Query 031888
Match_columns 151
No_of_seqs 107 out of 930
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:33:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031888.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031888hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vjg_A Major allergen DAU C 1; 100.0 3.3E-41 1.1E-45 247.9 18.4 144 1-150 1-153 (154)
2 4a8u_A Major pollen allergen B 100.0 1.7E-40 5.9E-45 245.2 18.3 143 3-150 4-153 (159)
3 3ie5_A Phenolic oxidative coup 100.0 3.9E-40 1.3E-44 244.6 17.7 144 1-150 7-159 (165)
4 2flh_A Cytokinin-specific bind 100.0 6.4E-40 2.2E-44 241.1 17.6 144 1-150 1-152 (155)
5 2wql_A Major allergen DAU C 1; 100.0 9.9E-40 3.4E-44 240.0 18.5 145 1-151 1-154 (154)
6 3rws_A MTN13 protein; zeatin, 100.0 1.4E-39 4.7E-44 242.3 18.7 143 1-150 6-159 (168)
7 2i9y_A Major latex protein-lik 100.0 1.8E-39 6.1E-44 241.1 14.8 147 1-151 16-165 (166)
8 1e09_A PRU AV 1; allergen, maj 100.0 1.2E-38 4E-43 235.0 17.8 144 2-150 3-153 (159)
9 1tw0_A Pathogenesis-related cl 100.0 1E-37 3.5E-42 229.6 20.4 143 2-150 3-152 (157)
10 2qim_A PR10.2B; trans-zeatin, 100.0 4.7E-38 1.6E-42 231.6 18.4 144 1-150 1-153 (158)
11 1icx_A Protein LLR18A, LLPR10. 100.0 1.9E-37 6.5E-42 227.7 17.5 142 2-150 3-151 (155)
12 2vq5_A S-norcoclaurine synthas 100.0 1E-37 3.6E-42 237.9 13.8 143 2-150 29-178 (201)
13 3rt2_A Abscisic acid receptor 100.0 6.3E-30 2.1E-34 192.5 18.1 116 4-127 29-148 (183)
14 3jrs_A PYL1, putative uncharac 100.0 8.9E-30 3E-34 194.8 15.9 111 5-122 57-169 (208)
15 3f08_A Uncharacterized protein 100.0 9E-29 3.1E-33 179.6 18.5 130 1-148 1-136 (146)
16 3oqu_A Abscisic acid receptor 100.0 7.7E-29 2.6E-33 189.2 18.6 119 2-127 50-172 (205)
17 3p51_A Uncharacterized protein 100.0 4.5E-28 1.5E-32 178.7 18.8 134 1-148 1-140 (160)
18 3kl1_A PYL2, putative uncharac 100.0 4.5E-28 1.5E-32 183.3 18.9 115 5-127 38-158 (190)
19 3k3k_A Abscisic acid receptor 100.0 2.3E-28 8E-33 187.2 17.5 108 5-122 53-162 (211)
20 3oji_A Abscisic acid receptor 100.0 2.9E-27 9.8E-32 178.1 17.7 131 5-142 33-174 (189)
21 1vjh_A BET V I allergen family 99.9 3.1E-26 1.1E-30 162.0 14.9 114 2-150 5-119 (122)
22 3qrz_A Abscisic acid receptor 99.9 2.3E-28 7.9E-33 188.7 -0.4 114 6-127 82-197 (223)
23 2le1_A Uncharacterized protein 99.9 7.4E-25 2.5E-29 158.2 16.1 112 1-123 1-114 (151)
24 2d4r_A Hypothetical protein TT 99.7 1.5E-16 5E-21 111.2 16.5 137 1-149 1-143 (147)
25 3tfz_A Cyclase; helix-GRIP, BE 99.7 2.8E-15 9.5E-20 110.5 16.5 116 1-126 4-120 (172)
26 3ijt_A SMU.440, putative uncha 99.7 2.8E-15 9.6E-20 109.4 15.3 106 1-121 17-122 (155)
27 3tl1_A WHIE ORF VI, polyketide 99.7 8.9E-15 3E-19 107.2 17.1 115 1-127 1-119 (159)
28 3tvq_A Multifunctional cyclase 99.6 1.8E-14 6.1E-19 106.6 17.3 114 1-127 1-119 (169)
29 1t17_A Conserved hypothetical 99.6 3.4E-14 1.2E-18 101.6 11.4 136 1-148 1-142 (148)
30 3ggn_A Uncharacterized protein 99.5 1.8E-12 6.1E-17 93.7 16.0 110 3-125 5-115 (155)
31 2pcs_A Conserved protein; stru 99.5 3.5E-12 1.2E-16 92.0 14.9 139 3-149 4-147 (162)
32 2ns9_A Hypothetical protein AP 99.4 1.1E-11 3.7E-16 88.5 15.6 113 3-125 14-126 (157)
33 1z94_A Conserved hypothetical 99.3 3.1E-10 1.1E-14 79.9 16.9 139 1-149 2-142 (147)
34 3p9v_A Uncharacterized protein 99.3 2.1E-10 7.3E-15 83.4 14.7 134 3-148 8-149 (161)
35 1xn6_A Hypothetical protein BC 99.2 2.8E-10 9.4E-15 80.5 11.5 126 1-149 7-142 (143)
36 2leq_A Uncharacterized protein 99.2 1.1E-09 3.8E-14 76.6 14.6 133 3-149 6-141 (146)
37 2lcg_A Uncharacterized protein 99.1 6.4E-09 2.2E-13 73.5 15.9 128 3-149 2-132 (142)
38 1xuv_A Hypothetical protein MM 99.1 1.5E-08 5.2E-13 74.3 17.4 138 3-149 23-166 (178)
39 2il5_A Hypothetical protein; s 99.1 8E-09 2.7E-13 75.0 14.8 140 3-149 15-166 (171)
40 2l8o_A Uncharacterized protein 99.0 3.4E-08 1.2E-12 70.1 15.9 129 3-149 3-134 (144)
41 3rd6_A MLL3558 protein; struct 99.0 3.7E-08 1.3E-12 71.2 16.1 138 3-150 9-151 (161)
42 3eli_A AHSA1, AHA1 domain prot 99.0 9.6E-09 3.3E-13 73.4 12.8 139 1-149 1-144 (152)
43 1xn5_A BH1534 unknown conserve 99.0 3.9E-09 1.3E-13 75.1 10.5 94 2-119 5-98 (146)
44 3q6a_A Uncharacterized protein 99.0 1.7E-08 6E-13 70.6 13.0 123 3-149 2-124 (135)
45 3pu2_A Uncharacterized protein 99.0 1.3E-07 4.5E-12 68.6 18.1 135 3-150 14-156 (164)
46 3q64_A MLL3774 protein; struct 99.0 5.1E-08 1.8E-12 70.5 15.6 137 3-149 10-151 (162)
47 3put_A Hypothetical conserved 98.9 4.2E-08 1.4E-12 71.5 14.4 139 3-149 10-151 (166)
48 2lgh_A Uncharacterized protein 98.9 1.1E-07 3.6E-12 67.5 16.0 128 3-149 2-133 (144)
49 2ldk_A Uncharacterized protein 98.9 2.2E-08 7.5E-13 72.9 12.4 141 3-149 13-159 (172)
50 2lak_A AHSA1-like protein RHE_ 98.9 4.7E-09 1.6E-13 75.6 8.0 129 3-149 10-139 (160)
51 1xfs_A NC_840354, conserved hy 98.9 1.2E-07 4E-12 69.4 14.3 137 3-149 11-165 (178)
52 3q63_A MLL2253 protein; struct 98.8 8.2E-08 2.8E-12 68.7 12.6 131 2-149 9-140 (151)
53 2kew_A Uncharacterized protein 98.8 7.3E-09 2.5E-13 74.2 6.3 123 3-149 11-143 (152)
54 3uid_A Putative uncharacterize 98.8 2.7E-07 9.2E-12 67.4 14.4 137 3-150 14-161 (168)
55 2lf2_A Uncharacterized protein 98.8 5.5E-07 1.9E-11 65.8 16.0 134 3-149 17-163 (175)
56 2nn5_A Hypothetical protein EF 98.8 1.6E-07 5.6E-12 69.7 13.4 120 3-149 37-157 (184)
57 2l9p_A Uncharacterized protein 98.7 1.4E-07 4.7E-12 68.2 10.3 137 3-150 9-155 (164)
58 2qpv_A Uncharacterized protein 98.7 3.4E-07 1.2E-11 66.6 12.0 97 1-119 26-125 (156)
59 2k5g_A Uncharacterized protein 98.7 1.6E-07 5.5E-12 69.9 9.6 128 2-149 19-161 (191)
60 3ni8_A PFC0360W protein; heat 98.5 5.5E-06 1.9E-10 59.9 14.7 130 3-149 20-153 (158)
61 3qsz_A STAR-related lipid tran 98.5 4.3E-05 1.5E-09 56.0 18.4 139 2-149 27-178 (189)
62 1x53_A Activator of 90 kDa hea 98.4 6E-07 2.1E-11 63.4 7.4 124 3-149 12-136 (145)
63 3oh8_A Nucleoside-diphosphate 98.4 1.5E-06 5.3E-11 73.3 9.9 109 3-123 2-114 (516)
64 4fpw_A CALU16; structural geno 98.4 1.5E-06 5E-11 64.6 8.6 118 3-148 22-139 (181)
65 2luz_A CALU16; structural geno 98.2 2.9E-05 1E-09 58.1 11.8 119 3-149 33-151 (192)
66 1ln1_A PC-TP, phosphatidylchol 98.1 0.00018 6E-09 53.6 14.8 142 3-151 53-210 (214)
67 1zxf_A CALC; SELF-sacrificing 98.0 4.9E-05 1.7E-09 54.4 9.7 134 1-149 3-149 (155)
68 2lio_A Uncharacterized protein 98.0 0.00019 6.5E-09 50.9 11.9 121 3-148 5-126 (136)
69 2ffs_A Hypothetical protein PA 97.0 0.023 7.8E-07 41.1 12.5 107 3-126 2-118 (157)
70 1em2_A MLN64 protein; beta bar 96.3 0.22 7.6E-06 37.1 14.8 142 5-150 69-225 (229)
71 1jss_A Stard4, cholesterol-reg 96.2 0.2 6.8E-06 37.3 13.7 141 4-149 69-222 (224)
72 2e3n_A Lipid-transfer protein 96.0 0.18 6.1E-06 38.3 12.7 140 5-149 76-245 (255)
73 3p0l_A Steroidogenic acute reg 96.0 0.31 1.1E-05 36.1 15.0 140 4-149 57-213 (221)
74 2r55_A STAR-related lipid tran 95.4 0.57 1.9E-05 34.8 16.3 144 4-151 69-229 (231)
75 3fo5_A Thioesterase, adipose a 95.1 0.39 1.3E-05 37.1 11.4 114 4-122 90-216 (258)
76 2pso_A STAR-related lipid tran 73.9 25 0.00085 26.1 17.2 136 4-148 77-225 (237)
77 2ejx_A ST0812; arcaea, unknown 38.2 15 0.00051 25.7 1.8 37 1-38 4-41 (139)
78 2kku_A Uncharacterized protein 20.6 74 0.0025 22.7 2.8 25 3-27 79-104 (161)
No 1
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=100.00 E-value=3.3e-41 Score=247.88 Aligned_cols=144 Identities=17% Similarity=0.277 Sum_probs=132.3
Q ss_pred Cc--cEEEEEEEcCCHHHHHHH-hhCCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eC
Q 031888 1 MK--KMKGQVVLNLPAEKAWEM-YRNNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ET 75 (151)
Q Consensus 1 M~--~~~~~~~i~a~a~~vW~~-~~d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~ 75 (151)
|| +++.+++|++||++||++ ++||++| |+|+|+++++|++ +|||++||||+|+|.+|++.. ++||||+++ ++
T Consensus 1 mg~~~~~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg~~Gsir~~~~~~g~~~~--~~kErl~~iD~~ 77 (154)
T 2vjg_A 1 MGAQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGGAGTVRIITLPEGSPIT--TMTVRTDAVNKE 77 (154)
T ss_dssp --CCEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSSTTCEEEEECCTTCSCC--EEEEEEEEEETT
T ss_pred CCceEEEEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCCCCceEEEEEecCCCCce--EEEEEEEEEecc
Confidence 55 789999999999999999 9999998 9999999999999 999999999999999888654 699999999 99
Q ss_pred ccEEEEEEEeCCCC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHH---HHHHHHHHHHHHHhhhhc
Q 031888 76 GRSVTYLVVDGELK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEK---ARDAALGFLKCFDKFQLS 150 (151)
Q Consensus 76 ~~~~~y~iieg~~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~---~~~~~~~~~k~ie~~l~~ 150 (151)
+|+++|+++||+++ ..|++|+++++|.|.++| ||+++|+++|++.++..++|+. +++.+.++||+||+|||+
T Consensus 78 ~~~~~y~iiegd~l~~~~~~~~~ti~v~p~~~g---gs~v~wt~~y~~~~~~~~~~~~~~~~~~~~~~~~k~ie~ylla 153 (154)
T 2vjg_A 78 ALSYDSTVIDGDILLGFIESIETHMVVVPTADG---GSITKTTAIFHTKGDAVVPEENIKFADAQNTALFKAIEAYLIA 153 (154)
T ss_dssp TTEEEEEEEESGGGTTTEEEEEEEEEEEECTTS---CEEEEEEEEEEESTTCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCccceEEEEEEEEEEECCCC---cEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999976 459999999999998775 8999999999999999888887 479999999999999997
No 2
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=100.00 E-value=1.7e-40 Score=245.19 Aligned_cols=143 Identities=13% Similarity=0.311 Sum_probs=131.7
Q ss_pred cEEEEEEEcCCHHHHHHHh-hCCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEE
Q 031888 3 KMKGQVVLNLPAEKAWEMY-RNNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSV 79 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~-~d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~ 79 (151)
+++.+++|++||++||+++ +||+++ |+|+|+++++|++++|||++|+||+|+|.+|++.. ++||||+++ +++|++
T Consensus 4 ~~~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg~Gsir~~~~~~g~~~~--~~kErl~~iD~~~~~~ 81 (159)
T 4a8u_A 4 NYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFK--YVKDRVDEVDHTNFKY 81 (159)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSSTTCEEEEECCTTSSCS--EEEEEEEEEETTTTEE
T ss_pred EEEEEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCCCceEEEEEEecCCCcc--EEEEEEEEEccccCEE
Confidence 5788999999999999998 999995 99999999999999999999999999999988643 699999999 999999
Q ss_pred EEEEEeCCCC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH---HHHHHHHHHHHHhhhhc
Q 031888 80 TYLVVDGELK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA---RDAALGFLKCFDKFQLS 150 (151)
