Query 031885
Match_columns 151
No_of_seqs 132 out of 1138
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 10:29:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1srv_A Protein (groel (HSP60 c 100.0 1.3E-68 4.5E-73 414.2 11.0 137 1-140 2-145 (145)
2 3osx_A 60 kDa chaperonin; alph 100.0 7.8E-66 2.7E-70 415.9 10.7 137 1-140 15-158 (201)
3 3m6c_A 60 kDa chaperonin 1; ch 100.0 1E-65 3.4E-70 413.7 9.9 137 1-140 8-151 (194)
4 3rtk_A 60 kDa chaperonin 2; he 100.0 2.9E-37 1E-41 278.1 10.4 137 1-140 191-334 (546)
5 1kp8_A Groel protein; chaperon 100.0 7.6E-37 2.6E-41 275.2 11.9 137 1-140 192-335 (547)
6 1we3_A CPN60(groel); chaperoni 100.0 3.8E-36 1.3E-40 270.2 9.6 137 1-140 191-334 (543)
7 1iok_A Chaperonin 60; chaperon 100.0 3.7E-36 1.3E-40 270.5 8.7 138 1-141 193-337 (545)
8 3iyg_E T-complex protein 1 sub 99.9 3.7E-22 1.3E-26 177.7 9.1 125 1-140 206-355 (515)
9 3p9d_E T-complex protein 1 sub 99.8 2.2E-21 7.5E-26 174.7 7.9 125 1-140 243-398 (562)
10 3p9d_A T-complex protein 1 sub 99.8 2.3E-21 8E-26 174.5 6.3 120 1-139 222-376 (559)
11 3aq1_B Thermosome subunit; gro 99.8 8.1E-21 2.8E-25 168.7 6.8 117 1-139 170-316 (500)
12 1a6d_A Thermosome (alpha subun 99.8 7.3E-21 2.5E-25 170.7 5.4 117 1-139 216-362 (545)
13 3iyg_H T-complex protein 1 sub 99.8 2E-20 6.9E-25 166.8 8.0 121 1-140 205-355 (515)
14 1q3q_A Thermosome alpha subuni 99.8 1.2E-20 4.1E-25 169.3 5.7 118 1-140 219-366 (548)
15 1a6d_B Thermosome (beta subuni 99.8 2.6E-20 8.9E-25 166.9 5.6 117 1-139 217-363 (543)
16 3ruv_A Chaperonin, CPN; double 99.8 7.6E-20 2.6E-24 164.0 6.7 119 1-140 212-359 (543)
17 3ko1_A Chaperonin; 9-fold symm 99.8 2.1E-19 7.3E-24 161.7 8.3 119 1-140 226-373 (553)
18 3iyg_B T-complex protein 1 sub 99.8 8.2E-19 2.8E-23 156.3 8.7 117 1-140 205-352 (513)
19 3p9d_D T-complex protein 1 sub 99.7 7.8E-19 2.7E-23 157.0 6.3 118 1-139 213-365 (528)
20 3iyg_Z T-complex protein 1 sub 99.7 1.9E-18 6.4E-23 154.2 8.2 118 1-140 202-358 (517)
21 3iyg_D T-complex protein 1 sub 99.7 1.6E-18 5.6E-23 154.5 7.1 123 1-140 206-358 (518)
22 3iyg_A T-complex protein 1 sub 99.7 1.1E-17 3.8E-22 149.5 7.6 119 1-140 208-361 (529)
23 3p9d_F T-complex protein 1 sub 99.7 4E-18 1.4E-22 152.8 4.2 119 1-140 213-370 (546)
24 3p9d_C T-complex protein 1 sub 99.7 7.6E-18 2.6E-22 153.0 5.8 118 1-140 223-371 (590)
25 3p9d_G T-complex protein 1 sub 99.7 1.5E-17 5.2E-22 149.4 6.8 121 1-140 218-368 (550)
26 3p9d_B T-complex protein 1 sub 99.7 2.2E-17 7.6E-22 147.3 4.6 116 1-139 212-358 (527)
27 3iyg_Q T-complex protein 1 sub 99.7 1.1E-16 3.8E-21 142.4 7.9 122 1-140 205-350 (512)
28 3iyg_G T-complex protein 1 sub 99.6 2.6E-16 8.8E-21 140.3 7.3 119 1-140 206-354 (515)
29 3p9d_H T-complex protein 1 sub 99.5 3E-15 1E-19 135.0 4.1 116 1-140 226-374 (568)
30 1ass_A Thermosome; chaperonin, 97.9 3.9E-05 1.3E-09 58.8 7.6 107 18-139 15-150 (159)
31 1gml_A T-complex protein 1 sub 97.4 0.00056 1.9E-08 53.0 8.1 108 17-139 20-157 (178)
32 2dun_A POL MU, DNA polymerase 38.9 8.5 0.00029 28.8 0.7 26 87-112 22-47 (133)
33 2coe_A Deoxynucleotidyltransfe 37.2 21 0.00072 25.9 2.6 26 87-112 32-57 (120)
34 2pt7_G HP1451, hypothetical pr 33.0 19 0.00066 27.1 1.8 32 66-101 63-94 (152)
35 3v7e_A Ribosome-associated pro 32.9 15 0.0005 24.4 1.0 42 37-79 16-57 (82)
36 3n2l_A OPRT, oprtase, orotate 24.8 38 0.0013 27.0 2.3 67 2-82 49-125 (238)
37 3v7q_A Probable ribosomal prot 23.4 52 0.0018 22.4 2.5 19 49-67 35-53 (101)
38 1jo0_A Hypothetical protein HI 22.3 86 0.0029 21.8 3.5 61 47-110 16-77 (98)
39 2ls2_A High affinity copper up 27.0 20 0.00068 19.6 0.0 10 142-151 6-15 (26)
40 2aee_A OPRT, oprtase, orotate 21.2 28 0.00096 26.4 0.8 24 50-73 68-91 (211)
41 1rq8_A Conserved hypothetical 20.1 80 0.0027 22.3 3.0 60 47-110 15-76 (104)
42 1lh0_A OMP synthase; loop clos 20.1 32 0.0011 26.4 0.9 67 2-81 24-99 (213)
No 1
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=1.3e-68 Score=414.15 Aligned_cols=137 Identities=27% Similarity=0.433 Sum_probs=135.0
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeeccccchHHHHHHH--HhhcCCCeEEEEcccccchhhhhhcccccccce
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (151)
|||||||+|||| ||+++|+++|||||||+||+|||+++|++|+| +++++||||||||||++|||+|||+||+||+++
T Consensus 2 mqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l~ 81 (145)
T 1srv_A 2 YQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLS 81 (145)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCC
T ss_pred ccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccce
Confidence 899999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCceEeec---eeccCCCCCCCceeeEEEEcCCCeeeecCC
Q 031885 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKEVRCSDLQFCFPHQS 140 (151)
Q Consensus 78 v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~~l~g~ 140 (151)
|| |||| |||||||++|+|||++|||+||++ ++|+++++++||+|+||+||||+|+|++|.
T Consensus 82 v~AVKAP---gfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G~ 145 (145)
T 1srv_A 82 VAAVKAP---GFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGK 145 (145)
T ss_dssp EEEEECC---SSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEEC
T ss_pred EEEEeCC---CcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCCC
Confidence 99 9999 999999999999999999999999 999999999999999999999999999884
No 2
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=7.8e-66 Score=415.92 Aligned_cols=137 Identities=26% Similarity=0.392 Sum_probs=134.8
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeeccccchHHHHHHH--HhhcCCCeEEEEcccccchhhhhhcccccccce
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (151)
|||||||+|||| ||+++|+++|+|||||+||+|||++++|+|+| +++++||||||||||++|||+|||+||+||+++
T Consensus 15 ~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~l~ 94 (201)
T 3osx_A 15 MQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGIVK 94 (201)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTSCC
T ss_pred cEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccceEE
Confidence 899999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCceEeec---eeccCCCCCCCceeeEEEEcCCCeeeecCC
Q 031885 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKEVRCSDLQFCFPHQS 140 (151)
Q Consensus 78 v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~~l~g~ 140 (151)
|| |||| ||||+||++|+||||+|||+||++ ++|+++++++||+|++|+||||+|+|++|.
T Consensus 95 v~AVKAP---gFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~ 158 (201)
T 3osx_A 95 VASVKAP---GFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGV 158 (201)
T ss_dssp EEEEECS---SCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEEC
T ss_pred EEEEeCC---CCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCC
Confidence 99 9999 999999999999999999999999 899999999999999999999999999874
No 3
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-65 Score=413.71 Aligned_cols=137 Identities=28% Similarity=0.402 Sum_probs=134.9
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeeccccchHHHHHHH--HhhcCCCeEEEEcccccchhhhhhcccccccce
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (151)
|||||||+|||| ||+++|+++|+|||||+||+|||++++++|+| +++++||||||||||++|||+|||+||+||+++
T Consensus 8 mqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNklrg~l~ 87 (194)
T 3m6c_A 8 IGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNAIRKTLK 87 (194)
T ss_dssp EEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHHHTSSC
T ss_pred eEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhhccceEE
Confidence 899999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCceEeec---eeccCCCCCCCceeeEEEEcCCCeeeecCC
Q 031885 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKEVRCSDLQFCFPHQS 140 (151)
Q Consensus 78 v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~~l~g~ 140 (151)
|| |||| ||||+||++|+|||++|||+||++ ++|+++++++||+|++|+||||+|+|++|.
T Consensus 88 v~AVKAP---gfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~ 151 (194)
T 3m6c_A 88 AVAVKGP---YFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGG 151 (194)
T ss_dssp EEEEECS---SCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEEC
T ss_pred EEEEECC---CCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCC
Confidence 99 9999 999999999999999999999999 899999999999999999999999999875
No 4
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=2.9e-37 Score=278.14 Aligned_cols=137 Identities=28% Similarity=0.467 Sum_probs=133.4
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeeccccchHHHHHHH--HhhcCCCeEEEEcccccchhhhhhcccccccce
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (151)
|+|||||+|||| ||+++|..+++|||||++|.||+++++++|+| +.+.++||||++++|+++||++|+.|++||+++
T Consensus 191 m~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~ 270 (546)
T 3rtk_A 191 MRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFK 270 (546)
T ss_dssp EEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCC
T ss_pred EEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceE
Confidence 689999999999 99999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCceEeec---eeccCCCCCCCceeeEEEEcCCCeeeecCC
Q 031885 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKEVRCSDLQFCFPHQS 140 (151)
Q Consensus 78 v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~~l~g~ 140 (151)
|+ ||+| +||++|++.|+|||++|||+++++ ++++++++++||+|++|++++|+|+|+.|.
