI 166
>gi|410957345|ref|XP_003985289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Felis catus]
Length = 363
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R R F F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAK 61
Query: 134 RAIEGMHGK 142
A+ M+GK
Sbjct: 62 DAMMAMNGK 70
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 121 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 180
Query: 139 MHG 141
M+G
Sbjct: 181 MNG 183
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +ED +++ F+ FG + L +R +G+ F+ Y T + + AI
Sbjct: 219 RIYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 278
Query: 139 MH 140
M+
Sbjct: 279 MN 280
>gi|144226849|ref|NP_001077194.1| heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
gi|134024605|gb|AAI34449.1| HNRPDL protein [Bos taurus]
Length = 420
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query: 135 AIE 137
+E
Sbjct: 205 VLE 207
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R L V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 9 SGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 129 EEESRRAIEGMHG 141
E+E++ AI+G+ G
Sbjct: 69 EDEAQDAIDGLDG 81
>gi|417409283|gb|JAA51156.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 279
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P ++ T +P ++FV GLS T E+ +R F GFG++ + L MDK N+ RGF F+
Sbjct: 94 PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDK-TNKRRGFCFI 152
Query: 125 RYATEEESRRAIEGMHGKV 143
+ EE ++ +E + V
Sbjct: 153 TFKEEEPVKKIMEKKYHNV 171
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + + + + ++F+ GLS+ T++ L++ F FG++V+ L +D I R RGF F+
Sbjct: 9 PRHSEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 68
Query: 125 RYATEEESRRAIE----GMHGKV 143
+ E + ++ ++GKV
Sbjct: 69 LFKESESVDKVMDQKEHKLNGKV 91
>gi|402869385|ref|XP_003898743.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Papio anubis]
gi|402869387|ref|XP_003898744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Papio anubis]
Length = 420
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query: 135 AIE 137
+E
Sbjct: 205 VLE 207
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D + + +GFAF+ Y E ++ A+E
Sbjct: 121 RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ 180
Query: 139 MHG 141
M+G
Sbjct: 181 MNG 183
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ + +ED +++ F+ FG + L +R +G+ F+ Y T + + AI
Sbjct: 219 RIYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 278
Query: 139 MH 140
M+
Sbjct: 279 MN 280
>gi|103381|pir||B39725 sex-lethal sex determination protein MS11 - fruit fly (Drosophila
melanogaster)
gi|158523|gb|AAA28921.1| putative [Drosophila melanogaster]
Length = 366
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 202 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 261
Query: 137 EGMHGKV 143
++ +
Sbjct: 262 SALNNVI 268
>gi|395735093|ref|XP_003776523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pongo abelii]
gi|441625206|ref|XP_004089054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Nomascus
leucogenys]
Length = 363
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|354497787|ref|XP_003511000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Cricetulus griseus]
gi|344249844|gb|EGW05948.1| Heterogeneous nuclear ribonucleoprotein D-like [Cricetulus griseus]
Length = 271
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 71 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 130
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 131 TYTDEEPVKKLLESRYHQI 149
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + + +E
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLE 58
>gi|24655233|ref|NP_728610.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|24655237|ref|NP_728611.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|24655242|ref|NP_728612.1| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|281365434|ref|NP_001163315.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|281365436|ref|NP_001163316.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|281365438|ref|NP_001163317.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|281365440|ref|NP_001163318.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|281365442|ref|NP_001163319.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|281365444|ref|NP_001163320.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
gi|7292089|gb|AAF47502.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|10727221|gb|AAG22221.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|16768670|gb|AAL28554.1| HL02140p [Drosophila melanogaster]
gi|23092776|gb|AAG22222.2| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|27820105|gb|AAO25077.1| GH01086p [Drosophila melanogaster]
gi|220953270|gb|ACL89178.1| pUf68-PB [synthetic construct]