Q Consensus 80 ~y~iieg~~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~---~~~~~~~~k~ie~~l~~ 150 (151)
+|+++||+++ ..|++|+++++|.|.++| ||+++|+++|++.++..++|+.+ ++.+.+|||+||+||++
T Consensus 82 ~y~iiegd~l~~~~~~y~~ti~v~p~~~g---gs~v~wt~~y~~~~~~~~~~~~~k~~~~~~~~~~k~ie~yll~ 153 (159)
T 4a8u_A 82 SYSVIEGGPVGDTLEKISNEIKIVATPNG---GSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLA 153 (159)
T ss_dssp EEEEEEETTCBTTEEEEEEEEEEEECTTS---CEEEEEEEEEEESSSCCC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCCCccceEEEEEEEEEEECCCC---ceEEEEEEEEEECCCCcCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999987 569999999999998875 89999999999999988888764 88999999999999997
No 3
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=100.00 E-value=3.9e-40 Score=244.65 Aligned_cols=144 Identities=13% Similarity=0.230 Sum_probs=132.2
Q ss_pred Cc--cEEEEEEEcCCHHHHHHH-hhCCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eC
Q 031888 1 MK--KMKGQVVLNLPAEKAWEM-YRNNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ET 75 (151)
Q Consensus 1 M~--~~~~~~~i~a~a~~vW~~-~~d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~ 75 (151)
|+ +++.+++|++||++||++ ++||++| |+|+|+++++|++++|||++||||+|+|.+|++.. ++||||+++ ++
T Consensus 7 Mg~~~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg~~Gsir~~~~~~g~~~~--~~kErl~~iD~~ 84 (165)
T 3ie5_A 7 MAAYTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFVDGHPLT--YMLHKFDEIDAA 84 (165)
T ss_dssp CSCEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECTTSSCC--EEEEEEEEEEGG
T ss_pred eeeEEEEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCCCCCCeEEEEEecCCCCCc--eEEEEEEEEchh
Confidence 55 688999999999999999 5899998 99999999999999999999999999999988644 699999999 99
Q ss_pred ccEEEEEEEeCCCC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH---HHHHHHHHHHHHhhhhc
Q 031888 76 GRSVTYLVVDGELK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA---RDAALGFLKCFDKFQLS 150 (151)
Q Consensus 76 ~~~~~y~iieg~~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~---~~~~~~~~k~ie~~l~~ 150 (151)
+|+++|+++||+++ ..|++|+++++|. .++| ||+++|+++|++.++..++|+.+ ++.+.++||+||+||++
T Consensus 85 ~~~~~Y~iieG~~l~~~~~~y~~~i~v~-~~~g---gs~vkwt~~y~~~~~~~~~~e~~k~~~~~~~~~~K~ie~ylla 159 (165)
T 3ie5_A 85 NFYCKYTLFEGDVLRDNIEKVVYEVKLE-AVGG---GSKGKITVTYHPKPGCTVNEEEVKIGEKKAYEFYKQVEEYLAA 159 (165)
T ss_dssp GTEEEEEEEEEGGGTTTEEEEEEEEEEE-EETT---EEEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEEecCCCCccceEEEEEEEEEE-eCCC---ceEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999976 4699999999999 4454 89999999999999998888875 79999999999999997
No 4
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=100.00 E-value=6.4e-40 Score=241.11 Aligned_cols=144 Identities=17% Similarity=0.364 Sum_probs=126.1
Q ss_pred Cc-cEEEEEEEcCCHHHHHHH-hhCCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCC-CcceeeeEEEEEEEE-eC
Q 031888 1 MK-KMKGQVVLNLPAEKAWEM-YRNNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPA-VHSYVKESIEKIEGV-ET 75 (151)
Q Consensus 1 M~-~~~~~~~i~a~a~~vW~~-~~d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g-~~~~~~~~kErl~~~-~~ 75 (151)
|+ +++.+++|+|||++||++ ++||+++ |+|+|+++++|++++|||++||||+|+|.+| .+ . ++||||+++ ++
T Consensus 1 M~~~~~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~g~~~-~--~~kErl~~iD~~ 77 (155)
T 2flh_A 1 MVKEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFLPEVSP-S--YQREEITEFDES 77 (155)
T ss_dssp CCEEEEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSSTTCEEEEEECTTSSS-C--EEEEEEEEEETT
T ss_pred CCcEEEEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCCCCeEEEEEeeCCCCC-c--EEEEEEEEEeCC
Confidence 55 788999999999999999 7999998 9999999999999999999999999999988 44 2 699999999 99
Q ss_pred ccEEEEEEEeCCCC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHH--HHHHHHHHHHHhhhhc
Q 031888 76 GRSVTYLVVDGELK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKAR--DAALGFLKCFDKFQLS 150 (151)
Q Consensus 76 ~~~~~y~iieg~~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~--~~~~~~~k~ie~~l~~ 150 (151)
+|+++|+++||+++ .+|++|+++++|.|.++| ||+++|+++|++.++..+++..++ +.+.++||+||+||++
T Consensus 78 ~~~~~y~iieg~~l~~~~~~~~~~i~v~p~~~g---gs~v~wt~~y~~~~~~~~~~~~~~~~~~~~~~~k~ie~yll~ 152 (155)
T 2flh_A 78 SHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEED---KTLVNVKISYDHDSDIEEKVTPTKTSQSTLMYLRRLERYLSN 152 (155)
T ss_dssp TTEEEEEEEEEGGGGTTCSEEEEEEEEEEEETT---EEEEEEEEEEEC-------CCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCEEEEEEEeccccccCceEEEEEEEEEECCCC---CEEEEEEEEEEECCCCccChhHhhhHHHHHHHHHHHHHHHhh
Confidence 99999999999975 459999999999999875 899999999999998877777888 9999999999999987
No 5
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=100.00 E-value=9.9e-40 Score=240.03 Aligned_cols=145 Identities=17% Similarity=0.272 Sum_probs=130.1
Q ss_pred Cc--cEEEEEEEcCCHHHHHHHh-hCCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eC
Q 031888 1 MK--KMKGQVVLNLPAEKAWEMY-RNNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ET 75 (151)
Q Consensus 1 M~--~~~~~~~i~a~a~~vW~~~-~d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~ 75 (151)
|| +++.++++++||+++|+++ .|+++| |+|+|++++|++ ++|||++|+||+|+|..|++.. +++|||+++ ++
T Consensus 1 mgv~~~~~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~-veGdg~~Gsir~~t~~~g~~~~--~~kErle~iD~~ 77 (154)
T 2wql_A 1 MGAQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVE-VKGDGGAGTVRIITLPEGSPIT--TMTVRTDAVNKE 77 (154)
T ss_dssp --CCEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEE-EESSSSTTCEEEEECCTTCSCC--EEEEEEEEEETT
T ss_pred CCCeEEEEEEEecCCHHHHHHHHhhcccccchhhcccceeEEE-EECCCCCCeEEEEEEcCCCCce--EEEEEEEEEehh
Confidence 55 7888999999999999875 799987 999999999998 5899999999999999888755 699999999 99
Q ss_pred ccEEEEEEEeCCCC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHH---HHHHHHHHHHhhhhcC
Q 031888 76 GRSVTYLVVDGELK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARD---AALGFLKCFDKFQLSY 151 (151)
Q Consensus 76 ~~~~~y~iieg~~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~---~~~~~~k~ie~~l~~~ 151 (151)
+|+++|+++||+.+ ..|++|+++++|.|.++| ||+++|++.|++.++..++|+.+++ .+.++||+||+|||+.
T Consensus 78 ~~~~~y~iieGd~l~~~~~~~~~~ikv~p~~~g---gsvvk~t~~Y~~~~~~~~~ee~~~~~~~~~~~~~KaiEayLlan 154 (154)
T 2wql_A 78 ALSYDSTVIDGDILLGFIESIETHMVVVPTADG---GSITKTTAIFHTKGDAVVPEENIKFADAQNTALFKAIEAYLIAN 154 (154)
T ss_dssp TTEEEEEEEESGGGTTTEEEEEEEEEEEECTTS---CEEEEEEEEEEESTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCEEEEEEEeccccccceEEEEEEEEEeeCCCC---cEEEEEEEEEEECCCCCCCHHHHHHHHHHHHhHHHHHHHHHhcC
Confidence 99999999999975 569999999999999886 9999999999999999988887644 4789999999999973
No 6
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=100.00 E-value=1.4e-39 Score=242.33 Aligned_cols=143 Identities=22% Similarity=0.349 Sum_probs=128.9
Q ss_pred Cc--cEEEEEEEcCCHHHHHHHh-hCCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eC
Q 031888 1 MK--KMKGQVVLNLPAEKAWEMY-RNNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ET 75 (151)
Q Consensus 1 M~--~~~~~~~i~a~a~~vW~~~-~d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~ 75 (151)
|| +++.+++|+|||++||+++ +||+++ |+|+|+++++|++++|||++||||+|+|. |. .. ++||||+++ ++
T Consensus 6 mg~~~~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdgg~Gsir~~t~~-g~-~~--~~kErl~~iD~~ 81 (168)
T 3rws_A 6 MGVITSESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGGPGTIKKLTFV-GD-FG--STKQHIDMVDRE 81 (168)
T ss_dssp CCEEEEEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSSSTTCEEEEEES-SS-SC--EEEEEEEEEETT
T ss_pred cceEEEEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCCCCCeEEEEEEc-CC-Ce--EEEEEEEEEccc
Confidence 66 6788999999999999996 999995 99999999999999999999999999998 42 22 699999999 99
Q ss_pred ccEEEEEEEeCCCCC--ceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCC-CCCChHH---HHHHHHHHHHHHHhhhh
Q 031888 76 GRSVTYLVVDGELKG--MYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTT-STPAPEK---ARDAALGFLKCFDKFQL 149 (151)
Q Consensus 76 ~~~~~y~iieg~~~~--~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~-~~~~~~~---~~~~~~~~~k~ie~~l~ 149 (151)
+|+++|+++||+++. +|++|+++++|.|.++| ||+++|+++|++.++ ..++|+. +++.+.++||+||+||+
T Consensus 82 ~~~~sY~iiegd~l~~~p~~~y~~ti~v~p~~~g---gs~v~wt~~y~~~~~d~~~~~e~~k~~~~~~~~~~k~ie~yll 158 (168)
T 3rws_A 82 NCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEE---GCIVKSTTKYYTKGDDIELSKDYLEAGIERFEGFTKAVESFLL 158 (168)
T ss_dssp TTEEEEEECSSCCBTTBCEEEEEEEEEEEECTTS---CEEEEEEEEEEECSSSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEccCcccCcCceEEEEEEEEEECCCC---ceEEEEEEEEEECCCccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999863 39999999999998875 899999999999998 5566765 68899999999999999
Q ss_pred c
Q 031888 150 S 150 (151)
Q Consensus 150 ~ 150 (151)
+
T Consensus 159 a 159 (168)
T 3rws_A 159 A 159 (168)
T ss_dssp H
T ss_pred h
Confidence 7
No 7
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=100.00 E-value=1.8e-39 Score=241.14 Aligned_cols=147 Identities=24% Similarity=0.403 Sum_probs=135.0
Q ss_pred CccEEEEEEEcCCHHHHHHHhh-CCCcccccCccccceEEEEcCC-CCCCeEEEEEecCCCcceeeeEEEEEEEE-eCcc
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYR-NNEIISKINPEMLAHAEYIQGD-GSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGR 77 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~-d~~~l~~~~P~~v~s~~~~eGd-g~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~ 77 (151)
|++++.+++|+|||++||+++. ||..+|+|+|+.+++|++++|| |++|+||.|++.+|++.. ++||||+++ ++++
T Consensus 16 ~~k~~~ev~i~apa~kvw~~~~~d~~~lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~~gg~~~--~~kErl~~iD~~~~ 93 (166)
T 2i9y_A 16 VGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAK--VAKERIEAVEPDKN 93 (166)
T ss_dssp EEEEEEEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEETTEEE--EEEEEEEEEETTTT
T ss_pred ccEEEEEEEecCCHHHHHHHHhcccccccccccccceEEEEEcCCCCCCCeEEEEEEecCCCce--EEEEEEEEEeccCc
Confidence 4689999999999999999965 8888999999889999999999 899999999999887654 599999999 9999
Q ss_pred EEEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhhcC
Q 031888 78 SVTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQLSY 151 (151)
Q Consensus 78 ~~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~~~ 151 (151)
+++|+++||+++..|++|.++++|.|.++| +||+|+|+++|++.+++.++|+.+++++.+++|+||+||++.