T Consensus 271 v~aVk~~---~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~ 334 (546)
T 3rtk_A 271 SVAVKAP---GFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGA 334 (546)
T ss_dssp EEEEECS---SCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEEC
T ss_pred EEEeccc---cccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCC
Confidence 99 9999 999999999999999999999997 689999999999999999999999999874
No 5
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=7.6e-37 Score=275.24 Aligned_cols=137 Identities=26% Similarity=0.394 Sum_probs=133.7
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeeccccchHHHHHHH--HhhcCCCeEEEEcccccchhhhhhcccccccce
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (151)
|+|||||+|||| ||+++|.++++|||||++|+||+++++++|+| +.+.++||||++++|+++||++|+.|++||+++
T Consensus 192 ~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~ 271 (547)
T 1kp8_A 192 MQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVK 271 (547)
T ss_dssp EEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSC
T ss_pred EEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhccccccee
Confidence 689999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCceEeec---eeccCCCCCCCceeeEEEEcCCCeeeecCC
Q 031885 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKEVRCSDLQFCFPHQS 140 (151)
Q Consensus 78 v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~~l~g~ 140 (151)
|+ |||| +||++|++.|+|||++|||+++++ +++++++.++||+|++|++++|+|+|+.|.
T Consensus 272 v~aVk~~---~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~ 335 (547)
T 1kp8_A 272 VAAVKAP---GFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGV 335 (547)
T ss_dssp EEEEECS---SCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEEC
T ss_pred EEEEecc---ccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCC
Confidence 99 9999 999999999999999999999998 789999999999999999999999999874
No 6
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=3.8e-36 Score=270.16 Aligned_cols=137 Identities=27% Similarity=0.433 Sum_probs=133.4
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeeccccchHHHHHHH--HhhcCCCeEEEEcccccchhhhhhcccccccce
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (151)
|+|||||+|||| ||+++|.++++||+||++|+||+++++++|+| +.+.++||||++++|+++||++|+.|++||+++
T Consensus 191 ~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~ 270 (543)
T 1we3_A 191 YQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLS 270 (543)
T ss_dssp EEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCC
T ss_pred EEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhcccccee
Confidence 689999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCceEeec---eeccCCCCCCCceeeEEEEcCCCeeeecCC
Q 031885 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKEVRCSDLQFCFPHQS 140 (151)
Q Consensus 78 v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~~l~g~ 140 (151)
|+ |||| +||++|++.|+|||++|||+++++ +++++++.++||+|++|++++|+|+|+.|.
T Consensus 271 v~aVk~~---~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~ 334 (543)
T 1we3_A 271 VAAVKAP---GFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGK 334 (543)
T ss_dssp EEEEECS---SSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEEC
T ss_pred EEEEecc---chhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCC
Confidence 99 9999 999999999999999999999998 789999999999999999999999999764
No 7
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.7e-36 Score=270.54 Aligned_cols=138 Identities=30% Similarity=0.420 Sum_probs=97.5
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeeccccchHHHHHHH--HhhcCCCeEEEEcccccchhhhhhcccccccce
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI--AQADSRPLLIVAEDVEDKLIGSLILGKTCLQNK 77 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L--~~~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~ 77 (151)
|+|||||+|||| ||+++|.++++|||||++|+||+++++++|+| +.+.++||||++++|+++||++|+.|++||+++
T Consensus 193 ~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~ 272 (545)
T 1iok_A 193 MQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLK 272 (545)
T ss_dssp EECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------
T ss_pred EEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccce
Confidence 689999999999 99999999999999999999999999999999 889999999999999999999999999999999
Q ss_pred EE-eecCCCCCchhhHhhhhhhhhhhhCceEeec---eeccCCCCCCCceeeEEEEcCCCeeeecCCc
Q 031885 78 VS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATNVSFMPLMLGSCKEVRCSDLQFCFPHQSL 141 (151)
Q Consensus 78 v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~l~~~~~~~LG~a~~v~vtkd~T~~l~g~~ 141 (151)
|+ |||| +||++|++.|+|||++|||+++++ ++++++++++||+|++|++++|+|+|+.|.-
T Consensus 273 v~aVk~~---~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~ 337 (545)
T 1iok_A 273 IAAVKAP---GFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAG 337 (545)
T ss_dssp CEEEECS---CCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCC
T ss_pred eEEEecc---hhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCC
Confidence 99 9999 999999999999999999999997 7899999999999999999999999998753
No 8
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.86 E-value=3.7e-22 Score=177.71 Aligned_cols=125 Identities=15% Similarity=0.097 Sum_probs=112.4
Q ss_pred CccCCcccCccc-cCCCC-ceEEeeCceEEE-----eeccccchHHH-----------HHHH--HhhcCCCeEEEEcccc
Q 031885 1 MKLKWRPVSSYF-TNQKA-KDCVLENPFLLI-----LENMIVSKNIV-----------EQAI--AQADSRPLLIVAEDVE 60 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~-~~~ele~p~ILl-----td~kIs~~~~i-----------lp~L--~~~~~rPLlIIAedv~ 60 (151)
|+|||||+|||| ++.++ +.+.|+.||.+. ++.+|++++++ .|.+ +.+.++||+|++++|+
T Consensus 206 ~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~ 285 (515)
T 3iyg_E 206 VIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFD 285 (515)
T ss_pred EEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 689999999999 98875 889999999998 78899999997 6777 8889999999999999
Q ss_pred cchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEE-----cCCCee
Q 031885 61 DKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRC-----SDLQFC 135 (151)
Q Consensus 61 ~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~v-----tkd~T~ 135 (151)
++||++|+.|++++ |+.+ + ++.|+|||.+|||+++++ ++++++++||+|+++.+ ++|+++
T Consensus 286 ~~al~~L~~~~I~~-----v~~v---~-----k~~le~ia~~tGa~ii~~--l~~l~~~~LG~a~~v~~~~ig~~k~~~~ 350 (515)
T 3iyg_E 286 DEANHLLLQNDLPA-----VRWV---G-----GPEIELIAIATGGRIVPR--FSELTAEKLGFAGLVKEISFGTTKDKML 350 (515)
T ss_pred HHHHHHHHHCCCEE-----Eecc---C-----HHHHHHHHHHhCCEEecc--cccCCHHHCCcceEEEEEEeccccceEE
Confidence 99999999999875 5666 3 668999999999999985 77889999999999999 889999
Q ss_pred eecCC
Q 031885 136 FPHQS 140 (151)
Q Consensus 136 ~l~g~ 140 (151)
++.|.
T Consensus 351 ~~~g~ 355 (515)
T 3iyg_E 351 VIEQC 355 (515)
T ss_pred EEEcC
Confidence 99873
No 9
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.84 E-value=2.2e-21 Score=174.74 Aligned_cols=125 Identities=16% Similarity=0.119 Sum_probs=111.3
Q ss_pred CccCCcccCccc-cCC-------CCceEEeeCceEEEee-----ccccchHH-----------HHHHH--HhhcCCCeEE
Q 031885 1 MKLKWRPVSSYF-TNQ-------KAKDCVLENPFLLILE-----NMIVSKNI-----------VEQAI--AQADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyF-td~-------~~~~~ele~p~ILltd-----~kIs~~~~-----------ilp~L--~~~~~rPLlI 54 (151)
|+|||||+|||| ++. +.+.+.|+.||.+..+ .+|+++++ +.|.+ +.+.++||+|
T Consensus 243 mv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI 322 (562)
T 3p9d_E 243 VILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVI 322 (562)
T ss_dssp EEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCE
T ss_pred EEEecCCCCCCcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 689999999999 886 8889999999999866 68999998 67888 8899999999
Q ss_pred EEcccccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEE-----
Q 031885 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRC----- 129 (151)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~v----- 129 (151)
++++|+++||.+|+.|++++ |+.+ + ++.|+|||.+|||+++++ +++++.++||+|++|.+
T Consensus 323 ~~~~I~~~Al~~L~~~~I~~-----v~~v---~-----k~~le~ia~~TGa~iis~--l~~l~~~~LG~a~~v~~~~ig~ 387 (562)
T 3p9d_E 323 CQWGFDDEANHLLLQNDLPA-----VRWV---G-----GQELEHIAISTNGRIVPR--FQDLSKDKLGTCSRIYEQEFGT 387 (562)
T ss_dssp ECSSCCSHHHHHHHTTTCCC-----EECC---C-----TTTHHHHHHHHCCCEEES--SSCCCTTSCEECSCEEEECCSS
T ss_pred EeCCCCHHHHHHHHHCCCEE-----Eecc---C-----HHHHHHHHHHhCCEEEec--cccCCHHHCCcceEEEEEEecc
Confidence 99999999999999999986 6777 2 667999999999999986 78889999999999999
Q ss_pred cCCCeeeecCC
Q 031885 130 SDLQFCFPHQS 140 (151)
Q Consensus 130 tkd~T~~l~g~ 140 (151)
++|+++|+.|.