gi|272454997|gb|ACZ94587.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|272454998|gb|ACZ94588.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|272454999|gb|ACZ94589.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|272455000|gb|ACZ94590.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|272455001|gb|ACZ94591.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|272455002|gb|ACZ94592.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
Length = 545
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 39 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 98
Query: 139 MHGKV 143
M+G +
Sbjct: 99 MNGAL 103
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SE+ +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 136 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 195
Query: 139 MH 140
M+
Sbjct: 196 MN 197
>gi|395834185|ref|XP_003790092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Otolemur garnettii]
gi|395834187|ref|XP_003790093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Otolemur garnettii]
Length = 418
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|302806250|ref|XP_002984875.1| hypothetical protein SELMODRAFT_446044 [Selaginella moellendorffii]
gi|300147461|gb|EFJ14125.1| hypothetical protein SELMODRAFT_446044 [Selaginella moellendorffii]
Length = 354
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL VS LS +E L+ F +G ++ V+L MDK N P+GFA++ Y ++ ++ +A +
Sbjct: 59 SRLHVSQLSRNVNESHLKEIFGNYGDIIAVDLAMDKTVNLPKGFAYVDYKSKSDAEKAQQ 118
Query: 138 GMHG 141
M G
Sbjct: 119 FMDG 122
>gi|74001731|ref|XP_858286.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 9
[Canis lupus familiaris]
Length = 363
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|297673870|ref|XP_002814970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pongo abelii]
gi|332233343|ref|XP_003265861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Nomascus leucogenys]
gi|395735091|ref|XP_003776522.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pongo abelii]
Length = 420
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 101 RVYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 160
Query: 139 MHGKV 143
M+G +
Sbjct: 161 MNGAL 165
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SE+ +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 198 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAPGTSLHTHKGYGFIEYANKQAMDEAIAS 257
Query: 139 MH 140
M+
Sbjct: 258 MN 259
>gi|242041311|ref|XP_002468050.1| hypothetical protein SORBIDRAFT_01g038700 [Sorghum bicolor]
gi|241921904|gb|EER95048.1| hypothetical protein SORBIDRAFT_01g038700 [Sorghum bicolor]
Length = 310
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 40/60 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T +D+LR F+ +G ++E ++ DK+ R +G+ F+ + + +++A E
Sbjct: 30 TKVFVGGLAWETHKDTLREHFERYGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 89
>gi|386781544|ref|NP_001247638.1| heterogeneous nuclear ribonucleoprotein D-like [Macaca mulatta]
gi|380787105|gb|AFE65428.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|380787107|gb|AFE65429.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|383410015|gb|AFH28221.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
Length = 420
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|14110407|ref|NP_112740.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Homo
sapiens]
gi|114593989|ref|XP_001142372.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4
[Pan troglodytes]
gi|332819433|ref|XP_003310370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Pan
troglodytes]
gi|397524661|ref|XP_003832307.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan paniscus]
gi|397524663|ref|XP_003832308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pan paniscus]
gi|74762096|sp|O14979.3|HNRDL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=AU-rich element RNA-binding factor; AltName:
Full=JKT41-binding protein; AltName: Full=Protein laAUF1
gi|4512254|dbj|BAA75239.1| JKTBP2 [Homo sapiens]
gi|4512257|dbj|BAA75241.1| JKTBP2 [Homo sapiens]
gi|15079822|gb|AAH11714.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|47115183|emb|CAG28551.1| HNRPDL [Homo sapiens]
gi|47938369|gb|AAH71944.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|63990763|gb|AAY40914.1| unknown [Homo sapiens]
gi|119626290|gb|EAX05885.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626291|gb|EAX05886.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626292|gb|EAX05887.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626293|gb|EAX05888.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626294|gb|EAX05889.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626296|gb|EAX05891.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|123987254|gb|ABM83797.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|123999068|gb|ABM87118.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|410248290|gb|JAA12112.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296200|gb|JAA26700.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339827|gb|JAA38860.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339829|gb|JAA38861.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339831|gb|JAA38862.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 420