T Consensus 94 ~~~y~iieGd~~~~~~~~~~ti~v~p~~~g--~gs~v~wt~~ye~~~~~~~~p~~~~~~~~~~~k~ie~~l~~~ 165 (166)
T 2i9y_A 94 LITFRVIEGDLMKEYKSFLLTIQVTPKPGG--PGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEHLLAE 165 (166)
T ss_dssp EEEEEECCTTGGGTEEEEEEEEEEEEEEET--TEEEEEEEEEEEESSTTTCCTHHHHHHHHHHHHHHHHHHHSC
T ss_pred EEEEEEEeCCCCCCeeEEEEEEEEEECCCC--CCcEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999986669999999999998654 489999999999999999999999999999999999999973
No 8
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=100.00 E-value=1.2e-38 Score=235.04 Aligned_cols=144 Identities=15% Similarity=0.349 Sum_probs=132.5
Q ss_pred ccEEEEEEEcCCHHHHHHHhh-CCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccE
Q 031888 2 KKMKGQVVLNLPAEKAWEMYR-NNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRS 78 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~~~-d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~ 78 (151)
++++.+++|++||++||++++ ||+++ |+|+|+++++|++++|||++||||+|++.+|.+.. +++|||+.+ +++|+
T Consensus 3 ~~~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~G~~~~--~~kErl~~~D~~~~~ 80 (159)
T 1e09_A 3 FTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYG--YVKHKIDSIDKENYS 80 (159)
T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECCSSSCE--EEEEEEEEEETTTTE
T ss_pred EEEEEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCCCCceEEEEEecCCCCce--EEEEEEEEEcCCCCE
Confidence 478899999999999999999 99875 99999889999999999999999999999775433 699999999 99999
Q ss_pred EEEEEEeCCCCC-ceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH---HHHHHHHHHHHHhhhhc
Q 031888 79 VTYLVVDGELKG-MYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA---RDAALGFLKCFDKFQLS 150 (151)
Q Consensus 79 ~~y~iieg~~~~-~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~---~~~~~~~~k~ie~~l~~ 150 (151)
++|+++||+++. +|++|+++++|.|.++| ||+++|+++|++.++..++|+.+ ++.+.+++|+||+||++
T Consensus 81 ~~y~iieG~~~~~~~~~~~~~~~v~~~~~~---gs~v~wt~~y~~~~~~~~~~~~~~~~~~~~~~~~k~ie~yll~ 153 (159)
T 1e09_A 81 YSYTLIEGDALGDTLEKISYETKLVASPSG---GSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKG 153 (159)
T ss_dssp EEEEECCCTTTGGGEEEEEEEEEECCCTTS---SEEEEEEEEEEECSSCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecccCcccceEEEEEEEEEecCCC---CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999864 69999999999998775 89999999999999999899877 89999999999999986
No 9
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=100.00 E-value=1e-37 Score=229.62 Aligned_cols=143 Identities=14% Similarity=0.259 Sum_probs=131.4
Q ss_pred ccEEEEEEEcCCHHHHHHHhh-CCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccE
Q 031888 2 KKMKGQVVLNLPAEKAWEMYR-NNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRS 78 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~~~-d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~ 78 (151)
++++.+++|++||++||++++ ||+++ |+|+| .+++|++++|||++|+||+|++.+|.+.. +++|||+++ +++|+
T Consensus 3 ~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~-~i~s~~i~eG~g~~Gsir~~~~~~G~~~~--~~kErl~~~D~~~~~ 79 (157)
T 1tw0_A 3 FVFRDETSSSVAPAKLYKALTKDSDTIAQKIDG-PIQSIELVEGNGGVGTIKKITANEGDKTS--FVLQKVDAIDEANLG 79 (157)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHTGGGGGGGSCS-SEEEEEEEESSSSTTCEEEEEEEETTEEE--EEEEEEEEEETTTTE
T ss_pred EEEEEEEEecCCHHHHHHHHhcCcchhhhhHHh-hccEEEEEeCCCCCCeEEEEEeeCCCccc--eEEEEEEEEeccCCE
Confidence 478899999999999999999 99975 99995 79999999999999999999999876533 699999999 99999
Q ss_pred EEEEEEeCCCCC-ceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH---HHHHHHHHHHHHhhhhc
Q 031888 79 VTYLVVDGELKG-MYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA---RDAALGFLKCFDKFQLS 150 (151)
Q Consensus 79 ~~y~iieg~~~~-~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~---~~~~~~~~k~ie~~l~~ 150 (151)
++|+++||+++. .|++|+++++|.|.+++ ||+++|+++|++.++..++|+.+ ++.+.+|+|+||+||++
T Consensus 80 ~~y~iieGd~~~~~~~~~~~~~~v~~~~~~---gs~v~w~~~y~~~~~~~~~~~~~~~~~~~~~~~~k~ie~yll~ 152 (157)
T 1tw0_A 80 YDYSIVGGTGLPESLEKLSFETKVVAGSGG---GSISKVTLKFHTKGDAPLSDAVRDDALAKGAGFFKAIEGYVLA 152 (157)
T ss_dssp EEEEEEECTTSCTTEEEEEEEEEEEECSSS---SEEEEEEEEEEESTTCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCccceEEEEEEEEEEecCCC---CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999764 69999999999998775 89999999999999999889887 89999999999999987
No 10
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=100.00 E-value=4.7e-38 Score=231.59 Aligned_cols=144 Identities=17% Similarity=0.282 Sum_probs=131.6
Q ss_pred Cc--cEEEEEEEcCCHHHHHHHhh-CCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eC
Q 031888 1 MK--KMKGQVVLNLPAEKAWEMYR-NNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ET 75 (151)
Q Consensus 1 M~--~~~~~~~i~a~a~~vW~~~~-d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~ 75 (151)
|+ +++.+++|++||++||++++ ||+++ |+|+| .+++|++++|||++||||+|++.+|.+.. +++|||+++ ++
T Consensus 1 M~~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~-~i~s~~i~eGdgg~Gsir~~~~~~g~~~~--~~kErl~~~D~~ 77 (158)
T 2qim_A 1 MGVFTFQDEYTSTIAPAKLYKALVTDADIIIPKAVE-TIQSVEIVEGNGGPGTIKKLTFIEGGESK--YVLHKIEAIDEA 77 (158)
T ss_dssp -CEEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCT-TEEEEEEEESSSSTTCEEEEEEEETTEEE--EEEEEEEEEEGG
T ss_pred CCCEEEEEEEEecCCHHHHHHHHhcCccchhhhHHh-hCcEEEEEecCCCCCeEEEEEEcCCCcce--eEEEEEEEEecC
Confidence 66 78899999999999999999 99976 99995 79999999999999999999999876533 699999999 99
Q ss_pred ccEEEEEEEeCCCCC-ceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH---HHHHHHHHHHHHhhhhc
Q 031888 76 GRSVTYLVVDGELKG-MYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA---RDAALGFLKCFDKFQLS 150 (151)
Q Consensus 76 ~~~~~y~iieg~~~~-~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~---~~~~~~~~k~ie~~l~~ 150 (151)
+|+++|+++||+++. .|++|.++++|.|.++| ||+++|+++|++.++..++|+.+ ++.+.+++|+||+||++
T Consensus 78 ~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~---gs~v~wt~~y~~~~~~~~~~~~~~~~~~~~~~~~k~ie~yll~ 153 (158)
T 2qim_A 78 NLGYNYSIVGGVGLPDTIEKISFETKLVEGANG---GSIGKVTIKIETKGDAQPNEEEGKAAKARGDAFFKAIESYLSA 153 (158)
T ss_dssp GTEEEEEEEEESSCCCSEEEEEEEEEEEECSTT---CEEEEEEEEEEESTTCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeccCCccceEEEEEEEEEEecCCC---CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999764 69999999999998775 89999999999999999889887 89999999999999987
No 11
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=100.00 E-value=1.9e-37 Score=227.67 Aligned_cols=142 Identities=15% Similarity=0.260 Sum_probs=130.1
Q ss_pred ccEEEEEEEcCCHHHHHHHhh-CCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccE
Q 031888 2 KKMKGQVVLNLPAEKAWEMYR-NNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRS 78 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~~~-d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~ 78 (151)
++++.+++|++||++||++++ ||+++ |+|+| .+++|++++|||++|+||+|++.+|.+.. +++|||+++ +++|+
T Consensus 3 ~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~-~i~s~~i~eG~g~~Gsir~~~~~~G~~~~--~~kErl~~~D~~~~~ 79 (155)
T 1icx_A 3 FAFENEQSSTVAPAKLYKALTKDSDEIVPKVIE-PIQSVEIVEGNGGPGTIKKIIAIHDGHTS--FVLHKLDAIDEANLT 79 (155)
T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHHHST-TEEEEEEEESSSSTTCEEEEEEESSSSEE--EEEEEEEEEEGGGTE
T ss_pred EEEEEEEEecCCHHHHHHHHhcCcchhcchhhh-hccEEEEEecCCCCCeEEEEEEecCCcce--eEEEEEEEEeccCCE
Confidence 478899999999999999999 99975 99995 79999999999999999999999876533 699999999 99999
Q ss_pred EEEEEEeCCCCC-ceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH---HHHHHHHHHHHHhhhhc
Q 031888 79 VTYLVVDGELKG-MYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA---RDAALGFLKCFDKFQLS 150 (151)
Q Consensus 79 ~~y~iieg~~~~-~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~---~~~~~~~~k~ie~~l~~ 150 (151)
++|+++||+++. .|++|+++++|.|.+++ ||+++|+++|++.++. ++|+.+ ++.+.+++|+||+||++
T Consensus 80 ~~y~iieGd~~~~~~~~~~~~~~v~~~~~~---gs~v~w~~~y~~~~~~-~~~~~~~~~~~~~~~~~k~ie~yll~ 151 (155)
T 1icx_A 80 YNYSIIGGEGLDESLEKISYESKILPGPDG---GSIGKINVKFHTKGDV-LSETVRDQAKFKGLGLFKAIEGYVLA 151 (155)
T ss_dssp EEEEEEEETTSCTTEEEEEEEEEEEECGGG---CEEEEEEEEEEESSSS-CCHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCccceEEEEEEEEEEecCCC---CEEEEEEEEEEECCCC-CCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999764 69999999999998765 8999999999999998 888877 89999999999999987
No 12
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=100.00 E-value=1e-37 Score=237.88 Aligned_cols=143 Identities=17% Similarity=0.223 Sum_probs=129.1
Q ss_pred ccEEEEEEEcCCHHHHHHH-hh-CCCcc-cccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCcc
Q 031888 2 KKMKGQVVLNLPAEKAWEM-YR-NNEII-SKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGR 77 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~-~~-d~~~l-~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~ 77 (151)
++++.+++|+|||++||++ ++ ||+++ |+|+|++++||+++ |||++||||.|+|.+|++.. ++||||+++ +++|
T Consensus 29 g~~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg~GsIR~lt~~~G~~~~--~vkErle~iDde~~ 105 (201)
T 2vq5_A 29 KVIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGGVGTILDMTFVPGEFPH--EYKEKFILVDNEHR 105 (201)
T ss_dssp EEEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSSTTCEEEEECCTTCSSC--EEEEEEEEEETTTT
T ss_pred eEEEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCCCCeEEEEEecCCCccc--EEEEEEEEEchhhC
Confidence 4788999999999999999 47 99998 99999999999999 99999999999999886543 699999999 9999
Q ss_pred EEEEEEEeCCCC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCC--CChHHHHHHHHHHHHHHHhhhhc
Q 031888 78 SVTYLVVDGELK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTST--PAPEKARDAALGFLKCFDKFQLS 150 (151)
Q Consensus 78 ~~~y~iieg~~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~k~ie~~l~~ 150 (151)
+++|+++||+++ .+|++|+++++|.|.++| ||+++|+++|++.++.+ +++..+++.+.+++|+||+||++
T Consensus 106 ~~sYsiieGd~l~~~~~~y~~tikv~p~~dg---gs~vkWt~~ye~~~~~~~~~e~~~~~~~~~~~~KaiE~yLla 178 (201)
T 2vq5_A 106 LKKVQMIEGGYLDLGVTYYMDTIHVVPTGKD---SCVIKSSTEYHVKPEFVKIVEPLITTGPLAAMADAISKLVLE 178 (201)
T ss_dssp EEEEEEEEEGGGGTTEEEEEEEEEEEEEETT---EEEEEEEEEEEECGGGHHHHTTTCCSHHHHHHHHHHHHHHHS
T ss_pred EEEEEEEecCccccceeEEEEEEEEEECCCC---CeEEEEEEEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999976 569999999999999875 89999999999998873 34446689999999999999987
No 13
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=99.97 E-value=6.3e-30 Score=192.46 Aligned_cols=116 Identities=18% Similarity=0.232 Sum_probs=102.4
Q ss_pred EEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcC-CCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEEEE
Q 031888 4 MKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQG-DGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSVTY 81 (151)
Q Consensus 4 ~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eG-dg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~~y 81 (151)
.....+|+|||++||++++||+++++|+| .|++| .++| ++++|+||.+++.+|.+.. +++|||+++ +++|+++|
T Consensus 29 ~~v~~~I~Apa~~VW~~v~df~~l~~w~P-~V~s~-~~eG~~ggvGsvR~lt~~~G~p~~--~vkErL~~~D~~~~~~sY 104 (183)
T 3rt2_A 29 STLVKHIKAPLHLVWSIVRRFDEPQKYKP-FISRC-VVQGKKLEVGSVREVDLKSGLPAT--KSTEVLEILDDNEHILGI 104 (183)
T ss_dssp EEEEEEESSCHHHHHHHHTCTTCGGGTCT-TEEEE-EESSSCCCTTCEEEEEECCSSTTC--EEEEEEEEEETTTTEEEE
T ss_pred EEEEEEEeCCHHHHHHHHhCcCchhhcCc-cceEE-EeeCCCCCCCcEEEEEeCCCCccc--eEEEEEEEEECCCCEEEE
Confidence 34556899999999999999999999999 58999 6789 7899999999999885443 599999999 89999999
Q ss_pred EEEeCCCCCceeeEEEEEEEEecC-CCCCC-ccEEEEEEEEEeCCCCC
Q 031888 82 LVVDGELKGMYDPYRVTFSFTPVE-GKQDE-MCIAEWAAEFEPLTTST 127 (151)
Q Consensus 82 ~iieg~~~~~~~~y~~t~~v~p~~-~g~~~-~s~v~W~~~~~~~~~~~ 127 (151)
++++|+++ |++|.++++|.|.+ +| + +|+|+|+++|++..+..
T Consensus 105 ~Iieg~lp--~~~y~ati~v~p~~~dG--~~gt~V~Ws~~fd~~~g~~ 148 (183)
T 3rt2_A 105 RIVGGDHR--LKNYSSTISLHSETIDG--KTGTLAIESFVVDVPEGNT 148 (183)
T ss_dssp EEEEESCS--CTTCEEEEEEEEEEETT--EEEEEEEEEEEEECCTTCC
T ss_pred EEecCCcc--eeEEEEEEEEEEecCCC--CCCEEEEEEEEEEcCCCCC
Confidence 99999877 99999999999987 65 3 69999999999876654
No 14
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=99.97 E-value=8.9e-30 Score=194.81 Aligned_cols=111 Identities=14% Similarity=0.206 Sum_probs=96.3
Q ss_pred EEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCC-CCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEEEEE
Q 031888 5 KGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGD-GSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSVTYL 82 (151)
Q Consensus 5 ~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGd-g~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~~y~ 82 (151)
....+|+|||++||++++||+++++|+| +|++|++++|+ +++|+||.|+|.+|.+.. +++|||+++ +++|+|+|+
T Consensus 57 ~v~~~I~ApadkVW~lv~Df~~l~~w~p-~V~s~e~~eGd~g~vGsVR~lt~~~G~p~~--~vkErL~~lDde~~~~sYs 133 (208)
T 3jrs_A 57 LLAQRIHAPPETVWSVVRRFDRPQIYKH-FIKSCNVSEDFEMRVGCTRDVNVISGLPAN--TSRERLDLLDDDRRVTGFS 133 (208)
T ss_dssp EEEEEESSCHHHHHHHHTCTTCGGGTCT-TEEEEECCTTCCCSTTCEEEEEECTTSSCC--EEEEEEEEEETTTTEEEEE
T ss_pred EEEEEEeCCHHHHHHHHhCcCChhHccc-cceEEEEecCCCCCCCeEEEEEecCCCccc--eEEEEEEEEeccCCEEEEE
Confidence 4556899999999999999999999999 59999999997 599999999999886544 599999999 999999999
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEe
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEP 122 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~ 122 (151)
|++|+++ +++|+++++|.|.+++ ++|.|+|+++|+.