T Consensus 388 ~~~~~~~i~g~ 398 (562)
T 3p9d_E 388 TKDRMLIIEQS 398 (562)
T ss_dssp SSCCEEEECCC
T ss_pred CCceEEEEecC
Confidence 78999999873
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.83 E-value=2.3e-21 Score=174.46 Aligned_cols=120 Identities=16% Similarity=0.189 Sum_probs=103.9
Q ss_pred CccCCcccCccccCCCCceEEee--CceEEEeeccc-------------cchHH-----------HHHHH--HhhcCCCe
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLE--NPFLLILENMI-------------VSKNI-----------VEQAI--AQADSRPL 52 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele--~p~ILltd~kI-------------s~~~~-----------ilp~L--~~~~~rPL 52 (151)
|+|||||.|||| ..+++ ||+||++|.++ ++.++ +.|.+ +.+.++||
T Consensus 222 ~v~dk~~~~~~m------~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~l 295 (559)
T 3p9d_A 222 YALNCTVASQAM------PKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQV 295 (559)
T ss_dssp ECCCCCCSSTTS------CSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEeecccCCCc------ceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCE
Confidence 689999999998 12566 99999999997 56666 78888 88999999
Q ss_pred EEEEcccccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeec---eec-cCCCCCCCceeeEEE
Q 031885 53 LIVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNG---ATN-VSFMPLMLGSCKEVR 128 (151)
Q Consensus 53 lIIAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~l-~~~~~~~LG~a~~v~ 128 (151)
+|++++|+++||++|+.|++ + .+++.|++.|+|||.+|||+++++ +++ ++++.++||+|++|.
T Consensus 296 vI~~~~I~~~al~~L~~~~I------~-------av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~ 362 (559)
T 3p9d_A 296 VLTTKGIDDLCLKEFVEAKI------M-------GVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVV 362 (559)
T ss_dssp EEESSCCCGGGTHHHHHTTC------E-------EESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEE
T ss_pred EEEcCCCCHHHHHHHHHcCC------c-------eEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEE
Confidence 99999999999999999975 2 334567888999999999999999 333 789999999999999
Q ss_pred ---EcCCCeeeecC
Q 031885 129 ---CSDLQFCFPHQ 139 (151)
Q Consensus 129 ---vtkd~T~~l~g 139 (151)
+++++++++.|
T Consensus 363 ~~~ig~~~~~~~~g 376 (559)
T 3p9d_A 363 QAKFSDDECILIKG 376 (559)
T ss_dssp EEECSSCEEECEEE
T ss_pred EEEEcCceEEEEEc
Confidence 79999999976
No 11
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.82 E-value=8.1e-21 Score=168.70 Aligned_cols=117 Identities=12% Similarity=0.132 Sum_probs=99.0
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeecc-------------ccchHHH-----------HHHH--HhhcCCCeEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIV-----------EQAI--AQADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~k-------------Is~~~~i-----------lp~L--~~~~~rPLlI 54 (151)
|.|||||.|||| ..+++||+||++|.+ |++++++ .|.+ +.+.++||+|
T Consensus 170 ~v~dk~~~~~~m------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 243 (500)
T 3aq1_B 170 LVIDKERSHPNM------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVF 243 (500)
T ss_dssp EEESCCCSSTTS------CSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEE
T ss_pred eEEeecCCCCCC------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEE
Confidence 679999999998 226899999999999 9999997 8999 8899999999
Q ss_pred EEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc---
Q 031885 55 VAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS--- 130 (151)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt--- 130 (151)
++++|+++||.+|+.|+ ++ |+ +.|++.|+|||.+|||+++++ +++++.++||+|++|++.
T Consensus 244 ~~~~I~~~al~~L~~~~------I~av~--------~~~k~~le~ia~~tGa~iis~--l~~~~~~~LG~a~~v~~~~ig 307 (500)
T 3aq1_B 244 CQKGIDDMAQYYIEKAG------IYAVR--------RVKKSDLKRLSKVTGATIIQD--LDQITTEDVGTAGLVEEKEVR 307 (500)
T ss_dssp ESSCBCHHHHHHHHHTT------CEEEC--------SCCHHHHHHHHHHHCCCCBSC--TTCCCSTTCEEEEEEEEEECS
T ss_pred ECCCcCHHHHHHHHHCC------EEEEE--------eCCHHHHHHHHHHhCCeEecc--cccCCHhHCCCceEEEEEEec
Confidence 99999999999999986 34 53 567899999999999999985 788999999999999997
Q ss_pred CCCeeeecC
Q 031885 131 DLQFCFPHQ 139 (151)
Q Consensus 131 kd~T~~l~g 139 (151)
+++++++.|
T Consensus 308 ~~~~~~~~g 316 (500)
T 3aq1_B 308 GGKMTYVTG 316 (500)
T ss_dssp SSEEEEEEE
T ss_pred CeEEEEEEC
Confidence 899999987
No 12
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.81 E-value=7.3e-21 Score=170.68 Aligned_cols=117 Identities=17% Similarity=0.269 Sum_probs=104.3
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeecc-------------ccchHHH-----------HHHH--HhhcCCCeEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIV-----------EQAI--AQADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~k-------------Is~~~~i-----------lp~L--~~~~~rPLlI 54 (151)
|+|||||.|||| + ..++||+||++|.+ |++++++ .|.+ +.+.++||+|
T Consensus 216 ~v~dk~~~~~~m--~----~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 289 (545)
T 1a6d_A 216 IVIDKEKVHSKM--P----DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVL 289 (545)
T ss_dssp EEESCCCSCTTS--C----SEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEeccCCCCCC--c----ceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 689999999999 1 24899999999999 9999997 8888 8899999999
Q ss_pred EEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc---
Q 031885 55 VAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS--- 130 (151)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt--- 130 (151)
++++|+++||.+|+.|+ ++ |+ +.|++.|+|||.+|||+++++ +++++.++||+|++|++.
T Consensus 290 ~~~~I~~~al~~L~~~~------I~av~--------~~~k~~le~ia~~tGa~iis~--l~~~~~~~LG~a~~v~~~~ig 353 (545)
T 1a6d_A 290 CQKGIDDVAQHYLAKEG------IYAVR--------RVKKSDMEKLAKATGAKIVTD--LDDLTPSVLGEAETVEERKIG 353 (545)
T ss_dssp ESSCBCHHHHHHHHHHT------CEEEC--------SCCHHHHHHHHHHHCCCEESS--GGGCCGGGCEEEEEEEEEEET
T ss_pred ECCCccHHHHHHHHHCC------eeEec--------cCCHHHHHHHHHHhCCeeecc--cccCCHHHCCCceEEEEEEec
Confidence 99999999999999986 34 54 567889999999999999985 788899999999999987
Q ss_pred CCCeeeecC
Q 031885 131 DLQFCFPHQ 139 (151)
Q Consensus 131 kd~T~~l~g 139 (151)
+++++++.|
T Consensus 354 ~~~~~~~~g 362 (545)
T 1a6d_A 354 DDRMTFVMG 362 (545)
T ss_dssp TEEEEEEEE
T ss_pred CceEEEEec
Confidence 699999977
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.81 E-value=2e-20 Score=166.84 Aligned_cols=121 Identities=11% Similarity=0.140 Sum_probs=103.9
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeec-------------cccchHHH-----------HHHH--HhhcCCCeE
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILEN-------------MIVSKNIV-----------EQAI--AQADSRPLL 53 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~-------------kIs~~~~i-----------lp~L--~~~~~rPLl 53 (151)
|+|||||.|||| |+++ +++||+||++|. +|++++++ .|.+ +.+.++||+
T Consensus 205 ~~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vv 280 (515)
T 3iyg_H 205 VAFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVV 280 (515)
T ss_pred eEEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 689999999999 9887 799999999999 69999997 5556 788899999
Q ss_pred EEEcccccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc---
Q 031885 54 IVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS--- 130 (151)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt--- 130 (151)
|.+++|++ +++..+| .+|.+ .+++.|++.|+|||.+|||+++++ ++++++++||+|++++++
T Consensus 281 i~~~~I~d--la~~~l~-~~gI~----------~v~~~~k~~leria~~tGa~ii~~--l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 281 LSKLPIGD--VATQYFA-DRDMF----------CAGRVPEEDLKRTMMACGGSIQTS--VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred EECCcccH--HHHHHHH-HcCCc----------ccccccHHHHHHHHHHhCCEEeec--cccCCHHHCCcccEEEEEEEc
Confidence 99999985 7777777 57754 234567889999999999999986 678889999999999988
Q ss_pred CCCeeeecCC
Q 031885 131 DLQFCFPHQS 140 (151)
Q Consensus 131 kd~T~~l~g~ 140 (151)
+++++++.|.
T Consensus 346 ~~~~~~i~g~ 355 (515)
T 3iyg_H 346 GERYNFFTGC 355 (515)
T ss_pred CeEEEEEecC
Confidence 6899999874
No 14
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.81 E-value=1.2e-20 Score=169.34 Aligned_cols=118 Identities=16% Similarity=0.209 Sum_probs=105.2
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeecc-------------ccchHHH-----------HHHH--HhhcCCCeEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIV-----------EQAI--AQADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~k-------------Is~~~~i-----------lp~L--~~~~~rPLlI 54 (151)
|.|||||.|||| + .+++||+||++|.+ |++++++ .|.+ +.+.++||+|
T Consensus 219 ~v~dk~~~~~~m--~----~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 292 (548)
T 1q3q_A 219 VVIDKEVVHPRM--P----KRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVF 292 (548)
T ss_dssp EEESCCCSSTTS--C----SEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEeccCCCCCC--c----ceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEE
Confidence 679999999999 1 25899999999999 9999997 8888 8899999999
Q ss_pred EEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc---
Q 031885 55 VAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS--- 130 (151)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt--- 130 (151)
++++|+++||.+|+.|+ ++ |+ +.|++.|+|||.+|||+++++ +++++.++||+|++|++.
T Consensus 293 ~~~~I~~~al~~L~~~~------I~av~--------~~~k~~le~ia~~tGa~ii~~--l~~~~~~~LG~a~~v~~~~ig 356 (548)
T 1q3q_A 293 VQKGIDDLAQHYLAKYG------IMAVR--------RVKKSDMEKLAKATGAKIVTN--VKDLTPEDLGYAEVVEERKLA 356 (548)
T ss_dssp ESSCBCHHHHHHHHHTT------CEEEC--------SCCHHHHHHHHHHHCCCCBSS--GGGCCGGGCEEESEEEEEEET
T ss_pred EcCCcCHHHHHHHHHCC------cEEEc--------cCCHHHHHHHHHHhCCeEecc--cccCCHHHCCCceEEEEEEec
Confidence 99999999999999986 34 53 567899999999999999985 788899999999999987
Q ss_pred CCCeeeecCC
Q 031885 131 DLQFCFPHQS 140 (151)
Q Consensus 131 kd~T~~l~g~ 140 (151)
+++++++.|.