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query: 135 AIE 137
+E
Sbjct: 205 VLE 207
>gi|195439114|ref|XP_002067476.1| GK16445 [Drosophila willistoni]
gi|194163561|gb|EDW78462.1| GK16445 [Drosophila willistoni]
Length = 373
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 206 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 265
Query: 137 EGMHGKV 143
++ +
Sbjct: 266 SALNNVI 272
>gi|126330931|ref|XP_001362287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Monodelphis
domestica]
Length = 417
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 217 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 276
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 277 TYTDEEPVKKLLENRYHQI 295
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 142 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 191
>gi|449276581|gb|EMC85043.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Columba livia]
Length = 271
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 72 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 131
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 132 TYTDEEPVKKLLESRYHQI 150
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + + +E
Sbjct: 1 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLE 59
>gi|195168643|ref|XP_002025140.1| GL26885 [Drosophila persimilis]
gi|198471287|ref|XP_002133706.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
gi|194108585|gb|EDW30628.1| GL26885 [Drosophila persimilis]
gi|198145851|gb|EDY72333.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
Length = 377
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 212 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 271
Query: 137 EGMHGKV 143
++ +
Sbjct: 272 SALNNVI 278
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T+++ L+ F FG +++ ++ D+ + R RGF F+ + E+ R
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 134 RAIEGMHGK 142
AIE M+GK
Sbjct: 62 DAIEEMNGK 70
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T+++ L+ F FG +++ ++ D+ + R RGF F+ + E+ R
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 134 RAIEGMHGK 142
AIE M+GK
Sbjct: 62 DAIEEMNGK 70
>gi|302795636|ref|XP_002979581.1| hypothetical protein SELMODRAFT_38604 [Selaginella moellendorffii]
gi|300152829|gb|EFJ19470.1| hypothetical protein SELMODRAFT_38604 [Selaginella moellendorffii]
Length = 91
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T++FV GL++ T D++R F+ FG+++E ++ DK R +G+ F+ + E +RRA E
Sbjct: 6 TKIFVGGLAWETQRDTMRQYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPESARRACE 65
>gi|194390304|dbj|BAG61914.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 71 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 130
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 131 TYTDEEPVKKLLESRYHQI 149
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + + +E
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLE 58
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P T ++R L +G + A L P + P LFV+ LS+ T
Sbjct: 94 PVPETETPAQKRARIHKLRLEKGAAKAA-EELEKYDPHNDPNVSGDPYKTLFVAKLSYET 152
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+E ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+
Sbjct: 153 TESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGR 205
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++DSLR AF +G +++ ++ D+ R RGF F+ Y+ EE+ AI
Sbjct: 4 KVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIAS 63
Query: 139 MHGK 142
+H +
Sbjct: 64 LHDQ 67
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS++ +E+ L+ AF +G++ V L D+ RPRGFAF+ TE + AIE +
Sbjct: 3 IYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEAL 62
Query: 140 HGKVCCCFWMA 150
G WM
Sbjct: 63 DG----AEWMG 69
>gi|74001737|ref|XP_858404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform
12 [Canis lupus familiaris]
Length = 420
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|149521754|ref|XP_001512512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Ornithorhynchus anatinus]
gi|338723434|ref|XP_003364726.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Equus
caballus]
gi|426231939|ref|XP_004009994.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Ovis
aries]
gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [Homo sapiens]
Length = 271
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 71 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 130