T Consensus 134 IieG~lp--v~~Y~sti~V~p~~~g--~~t~V~Wt~~fes 169 (208)
T 3jrs_A 134 ITGGEHR--LRNYKSVTTVHRFEKE--EEEERIWTVVLES 169 (208)
T ss_dssp EEESSSS--CTTCEEEEEEEEEEC-------CEEEEEEEE
T ss_pred EeeCCcc--eeeEEEEEEEEEccCC--CccEEEEEEEEEE
Confidence 9999977 8999999999997544 4899999999994
No 15
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=99.97 E-value=9e-29 Score=179.59 Aligned_cols=130 Identities=18% Similarity=0.324 Sum_probs=107.4
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEE
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSV 79 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~ 79 (151)
|++++.+++|+|||++||++++||+++|+|+|. +++|++++| |++|++++.+|+ .++|||+++ ++++++
T Consensus 1 M~~v~~si~I~Ap~~~VW~~l~d~~~~~~w~p~-v~~~~~~~G----G~vR~~~~~~G~-----~~~Erl~~~D~~~~~~ 70 (146)
T 3f08_A 1 MAHTTTSMEIFGSTEQVWQLIGGFNSLPDWLPY-IPSSKLTEG----GRVRHLANPDGE-----TIIERLEVFNDKERYY 70 (146)
T ss_dssp -CEEEEEEEESSCHHHHHHHHCSTTCHHHHCTT-CCEEEEEGG----GTEEEEECTTSC-----EEEEEEEEEETTTTEE
T ss_pred CCEEEEEEEEeCCHHHHHHHHhccccHHHhCCC-eEEEEEeCC----CeEEEEEeCCCC-----EEEEEEEEEeCCCCEE
Confidence 899999999999999999999999999999995 899999875 899999998775 499999999 789999
Q ss_pred EEEEEeCCCCCceeeEEEEEEEEe-cCCCCCCccEEEEEEEEEeCCCCCCChHHH----HHHHHHHHHHHHhhh
Q 031888 80 TYLVVDGELKGMYDPYRVTFSFTP-VEGKQDEMCIAEWAAEFEPLTTSTPAPEKA----RDAALGFLKCFDKFQ 148 (151)
Q Consensus 80 ~y~iieg~~~~~~~~y~~t~~v~p-~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~----~~~~~~~~k~ie~~l 148 (151)
+|++++|+++ +++|.++++|.| .+++ ||+|+|+++|+|.+. ..+.. ...+...+++|.+++
T Consensus 71 ~y~iv~g~~~--~~~~~~~~~v~p~~~~~---gt~v~w~~~~~p~g~---~~~~~~~~~~~~~~~~L~~Lk~~~ 136 (146)
T 3f08_A 71 TYSIMNAPFP--VTNYLSTIQVKEGTESN---TSLVEWSGTFTPVAV---SDEEAINLVHGIYSDGLKALQHAF 136 (146)
T ss_dssp EEEEEECSSS--EEEEEEEEEEEECSSTT---CEEEEEEEEEEESSS---CHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCCc--eeEEEEEEEEEEecCCC---cEEEEEEEEEEeCCC---CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876 999999999999 4454 899999999998332 22222 334455555555544
No 16
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=99.97 E-value=7.7e-29 Score=189.17 Aligned_cols=119 Identities=15% Similarity=0.240 Sum_probs=105.2
Q ss_pred ccEEEEE--EEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccE
Q 031888 2 KKMKGQV--VLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRS 78 (151)
Q Consensus 2 ~~~~~~~--~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~ 78 (151)
++++.++ +|+|||++||++++||+++++|+| +|++|++ +|++++|+||.+++.+|.+.. +++|||+++ +++|+
T Consensus 50 ~k~~~~V~~~I~ApadkVW~lV~Df~~l~kW~P-~V~s~ev-eGdg~vGsVR~vt~~~G~p~~--~vkErL~~lDde~~~ 125 (205)
T 3oqu_A 50 NQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKP-FVSRCTV-IGDPEIGSLREVNVKSGLPAT--TSTERLELLDDEEHI 125 (205)
T ss_dssp TEEEEEEEEEESSCHHHHHHHHTCTTCGGGTCT-TEEEEEC-CSSCCTTCEEEEEECTTSSCS--EEEEEEEEEETTTTE
T ss_pred cEEEEEEeeEEcCCHHHHHHHHhCcCChhHcCc-cceEEEe-eCCCCCCcEEEEEEcCCCccc--eEEEEEEEEECCCCE
Confidence 3678888 999999999999999999999999 6999975 898899999999998886543 599999999 99999
Q ss_pred EEEEEEeCCCCCceeeEEEEEEEEecCC-CCCCccEEEEEEEEEeCCCCC
Q 031888 79 VTYLVVDGELKGMYDPYRVTFSFTPVEG-KQDEMCIAEWAAEFEPLTTST 127 (151)
Q Consensus 79 ~~y~iieg~~~~~~~~y~~t~~v~p~~~-g~~~~s~v~W~~~~~~~~~~~ 127 (151)
|+|++++|+++ |++|.++++|.|.++ | ..+|++.|+..+++..++.
T Consensus 126 ~sYsIieG~lp--v~~Y~ati~V~p~~~dG-~~~T~v~ws~~~D~p~g~t 172 (205)
T 3oqu_A 126 LGIKIIGGDHR--LKNYSSILTVHPEIIEG-RAGTMVIESFVVDVPQGNT 172 (205)
T ss_dssp EEEEEEEESSS--CTTCEEEEEEEEECCCC--CEEEEEEEEEEECCTTCC
T ss_pred EEEEEEecCcc--eeEEEEEEEEEEccCCC-CceEEEEEEEeccCCCCCC
Confidence 99999999977 999999999999884 3 1279999999999877764
No 17
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=99.96 E-value=4.5e-28 Score=178.71 Aligned_cols=134 Identities=22% Similarity=0.351 Sum_probs=109.1
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCC--CCCeEEEEEecCCCcceeeeEEEEEEEE-eCcc
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDG--SPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGR 77 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg--~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~ 77 (151)
|++++.+++|+|||++||++++||+++ +|+|.++++|++++|++ ++|+||.+ |+ .++|||+++ ++++
T Consensus 1 M~~v~~si~I~Ap~~~VW~~v~Df~~~-~w~P~v~~s~e~~eg~~~~~vGsvR~~----gg-----~v~Erl~~~D~~~~ 70 (160)
T 3p51_A 1 MPKVYNSIVVDAPVERVWSRIRNFHDF-SWAPSLIKSCKKVGGGGGYSVGARRLL----NG-----EFLDTLIAYSEIER 70 (160)
T ss_dssp -CEEEEEEEESSCHHHHHHHHCCTTCC-TTCTTTCCCEEEESSCCTTCTTCEEEE----TT-----TEEEEEEEEETTTT
T ss_pred CCEEEEEEEECCCHHHHHHHHhCcCCC-eEccCceEEEEEEecCCCCCCCCEEEE----CC-----EEEEEEEEEcCCCc
Confidence 999999999999999999999999999 99998777779998874 89999998 33 389999999 8899
Q ss_pred EEEEEEEeCCCCC---ceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhh
Q 031888 78 SVTYLVVDGELKG---MYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQ 148 (151)
Q Consensus 78 ~~~y~iieg~~~~---~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l 148 (151)
+++|++++|+++. .+++|.++++|.|.+++ +||+|+|+++|++.++. -.......+...++.|.+.+
T Consensus 71 ~~sY~ii~g~l~~~~~~~~~y~~~~~v~p~~~~--ggt~V~w~~~~~~~~~~--~~~~~~~~~~~~L~~Lk~~~ 140 (160)
T 3p51_A 71 RIMYSMDEGPSPVSSGEIYNYVGNLHLLPVTID--DTTFVEWSGSWESASTE--AVEYMNTVYRSLLADLAAEF 140 (160)
T ss_dssp EEEEEEEECSTTSSTTTEEEEEEEEEEEEETTT--TEEEEEEEEEEEESCSH--HHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEEecCCCcccccceeEEEEEEEEEEecCC--CCEEEEEEEEEEeCHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 9999999998653 29999999999998732 39999999999997531 11122445566666665554
No 18
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=99.96 E-value=4.5e-28 Score=183.34 Aligned_cols=115 Identities=20% Similarity=0.279 Sum_probs=97.6
Q ss_pred EEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEEEEEE
Q 031888 5 KGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSVTYLV 83 (151)
Q Consensus 5 ~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~~y~i 83 (151)
....+|+|||++||++++||+++..|.| +|++|++++|||++|+||+|+|.+|.+.. +++|||+++ +++|+|+|++
T Consensus 38 ~~~~~I~Apa~~vW~lv~df~~~~~w~p-~I~s~e~~eGdg~vGsVR~~t~~~G~p~~--~vkErL~~iD~~~~~~sY~i 114 (190)
T 3kl1_A 38 LITQRIHAPASVVWPLIRRFDNPERYKH-FVKRCRLISGDGDVGSVREVTVISGLPAS--TSTERLEFVDDDHRVLSFRV 114 (190)
T ss_dssp EEEEEESSCHHHHHHHHHCTTCGGGTCS-SEEEEEEEESSSSTTCEEEEEECSSSSCE--EEEEEEEEEETTTTEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhCCCChhHccc-ccCEEEEEcCCCCCCeEEEEEecCCCccc--eEEEEEEEEeccCCEEEEEE
Confidence 4455899999999999999999656666 69999999999999999999999887644 699999999 9999999999
Q ss_pred EeCCCCCceeeEEEEEEEEec-----CCCCCCccEEEEEEEEEeCCCCC
Q 031888 84 VDGELKGMYDPYRVTFSFTPV-----EGKQDEMCIAEWAAEFEPLTTST 127 (151)
Q Consensus 84 ieg~~~~~~~~y~~t~~v~p~-----~~g~~~~s~v~W~~~~~~~~~~~ 127 (151)
++|+++ +++|.+++++.|. ++ ++|+|+|+++|+|..+.+
T Consensus 115 ieG~~~--~~~Y~s~~~v~~~~~~~~~~---~gt~V~Ws~~f~~p~g~~ 158 (190)
T 3kl1_A 115 VGGEHR--LKNYKSVTSVNEFLNQDSGK---VYTVVLESYTVDIPEGNT 158 (190)
T ss_dssp EEESSS--CCSCEEEEEEEEEEC-CCCC---EEEEEEEEEEEECCTTCC
T ss_pred EecCCc--cccEEEEEEEEecccccCCC---CcEEEEEEEEEEcCCCCC
Confidence 999986 6777777777763 34 489999999999765543
No 19
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=99.96 E-value=2.3e-28 Score=187.24 Aligned_cols=108 Identities=15% Similarity=0.244 Sum_probs=97.9
Q ss_pred EEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCC-CCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEEEEE
Q 031888 5 KGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDG-SPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSVTYL 82 (151)
Q Consensus 5 ~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg-~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~~y~ 82 (151)
....+|+|||++||++++||+++++|+| +|++|++++|++ ++|+||.+++.+|.+.. +++|||+++ +++|+|+|+
T Consensus 53 ~v~~~I~ApadkVW~lv~dF~~l~~w~p-~V~s~e~~eGd~g~vGsVR~lt~~~G~p~~--~vkErL~~lDd~~~~~sYs 129 (211)
T 3k3k_A 53 LHAQRIHAPPELVWSIVRRFDKPQTYKH-FIKSCSVEQNFEMRVGCTRDVIVISGLPAN--TSTERLDILDDERRVTGFS 129 (211)
T ss_dssp EEEEEESSCHHHHHHHHTCTTCGGGTCS-SEEEEECCTTCCCCTTCEEEEEESSSSSCE--EEEEEEEEEETTTTEEEEE
T ss_pred EEEEEEcCCHHHHHHHHhCcCChhHcCc-cceEEEEecCCCCCCCcEEEEEecCCCccc--eEEEEEEEEeccCCEEEEE
Confidence 4556899999999999999999999999 599999999975 99999999999886544 599999999 999999999
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEe
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEP 122 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~ 122 (151)
|++|+++ |++|.++++|.|.++| + |+|+++|+.
T Consensus 130 Iieg~lp--v~~Y~sti~V~p~~~g---g--V~Wt~~fes 162 (211)
T 3k3k_A 130 IIGGEHR--LTNYKSVTTVHRFEKE---N--RIWTVVLES 162 (211)
T ss_dssp EEEETTG--GGTCEEEEEEEEEEET---T--EEEEEEEEE
T ss_pred EeecCcc--eeEEEEEEEEEECCCC---C--EEEEEEEEE
Confidence 9999977 9999999999999774 4 999999994
No 20
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=99.95 E-value=2.9e-27 Score=178.14 Aligned_cols=131 Identities=18% Similarity=0.217 Sum_probs=104.6
Q ss_pred EEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEc-CCCC----CCeEEEEEecCCCcceeeeEEEEEEEE-eCccE
Q 031888 5 KGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQ-GDGS----PGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRS 78 (151)
Q Consensus 5 ~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~e-Gdg~----~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~ 78 (151)
....+|+||||+||++++||++++.|+| +|++|++.+ |||+ +|+||.+++.+|.+.. .++|||+.+ +++|+
T Consensus 33 ~~~~~I~Ap~d~VWalVrdF~~p~~w~p-~V~s~~~~e~Gdg~~~~~vGsVR~ltl~~G~P~~--~i~ErL~~lDde~~~ 109 (189)
T 3oji_A 33 LIAHRVDAPAHAIWRFVRDFANPNKYKH-FIKSCTIRVNGNGIKEIKVGTIREVSVVSGLPAS--TSVEILEVLDEEKRI 109 (189)
T ss_dssp EEEEEESSCHHHHHHHHSCTTCGGGTCT-TEEEEEECCC----CCCSTTCEEEEEECSSSSBS--EEEEEEEEEETTTTE
T ss_pred eEEEEEcCCHHHHHHHHhCCCChhhCcc-ccceEEEEecCCCCccCCCCcEEEEEecCCCcCc--eEEEEEEEEeccCCE
Confidence 4567899999999999999999999999 599999987 8875 9999999999886543 599999999 99999
Q ss_pred EEEEEEeCCCCCceeeEEEEEEEEecCC---CC--CCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHH
Q 031888 79 VTYLVVDGELKGMYDPYRVTFSFTPVEG---KQ--DEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLK 142 (151)
Q Consensus 79 ~~y~iieg~~~~~~~~y~~t~~v~p~~~---g~--~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k 142 (151)
++|+|++|+++ +++|+++++|.|.+. |. .++|++.|+..+++..++. .+....++.++++
T Consensus 110 ~sY~Iieg~~p--v~nY~StitV~~~~~~~~G~~~~~~T~v~es~~~D~P~g~t--~e~~~~~v~~v~~ 174 (189)
T 3oji_A 110 LSFRVLGGEHR--LNNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNT--EEDTRMFVDTVVK 174 (189)
T ss_dssp EEEEEEECSBS--SCSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECCTTSC--HHHHHHHHHHHHH
T ss_pred EEEEEEecCCc--cccEEEEEEEEeccccCCCccccCcEEEEEeEecCCCCCCC--HHHHHHHHHHHHH
Confidence 99999999977 899999999998642 10 0379999999999876654 4444444444443
No 21
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=99.94 E-value=3.1e-26 Score=162.03 Aligned_cols=114 Identities=16% Similarity=0.289 Sum_probs=100.2
Q ss_pred ccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEEE
Q 031888 2 KKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSVT 80 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~~ 80 (151)
++++.++++++||++||+++++++.+| |.+ + |. +||+++ +++++++
T Consensus 5 g~~~~e~~i~~~a~k~w~~~~~~~~~p-~g~-----------------~-------G~--------~~ie~iD~~~~~~~ 51 (122)
T 1vjh_A 5 GALSVKFDVKCPADKFFSAFVEDTNRP-FEK-----------------N-------GK--------TEIEAVDLVKKTMT 51 (122)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHTTSC-SST-----------------T-------CE--------EEEEEEETTTTEEE
T ss_pred cEEEEEEEecCCHHHHHHHHhhcccCC-ccC-----------------C-------Cc--------cEEEEEecccCEEE
Confidence 489999999999999999999885556 432 1 21 178888 9999999
Q ss_pred EEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhhc
Q 031888 81 YLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQLS 150 (151)
Q Consensus 81 y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~~ 150 (151)
|+++||+++..|++|+++++|+|.+++ +||+++|+++|++.++..++|+.+++.+.++||+||+|||+
T Consensus 52 y~iieGd~~~~~~~~~~~~~v~~~~~~--~gs~vkwt~~ye~~~~~~~~p~~~~~~~~~~~k~ie~yll~ 119 (122)
T 1vjh_A 52 IQMSGSEIQKYFKTLKGSIAVTPIGVG--DGSHVVWTFHFEKVHKDIDDPHSIIDESVKYFKKLDEAILN 119 (122)
T ss_dssp EEEECTTGGGTEEEEEEEEEEEECSSS--SCEEEEEEEEEEESSTTSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccccccEEEEEEEEEEEEecCC--CCeEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 999999987779999999999998522 38999999999999999999999999999999999999997
No 22
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=99.93 E-value=2.3e-28 Score=188.65 Aligned_cols=114 Identities=18% Similarity=0.310 Sum_probs=88.4
Q ss_pred EEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCC-CCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEEEEEE
Q 031888 6 GQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDG-SPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSVTYLV 83 (151)
Q Consensus 6 ~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg-~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~~y~i 83 (151)
...+|+||||+||++++||++++.|.| +|++|++++||| ++|+||.|++.+|.+.. +++|||+++ +++|+|+|++
T Consensus 82 v~~~I~ApadkVW~lv~Df~~pk~w~p-~I~s~el~eGdg~gvGSVR~lt~~~G~p~~--~vkErLe~iDde~~~~sYsI 158 (223)
T 3qrz_A 82 VVQMIHAPPESVWALVRRFDNPKVYKN-FIRQCRIVQGDGLHVGDLREVMVVSGLPAV--SSTERLEILDEERHVISFSV 158 (223)
T ss_dssp CCCCCSSCHHHHHHHHHCCSSGGGTCS-SCCCCCCCC---CCSSCCCCCCC---CCCC--CCCCCCSEEETTTTEEECCC
T ss_pred EEEEEcCCHHHHHHHHhCCCChhHcch-hcCEEEEEcCCCCCCCeEEEEEecCCCccc--eEEEEEEEEeccCCEEEEEE
Confidence 344899999999999999999777887 599999999997 99999999999886543 599999999 9999999999
Q ss_pred EeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCC
Q 031888 84 VDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTST 127 (151)
Q Consensus 84 ieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~ 127 (151)
++|+++ +++|.++++|.|.++| ||+|+|++.|+|..+..