T Consensus 357 ~~~~~~~~g~ 366 (548)
T 1q3q_A 357 GENMIFVEGC 366 (548)
T ss_dssp TEEEEEEECC
T ss_pred CceEEEEecC
Confidence 8999999874
No 15
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.80 E-value=2.6e-20 Score=166.90 Aligned_cols=117 Identities=15% Similarity=0.203 Sum_probs=104.1
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeecc-------------ccchHHH-----------HHHH--HhhcCCCeEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENM-------------IVSKNIV-----------EQAI--AQADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~k-------------Is~~~~i-----------lp~L--~~~~~rPLlI 54 (151)
|.|||||.|||| + ..++||+||++|.+ |++++++ .|.+ +.+.++||+|
T Consensus 217 ~v~dk~~~~~~m--~----~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi 290 (543)
T 1a6d_B 217 IIVDKEKVHPGM--P----DVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVI 290 (543)
T ss_dssp EEESCCCSSTTS--C----SEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEecCCCCCCC--c----ceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 689999999998 1 24899999999999 9999997 8888 8899999999
Q ss_pred EEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc---
Q 031885 55 VAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS--- 130 (151)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt--- 130 (151)
++++|+++||.+|+.|+ ++ |+ +.|++.|+|||.+|||+++++ +++++.++||+|+++++.
T Consensus 291 ~~~~I~~~al~~L~~~~------I~av~--------~v~k~~le~ia~~tGa~iis~--l~~l~~~~LG~a~~v~~~~ig 354 (543)
T 1a6d_B 291 TQKGIDDMAQHYLSRAG------IYAVR--------RVKKSDMDKLAKATGASIVST--IDEISSSDLGTAERVEQVKVG 354 (543)
T ss_dssp ESSCBCHHHHHHHHHTT------CEEEC--------SCCHHHHHHHHHHHTCCEESC--GGGCCGGGCEEEEEEEEEEET
T ss_pred ECCCcCHHHHHHHHHCC------eeEec--------cCCHHHHHHHHHHhCCceecc--cccCCHHHCCCceEEEEEEec
Confidence 99999999999999985 34 54 467889999999999999985 778899999999999986
Q ss_pred CCCeeeecC
Q 031885 131 DLQFCFPHQ 139 (151)
Q Consensus 131 kd~T~~l~g 139 (151)
+++++++.|
T Consensus 355 ~~~~~~~~g 363 (543)
T 1a6d_B 355 EDYMTFVTG 363 (543)
T ss_dssp TEEEEEEEE
T ss_pred CceEEEEec
Confidence 899999987
No 16
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.79 E-value=7.6e-20 Score=164.01 Aligned_cols=119 Identities=16% Similarity=0.148 Sum_probs=101.9
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeec-------------cccchHH-----------HHHHH--HhhcCCCeEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN-------------MIVSKNI-----------VEQAI--AQADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~-------------kIs~~~~-----------ilp~L--~~~~~rPLlI 54 (151)
|+|||||+|||| ..+++||+||++|. +|+++++ +.|.+ +.+.+.||+|
T Consensus 212 ~v~dk~~~~~~m------~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi 285 (543)
T 3ruv_A 212 VLVDKERVSAQM------PKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLF 285 (543)
T ss_dssp EEESCCCSCTTS------CSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred eEEeccccCccc------cccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 689999999997 34689999999999 7899988 55666 7788999999
Q ss_pred EEcccccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc---C
Q 031885 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS---D 131 (151)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt---k 131 (151)
++++|+++|+.+|. .+|.+. |+.. |++.|+|||.+|||+++++ +++++.++||+|++|++. +
T Consensus 286 ~~~~I~~~al~~L~---~~gI~~--v~~v--------~k~~le~ia~~tGa~iis~--l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 286 CQKGIDDLAQHYLA---KEGIVA--ARRV--------KKSDMEKLAKATGANVIAA--IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp ESSCBCHHHHHHHH---HTTCEE--ECSC--------CHHHHHHHHHHHCCCEESC--GGGCCGGGCEEEEEEEEEEETT
T ss_pred EeCCccHHHHHHHH---HcCcEE--EeeC--------CHHHHHHHHHHhCCceecc--cccCCHHHCCcccEEEEEEeCC
Confidence 99999999999997 356543 4443 4778999999999999985 788899999999999987 8
Q ss_pred CCeeeecCC
Q 031885 132 LQFCFPHQS 140 (151)
Q Consensus 132 d~T~~l~g~ 140 (151)
|+++|+.|.
T Consensus 351 ~~~~~i~g~ 359 (543)
T 3ruv_A 351 DSMIFVEEC 359 (543)
T ss_dssp EEEEEEECC
T ss_pred ceEEEEECC
Confidence 999999873
No 17
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.78 E-value=2.1e-19 Score=161.66 Aligned_cols=119 Identities=15% Similarity=0.179 Sum_probs=101.8
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeec-------------cccchHH-----------HHHHH--HhhcCCCeEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN-------------MIVSKNI-----------VEQAI--AQADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~-------------kIs~~~~-----------ilp~L--~~~~~rPLlI 54 (151)
|+|||||+|||| ..+++||+||++|. +|+++++ +.|.+ +.+.+.||+|
T Consensus 226 ~v~dk~~~~~~m------~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI 299 (553)
T 3ko1_A 226 IVVDKEVVHPGM------PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVII 299 (553)
T ss_dssp EEECSCBSCTTS------CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred EEecccccCCCC------ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEE
Confidence 689999999998 23589999999999 7899998 55666 7888999999
Q ss_pred EEcccccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc---C
Q 031885 55 VAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS---D 131 (151)
Q Consensus 55 IAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt---k 131 (151)
++++|+++|+..|. .+|.+. |+.. |++.|+|||.+|||+++++ +++++.++||+|++|.+. +
T Consensus 300 ~~~~I~~~al~~L~---~~gI~~--v~~v--------~k~~leria~~tGa~ivs~--l~~l~~~~LG~a~~v~~~~ig~ 364 (553)
T 3ko1_A 300 CQKGIDEVAQSYLA---KKGVLA--VRRA--------KKSDLEKLARATGGRVVSN--IDEISEQDLGYASLIEERKVGE 364 (553)
T ss_dssp CSSCBCSHHHHHHH---HHTCEE--ECCC--------CHHHHHHHHTTTTCCEESC--GGGCCSSSSEECSEEECCCCSS
T ss_pred eccChHHHHHHHHH---hcchhh--hhhh--------hhhhHHHHHHhhCCeeecc--cccCChhhcchHHHHHHhhcCc
Confidence 99999999999997 356543 4443 4678999999999999985 788899999999999988 8
Q ss_pred CCeeeecCC
Q 031885 132 LQFCFPHQS 140 (151)
Q Consensus 132 d~T~~l~g~ 140 (151)
|+++|+.|.
T Consensus 365 d~~~~i~g~ 373 (553)
T 3ko1_A 365 DKMVFVEGA 373 (553)
T ss_dssp SCCEEEESC
T ss_pred ceEEEeccC
Confidence 999999873
No 18
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.76 E-value=8.2e-19 Score=156.25 Aligned_cols=117 Identities=18% Similarity=0.150 Sum_probs=102.7
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeec--------------cccchHHHHH-----------HH--HhhcCCCeE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN--------------MIVSKNIVEQ-----------AI--AQADSRPLL 53 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~--------------kIs~~~~ilp-----------~L--~~~~~rPLl 53 (151)
|+|||||.+| |..+++||+||++|. +|++++++.| .+ +.+.++||+
T Consensus 205 ~v~dk~~~~~-------m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vv 277 (513)
T 3iyg_B 205 FLLDKKIGVN-------QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCF 277 (513)
T ss_pred EEEeccccCC-------CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 6899999888 567899999999998 7999999987 45 788899999
Q ss_pred EEEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEE---E
Q 031885 54 IVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVR---C 129 (151)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~---v 129 (151)
|++++|+++|+..|.- .+++ ||.| +|. .|+|||.+|||+++++ ++++++++||+|++|. +
T Consensus 278 i~~~~I~~~al~~L~~------~~I~av~~~---~~~-----~le~ia~~tGa~ii~~--l~~l~~~~LG~a~~v~~~~i 341 (513)
T 3iyg_B 278 INRQLIYNYPEQLFGA------AGVMAIEHA---DFV-----GVERLALVTGGEIAST--FDHPELVKLGSCKLIEEVMI 341 (513)
T ss_pred EEcCCccHHHHHHHHH------cCceEEecC---CHH-----HHHHHHHHhCCEEecc--cccCCHhHCCcccEEEEEEE
Confidence 9999999999998873 4567 9999 774 4899999999999985 6788899999999998 7
Q ss_pred cCCCeeeecCC
Q 031885 130 SDLQFCFPHQS 140 (151)
Q Consensus 130 tkd~T~~l~g~ 140 (151)
.+++++++.|-
T Consensus 342 g~~~~~~~~g~ 352 (513)
T 3iyg_B 342 GEDKLIHFSGV 352 (513)
T ss_pred CCeEEEEEecC
Confidence 89999999873
No 19
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.75 E-value=7.8e-19 Score=157.00 Aligned_cols=118 Identities=11% Similarity=0.010 Sum_probs=99.4
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeecccc-------------chHH-----------HHHHH--HhhcCCCeEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENMIV-------------SKNI-----------VEQAI--AQADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~kIs-------------~~~~-----------ilp~L--~~~~~rPLlI 54 (151)
|.|||||+|||| |..+++||+||++|.+++ +.++ +.|.+ +.+.++||+|
T Consensus 213 ~v~dk~~~~~~~-----m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 213 VVLTQTAIKSAG-----GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp CBCCCCCCCSSS-----CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEeecccCccc-----CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 789999999997 667899999999999987 5554 78888 8899999999
Q ss_pred EEccc-----ccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEE
Q 031885 55 VAEDV-----EDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVR 128 (151)
Q Consensus 55 IAedv-----~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~ 128 (151)
++++| +++|+..|..|+ ++ ||-+ |++.|+|||.+|||+++++ +++++.++||+|++|.