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 131 TYTDEEPVKKLLESRYHQI 149
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + + +E
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLE 58
>gi|355694953|gb|AER99843.1| heteroproteinous nuclear ribonucleoprotein D-like protein [Mustela
putorius furo]
Length = 294
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 44 DSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQ 103
D + L++ + G P +L +P ++FV GLS TSE+ ++ F FG+
Sbjct: 148 DKVLELKEHKLDGKLID----PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGE 203
Query: 104 LVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKV 143
+ + L MD N RGF F+ Y EE ++ +E + ++
Sbjct: 204 IENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQI 243
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 90 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 139
>gi|195336594|ref|XP_002034920.1| GM14211 [Drosophila sechellia]
gi|194128013|gb|EDW50056.1| GM14211 [Drosophila sechellia]
Length = 616
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 110 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 169
Query: 139 MHGKV 143
M+G +
Sbjct: 170 MNGAL 174
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SE+ +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 207 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 266
Query: 139 MH 140
M+
Sbjct: 267 MN 268
>gi|6118522|gb|AAF04132.1|AF190745_1 poly-U binding splicing factor [Drosophila melanogaster]
Length = 637
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190
Query: 139 MHGKV 143
M+G +
Sbjct: 191 MNGAL 195
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V+ + SE+ +++ F+ FG ++ L + +G+ F+ YA ++ AI
Sbjct: 228 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 287
Query: 139 MH 140
M+
Sbjct: 288 MN 289
>gi|544421|sp|Q99069.1|GRP1_SORBI RecName: Full=Glycine-rich RNA-binding protein 1
gi|21623|emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 142
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 92 DSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+SL +AF +G+++E +++D+ R RGF F+ ++TEE R AIEGM+GK
Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGK 51
>gi|395542045|ref|XP_003772945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Sarcophilus harrisii]
Length = 475
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 275 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 334
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 335 TYTDEEPVKKLLENRYHQI 353
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 200 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 259
Query: 135 AIE 137
+E
Sbjct: 260 VLE 262
>gi|296083995|emb|CBI24383.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV GL + + ++L +AF+ +GQ+ E N+V DKI R +G+ F+ + T +R+A++
Sbjct: 213 KIFVHGLGWDATNETLTSAFKQYGQIEECNVVTDKITGRSKGYGFVLFKTRSGARKALKQ 272
Query: 139 MHGKV 143
K+
Sbjct: 273 PQKKI 277
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
RL+V + + S + LR F FG++ + L DK + RGFA + + T E +RA+E
Sbjct: 306 RLYVGNVGPQISAEKLRTFFAKFGEIEDGPLGFDKATGKFRGFAIIVFKTAEGMKRALE 364
>gi|410957341|ref|XP_003985287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Felis catus]
gi|410957343|ref|XP_003985288.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Felis catus]
Length = 420
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|384245985|gb|EIE19477.1| hypothetical protein COCSUDRAFT_67908 [Coccomyxa subellipsoidea
C-169]
Length = 164
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
KT L+V GL +E L +AF FG + +VN+ +D + RGF F+ Y E+S AI
Sbjct: 16 KTTLYVGGLEENVNEAILHSAFIPFGDIKDVNIPLDNTTGKHRGFGFVEYENAEDSADAI 75
Query: 137 EGMH-----GKVCCC 146
+ MH G+V C
Sbjct: 76 DNMHNAELYGRVLRC 90
>gi|296196170|ref|XP_002745712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Callithrix jacchus]
gi|390460703|ref|XP_003732527.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Callithrix jacchus]
Length = 420
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 194
>gi|326918700|ref|XP_003205626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Meleagris gallopavo]
Length = 264
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 71 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 130
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 131 TYTDEEPVKKLLESRYHQI 149
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + + +E
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLE 58
>gi|148664250|ref|NP_057899.2| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
Length = 420
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 279
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 280 TYTDEEPVKKLLESRYHQI 298
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+ + +
Sbjct: 145 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Query: 135 AIE 137
+E