T Consensus 159 ieG~~p--~~~Y~stikV~p~~dG---GT~V~Ws~~f~pp~g~~ 197 (223)
T 3qrz_A 159 VGGDHR--LKNYRSVTTLHASDDE---GTVVVESYIVDVPPGNT 197 (223)
T ss_dssp TTCSSS--CCCCCCEEEC-----------CCEEEEEECSCSSSC
T ss_pred EeCCCc--cccEEEEEEEEEcCCC---CEEEEEEEEEEcCCCCC
Confidence 999986 8899999999998775 89999999999655543
No 23
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=99.93 E-value=7.4e-25 Score=158.16 Aligned_cols=112 Identities=21% Similarity=0.451 Sum_probs=101.0
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCC-CCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccE
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGD-GSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRS 78 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGd-g~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~ 78 (151)
|.+++.++.|+|||++||++++||.++|+|+|. +++|++.+|+ +++|++|.+++.+|. .++|+|+++ +++++
T Consensus 1 M~~v~~si~I~ap~e~Vw~~l~d~~~~~~w~p~-v~~~~~~~g~~~~~G~~r~~~~~~G~-----~~~e~i~~~d~~~~~ 74 (151)
T 2le1_A 1 MATLRRSVEVAAPAADVWTLVGDFSAIHRWHPQ-VSAPTLRGASPHTPGAERVFGAGTEE-----ELVERLVERDESARR 74 (151)
T ss_dssp CCEEEEEEEESSCHHHHHHHHTTSGGGGGTCTT-CCCEEEESSCTTSTTCEEEESSSSSS-----CEEEEEEEEETTTTE
T ss_pred CceEEEEEEecCCHHHHHHHHhCcCcHHHhcCC-ceEEEEECCCCCCCCeEEEEEeCCCC-----EEEEEEEEEeCCCCE
Confidence 899999999999999999999999999999997 8899998886 589999999986664 389999999 67999
Q ss_pred EEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeC
Q 031888 79 VTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPL 123 (151)
Q Consensus 79 ~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~ 123 (151)
++|++++|+++ +++|.++++|.|.+++ +|.|+|+++|++.
T Consensus 75 ~~~~~~~g~~~--~~~~~~~~~l~~~~~~---gt~v~w~~~f~~~ 114 (151)
T 2le1_A 75 LVYTMPDPPFP--ITNHRAVLEVVPRDDR---HCTVVWTAMFDCS 114 (151)
T ss_dssp EEEEEEECSSS--EEEEEEEEEEEESSSS---CEEEEEEEEEEEC
T ss_pred EEEEEecCCCC--ceeEEEEEEEEECCCC---cEEEEEEEEEEec
Confidence 99999999865 8999999999996553 8999999999983
No 24
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=99.75 E-value=1.5e-16 Score=111.23 Aligned_cols=137 Identities=14% Similarity=0.191 Sum_probs=99.1
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEE
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVT 80 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~ 80 (151)
|.+++.++.|+||+++||+++.|+.++|+|+|. +.+++++++++ .|....+++..++... .+..++...++++++.
T Consensus 1 M~~~~~~~~i~ap~~~V~~~l~d~~~~~~w~p~-~~~~~~~~~~~-~g~~~~~~~~~~g~~~--~~~~~~~~~~~~~~i~ 76 (147)
T 2d4r_A 1 MPEVRAERYIPAPPERVYRLAKDLEGLKPYLKE-VESLEVVAREG-ARTRSRWVAVAMGKKV--RWLEEEEWDDENLRNR 76 (147)
T ss_dssp -CEEEEEEEESSCHHHHHHHHHCHHHHGGGCTT-EEEEEEEEEET-TEEEEEEEEEETTEEE--EEEEEEEEETTTTEEE
T ss_pred CCeEEEEEEeCCCHHHHHHHHhChhhhhhhccc-ccEEEEEEeCC-CccEEEEEEEeCCceE--EEEEEEEEcCCCcEEE
Confidence 889999999999999999999999999999997 67777765432 2556566554333222 2555655447889999
Q ss_pred EEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCC--h----HHHHHHHHHHHHHHHhhhh
Q 031888 81 YLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPA--P----EKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 81 y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~--~----~~~~~~~~~~~k~ie~~l~ 149 (151)
|++.+|+ ++.+.+++++.|.++ ||.|+|+.+|++.++.... . ..+.+.+..+++++.+++-
T Consensus 77 ~~~~~g~----~~~~~~~~~~~~~~~----gT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e 143 (147)
T 2d4r_A 77 FFSPEGD----FDRYEGTWVFLPEGE----GTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVL 143 (147)
T ss_dssp EEEEEES----CSEEEEEEEEEECSS----SEEEEEEEEEECCCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCC----hhheEEEEEEEECCC----CcEEEEEEEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999886 567789999999865 6999999999987543211 1 1223555666666666553
No 25
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=99.68 E-value=2.8e-15 Score=110.46 Aligned_cols=116 Identities=11% Similarity=0.149 Sum_probs=89.2
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEE-eCccEE
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGV-ETGRSV 79 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~-~~~~~~ 79 (151)
|.+++.++.|++||++||+++.|+.++|+|+|. +.++++++++++ +..-.+.+..++... .+..++. + +++++|
T Consensus 4 M~~v~~si~I~ap~~~V~~~v~D~~~~p~~~P~-~~~~~v~~~~~~-~~~~~~~~~~~G~~~--~~~s~~~-~~~~~~~i 78 (172)
T 3tfz_A 4 MRHVEHTVTVAAPADLVWEVLADVLGYADIFPP-TEKVEILEEGQG-YQVVRLHVDVAGEIN--TWTSRRD-LDPARRVI 78 (172)
T ss_dssp CEEEEEEEEESSCHHHHHHHHHCGGGHHHHCSS-EEEEEEEEEETT-EEEEEEEEEETTEEE--EEEEEEE-EETTTTEE
T ss_pred CcEEEEEEEeCCCHHHHHHHHHhHHHHHhhCcc-cceEEEEecCCC-EEEEEEEEecCCEEE--EEEEEEE-EeCCCCEE
Confidence 889999999999999999999999999999997 778888866432 222234444343322 2444443 4 557899
Q ss_pred EEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCC
Q 031888 80 TYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTS 126 (151)
Q Consensus 80 ~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~ 126 (151)
.|++++++.+ ++.+.++++|.|.+++ +|.|+|+.+|+...+.
T Consensus 79 ~~~~~~~~gp--f~~~~g~w~f~~~~~~---~t~V~~~~~~~~~~~~ 120 (172)
T 3tfz_A 79 AYRQLETAPI--VGHMSGEWRAFTLDAE---RTQLVLTHDFVTRAAG 120 (172)
T ss_dssp EEEEEECCTT--EEEEEEEEEEEEEETT---EEEEEEEEEEEECCCC
T ss_pred EEEEeeCCCC--hhhcEEEEEEEECCCC---cEEEEEEEEEEEcChh
Confidence 9999976544 8999999999998764 8999999999987654
No 26
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=99.67 E-value=2.8e-15 Score=109.43 Aligned_cols=106 Identities=11% Similarity=0.119 Sum_probs=87.1
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEE
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVT 80 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~ 80 (151)
|.+++.++.|+|||++||+++.|+.+.|.|.|. +.++++ +|...+|+.+.++...+.+ +.++|++++++++++
T Consensus 17 ~~~i~~si~I~Appe~VW~~ltD~~~~~~W~p~-v~~~~~-~G~~~~G~~~~~~~~~~~~-----~~~~v~~~~p~~~~~ 89 (155)
T 3ijt_A 17 SMKFSFELAVNTKKEDAWTYYSQVNQWFVWEGD-LEQISL-EGEFTTGQKGKMKMEDMPE-----LAFTLVEVRENQCFS 89 (155)
T ss_dssp CEEEEEEEEESSCHHHHHHHHHCGGGGGGTSTT-EEEEEE-SSSSSTTCEEEEEETTSCC-----EEEEECCCBTTTEEE
T ss_pred cEEEEEEEEEcCCHHHHHHHHhCcccccccchh-hEeeec-cCCCCCCCEEEEEeCCCCc-----EEEEEEEEeCCcEEE
Confidence 458899999999999999999999999999996 777775 6666889999888765542 788888778888899
Q ss_pred EEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEE
Q 031888 81 YLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFE 121 (151)
Q Consensus 81 y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~ 121 (151)
|+..- + ...|..+.++.|.+++ +|.|+|+.+|.
T Consensus 90 ~~~~~---p--~~~~~~~h~l~p~~~g---gTrvt~~~~~~ 122 (155)
T 3ijt_A 90 DLTAT---P--FGNVLFEHEILENPDG---TISLRHSVSLT 122 (155)
T ss_dssp EEEEE---T--TEEEEEEEEEEECTTS---CEEEEEEEEES
T ss_pred EEEec---C--CeEEEEEEEEEEcCCC---cEEEEEEEEEE
Confidence 86532 2 3467788899998665 89999999994
No 27
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=99.66 E-value=8.9e-15 Score=107.22 Aligned_cols=115 Identities=14% Similarity=0.260 Sum_probs=86.4
Q ss_pred Cc-cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEE--ecCCCcceeeeEEEEEEEE-eCc
Q 031888 1 MK-KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFK--LGPAVHSYVKESIEKIEGV-ETG 76 (151)
Q Consensus 1 M~-~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~--~~~g~~~~~~~~kErl~~~-~~~ 76 (151)
|+ +++.++.|++||++||+++.|+.++|.|+|. +.+++++++++..-.+| +. ..-++...+ +..+. .+ +++
T Consensus 1 M~~~v~~si~I~a~~~~V~~lV~Dve~yP~~~p~-~~~~~vl~~~~~~~~~r-l~~~~~~~G~~~~--~ts~~-~~d~~~ 75 (159)
T 3tl1_A 1 MAGHTDNEITIAAPMELVWNMTNDIEKWPGLFSE-YASVEVLGRDDDKVTFR-LTMHPDADGKVWS--WVSER-VADPVT 75 (159)
T ss_dssp CCSEEEEEEEESSCHHHHHHHHTCGGGHHHHCSS-EEEEEEEEECSSEEEEE-EEECCCTTSCCCE--EEEEE-EEETTT
T ss_pred CCCeeEEEEEecCCHHHHHHHHHhHHHhhhhhhC-ceEEEEEecCCCEEEEE-EEEEeccCceEEE--EEEEE-EEcCCC
Confidence 66 4899999999999999999999999999997 77778877664322333 43 333332222 33332 35 678
Q ss_pred cEEEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCC
Q 031888 77 RSVTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTST 127 (151)
Q Consensus 77 ~~~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~ 127 (151)
++|.|++++.+ + |+++.++++|.|.++ ||.|+|+.+|+..++..
T Consensus 76 ~~I~~~~~~~g-P--f~~l~g~W~f~p~~~----gt~V~~~~df~~~~~~p 119 (159)
T 3tl1_A 76 RTVRAQRVETG-P--FQYMNIVWEYAETAE----GTVMRWTQDFAMKPDAP 119 (159)
T ss_dssp TEEEEEESSCT-T--EEEEEEEEEEEEETT----EEEEEEEEEEEECTTCS
T ss_pred CEEEEEEccCC-C--hhhccCEEEEEECCC----CEEEEEEEEEEecCCCC
Confidence 89999988433 3 899999999999866 79999999999876643
No 28
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=99.64 E-value=1.8e-14 Score=106.62 Aligned_cols=114 Identities=19% Similarity=0.323 Sum_probs=85.2
Q ss_pred Cc-cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEE-EEE--ecCCCcceeeeEEEEEEEE-eC
Q 031888 1 MK-KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLR-LFK--LGPAVHSYVKESIEKIEGV-ET 75 (151)
Q Consensus 1 M~-~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR-~~~--~~~g~~~~~~~~kErl~~~-~~ 75 (151)
|. .++.++.|++||++||+++.|+.++|.|+|. +.+++++++++. .+| ++. ...++...+ +..++ .+ +.
T Consensus 1 Ma~~v~~si~I~a~~~~v~~lv~Dv~~~p~w~p~-~~~~~~~~~~~~--~~~~~l~~~~~~~G~~~~-~ts~~--~~d~~ 74 (169)
T 3tvq_A 1 MAARTDNSIVVNAPFELVWDVTNDIEAWPELFSE-YAEAEILRQDGD--GFDFRLKTRPDANGRVWE-WVSHR--VPDKG 74 (169)
T ss_dssp CCEEEEEEEEESSCHHHHHHHHTCGGGHHHHCTT-EEEEEEEEEETT--EEEEEEEECCCTTSCCCE-EEEEE--EEEGG
T ss_pred CCCeEEEEEEecCCHHHHHHHHHhhhHHHHHHhh-eeEEEEEecCCC--EEEEEEEEEecCCCeEEE-EEEEE--EEcCC
Confidence 44 6899999999999999999999999999997 777888776532 333 233 222332222 33343 25 67
Q ss_pred ccEEEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCC
Q 031888 76 GRSVTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTST 127 (151)
Q Consensus 76 ~~~~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~ 127 (151)
.++|.|++++++ + +++|.++|+|+|.++ ||.|+|+.+|+..++..