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~~------I~av~~~--------~k~~le~ia~~tGa~ii~~--~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKLN------IMVVKDI--------EREEIEFLSKGLGCKPIAD--IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTTS------CCEEECC--------CTHHHHHHHHHHTCCCCSC--STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHcC------cEEEEeC--------CHHHHHHHHHHHCCEEecc--cccCCHHHCCcccEEE
Confidence 99999 888888888765 44 7766 3667999999999999987 5788899999999998
Q ss_pred Ec---CCCeeeecC
Q 031885 129 CS---DLQFCFPHQ 139 (151)
Q Consensus 129 vt---kd~T~~l~g 139 (151)
+. .++.+++.|
T Consensus 352 ~~~ig~~~~~~i~g 365 (528)
T 3p9d_D 352 EIDSDGSKIVRVTG 365 (528)
T ss_dssp CCEETTEECCBCTT
T ss_pred EEEECCEEEEEEEc
Confidence 77 344555665
No 20
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.74 E-value=1.9e-18 Score=154.22 Aligned_cols=118 Identities=14% Similarity=0.201 Sum_probs=99.1
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeeccc-------------------------------cchHHHHHHH--H-h
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENMI-------------------------------VSKNIVEQAI--A-Q 46 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~kI-------------------------------s~~~~ilp~L--~-~ 46 (151)
|+||+||.||| |..+++||+||++|.++ +.+++|+|++ + .
T Consensus 202 ~v~dk~~~~p~------m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~ 275 (517)
T 3iyg_Z 202 LVLDHGARHPD------MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCG 275 (517)
T ss_pred EEEeccCCCCC------ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 68999999998 56689999999999987 3577888887 3 4
Q ss_pred hcCCCeEEEE-cccccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCC-Ccee
Q 031885 47 ADSRPLLIVA-EDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLM-LGSC 124 (151)
Q Consensus 47 ~~~rPLlIIA-edv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~-LG~a 124 (151)
+.+||||||+ ++|+++|+..|.-| |.+. |+.. ++..|+|||.+|||+++++ +++++.++ ||+|
T Consensus 276 ~~~~~lvIi~~~~I~d~al~~L~~~---gI~~--v~~v--------~~~~leria~~tGa~iv~~--l~~l~~~~~LG~a 340 (517)
T 3iyg_Z 276 DSDKGFVVINQKGIDPFSLDALAKE---GIIA--LRRA--------KRRNMERLTLACGGIALNS--LDDLNPDCLLGHA 340 (517)
T ss_pred ccCCceEEEecccCCHHHHHHHHHC---CCEE--EEec--------CHHHHHHHHHHhCCEEecc--hhhCcccccCCcc
Confidence 5689999998 89999999999764 4332 5655 1456999999999999985 77888999 9999
Q ss_pred eEE---EEcCCCeeeecCC
Q 031885 125 KEV---RCSDLQFCFPHQS 140 (151)
Q Consensus 125 ~~v---~vtkd~T~~l~g~ 140 (151)
+ | ++.+++++++.|.
T Consensus 341 ~-v~e~~ig~~~~~~~~g~ 358 (517)
T 3iyg_Z 341 G-VYEYTLGEEKFTFIEKC 358 (517)
T ss_pred e-EEEEEEcCceEEEEeCC
Confidence 9 9 8999999999874
No 21
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.74 E-value=1.6e-18 Score=154.49 Aligned_cols=123 Identities=14% Similarity=0.128 Sum_probs=106.4
Q ss_pred CccCCcccC--ccc-cCCCC--ceEEeeCceEEEeec--cccchH-----------HHHHHH--HhhcCCCeEEE-----
Q 031885 1 MKLKWRPVS--SYF-TNQKA--KDCVLENPFLLILEN--MIVSKN-----------IVEQAI--AQADSRPLLIV----- 55 (151)
Q Consensus 1 m~fdrGylS--pyF-td~~~--~~~ele~p~ILltd~--kIs~~~-----------~ilp~L--~~~~~rPLlII----- 55 (151)
|+|||||.| ||+ +|++- +.+.||+|++. ++. +|++++ ++.|.+ +.+.++||+|+
T Consensus 206 ~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~-~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~ 284 (518)
T 3iyg_D 206 LVLTQKVANSGITRVEKAKIGLIQFCLSAPKTD-MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSIL 284 (518)
T ss_pred EEEecccccCCCccccCceEEEEEeeccccccc-cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecccc
Confidence 689999999 999 99887 68999999998 788 688886 468888 88999999999
Q ss_pred EcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEcCCC-
Q 031885 56 AEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCSDLQ- 133 (151)
Q Consensus 56 Aedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vtkd~- 133 (151)
+++|+++||.+|+.| +++ ||+| ++++ |+|||.+|||+++++ ++++++++||+|+++++.+..
T Consensus 285 ~~~I~~~Al~~L~~~------~I~av~~~---~~~~-----le~ia~~tGa~ii~~--l~~l~~~~LG~a~~v~~~~~g~ 348 (518)
T 3iyg_D 285 RDALSDLALHFLNKM------KIMVVKDI---ERED-----IEFICKTIGTKPVAH--VDQFTADMLGSAELAEEVSLNG 348 (518)
T ss_pred ccCcCHHHHHHHHHc------CcEEEecC---CHHH-----HHHHHHHhCCEEecc--cccCCHHHCCcCcEEEEEEeCC
Confidence 999999999999987 356 9999 7754 899999999999988 678889999999999987654
Q ss_pred ---eeeecCC
Q 031885 134 ---FCFPHQS 140 (151)
Q Consensus 134 ---T~~l~g~ 140 (151)
.+++.|-
T Consensus 349 ~~~~~~~~g~ 358 (518)
T 3iyg_D 349 SGKLIKITGC 358 (518)
T ss_pred CceEEEEECC
Confidence 3577763
No 22
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.71 E-value=1.1e-17 Score=149.47 Aligned_cols=119 Identities=16% Similarity=0.185 Sum_probs=100.0
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeeccc-------------------cchHH-----HHHHH--HhhcCCCeE
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENMI-------------------VSKNI-----VEQAI--AQADSRPLL 53 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~kI-------------------s~~~~-----ilp~L--~~~~~rPLl 53 (151)
|.||+||.|||| + .++||+|++.|..+ +++.+ +.|.+ +.+.+.+++
T Consensus 208 ~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvv 280 (529)
T 3iyg_A 208 YALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVI 280 (529)
T ss_pred eEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 689999999999 6 47899999999943 33332 66777 889999999
Q ss_pred EEEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeec---ee-ccCCCCCCCceeeEEE
Q 031885 54 IVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG---AT-NVSFMPLMLGSCKEVR 128 (151)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~---~~-l~~~~~~~LG~a~~v~ 128 (151)
|++++|+++|+..|+.|+ ++ ||. .|++.|+|||.+|||+++++ ++ +++++.++||+|+++.
T Consensus 281 i~~~~I~d~al~~L~~~g------I~av~~--------v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 281 LTTGGIDDMCLKYFVEAG------AMAVRR--------VLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred EECCCCCHHHHHHHHHcC------Cceecc--------CCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 999999999999999995 34 553 56788999999999999998 33 4678889999999998
Q ss_pred ---EcCCCeeeecCC
Q 031885 129 ---CSDLQFCFPHQS 140 (151)
Q Consensus 129 ---vtkd~T~~l~g~ 140 (151)
+.+++++++.|.
T Consensus 347 ~~~ig~~~~~~~~g~ 361 (529)
T 3iyg_A 347 QERICDDELILIKNT 361 (529)
T ss_pred EEEeCCceEEEEEcC
Confidence 999999999873
No 23
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.70 E-value=4e-18 Score=152.80 Aligned_cols=119 Identities=14% Similarity=0.265 Sum_probs=93.9
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeecccc-------------------------------chHHHHHHH--Hhh
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILENMIV-------------------------------SKNIVEQAI--AQA 47 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~kIs-------------------------------~~~~ilp~L--~~~ 47 (151)
|.||+||.||+ |..+++||+||++|.+++ .+++|+|++ +.+
T Consensus 213 ~v~dk~~~~~~------m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~ 286 (546)
T 3p9d_F 213 LVLDHGGRHPD------MPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCG 286 (546)
T ss_dssp CEESCCCCSSS------SCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred EEEeccccccc------CcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 67999999995 567899999999984432 466777766 445
Q ss_pred --cCCCeEEEEc-ccccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCcee
Q 031885 48 --DSRPLLIVAE-DVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSC 124 (151)
Q Consensus 48 --~~rPLlIIAe-dv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a 124 (151)
+++|+|||++ +|+++|+.+|+.|++ .+|+.. . +..|+|||.+|||+++++ ++++++++||+|
T Consensus 287 ~~~g~~~vIi~~k~I~~~Al~~L~~~gI-----~~vr~v-------~-~~~leria~~tGa~ii~~--l~~l~~~~LG~a 351 (546)
T 3p9d_F 287 MDPDKGFVIINQKGIDPMSLDVFAKHNI-----LALRRA-------K-RRNMERLQLVTGGEAQNS--VEDLSPQILGFS 351 (546)
T ss_dssp ------CEEEESSCCCHHHHHHHTTTTC-----EEECCC-------C-HHHHHHHHHTTTBCCCCC--CSSCSTTCCBCC
T ss_pred hccCCceEEEecCcCcHHHHHHHHHCCC-----eeEecC-------C-HHHHHHHHHHhCCEEecc--hhhCCHhHCCcc
Confidence 7899999997 999999999999975 226766 2 347899999999999985 788999999999
Q ss_pred eEE---EEcCCCeeeecCC
Q 031885 125 KEV---RCSDLQFCFPHQS 140 (151)
Q Consensus 125 ~~v---~vtkd~T~~l~g~ 140 (151)
+++ .+++++++|+.|.