Sbjct: 205 VLE 207
>gi|39644771|gb|AAH07392.2| HNRPDL protein, partial [Homo sapiens]
Length = 415
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P +L +P ++FV GLS TSE+ ++ F FG++ + L MD N RGF F+
Sbjct: 215 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 274
Query: 125 RYATEEESRRAIEGMHGKV 143
Y EE ++ +E + ++
Sbjct: 275 TYTDEEPVKKLLESRYHQI 293
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
Q ++F+ GLS+ TS+ L FG++V+ + D + R RGF F+
Sbjct: 140 QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFV 189
>gi|410898649|ref|XP_003962810.1| PREDICTED: transformer-2 protein homolog beta-like [Takifugu
rubripes]
Length = 277
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P L V GLS T+E LR F +G L +VN+V D+ + R RGFAF+ + T E+S+
Sbjct: 111 DPNNCLGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFETSEDSKE 170
Query: 135 AIEGMHG 141
A E +G
Sbjct: 171 AKEHANG 177
>gi|196232841|ref|ZP_03131691.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196223040|gb|EDY17560.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 107
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF T+E L++ F G + E L+ DK + RGF F+ ++ EE+++AI+
Sbjct: 4 KLYVGNLSFDTTEMDLQDTFAEAGTVSEATLMQDKFTGKSRGFGFVTMSSSEEAQKAIDL 63
Query: 139 MHGKVC 144
HGK
Sbjct: 64 FHGKTV 69
>gi|164449270|gb|ABY56098.1| putative heterogeneous nuclear ribonucleoprotein [Cucumis sativus]
Length = 79
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ G+S+ TSED L++ F +G+++ ++ DKI +RPRGF F+ ++ R ++
Sbjct: 7 KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
Query: 139 MH 140
H
Sbjct: 67 KH 68
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P T ++R L +G + A L P + P LFV+ LS+ T
Sbjct: 94 PVPETETPAQKRARIHKLRLEKGAAKAA-EELEKYDPHNDPNVSGDPYKTLFVAKLSYET 152
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+E ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+
Sbjct: 153 TESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGR 205
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 CQPKT-RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
C+P + +LF+ GLS+ T+E+ LR+ F +G +VE ++ D+ RPRGF F+ + +
Sbjct: 4 CRPTSAKLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAA 63
Query: 133 RRAIEGMH 140
+E +H
Sbjct: 64 DAVVEDVH 71
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 75 QPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE--EE 131
+PK R +FV GLS T+ED R F FG++VE ++ D ++ R RGF F+ +A + E
Sbjct: 89 KPKARKVFVGGLSPDTTEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAE 148
Query: 132 SRRAIEGMH 140
S A MH
Sbjct: 149 SVFAAGTMH 157
>gi|195396313|ref|XP_002056776.1| Sex lethal [Drosophila virilis]
gi|194146543|gb|EDW62262.1| Sex lethal [Drosophila virilis]
Length = 368
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 203 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAI 262
Query: 137 EGMHGKV 143
++ +
Sbjct: 263 SALNNVI 269
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 166
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + +L AF +G++++ ++ D+ R RGF F+ + E+ + AIEG
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 139 MHGK 142
M+G+
Sbjct: 69 MNGQ 72
>gi|157833885|pdb|1SXL|A Chain A, Resonance Assignments And Solution Structure Of The Second
Rna-Binding Domain Of Sex-Lethal Determined By
Multidimensional Heteronuclear Magnetic Resonance
Spectroscopy
Length = 97
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L+V+ L ++D L F +G +V+ N++ DK+ RPRG AF+RY EE++ AI
Sbjct: 14 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 73
Query: 138 GMH 140
++
Sbjct: 74 ALN 76
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++V +SF ED++R AF FG + +N+ D I + +GFAF+ Y E ++ A+E
Sbjct: 161 RVYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 220
Query: 139 MHG 141
M+G
Sbjct: 221 MNG 223
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 67 SPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
S H + + L V L + TS D +R+ F +G++ +V L +D +PRGF F+ +
Sbjct: 2 SDHQRRGGKRRISLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEF 61
Query: 127 ATEEESRRAIEGMHGK 142
EE++ A+ GM G+
Sbjct: 62 YKEEDADEALRGMDGE 77
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.139 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,387,861,353
Number of Sequences: 23463169
Number of extensions: 92342386
Number of successful extensions: 285981
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14125
Number of HSP's successfully gapped in prelim test: 4755
Number of HSP's that attempted gapping in prelim test: 258776
Number of HSP's gapped (non-prelim): 29694
length of query: 151
length of database: 8,064,228,071
effective HSP length: 114
effective length of query: 37
effective length of database: 9,684,394,101
effective search space: 358322581737
effective search space used: 358322581737
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)