T Consensus 75 ~~~I~~~~l~~g-P--f~~~~g~W~f~p~~~----gt~V~~~~df~~~~~~p 119 (169)
T 3tvq_A 75 SRTVRAHRVETG-P--FAYMNLHWTYRAVAG----GTEMRWVQEFDMKPGAP 119 (169)
T ss_dssp GTEEEEEESSCT-T--EEEEEEEEEEEEETT----EEEEEEEEEEEECTTCS
T ss_pred CcEEEEEEcCCC-C--hhheeeEEEEEECCC----CEEEEEEEEEEecCCCc
Confidence 889999987544 3 899999999999876 69999999999876543
No 29
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=99.56 E-value=3.4e-14 Score=101.63 Aligned_cols=136 Identities=16% Similarity=0.224 Sum_probs=95.7
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCC--C-CCCeEEEEEecCCCcceeeeEEEEEEEEeCc-
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGD--G-SPGSLRLFKLGPAVHSYVKESIEKIEGVETG- 76 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGd--g-~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~- 76 (151)
|++++.++.|++|+++||+++.|+.++|+|+|. +.++++++.+ + +.+....+.+.-++... .+..++. ++++
T Consensus 1 M~~~~~s~~i~ap~~~v~~~v~D~~~~p~~~p~-~~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~v~-~~~~~ 76 (148)
T 1t17_A 1 MHRHVVTKVLPYTPDQLFELVGDVDAYPKFVPW-ITGMRTWNGRVDGAVSTVDAEAQVGFSFLRE--KFATRVR-RDKDA 76 (148)
T ss_dssp CCEEEEEEEESSCTHHHHHHHTTTTCCSSCCSS-CCCCCEEEEEEETTEEEEEEEEECSTTSSCC--EEEEEEE-EETTT
T ss_pred CCEEEEEEEecCCHHHHHHHHHHHhhHHhhCCC-cCeeEEEEecCCCCCceEEEEEEEEecceeE--EEEEEEE-EcCCC
Confidence 899999999999999999999999999999998 5666666432 1 13345556654443222 3556655 4344
Q ss_pred cEEEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCC--hHHHHHHHHHHHHHHHhhh
Q 031888 77 RSVTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPA--PEKARDAALGFLKCFDKFQ 148 (151)
Q Consensus 77 ~~~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~k~ie~~l 148 (151)
+++.+++++|+ ++.+.+++++.|.++ +|.|+++++|++.++.... ...+...+..+.+++++.+
T Consensus 77 ~~i~~~~~~G~----f~~~~g~w~f~~~~~----gt~v~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~f~~r~ 142 (148)
T 1t17_A 77 RSIDVSLLYGP----FKRLNNGWRFMPEGD----ATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARA 142 (148)
T ss_dssp CEEEEEESSTT----SSCEEEEEEEEEETT----EEEEEEEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEECCCC----hhccEEEEEEEECCC----CeEEEEEEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 49999999985 788999999999866 6999999999987542100 0012344455556655543
No 30
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=99.50 E-value=1.8e-12 Score=93.72 Aligned_cols=110 Identities=13% Similarity=0.172 Sum_probs=81.3
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
+++.++.|++|+++||+++.|+.++|+|+|. +.+++.+++. ++--.+....|.... .+.-++++.+++++|.|+
T Consensus 5 ~v~~s~~I~ap~e~V~~~~~D~e~~p~w~p~-~~~v~~~~~~---~~~~~~~~~~G~~~~--~~~~~v~e~~p~~~i~~~ 78 (155)
T 3ggn_A 5 VVRDAVTIGKPAEQLYAVWRDLPGLPLLMTH-LRSVEVLDDK---RSRWTVEAPAPLGTV--SWEAELTADEPGKRIAWR 78 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGGHHHHSTT-CCEEEECSSS---EEEEEEECCTTTCEE--EEEEEEEEEETTTEEEEE
T ss_pred EEEEEEEEcCCHHHHHHHHhCHHHhHHHhhh-ceEEEEecCC---eeEEEEEecCCcceE--EEEEEEEEecCCCEEEEE
Confidence 6788999999999999999999999999997 7788876541 222223332231333 366677766789999999
Q ss_pred EEeCCCCCceeeEEEEEEEEecC-CCCCCccEEEEEEEEEeCCC
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVE-GKQDEMCIAEWAAEFEPLTT 125 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~-~g~~~~s~v~W~~~~~~~~~ 125 (151)
.++|+ +..+.++++|.|.+ + ++|.|+++++|++.++
T Consensus 79 ~~~g~----~~~~~g~~~F~~~~~~---~gT~V~~~~~~~~~~~ 115 (155)
T 3ggn_A 79 SLPGA----RIENSGEVLFRPAPGA---RGTEVVVRLTYRPPGG 115 (155)
T ss_dssp ECTTC----SSCEEEEEEEEECSSS---SCEEEEEEEEEC----
T ss_pred ECCCC----CcceEEEEEEEECCCC---CceEEEEEEEEECCCc
Confidence 99886 34588899999984 4 3899999999998653
No 31
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=99.46 E-value=3.5e-12 Score=91.96 Aligned_cols=139 Identities=16% Similarity=0.105 Sum_probs=90.1
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
+++.++.|++|+++||+++.|+.++++|+|+ +.++++..|++ ....++...|.....-..+.++.++++++++.++
T Consensus 4 ~i~~~~~i~ap~e~Vw~~l~D~e~~~~w~p~-~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (162)
T 2pcs_A 4 NGNGSIELKGTVEEVWSKLMDPSILSKCIMG-CKSLELIGEDK---YKADLQIGIAAVKGKYDAIIEVTDIKPPYHYKLL 79 (162)
T ss_dssp EEEEEEEEESCHHHHHHHHTCHHHHHHHSTT-EEEEEEEETTE---EEEEEEECCGGGCEEEEEEEEEEEEETTTEEEEE
T ss_pred EEeeEEEecCCHHHHHHHhcCHHHHHhhCCC-ceEeEEeCCCe---EEEEEEEEeeeEEEEEEEEEEEEecCCCcEEEEE
Confidence 6899999999999999999999999999997 66777764421 2223444333221110123355555677888877
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChH-----HHHHHHHHHHHHHHhhhh
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPE-----KARDAALGFLKCFDKFQL 149 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~-----~~~~~~~~~~k~ie~~l~ 149 (151)
....+. .......++++|.|.+++ +|.++|+++++..+....... ..+..+..+++++.++|.
T Consensus 80 ~~~~~~-~~~~~~~~~~~l~~~~~~---gT~v~~~~~~~~~g~l~~~~~~l~~~~~~~~~~~~~~~lk~~~e 147 (162)
T 2pcs_A 80 VNGEGG-PGFVNAEGVIDLTPINDE---CTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIA 147 (162)
T ss_dssp EEEEET-TEEEEEEEEEEEEESSSS---EEEEEEEEEEEEESGGGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCC-CccEEEEEEEEEEecCCC---cEEEEEEEEEEECCCHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 753221 114567899999996554 899999999998665321111 123444666666666653
No 32
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=99.43 E-value=1.1e-11 Score=88.49 Aligned_cols=113 Identities=14% Similarity=0.164 Sum_probs=76.3
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
+++.++.|++|+++||+++.|+.++++|+|+ +.+++ ..|+ +....++...|.....-..+.++.++++++++.|+
T Consensus 14 ~i~~~~~i~ap~e~Vw~~l~D~~~~~~w~p~-~~~~~-~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~ 88 (157)
T 2ns9_A 14 RYEGSFEVSKTPEEVFEFLTDPKRFSRAFPG-FKSVE-VEDG---SFTIELRLSLGPLRGDARVRASFEDLEKPSKATVK 88 (157)
T ss_dssp EEEEEEEESSCHHHHHHHHTCHHHHGGGSTT-EEEEE-EETT---EEEEEEEEESSSSEEEEEEEEEEEEEETTTEEEEE
T ss_pred EEeeEEEEcCCHHHHHHHHcCHHHHHhhCCC-ceEEE-ECCC---EEEEEEEEEEcceeEEEEEEEEEEecCCCcEEEEE
Confidence 6899999999999999999999999999997 56777 4442 12222333333211110123344455677888887
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCC
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTT 125 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~ 125 (151)
....+....++ +.+++++.|.++ +|.++|+.+|+..+.
T Consensus 89 ~~~~~~~~~~~-~~~~~~l~~~~~----gT~v~~~~~~~~~g~ 126 (157)
T 2ns9_A 89 GSGRGAGSTLD-FTLRFAVEPSGG----GSRVSWVFEGNVGGL 126 (157)
T ss_dssp EEEECSSEEEE-EEEEEEEEEETT----EEEEEEEEEEEEEEG
T ss_pred EEecCCCccEE-EEEEEEEEeCCC----cEEEEEEEEEEECcC
Confidence 53222111244 788999999863 899999999987654
No 33
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=99.31 E-value=3.1e-10 Score=79.86 Aligned_cols=139 Identities=13% Similarity=0.071 Sum_probs=95.6
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEec--CCCcceeeeEEEEEEEEeCccE
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLG--PAVHSYVKESIEKIEGVETGRS 78 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~--~g~~~~~~~~kErl~~~~~~~~ 78 (151)
|.+++.++.|+||+++||+++.|...+++|.+..--.+...+++..+|..-++.+. +++... ...-++.+++++++
T Consensus 2 ~~~~~~~~~i~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~~g~~~--~~~~~v~~~~p~~~ 79 (147)
T 1z94_A 2 PNTIRLHRVLSAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHDARVGGAYKMEFLAFASGQKH--AFGGRYLELVPGER 79 (147)
T ss_dssp CCCEEEEEEESSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEECCSTTCEEEEEEEETTTCCEE--EEEEEEEEEETTTE
T ss_pred CcEEEEEEEeCCCHHHHHHHhCCHHHHhhccCCCCEeeeEEEEccCCCcEEEEEEEECCCCCEE--EEEEEEEEEcCCCE
Confidence 45789999999999999999999999999997421122233455566766666553 233222 36667777788999
Q ss_pred EEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 79 VTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 79 ~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
|.|+...++.. .-.....++++.|.++ +|.++++.++.+.. ............++.+|.++|-
T Consensus 80 l~~~~~~~~~~-~~~~~~~~~~l~~~~~----gT~l~~~~~~~~~~---~~~~~~~~gw~~~L~~L~~~le 142 (147)
T 1z94_A 80 IRYTDRFDDAG-LPGDMITTITLAPLSC----GADLSIVQEGIPDA---IPPENCYLGWQQSLKQLAALVE 142 (147)
T ss_dssp EEEEEEESCCC----CEEEEEEEEEETT----EEEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEEEeCCC-CCCcEEEEEEEEecCC----CEEEEEEEEcCCch---hhHHHHHHHHHHHHHHHHHHHH
Confidence 99998765421 0124678899999854 89999998875422 1234445666778888888774
No 34
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=99.27 E-value=2.1e-10 Score=83.41 Aligned_cols=134 Identities=6% Similarity=0.096 Sum_probs=85.5
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEE---ecCCCcceeeeEEEEEEEEeCccEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFK---LGPAVHSYVKESIEKIEGVETGRSV 79 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~---~~~g~~~~~~~~kErl~~~~~~~~~ 79 (151)
+++.++.|++||++||+++.|+.++|.+.|++..-.+. ++ |.. ++. +.-|.......+..+++...+++++
T Consensus 8 ~v~~s~~I~ap~e~v~~lv~Dve~w~~~yp~~~p~~~~--~~---~~~-~~~~a~l~vg~~~~~~~~~s~~~~~~~~~~I 81 (161)
T 3p9v_A 8 ELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKLVDL--GN---NAY-RWEMEKVGVDKHAIQSVYACTYHADKEAGKI 81 (161)
T ss_dssp EEEEEEEESSCHHHHHHHHTCHHHHHTTSTTEEEEEEE--ET---TEE-EEEECCBSSGGGCBCCEEEEEEEEETTTTEE
T ss_pred EEEEEEEEcCCHHHHHHHHhChhhhHhhCCCeEEEEEc--CC---Cce-EEEEEEEeeeeEEEEEEEEEEEEEcCCCCEE
Confidence 56788999999999999999999966666653322222 22 222 222 2333322100234443321448999
Q ss_pred EEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChH-----HHHHHHHHHHHHHHhhh
Q 031888 80 TYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPE-----KARDAALGFLKCFDKFQ 148 (151)
Q Consensus 80 ~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~-----~~~~~~~~~~k~ie~~l 148 (151)
.+++++|+. .++..+++++.|.++| +|.|+|+++|+...+.+.--. .+.+.+..|.+++++-+
T Consensus 82 ~~~~~~g~~---~~~l~g~w~f~p~~~g---~t~V~~~~~~e~~~pl~~ll~~~~~~~~~~~~~~~v~af~~ra 149 (161)
T 3p9v_A 82 TWSPIKGEG---NGVVSGSWTLSAKGDN---ATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYMANL 149 (161)
T ss_dssp EEEECTTST---TEEEEEEEEEEESSSS---CEEEEEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcc---ceeEEEEEEEEECCCC---eEEEEEEEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998873 3888999999999874 799999999999855432111 22444456666665543
No 35
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=99.19 E-value=2.8e-10 Score=80.51 Aligned_cols=126 Identities=12% Similarity=0.070 Sum_probs=87.1
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEE
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVT 80 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~ 80 (151)
|.+++.++.|+||+++||+++.|...+++|.|. + +++..+|...++.+ +++. +.-++.++++++++.
T Consensus 7 ~~~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~-~------~~~~~~G~~~~~~~-~~g~-----~~~~v~e~~p~~~l~ 73 (143)
T 1xn6_A 7 LNDIKQTIVFNASIQKVWSVVSTAEGIASWFMP-N------DFVLEVGHEFHVQS-PFGP-----SPCKVLEIDEPNHLS 73 (143)
T ss_dssp CCCEEEEEEESSCHHHHHHTTSCSHHHHTTSCC-B------CCCCCTTCEECBCC-TTCC-----CCEEEEEEETTTEEE
T ss_pred CCEEEEEEEEcCCHHHHHHHHhCHhHHHHhcCC-C------CcCcCCCCEEEEEE-cCCC-----ceEEEEEEeCCCEEE
Confidence 347899999999999999999999999999986 1 34445666655555 3332 456677777889999
Q ss_pred EEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCC-CCCCC----hH----HHHHHHHHHH-HHHHhhhh
Q 031888 81 YLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLT-TSTPA----PE----KARDAALGFL-KCFDKFQL 149 (151)
Q Consensus 81 y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~-~~~~~----~~----~~~~~~~~~~-k~ie~~l~ 149 (151)
|+...+ ....++++.|.++| +|.++++.+..+.. +..+. .. ........++ .+|.+||.