T Consensus 352 ~~v~~~~ig~~~~~~i~g~ 370 (546)
T 3p9d_F 352 GLVYQETIGEEKFTYVTEN 370 (546)
T ss_dssp CCBCBCCCSSCCCEECSSC
T ss_pred cEEEEEEecCceEEEEecC
Confidence 999 7999999999874
No 24
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.70 E-value=7.6e-18 Score=152.96 Aligned_cols=118 Identities=21% Similarity=0.279 Sum_probs=98.1
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeec-----c--------ccchHHHHHHH-H------------hhcCCCeEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN-----M--------IVSKNIVEQAI-A------------QADSRPLLI 54 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~-----k--------Is~~~~ilp~L-~------------~~~~rPLlI 54 (151)
|+||||+ +++ +|..+++||+||++|. | |++++++.|++ . .+ .+|+||
T Consensus 223 mvfdk~~-----~~~-~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~-~g~~vI 295 (590)
T 3p9d_C 223 VLLNKDV-----VHP-KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILA-VRPTLV 295 (590)
T ss_dssp EEECCCC-----SCT-TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHT-TCCSEE
T ss_pred EEEeccc-----CCC-CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCcEE
Confidence 4566664 444 5888999999999999 5 67788888876 2 23 369999
Q ss_pred EEcc-cccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCce-eeEEE---E
Q 031885 55 VAED-VEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGS-CKEVR---C 129 (151)
Q Consensus 55 IAed-v~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~-a~~v~---v 129 (151)
||++ |+++|+.+|+-|+ .+ .||+.|++.|+|||++|||+++++ ++++++++||+ |+++. +
T Consensus 296 I~e~~I~d~Al~~L~k~~----------I~---av~~~~k~~le~ia~~TGa~iis~--l~~~~~~~LG~~a~~v~~~~i 360 (590)
T 3p9d_C 296 ITEKGVSDLAQHYLLKGG----------CS---VLRRVKKSDNNRIARVTGATIVNR--VEDLKESDVGTNCGLFKVEMI 360 (590)
T ss_dssp CCSSCCCTHHHHHHHHTT----------CC---CCCCCCHHHHHHHHHHHTCCCCSC--STTCCTTSCBCCCSEEECCEE
T ss_pred EecCCcCHHHHHHHHhcc----------ce---eeccCCHHHHHHHHHHhCCceeec--ccCCCHHHhCCcCCEEEEEEE
Confidence 9999 9999999998764 24 678889999999999999999985 78899999999 99996 6
Q ss_pred cCCCeeeecCC
Q 031885 130 SDLQFCFPHQS 140 (151)
Q Consensus 130 tkd~T~~l~g~ 140 (151)
++|+|+|+.|.
T Consensus 361 g~d~~~~i~g~ 371 (590)
T 3p9d_C 361 GDEYFSFLDNC 371 (590)
T ss_dssp TTEECEEECC-
T ss_pred cCcEEEEEeCC
Confidence 88999999874
No 25
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.69 E-value=1.5e-17 Score=149.43 Aligned_cols=121 Identities=12% Similarity=0.164 Sum_probs=100.3
Q ss_pred CccCCcccCccc-cCCCCceEEeeCceEEEeecc-------------ccchHHHHHH-----------H--HhhcCCCeE
Q 031885 1 MKLKWRPVSSYF-TNQKAKDCVLENPFLLILENM-------------IVSKNIVEQA-----------I--AQADSRPLL 53 (151)
Q Consensus 1 m~fdrGylSpyF-td~~~~~~ele~p~ILltd~k-------------Is~~~~ilp~-----------L--~~~~~rPLl 53 (151)
|+|||||+|||| +++++ ++||+||++|.+ |++++++.|+ + +.+.+.+++
T Consensus 218 ~~~dk~~~s~yf~~~~~~----~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPKK----FNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCSC----CSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCccc----ccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 689999999999 99886 999999999998 7888888884 4 668899999
Q ss_pred EEEcccccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEE---c
Q 031885 54 IVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRC---S 130 (151)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~v---t 130 (151)
|++++|++ +++..+| .+|.+- +++.|+..|++||.+|||+++++ +++++.++||+|+++.+ .
T Consensus 294 i~~~~I~d--la~~~L~-~~gI~~----------v~~v~k~~lerIa~~tGa~iis~--l~~l~~~~LG~a~~v~~~~ig 358 (550)
T 3p9d_G 294 LSKLPIGD--LATQFFA-DRNIFC----------AGRVSADDMNRVIQAVGGSIQST--TSDIKPEHLGTCALFEEMQIG 358 (550)
T ss_dssp EESSCCCH--HHHHTTG-GGTCEE----------EECCCTTHHHHHHHHTCCCCBSS--GGGCCGGGCCCCSBCCCCCCS
T ss_pred EECCCccH--HHHHHHH-HcCCcc----------ccCcCHHHHHHHHHHhCCceecc--hhhCCHHHcCCceEEEEEEeC
Confidence 99999986 5556667 356543 23445678999999999999985 77888999999999988 5
Q ss_pred CCCeeeecCC
Q 031885 131 DLQFCFPHQS 140 (151)
Q Consensus 131 kd~T~~l~g~ 140 (151)
+++++++.|-
T Consensus 359 ~e~~~~~~g~ 368 (550)
T 3p9d_G 359 SERYNLFQGC 368 (550)
T ss_dssp SSCCEEEBCC
T ss_pred CeEEEEEecC
Confidence 7888888773
No 26
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.67 E-value=2.2e-17 Score=147.32 Aligned_cols=116 Identities=20% Similarity=0.171 Sum_probs=99.8
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEe------------ecc--ccchHHH-----------HHHH--HhhcCCCeE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLIL------------ENM--IVSKNIV-----------EQAI--AQADSRPLL 53 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILlt------------d~k--Is~~~~i-----------lp~L--~~~~~rPLl 53 (151)
|+|||||.||| ++++ +||+||++ +.+ |++++++ .|.+ +.+.+.|++
T Consensus 212 ~~~dk~~~~~~---p~~~----~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 212 FILAKKFGNNQ---PKRI----ENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCCSCCCSSSC---CSCC----SSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEEecccCCCC---Ceee----ecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 78999999998 5544 68888885 445 7788776 5677 788999999
Q ss_pred EEEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEE---E
Q 031885 54 IVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVR---C 129 (151)
Q Consensus 54 IIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~---v 129 (151)
|++++|+++|+.+|..|+ ++ |+.| ++++ |+|||..|||+++++ +++++.+.||+|+++. +
T Consensus 285 i~~~~I~~~al~~L~~~~------i~av~~~---~~~d-----le~ia~~tGa~iv~~--~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDLG------INSIEHA---DFEG-----VERLALVTGGEVVST--FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHTC------BCCCCCC---HHHH-----HHHHHHHTCCCCCST--TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHCC------CEEEecC---CHHH-----HHHHHHHhCCEEecc--hhhCCHHHCCCCcEEEEEEe
Confidence 999999999999999885 45 9999 7776 899999999999987 6788889999999998 7
Q ss_pred cCCCeeeecC
Q 031885 130 SDLQFCFPHQ 139 (151)
Q Consensus 130 tkd~T~~l~g 139 (151)
.+++++++.|
T Consensus 349 g~~~~~~~~g 358 (527)
T 3p9d_B 349 GEQPFLKFSG 358 (527)
T ss_dssp SSCCBCCBCS
T ss_pred cceEEEEEEC
Confidence 7899999987
No 27
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.66 E-value=1.1e-16 Score=142.35 Aligned_cols=122 Identities=20% Similarity=0.175 Sum_probs=102.8
Q ss_pred CccCCcccCccc-cCCC-CceEEeeCce-EEEeecc----ccchHHHHHH-------H------HhhcCCCeEEEEcccc
Q 031885 1 MKLKWRPVSSYF-TNQK-AKDCVLENPF-LLILENM----IVSKNIVEQA-------I------AQADSRPLLIVAEDVE 60 (151)
Q Consensus 1 m~fdrGylSpyF-td~~-~~~~ele~p~-ILltd~k----Is~~~~ilp~-------L------~~~~~rPLlIIAedv~ 60 (151)
|+|||||.| | ++.+ .+.+.|+.|| ++.+|.| |++++|+.|+ | +.+.++||+|++++|+
T Consensus 205 ~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~ 282 (512)
T 3iyg_Q 205 MVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVA 282 (512)
T ss_pred EEEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCcc
Confidence 689999987 8 7777 6778899999 9999999 9999999998 4 5678999999999998
Q ss_pred cchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEcCC---Ceee
Q 031885 61 DKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCSDL---QFCF 136 (151)
Q Consensus 61 ~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vtkd---~T~~ 136 (151)
+.++.. +|+ .+++ ||.| ++++ |+|||.+|||+++++ +++++.++||+|+++.+++. +.++
T Consensus 283 ~la~~~--l~k----~~I~av~~~---~~~d-----le~ia~~tGa~iis~--l~~~~~~~LG~a~~v~~~~~g~~~~~~ 346 (512)
T 3iyg_Q 283 DMALHY--ANK----YNIMLVRLN---SKWD-----LRRLCKTVGATALPR--LNPPVLEEMGHCDSVYLSEVGDTQVVV 346 (512)
T ss_pred HHHHHH--HHH----CCeEEEEeC---CHHH-----HHHHHHHhCCEEecc--cccCCHHHCCcccEEEEEEeCCeEEEE
Confidence 865443 333 5678 9999 8766 899999999999985 77888999999999999865 5566
Q ss_pred ecCC
Q 031885 137 PHQS 140 (151)
Q Consensus 137 l~g~ 140 (151)
+.|.
T Consensus 347 ~~~~ 350 (512)
T 3iyg_Q 347 FKHE 350 (512)
T ss_pred EEcc
Confidence 6664
No 28
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.63 E-value=2.6e-16 Score=140.26 Aligned_cols=119 Identities=12% Similarity=0.206 Sum_probs=98.3
Q ss_pred CccCCcccCccccCCCCceEEeeCceEEEeec-------------cccchHHHHHHH-H-----------hhcCCCeEEE
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLENPFLLILEN-------------MIVSKNIVEQAI-A-----------QADSRPLLIV 55 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele~p~ILltd~-------------kIs~~~~ilp~L-~-----------~~~~rPLlII 55 (151)
|+|||||.||+ |..+++||+||++|. +|++++++.|++ . ....+|.|||
T Consensus 206 ~v~dk~~~~~~------m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi 279 (515)
T 3iyg_G 206 VMINKDVTHPR------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVI 279 (515)
T ss_pred EEEeCCCCCCC------CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 68999999995 567899999999999 999999999988 1 1235799999
Q ss_pred Ecc-cccchhhhhhcccccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCce-eeEEEEcCC-
Q 031885 56 AED-VEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGS-CKEVRCSDL- 132 (151)
Q Consensus 56 Aed-v~~eaL~tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~-a~~v~vtkd- 132 (151)
+++ |++.|+..|.- ..++ .+++.|++.|+|||.+|||+++++ +++++.++||+ |+++++.+.