T Consensus 74 ~~~~~~-------~~~~~~~l~~~~~g---~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~~l~~~L~~~le 142 (143)
T 1xn6_A 74 FSWDTD-------GWVVSFDLKDLGDN---KTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNEKLKKVVE 142 (143)
T ss_dssp EEETTT-------TEEEEEEEEEEETT---EEEEEEEEECCCSTTCBCTTTCSBHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred EEEeCC-------CEEEEEEEEECCCC---cEEEEEEEEccCccccccccccchhhHHHHHHHHhHHHHHHHHHHHHhc
Confidence 987644 36778899998764 79999887754432 11111 11 2234456666 77777663
No 36
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=99.19 E-value=1.1e-09 Score=76.62 Aligned_cols=133 Identities=20% Similarity=0.148 Sum_probs=89.4
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
+++.++.|+||+++||+++.|+..+++|.++.. + +++..+|..-++....++... .+..++.++++++++.|+
T Consensus 6 ~i~~~~~i~ap~e~Vw~~ltd~~~~~~W~~~~~--~---~~~~~~G~~~~~~~~~~g~~~--~~~~~v~~~~p~~~l~~~ 78 (146)
T 2leq_A 6 IAQVKTVINAPIEKVWEALVNPEIIKEYMFGTT--V---VSDWKEGSQIVWKGEWKGKAY--EDKGTILQFNERSILQYS 78 (146)
T ss_dssp EEEEEEEECSCHHHHHHHHSCTTHHHHHSSSCE--E---ECCCSTTCEEEEEEEETTEEE--EEEEEEEEEETTTEEEEE
T ss_pred eEEEEEEECCCHHHHHHHHcCHHHhceeEcCCc--c---eeccCCCCEEEEEecCCCcee--cccEEEEEEcCCCEEEEE
Confidence 688999999999999999999999999963211 2 344455665566665554322 266777777889999998
Q ss_pred EEeC--CCC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 83 VVDG--ELK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 83 iieg--~~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
.... ++. ..-.....++++.|.++ +|.++|+.+..+.. .......+....++.+|.+||-
T Consensus 79 ~~~~~~g~~~~~~~~~~~~~~l~~~~~----gT~l~~~~~~~~~~---~~~~~~~~gw~~~l~~Lk~~le 141 (146)
T 2leq_A 79 HFSPLTGKPDLPENYHVVTITLTALKK----GVEVELTQDNNETE---KEQKHSEDNWNTMLEGLKKFLE 141 (146)
T ss_dssp CBCGGGCCCSCGGGSCEEEEEEEECSS----CEEEEEEEEEESSH---HHHHHHHHHHHHHHHHHHHHHG
T ss_pred EccCccCCCCCCCCceEEEEEEEEcCC----CeEEEEEEecCCch---hhHhhHHhhHHHHHHHHHHHHh
Confidence 7632 111 11235778899999754 79999997644321 1122334556777788877764
No 37
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=99.12 E-value=6.4e-09 Score=73.45 Aligned_cols=128 Identities=13% Similarity=0.114 Sum_probs=87.9
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCccccc-CccccceEEEEcCCCCCCeEEEEEec--CCCcceeeeEEEEEEEEeCccEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKI-NPEMLAHAEYIQGDGSPGSLRLFKLG--PAVHSYVKESIEKIEGVETGRSV 79 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~-~P~~v~s~~~~eGdg~~GsvR~~~~~--~g~~~~~~~~kErl~~~~~~~~~ 79 (151)
+++.++.|+||+++||+++.|...+++| .+.---.+...+++..+|..-++.+. +|.... .+.-++.+++++++|
T Consensus 2 ~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~g~~~~--~~~~~v~~~~p~~~l 79 (142)
T 2lcg_A 2 NITVETTVAAPVGKVWRAYTTPEDIKQWNAASDDWHTTAATVDLREGGAFSSRMEAKDGSMGF--DFAGTYTKVVENKRI 79 (142)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHCCSSTTEEEEEEEECCSTTCEEEEEEEETTSSCEE--EEEEEEEEEETTTEE
T ss_pred eEEEEEEeCCCHHHHHHHhCCHHHHhcCCCCCCCccceeeEEccccCCEEEEEEEcCCCCcee--eeEEEEEEEcCCCEE
Confidence 5788999999999999999999999999 65211122233455566766665554 233122 256677777889999
Q ss_pred EEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 80 TYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 80 ~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
.|+.- | ...++++.|.++ +|.++++.++. .....+...+....++.+|.++|-
T Consensus 80 ~~~~~-g--------~~~~~~l~~~~~----gT~l~~~~~~~----~~~~~~~~~~Gw~~~L~~L~~~le 132 (142)
T 2lcg_A 80 EYAFG-D--------RTAKVEFLEAPQ----GVTVRVSFVAE----TEYPVEQQQQGWQAILNNFKRHVE 132 (142)
T ss_dssp EEEET-T--------EEEEEEEEEETT----EEEEEEEEECC----SSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcC-C--------CEEEEEEEEcCC----CEEEEEEEecC----CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99961 1 677888999865 89999987652 112234455666778888888764
No 38
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=99.09 E-value=1.5e-08 Score=74.33 Aligned_cols=138 Identities=9% Similarity=0.017 Sum_probs=89.6
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCccEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
.+..++.|+||+++||+++.|...+++|.+.---.+...+++..+|..-.+.+. +++... ...-++.+++++++|.|
T Consensus 23 ~i~~~r~i~Ap~e~Vw~altdpe~~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~--~~~~~v~e~~p~~rl~~ 100 (178)
T 1xuv_A 23 EIIITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPKNGGSWQYIQKDPEGNEY--AFHGVNHDVTEPERIIS 100 (178)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEECCSTTCEEEEEEECTTSCEE--EEEEEEEEEETTTEEEE
T ss_pred EEEEEEEECCCHHHHHHHhCCHHHHHhCCCCCCccceEEEEecccCCEEEEEEECCCCCEE--EEEEEEEEEeCCCEEEE
Confidence 578889999999999999999999999975311123333455556655555443 233322 25667777788999999
Q ss_pred EEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH-----HHHHHHHHHHHHhhhh
Q 031888 82 LVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA-----RDAALGFLKCFDKFQL 149 (151)
Q Consensus 82 ~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~-----~~~~~~~~k~ie~~l~ 149 (151)
+..-++.+..-.....+++|.|.+++ +|.++++..|.+.. .-+.. .+....++.+|.+||-
T Consensus 101 ~~~~~~~~~~~~~~~v~~~l~~~~~g---gT~lt~~~~~~~~~----~~~~~~~~~~~~Gw~~~L~~Lk~~le 166 (178)
T 1xuv_A 101 TFEFEGLPEKGHVILDTARFEALPGD---RTKLTSHSVFQTIE----DRDGMLQSGMEEGINDSYERLDELLE 166 (178)
T ss_dssp EEEETTSSSSCCCEEEEEEEEEETTT---EEEEEEEEECSSHH----HHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCcEEEEEEEEEcCCC---CEEEEEEEEeCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 98654422111247788999998754 89999998852110 01111 2455677778877764
No 39
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=99.06 E-value=8e-09 Score=74.95 Aligned_cols=140 Identities=8% Similarity=-0.072 Sum_probs=90.6
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCccEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
.++.++.|+||+++||+++.|...+++|.+.---.+...++|..+|..-++.+. +++... ...-++.+++++++|.|
T Consensus 15 ~i~~~~~i~ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~--~~~~~v~e~~p~~rl~~ 92 (171)
T 2il5_A 15 EVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNGKVN--VIEGIYESLVMDEYVKM 92 (171)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEECCSTTCEEEEEEECGGGCEE--EEEEEEEEEETTTEEEE
T ss_pred eEEEEEEeCCCHHHHHHHHCCHHHHHhccCCCCccceEEEecccCCCEEEEEEECCCCCEE--EEEEEEEEEcCCCEEEE
Confidence 578899999999999999999998988885321123333456556665555543 233222 25667777789999999
Q ss_pred EEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCC--CCC---------ChHHHHHHHHHHHHHHHhhhh
Q 031888 82 LVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTT--STP---------APEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 82 ~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~--~~~---------~~~~~~~~~~~~~k~ie~~l~ 149 (151)
+...++.+. .....++++.|.++| +|.++++.+..+..+ ... ..+...+....++.+|.+||-
T Consensus 93 ~~~~~~~~~--~~~~~~~~l~~~~~g---~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~~L~~L~~~le 166 (171)
T 2il5_A 93 TIGMPGLSE--TQDVIEVEFFERETG---GTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIE 166 (171)
T ss_dssp EESCC--CC--CCEEEEEEEEECSSS---SEEEEEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCC--CcEEEEEEEEECCCC---CEEEEEEEEeccCcccccccchhccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 987554321 246788999998764 799999987544311 110 011223445667788887764
No 40
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=99.01 E-value=3.4e-08 Score=70.15 Aligned_cols=129 Identities=17% Similarity=0.156 Sum_probs=86.2
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCccccc-CccccceEEEEcCCCCCCeEEEEEec-CCCc-ceeeeEEEEEEEEeCccEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKI-NPEMLAHAEYIQGDGSPGSLRLFKLG-PAVH-SYVKESIEKIEGVETGRSV 79 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~-~P~~v~s~~~~eGdg~~GsvR~~~~~-~g~~-~~~~~~kErl~~~~~~~~~ 79 (151)
++..++.|+||+++||+++.|...+++| .+.---.+...++|..+|..-++.+. +++. .. .+.-++.+++++++|
T Consensus 3 ~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~--~~~g~v~e~~p~~~l 80 (144)
T 2l8o_A 3 KITVEVTVYAAIEKVWKYWNEPAHIMKWCQASPEWHVPAAQNDLKAGGTFTTTMAAKDGSMSF--DFGGVYDQVKTNDLI 80 (144)
T ss_dssp SEEEEEEECSCHHHHHHHHHCHHHHHHHSTTCTTCEEEEEECCCSTTCEEEEEEECTTSSCEE--EEEEEEEEEETTTEE
T ss_pred EEEEEEEECCCHHHHHHHHCCHHHHhhccCCCCCcccceeEEccCCCCEEEEEEECCCCCcee--eeeEEEEEEeCCCEE
Confidence 5788999999999999999999999999 64211123334566555554444443 2332 12 255667777899999
Q ss_pred EEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 80 TYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 80 ~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
.|+.- | ....++++.|.++ +|.++.+..+ + .....+...+-...++.+|++||-
T Consensus 81 ~~~~~-g-------~~~v~~~l~~~~~----gT~l~~~~~~-~---~~~~~~~~~~Gw~~~L~~L~~~le 134 (144)
T 2l8o_A 81 EYTIG-D-------GRKVRIVFTHTGD----TTNIVESFDP-E---ETNPRELQQSGWQAILNSFKSYTE 134 (144)
T ss_dssp EEEET-T-------CCEEEEEEEECSS----SEEEEEEECC-C---SSSCHHHHHHHHHHHHHHHHHHHG
T ss_pred EEEeC-C-------CeEEEEEEEEcCC----CEEEEEEEeC-C---CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99953 3 2567888999754 7998887655 1 112234445566778888888774
No 41
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=99.00 E-value=3.7e-08 Score=71.24 Aligned_cols=138 Identities=5% Similarity=0.041 Sum_probs=91.2
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccc--cceEEEEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCccEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEM--LAHAEYIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGRSV 79 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~--v~s~~~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~~~ 79 (151)
.+..++.|+||+++||+++.|...+++|.+.. +. +...++|..+|..-++.+. +++... .+.-++.+++++++|
T Consensus 9 ~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~-~~~~~~d~~~Gg~~~~~~~~~~G~~~--~~~g~v~e~~p~~rl 85 (161)
T 3rd6_A 9 TFTIERTYPQSPDRVFHAFADKATVRRWRVDGDGFT-VAEFSFDFRVGGGEVSRFSYGGGPEV--RLDAQFQDIVPDQRI 85 (161)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHHHHTCCCCC----CEEEECCSTTCEEEEEECSTTSCCE--EEEEEEEEEETTTEE
T ss_pred eEEEEEEECCCHHHHHHHhcCHHHHhhccCCCCCce-eeEEEEccCcCCEEEEEEECCCCCEE--EEEEEEEEEcCCCEE
Confidence 57888899999999999999999999998432 11 1222345455655555553 223222 256677777888999
Q ss_pred EEEEEeC--CCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhhc
Q 031888 80 TYLVVDG--ELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQLS 150 (151)
Q Consensus 80 ~y~iieg--~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~~ 150 (151)
.|+..-. +.+ ......++++.|.++ +|.++++.+.-+..+. ...+...+-...++..|++||..
T Consensus 86 ~~~~~~~~~~~~--~~~s~v~~~l~~~~~----gT~lt~~~~~~~~~~~-~~~~~~~~GW~~~L~~L~~~le~ 151 (161)
T 3rd6_A 86 VFSYRMAIGPQP--MSASLTTVELTPSGD----GTRLTYTEQGAFFDGV-DSAKGREEGTRGLLEALAAELQK 151 (161)
T ss_dssp EEEEEEEETTEE--EEEEEEEEEEEEETT----EEEEEEEEEEEEETTC-CCHHHHHHHHHHHHHHHHHHC--
T ss_pred EEEEEecCCCCC--CCceEEEEEEEECCC----CEEEEEEEEecCcchh-hhHHHHHHHHHHHHHHHHHHHhh
Confidence 9987521 211 344668889999765 7999999886532211 12355667778889999988753
No 42
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=99.00 E-value=9.6e-09 Score=73.43 Aligned_cols=139 Identities=9% Similarity=-0.046 Sum_probs=87.3
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEE--EEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCcc
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAE--YIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGR 77 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~--~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~ 77 (151)
|..+..++.|+||+++||+++.|...+++|.+.---.+. ..+.+..+|..-++.+. +++... ...-++.++++++
T Consensus 1 M~~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~--~~~g~v~e~~p~~ 78 (152)
T 3eli_A 1 MADLRLEREFAVAPEALFAWVSDGAKLLQWWGPEGLHVPADQHDLDFTRLGPWFSVMVNGEGQRY--KVSGQVTHVKPPQ 78 (152)
T ss_dssp -CEEEEEEEESSCHHHHHHHTTCHHHHHHHCSSTTCBCCTTSBCCCCSSSEEEEEEEECTTCCEE--EEEEEEEEEETTT
T ss_pred CceEEEEEEECCCHHHHHHHHcCHHHHhhccCCCCcccccceeEEcccCCcEEEEEEECCCCCEE--EEEEEEEEEcCCC
Confidence 899999999999999999999999989898753111111 12345556665555543 223222 2566777778899
Q ss_pred EEEEEEEeCCCCC-ceeeEEEEEEEEecCCCCCCccEEEEEEE-EEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 78 SVTYLVVDGELKG-MYDPYRVTFSFTPVEGKQDEMCIAEWAAE-FEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 78 ~~~y~iieg~~~~-~~~~y~~t~~v~p~~~g~~~~s~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
+|.|+....+... .-.....++++.|.++ +|.++++-. |.. ...-+...+....++.+|++||-
T Consensus 79 ~l~~~~~~~~~~~~~~~~~~v~~~l~~~~~----gT~l~l~~~~~~~----~~~~~~~~~GW~~~L~~L~~~l~ 144 (152)
T 3eli_A 79 SVGFTWGWHDDDDRRGAESHVMFIVEPCAK----GARLILDHRELGD----DEMSLRHEEGWTSSLRKLAAELA 144 (152)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECCBC------CEEEEEEEESCSC----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeecCCCCCCCCcEEEEEEEEECCC----CEEEEEEEccCCC----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999876433221 1234567788888755 798887543 211 00112345566788888888873
No 43
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=99.00 E-value=3.9e-09 Score=75.13 Aligned_cols=94 Identities=22% Similarity=0.215 Sum_probs=71.4
Q ss_pred ccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEE
Q 031888 2 KKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
.+++.++.|+||+++||+++.|...+++|.|. . +++..+|..-.+.+ +++. +.-++.++++++++.|
T Consensus 5 ~~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~-~------~~~~~~Gg~~~~~~-~~g~-----~~~~v~e~~p~~~l~~ 71 (146)
T 1xn5_A 5 PDIKKEVRFNAPIEKVWEAVSTSEGLAFWFME-N------DLKAETGHHFHLQS-PFGP-----SPCQVTDVERPIKLSF 71 (146)
T ss_dssp CCEEEEEEESSCHHHHHHHTTSHHHHHTTSCC-B------CCCSCTTCEEEEEC-SSCE-----EEEEEEEEETTTEEEE
T ss_pred cEEEEEEEEcCCHHHHHHHHhChhHHHHhcCC-C------CCCccCCCEEEEEe-cCCc-----eEEEEEEEeCCcEEEE
Confidence 47899999999999999999999999999985 1 34445666656665 3332 5677777788999999
Q ss_pred EEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEE
Q 031888 82 LVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAE 119 (151)
Q Consensus 82 ~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~ 119 (151)
+... .....++++.|.++ +|.++++..