T Consensus 280 ~~~~I~~~al~~L~~------~~I~-------av~~~~k~~leria~~tGa~ii~~--l~~l~~~~LG~~a~~v~~~~~g 344 (515)
T 3iyg_G 280 TEKGISDLAQHYLMR------ANIT-------AIRRVRKTDNNRIARACGARIVSR--PEELREEDVGTGAGLLEIKKIG 344 (515)
T ss_pred ECCccCHHHHHHHHH------CCce-------eeccCCHHHHHHHHHHhCCeeecc--ccccChhhcCCcccEEEEEEEC
Confidence 996 88888887652 2233 346778899999999999999987 67888999999 999998775
Q ss_pred --CeeeecCC
Q 031885 133 --QFCFPHQS 140 (151)
Q Consensus 133 --~T~~l~g~ 140 (151)
+++|+.|.
T Consensus 345 ~~~~~~i~g~ 354 (515)
T 3iyg_G 345 DEYFTFITEC 354 (515)
T ss_pred CceEEEEeCC
Confidence 68898773
No 29
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.53 E-value=3e-15 Score=135.02 Aligned_cols=116 Identities=12% Similarity=0.070 Sum_probs=98.0
Q ss_pred CccCCcccCccccCCCCceEEee---CceEEEeecc-------------ccchHHHHH-----------HH--HhhcCCC
Q 031885 1 MKLKWRPVSSYFTNQKAKDCVLE---NPFLLILENM-------------IVSKNIVEQ-----------AI--AQADSRP 51 (151)
Q Consensus 1 m~fdrGylSpyFtd~~~~~~ele---~p~ILltd~k-------------Is~~~~ilp-----------~L--~~~~~rP 51 (151)
|.|||+|. +|..+++ ||+||++|.+ |++.+++.| .+ +.+.+.+
T Consensus 226 ~v~dk~~~--------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~ 297 (568)
T 3p9d_H 226 MVFNREPE--------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVE 297 (568)
T ss_dssp CCBSSCBS--------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeccc--------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 56777772 4555677 9999999998 889999988 44 6788999
Q ss_pred eEEEEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc
Q 031885 52 LLIVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS 130 (151)
Q Consensus 52 LlIIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt 130 (151)
|+|++++|+++|+..|.-|+ ++ ||.| ++ ..|+|||.+|||+++++ +++++.++||+|++|.+.
T Consensus 298 vvi~~~~I~~~al~~L~~~g------I~av~~v---~~-----~~leria~~tGa~ivs~--l~~l~~~~LG~a~~v~~~ 361 (568)
T 3p9d_H 298 CIVAGAGVGELALHYLNRYG------ILVLKVP---SK-----FELRRLCRVCGATPLPR--LGAPTPEELGLVETVKTM 361 (568)
T ss_dssp EEEECSCCCHHHHHHHHHHT------CEEECCC---CH-----HHHHHHHHHHSCCCCSS--SSCCCGGGCEECSCCCCC
T ss_pred EEEECCCcChHHHHHHHHCC------eEEEecC---CH-----HHHHHHHHHhCCEEEec--cccCCHHHCCcceEEEEE
Confidence 99999999999999998763 56 9999 53 35899999999999987 677889999999999888
Q ss_pred C---CCeeeecCC
Q 031885 131 D---LQFCFPHQS 140 (151)
Q Consensus 131 k---d~T~~l~g~ 140 (151)
+ ++++++.|.
T Consensus 362 ~ig~~~~~~~~g~ 374 (568)
T 3p9d_H 362 EIGGDRVTVFKQE 374 (568)
T ss_dssp EETTEECBCCCCC
T ss_pred EecCceEEEEecC
Confidence 7 889999874
No 30
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=97.88 E-value=3.9e-05 Score=58.80 Aligned_cols=107 Identities=15% Similarity=0.236 Sum_probs=76.1
Q ss_pred ceEEeeCceEEEeecccc-------------chHHHHHHH-------------HhhcCCCeEEEEcccccchhhhhhccc
Q 031885 18 KDCVLENPFLLILENMIV-------------SKNIVEQAI-------------AQADSRPLLIVAEDVEDKLIGSLILGK 71 (151)
Q Consensus 18 ~~~ele~p~ILltd~kIs-------------~~~~ilp~L-------------~~~~~rPLlIIAedv~~eaL~tLv~Nk 71 (151)
|.-..+||.|++.|-.++ +.+++..++ +.+.+--+++.-..|++.|+..|.-+.
T Consensus 15 mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~g 94 (159)
T 1ass_A 15 MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG 94 (159)
T ss_dssp SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESSCBCHHHHHHHHHTT
T ss_pred CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECCccCHHHHHHHHHCC
Confidence 455678999999987554 455555443 455677788888899998888665432
Q ss_pred ccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCceeeEEEEc---CCCeeeecC
Q 031885 72 TCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGSCKEVRCS---DLQFCFPHQ 139 (151)
Q Consensus 72 ~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~a~~v~vt---kd~T~~l~g 139 (151)
+-+ |+-. ++.-|+-||-.|||+++++ +++++.+.||+|..+... .++.+++.|
T Consensus 95 ----I~~-v~~v--------~~~dleria~atGa~iv~~--~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g 150 (159)
T 1ass_A 95 ----IYA-VRRV--------KKSDMEKLAKATGAKIVTD--LDDLTPSVLGEAETVEERKIGDDRMTFVMG 150 (159)
T ss_dssp ----CEE-ECSC--------CHHHHHHHHHHHTCCCBSS--TTSCCTTSCEEEEEEEEEEETTEEEEEEES
T ss_pred ----CEE-EccC--------CHHHHHHHHHHhCCeeeCc--cccCCcccCccceEEEEEEECCeEEEEEEC
Confidence 223 3333 1345788999999999986 567888999999988764 466777766
No 31
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=97.42 E-value=0.00056 Score=53.02 Aligned_cols=108 Identities=13% Similarity=0.170 Sum_probs=74.0
Q ss_pred CceEEeeCceEEEeecccc-------------chHHHHHHH-------------HhhcCCCeEEEEcccccchhhhhhcc
Q 031885 17 AKDCVLENPFLLILENMIV-------------SKNIVEQAI-------------AQADSRPLLIVAEDVEDKLIGSLILG 70 (151)
Q Consensus 17 ~~~~ele~p~ILltd~kIs-------------~~~~ilp~L-------------~~~~~rPLlIIAedv~~eaL~tLv~N 70 (151)
.|.-..+||.|++.|-.++ +.+++-.++ +.+.+--+++.-..|++.|+..|.-+
T Consensus 20 ~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~ 99 (178)
T 1gml_A 20 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRA 99 (178)
T ss_dssp TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHT
T ss_pred CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEECCcccHHHHHHHHHC
Confidence 3555678999999887655 223333332 45567778888889999888877544
Q ss_pred cccccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeeceeccCCCCCCCce-eeEEE---EcCCCeeeecC
Q 031885 71 KTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATNVSFMPLMLGS-CKEVR---CSDLQFCFPHQ 139 (151)
Q Consensus 71 k~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~~~l~~~~~~~LG~-a~~v~---vtkd~T~~l~g 139 (151)
. +-+ |+-. ++.-|+-||-.|||+++++ +++++.+.||+ |+.+. +..+..+++.|
T Consensus 100 g----I~~-vr~v--------~~~dleria~atGa~iv~~--~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~g 157 (178)
T 1gml_A 100 N----VTA-IRRV--------RKTDNNRIARACGARIVSR--PEELREDDVGTGAGLLEIKKIGDEYFTFITD 157 (178)
T ss_dssp T----CEE-ECCC--------CHHHHHHHHHHHCCCEESC--GGGCCGGGSBCCEEEEEEEEETTEEEEEEEE
T ss_pred C----CEE-EecC--------CHHHHHHHHHHhCCeEeCC--hhhCChhhhCCcccEEEEEEECCeEEEEEEC
Confidence 3 222 3333 1335788999999999987 56778889999 88877 44567777776
No 32
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=38.93 E-value=8.5 Score=28.84 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=23.3
Q ss_pred CchhhHhhhhhhhhhhhCceEeecee
Q 031885 87 DYEKETKAIMDDLAILTGGQVLNGAT 112 (151)
Q Consensus 87 gfGd~Rk~~L~DiAilTGg~vi~~~~ 112 (151)
+.|..|++.|+.+|.--|++|...++
T Consensus 22 kmG~sRr~fL~~la~~kGf~v~~~~S 47 (133)
T 2dun_A 22 RMGRSRRAFLTGLARSKGFRVLDACS 47 (133)
T ss_dssp HHCSHHHHHHHHHHHHHTEEECSSCC
T ss_pred CcCHHHHHHHHHHHHhcCCEeccccC
Confidence 78899999999999999999987744
No 33
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.16 E-value=21 Score=25.88 Aligned_cols=26 Identities=23% Similarity=0.238 Sum_probs=23.5
Q ss_pred CchhhHhhhhhhhhhhhCceEeecee
Q 031885 87 DYEKETKAIMDDLAILTGGQVLNGAT 112 (151)
Q Consensus 87 gfGd~Rk~~L~DiAilTGg~vi~~~~ 112 (151)
+.|..|.+++..+|...||+|...++
T Consensus 32 ~~g~~R~~~l~~l~r~~G~~V~~~ls 57 (120)
T 2coe_A 32 KMGTTRRALLMELARRKGFRVENELS 57 (120)
T ss_dssp TTCHHHHHHHHHHHHHHTCEECSSCC
T ss_pred ccchHHHHHHHHHHHHcCCEEeeccC
Confidence 88999999999999999999997743
No 34
>2pt7_G HP1451, hypothetical protein; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori}
Probab=33.02 E-value=19 Score=27.13 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=26.0
Q ss_pred hhhcccccccceEEeecCCCCCchhhHhhhhhhhhh
Q 031885 66 SLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAI 101 (151)
Q Consensus 66 tLv~Nk~rg~l~v~VkaP~~~gfGd~Rk~~L~DiAi 101 (151)
.+++|+..+ ++|.+-+- +|=++|++.|+.+|-
T Consensus 63 ~~~vn~~~~-~~V~LDve---~YRerReetL~~lA~ 94 (152)
T 2pt7_G 63 FNWIHPTYG-YSIRLEIS---TFLQNQEKVMDTQLQ 94 (152)
T ss_dssp HHHHHHHHS-CEEEEEET---THHHHHHHHHHHHHH
T ss_pred HHHhhhcCC-ceEEEEhH---HhHHHHHHHHHHHHH
Confidence 356788766 66668778 999999999999985
No 35
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=32.91 E-value=15 Score=24.44 Aligned_cols=42 Identities=21% Similarity=0.123 Sum_probs=23.8
Q ss_pred hHHHHHHHHhhcCCCeEEEEcccccchhhhhhcccccccceEE
Q 031885 37 KNIVEQAIAQADSRPLLIVAEDVEDKLIGSLILGKTCLQNKVS 79 (151)
Q Consensus 37 ~~~ilp~L~~~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~v~ 79 (151)
.++.+.. +.+.+--|+|||+|++++....+..-=....++++
T Consensus 16 ~~~v~ka-i~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~ 57 (82)
T 3v7e_A 16 TKQTVKA-LKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVS 57 (82)
T ss_dssp HHHHHHH-HTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHH-HHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEE
Confidence 4444443 23333589999999999655443322223346665
No 36
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=24.79 E-value=38 Score=27.04 Aligned_cols=67 Identities=10% Similarity=0.025 Sum_probs=41.9
Q ss_pred ccCCcccCccc-cCCCCceEEeeCceEEEeeccccchHHHHHHH---HhhcC-CCeEEEEcccccchhhhhhccccc---
Q 031885 2 KLKWRPVSSYF-TNQKAKDCVLENPFLLILENMIVSKNIVEQAI---AQADS-RPLLIVAEDVEDKLIGSLILGKTC--- 73 (151)
Q Consensus 2 ~fdrGylSpyF-td~~~~~~ele~p~ILltd~kIs~~~~ilp~L---~~~~~-rPLlIIAedv~~eaL~tLv~Nk~r--- 73 (151)
.+-.|..|||| +. + .+.+|. ..+.+...+ +...+ .+=+|++-+..|-.+++.+..++.
T Consensus 49 ~L~SG~~Sp~y~d~--~---ll~~p~---------~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~ 114 (238)
T 3n2l_A 49 TLKSGRKSPYFFNA--G---LFNTGR---------DLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHH 114 (238)
T ss_dssp ECSSSCEEEEEECG--G---GCCBHH---------HHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHS
T ss_pred EecCCCcccEEEEC--C---CCCCHH---------HHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhh
Confidence 35689999999 53 2 122332 133344444 22323 577999999999999999988762
Q ss_pred -ccceEE-eec
Q 031885 74 -LQNKVS-IAK 82 (151)
Q Consensus 74 -g~l~v~-Vka 82 (151)
-.++.+ ++-
T Consensus 115 g~~vp~~~~RK 125 (238)
T 3n2l_A 115 DVDTPYCFNRK 125 (238)
T ss_dssp CCCCBEEEECC
T ss_pred CCCccEEEEee
Confidence 246677 554
No 37
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=23.39 E-value=52 Score=22.41 Aligned_cols=19 Identities=16% Similarity=0.321 Sum_probs=14.7
Q ss_pred CCCeEEEEcccccchhhhh
Q 031885 49 SRPLLIVAEDVEDKLIGSL 67 (151)
Q Consensus 49 ~rPLlIIAedv~~eaL~tL 67 (151)
+--|+|||+|.++.....+
T Consensus 35 ka~lViiA~D~~~~~~~~i 53 (101)
T 3v7q_A 35 RAKLVLLTEDASSNTAKKV 53 (101)
T ss_dssp CCSEEEEETTSCHHHHHHH
T ss_pred ceeEEEEeccccccchhhh
Confidence 4589999999998765554
No 38
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=22.30 E-value=86 Score=21.77 Aligned_cols=61 Identities=7% Similarity=0.046 Sum_probs=41.3
Q ss_pred hcCCCeEEEEcccccchhhhhhcccccccceEE-eecCCCCCchhhHhhhhhhhhhhhCceEeec
Q 031885 47 ADSRPLLIVAEDVEDKLIGSLILGKTCLQNKVS-IAKPHEDDYEKETKAIMDDLAILTGGQVLNG 110 (151)
Q Consensus 47 ~~~rPLlIIAedv~~eaL~tLv~Nk~rg~l~v~-VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~ 110 (151)
..-+|.+-|+.+==.|++-.=+-+.++. =..+ ||... ...+.|+++.+.||-.|||.++..
T Consensus 16 h~l~pvv~IGk~GlT~~vi~ei~~aL~~-~ELIKVkvl~--~~~~~~~e~a~~la~~t~a~~Vq~ 77 (98)
T 1jo0_A 16 HHLNPVVMLGGNGLTEGVLAEIENALNH-HELIKVKVAG--ADRETKQLIINAIVRETKAAQVQT 77 (98)
T ss_dssp TTBCCSEEECTTCSCHHHHHHHHHHHHH-HSEEEEEETT--CCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHHHHH-CCeEEEEEeC--CCHHHHHHHHHHHHHHhCCEEEEE
Confidence 3447999998765444444444444443 2334 56652 356889999999999999998866
No 39
>2ls2_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=26.97 E-value=20 Score=19.55 Aligned_cols=10 Identities=30% Similarity=0.531 Sum_probs=7.6
Q ss_pred cceeeeeccC
Q 031885 142 PLVTSCVGVF 151 (151)
Q Consensus 142 ~~~~~~~~~~ 151 (151)
-++-||+++|
T Consensus 6 ~~v~Sci~if 15 (26)
T 2ls2_A 6 EMAGAFVAVF 15 (26)
Confidence 4678898876
No 40
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=21.24 E-value=28 Score=26.42 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=19.5
Q ss_pred CCeEEEEcccccchhhhhhccccc
Q 031885 50 RPLLIVAEDVEDKLIGSLILGKTC 73 (151)
Q Consensus 50 rPLlIIAedv~~eaL~tLv~Nk~r 73 (151)
.+-+|++-+-.+-.++..+..++.
T Consensus 68 ~~d~vv~v~~~g~~~a~~la~~l~ 91 (211)
T 2aee_A 68 EVEVIAGTATAGIPHGAIIADKMT 91 (211)
T ss_dssp TCCEEEEETTTTHHHHHHHHHHHT
T ss_pred CCCEEEEeccCcHHHHHHHHHHhC
Confidence 577899999888888888877764
No 41
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=20.11 E-value=80 Score=22.29 Aligned_cols=60 Identities=10% Similarity=0.063 Sum_probs=39.7
Q ss_pred hcCCCeEEEEcccccchhhhhhccccc--ccceEEeecCCCCCchhhHhhhhhhhhhhhCceEeec
Q 031885 47 ADSRPLLIVAEDVEDKLIGSLILGKTC--LQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNG 110 (151)
Q Consensus 47 ~~~rPLlIIAedv~~eaL~tLv~Nk~r--g~l~v~VkaP~~~gfGd~Rk~~L~DiAilTGg~vi~~ 110 (151)
..-+|.+-|+.+==.|++-.=+-+.++ ..+| ||... ..++.|+++.+.||-.|||.++..
T Consensus 15 h~Lkpvv~IGK~GlTe~vi~ei~~aL~~hELIK--Vkvl~--~~~~d~~e~a~~la~~t~a~vVq~ 76 (104)
T 1rq8_A 15 HNIDPIFQIGKGGINENMIKQIDDTLENRELIK--VHVLQ--NNFDDKKELAETLSEATRSELVQV 76 (104)
T ss_dssp TSSCCSCEECSSSCCHHHHHHHHHHHHHSSEEE--EEECC--CCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHHHHHCCcEE--EEEeC--CCHHHHHHHHHHHHHHhCCEEEEE
Confidence 344799999876544443333334433 3333 45552 357889999999999999998865
No 42
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=20.05 E-value=32 Score=26.35 Aligned_cols=67 Identities=13% Similarity=-0.013 Sum_probs=41.8
Q ss_pred ccCCcccCccccCCCCceEEeeCceEEEeeccccchHHHHHHH---Hhhc-CCCeEEEEcccccchhhhhhcccc----c
Q 031885 2 KLKWRPVSSYFTNQKAKDCVLENPFLLILENMIVSKNIVEQAI---AQAD-SRPLLIVAEDVEDKLIGSLILGKT----C 73 (151)
Q Consensus 2 ~fdrGylSpyFtd~~~~~~ele~p~ILltd~kIs~~~~ilp~L---~~~~-~rPLlIIAedv~~eaL~tLv~Nk~----r 73 (151)
.+.+|..||||-|. + ++.+.+ ..+.+...| +.+. ..+-+|++-+..|-.++..+..++ .
T Consensus 24 ~l~SG~~s~~y~d~-~----------ll~~~~--~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~ 90 (213)
T 1lh0_A 24 TLKSGRKSPYFFNA-G----------LFNTGR--DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHD 90 (213)
T ss_dssp ECTTSCEEEEEECG-G----------GCCBHH--HHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHC
T ss_pred EECCCCcccEEEec-C----------ccCCHH--HHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhC
Confidence 35688999998332 1 122221 234455555 3332 357799999999999999988887 2
Q ss_pred ccceEE-ee
Q 031885 74 LQNKVS-IA 81 (151)
Q Consensus 74 g~l~v~-Vk 81 (151)
-.++++ ++
T Consensus 91 ~~~~~~~~r 99 (213)
T 1lh0_A 91 KDLPYCFNR 99 (213)
T ss_dssp CCCBEEEEC
T ss_pred CCCCEEEEE
Confidence 235666 55
Done!