T Consensus 72 ~~~~-------~~~~~~~~l~~~~~----gT~l~~~~~ 98 (146)
T 1xn5_A 72 TWDT-------DGWSVTFHLKEEEN----GTIFTIVHS 98 (146)
T ss_dssp EETT-------TTEEEEEEEEECSS----SEEEEEEEE
T ss_pred EEeC-------CCEEEEEEEEEcCC----CEEEEEEEE
Confidence 8752 12567888999754 799998765
No 44
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=98.97 E-value=1.7e-08 Score=70.61 Aligned_cols=123 Identities=13% Similarity=0.126 Sum_probs=84.2
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
+++.++.|+||+++||+++.|...+++|.+. .+ +++..+|..-++.+.+... ...-++.++++++++.|+
T Consensus 2 ~i~~~~~i~ap~e~Vw~altd~~~~~~W~~~---~~---~~~~~~Gg~~~~~~~~~~~----~~~~~v~~~~p~~~l~~~ 71 (135)
T 3q6a_A 2 DIITKMQVDVPRETVFEAFVDPEKIGGFWFS---SS---SERWEQGKTITLRYEEYDA----ELNINIERVEDNQLIAFT 71 (135)
T ss_dssp CEEEEEEESSCHHHHHHHHHCTTTGGGTSSS---EE---SSCCCTTCEEEEECGGGTC-----CEEEEEEEETTTEEEEE
T ss_pred eEEEEEEeCCCHHHHHHHHcCHHHhcccCCC---CC---cccccCCCEEEEEEcCcCc----eEEEEEEEEcCCCEEEEE
Confidence 5889999999999999999999999999763 22 4565677666666643221 134456767889999998
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
..+| ..++++.|.++ +|.++++-..-+..+. ..-....+....++.+|.+||-
T Consensus 72 ~~~g---------~~~~~l~~~~~----gT~l~~~~~~~~~~~~-~~~~~~~~GW~~~l~~L~~~le 124 (135)
T 3q6a_A 72 WGAH---------PITIQFEESEA----GTVVTTTEKDFDTQDV-KQLLGQKEGWVYMLSCLKVYLE 124 (135)
T ss_dssp ETTE---------EEEEEEEEETT----EEEEEEEECCCCSSCH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCC---------eEEEEEEECCC----CEEEEEEEcCCCcchH-HHHhhchhCHHHHHHHHHHHHh
Confidence 7631 77889999754 8999887542221110 0011345566778888888874
No 45
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=98.97 E-value=1.3e-07 Score=68.61 Aligned_cols=135 Identities=12% Similarity=0.042 Sum_probs=89.5
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCccEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
.+..++.|+||+++||+++.|...+++|.+.---.+...+++..+|..-++.+. +++... .+.-++.+++++++|.|
T Consensus 14 ~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~--~~~g~v~e~~p~~rl~~ 91 (164)
T 3pu2_A 14 RLEFRRHFAATPEQLWAALTSPALLPAWLFARGWPMTECVFEPHKGGLIRQVWTGPEGRTR--GLTGRVILAEPPHRLIH 91 (164)
T ss_dssp EEEEEEEESSCHHHHHHHHHCTTTGGGTSCBTTBCEEEEEECCSTTCEEEEEEECGGGCEE--EEEEEEEEEETTTEEEE
T ss_pred eEEEEEEECCCHHHHHHHhcCHHHHhhEeCCCCeeeEEEEEeccCCCEEEEEEECCCCCEE--EEEEEEEEEcCCCEEEE
Confidence 678999999999999999999999999986321123333455556655444442 222222 25667777789999999
Q ss_pred EEEeCC--CCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChH-----HHHHHHHHHHHHHHhhhhc
Q 031888 82 LVVDGE--LKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPE-----KARDAALGFLKCFDKFQLS 150 (151)
Q Consensus 82 ~iieg~--~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~-----~~~~~~~~~~k~ie~~l~~ 150 (151)
+..-.+ .+ .....++++.|.++ +|.++++..|... .... ...+-...++.+|++||.+
T Consensus 92 t~~~~~~~~~---~~s~vt~~l~~~~~----gT~l~l~~~~~~~----~~~~~~~~~~~~~GW~~~L~~L~~~l~~ 156 (164)
T 3pu2_A 92 SELYDEDWTG---GETLVTLQLLPVEG----GTELAMAVDYATP----EARDAVAASAMATEMEEAYRHLDVMLAA 156 (164)
T ss_dssp EEBCC---CC---SCEEEEEEEEEETT----EEEEEEEEECSST----THHHHHHTSTHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCCC---CCEEEEEEEEEcCC----CEEEEEEEEeCCH----HHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 875221 22 23677889999865 7999998885321 1111 2245667888888888865
No 46
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=98.96 E-value=5.1e-08 Score=70.52 Aligned_cols=137 Identities=9% Similarity=-0.058 Sum_probs=90.9
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccc----cceEEEEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCcc
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEM----LAHAEYIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGR 77 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~----v~s~~~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~ 77 (151)
.+..++.|+||+++||+++.|...+++|.+.. +..+ +.|..+|..-++.+. +++... .+.-++.++++++
T Consensus 10 ~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~~~~g~~~~~~---~~d~~~Gg~~~~~~~~~~G~~~--~~~g~v~e~~p~~ 84 (162)
T 3q64_A 10 TFIIERLYPAPPSKVFFALGNADAKRRWFTDPDNPMPGRF---EMDFRVGGKEVNAGGPKDGPIH--VYTATYQDIVPDQ 84 (162)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHHHHSSCTTSCCGGGC---EECCSTTCEEEEEECCTTSCCE--EEEEEEEEEETTT
T ss_pred eEEEEEEeCCCHHHHHHHHCCHHHHhhcCCCCCCccceEE---EECCccCCEEEEEEECCCCCEE--EEEEEEEEEcCCC
Confidence 57888999999999999999999999998532 1112 234445555455543 233222 2567777778899
Q ss_pred EEEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 78 SVTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 78 ~~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
+|.|+..-.....+......++++.|.++ +|.++++-..-+... ....+...+-...++..|++||.
T Consensus 85 rl~~~~~~~~~~~~~~~s~v~~~l~~~~~----gT~lt~~~~~~~~~~-~~~~~~~~~GW~~~L~~L~~~le 151 (162)
T 3q64_A 85 RIVYSYDMLFGETRISVSLATIQLFAEGE----GTRLVLTEQGAFLDG-HDTPSTREHGTGVLLDLLDAFLD 151 (162)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEETT----EEEEEEEEEEEEETT-SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCCCCCCceEEEEEEEEcCC----CEEEEEEEEecCccc-hhHHHHHHHHHHHHHHHHHHHHh
Confidence 99998763110011344668889999865 799999988643221 11235556777888888888874
No 47
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=98.94 E-value=4.2e-08 Score=71.49 Aligned_cols=139 Identities=9% Similarity=-0.066 Sum_probs=89.4
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccc--cceEEEEcCCCCCCeEEEEEe-cCCCcceeeeEEEEEEEEeCccEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEM--LAHAEYIQGDGSPGSLRLFKL-GPAVHSYVKESIEKIEGVETGRSV 79 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~--v~s~~~~eGdg~~GsvR~~~~-~~g~~~~~~~~kErl~~~~~~~~~ 79 (151)
.+..++.|+||+++||+++.|...+.+|.+.. .. +...++|..+|..-++.+ .+++... .+.-++.+++++++|
T Consensus 10 ~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~~~~~~~-~~~~~~d~~~GG~~~~~~~~~~G~~~--~~~g~v~ev~p~~rl 86 (166)
T 3put_A 10 TFVIERRLTAPVARVFRAWSTPESKRQWFACHGEWV-PLEYALDFRPGGTERNYTADTDGLLH--AYDARYIDIVPDTRI 86 (166)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHHHHHTCC---C-CSEEEECCSTTCEEEEEEECTTSCEE--EEEEEEEEEETTTEE
T ss_pred eEEEEEEECCCHHHHHHHhCCHHHHHhcCCCCCCce-eeEEEeCcccCCEEEEEEECCCCCEE--EEEEEEEEEcCCcEE
Confidence 57889999999999999999999898887321 11 111234444554444443 2333222 256677777888999
Q ss_pred EEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 80 TYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 80 ~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
.|+..-..-..+...-..+++|.|.++ +|.++.+-..-+..+. .......+-...++..|++||-
T Consensus 87 v~t~~~~~~~~~~~~s~vt~~l~~~~~----gT~ltl~~~~~~~~~~-~~~~~~~~GW~~~L~~L~~~le 151 (166)
T 3put_A 87 IYAYEMKLGQTRISASLVTVAFDVEPS----GTRMVFTEQVVFLDGY-GDNGARLQGTEIGLDNLELFLV 151 (166)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEECSS----SEEEEEEEEEEEETTC-CCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCceEEEEEEEECCC----CEEEEEEEEecCccch-hhHHHHHHHHHHHHHHHHHHHh
Confidence 998753110011344567889999754 7999999876543321 1234556777888888988874
No 48
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=98.93 E-value=1.1e-07 Score=67.54 Aligned_cols=128 Identities=14% Similarity=0.199 Sum_probs=84.4
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCccccc-Ccc-ccceEEEEcCCCCCCeEEEEEec-CCCc-ceeeeEEEEEEEEeCccE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKI-NPE-MLAHAEYIQGDGSPGSLRLFKLG-PAVH-SYVKESIEKIEGVETGRS 78 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~-~P~-~v~s~~~~eGdg~~GsvR~~~~~-~g~~-~~~~~~kErl~~~~~~~~ 78 (151)
++..++.|+||+++||+++.|...+++| .+. -+ .+...++|..+|..-++.+. +++. .. .+.-++.+++++++
T Consensus 2 ~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~p~~~-~~~~~~~d~~~Gg~~~~~~~~~~G~~~~--~~~g~v~e~~p~~~ 78 (144)
T 2lgh_A 2 KISIEAHIEQEIEAVWWAWNDPDCIARWNAASSDW-HTTGSRVDLVVGGRFCHHMAAKDGSAGF--DFTGTFTRVEAPTR 78 (144)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTSSSCSTTE-EEEEEEECCSTTCEEEEEEEETTSSCEE--EEEEEEEEEETTTE
T ss_pred EEEEEEEeCCCHHHHHHHhCCHHHHhccCCCCCCc-ccceEEECCCCCCEEEEEEECCCCCceE--EeEEEEEEEeCCCE
Confidence 5788999999999999999999999999 642 12 12223445444544444433 2332 22 25566777789999
Q ss_pred EEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 79 VTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 79 ~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
|.|+.- | ....++++.|.++ +|.++.+..+. .. ..-+...+-...++.+|++||-
T Consensus 79 l~~~~~-~-------~~~~~~~l~~~~~----gT~l~~~~~~~--~~--~~~~~~~~Gw~~~L~~L~~~le 133 (144)
T 2lgh_A 79 LSFVMD-D-------GREVDVQFASEPG----GTWVQETFDAE--TS--HTPAQQQAGWQGILDNFKRYVE 133 (144)
T ss_dssp EEEEET-T-------CCEEEEEEEEETT----EEEEEEEEECC--TT--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEec-C-------CcEEEEEEEEcCC----CEEEEEEEECC--CH--HHHHHHHHHHHHHHHHHHHHHh
Confidence 999953 3 2567888999754 79888777652 11 1233445566778888888874
No 49
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=98.93 E-value=2.2e-08 Score=72.86 Aligned_cols=141 Identities=9% Similarity=0.062 Sum_probs=88.3
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCccEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
.+..++.|+||+++||+++.|...+++|.+.---.+...++|..+|..-++.+. +++... ...-++.+++++++|.|
T Consensus 13 ~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~g~~~--~~~~~v~e~~p~~rl~~ 90 (172)
T 2ldk_A 13 SFSIVAEFDADVKRVWAIWEDPRQLERWWGPPTWPATFETHEFTVGGKAAYYMTGPDGTKA--RGWWQFTTIEAPDHLEF 90 (172)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHHTTSSCTTSCEEEEEECCSTTCEEEEEEECTTSCEE--EEEEEEEEECSSSEEEE
T ss_pred eEEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCcccceEEEeecCCCEEEEEEECCCCCEE--eeEEEEEEEcCCCEEEE
Confidence 578899999999999999999998888864211122333455556655555443 233322 25667777788999999
Q ss_pred EEEeCC---CC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCC-CChHHHHHHHHHHHHHHHhhhh
Q 031888 82 LVVDGE---LK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTST-PAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 82 ~iieg~---~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
+....+ .+ ........++++.|.++ +|.++++..+.+..... .......+-...++.+|.+||-
T Consensus 91 ~~~~~~~~g~p~~~~~~~~v~~~l~~~~~----gT~lt~~~~~~~~~~~~~~~~~~~~~Gw~~~L~~L~~~le 159 (172)
T 2ldk_A 91 DDGFADEHGAPVDELGVTHATVKLEPLEN----RTRMTIISTFESEEQMQKMAEMGMEEGMREAIEQIDAVLS 159 (172)
T ss_dssp EEEEBCSSCCBCTTTCEEEEEEEEEEETT----EEEEEEEEEESCHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEeecCCCCCccCCCccEEEEEEEEEcCC----CEEEEEEEEcCCHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 886432 11 11235678899999754 89999998863210000 0000123455777888888774
No 50
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=98.90 E-value=4.7e-09 Score=75.61 Aligned_cols=129 Identities=12% Similarity=0.062 Sum_probs=84.7
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
+++.++.|+||+++||+++.|...+++|.|. ..+ ++..+|..-++.+. |... +..++.+++++++|.|+
T Consensus 10 ~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~-~~~-----~~~~~Gg~~~~~~~-g~~~----~~~~v~e~~p~~~l~~~ 78 (160)
T 2lak_A 10 VVRREAHLAAPPAAVFALMTDPEKILRWMGT-EAE-----VEPEPGGLYLVNVT-GARF----ARGSFREVVPVHRLAYS 78 (160)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHHHTSCS-SEE-----ESCSTTCCEEECSS-TTCC----SSCCEEEEETTTEEEEC
T ss_pred eEEEEEEeCCCHHHHHHHhcChHHHhhhCCC-cce-----eeccCCCEEEEEEe-CCce----EEEEEEEEcCCCEEEEE
Confidence 6889999999999999999999999999986 222 23334444445554 3321 44566767789999998
Q ss_pred EEeCCC-CCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 83 VVDGEL-KGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 83 iieg~~-~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
...++. ...-.....+++|.|.++ +|.++|+.+--+. ...-....+....++.+|.++|-
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~----gT~l~~~~~~~~~---~~~~~~~~~gw~~~L~~Lk~~le 139 (160)
T 2lak_A 79 FGWDGSEVVPPGSSLVEIDLIEQGG----GTLLRLTHSGLPS---AEQCAGHEEGWAHYLGRLTEVAA 139 (160)
T ss_dssp CCCCSSSCCCTTSCEEEEEEEECSS----SEEEEEEEECCCS---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCcEEEEEEEEECCC----CEEEEEEEeCCCC---HHHHHHHHHHHHHHHHHHHHHHh
Confidence 764432 001235778899999754 7999998762111 00112334455677788877764
No 51
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=98.85 E-value=1.2e-07 Score=69.38 Aligned_cols=137 Identities=8% Similarity=0.005 Sum_probs=86.0
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecC-CCcceeeeEEEEEEEEeCccEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGP-AVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~-g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
.+..++.|+||+++||+++.|...+++|.+.---.+...++|..+|..-++.+.. ++... ...-++.+++++++|.|
T Consensus 11 ~i~~~r~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~--~~~~~v~e~~p~~rl~~ 88 (178)
T 1xfs_A 11 DLMLKRELAVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVDLRPGGEFYTVMQDPEGNKF--PNSGCFLEVTDEKRLIW 88 (178)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEECCSTTCEEEEEEECTTCCEE--EEEEEEEEEETTTEEEE
T ss_pred eEEEEEEecCCHHHHHHHhCCHHHHhhCCCCCCeeeeEEEEeeECCcEEEEEEECCCCCEE--EEEEEEEEEeCCCEEEE
Confidence 5788999999999999999999999999743111223334565667666665532 33222 25667777788999999
Q ss_pred EEEeCC--CCCc-e-----e----eEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHH-----HHHHHHHHHHHH
Q 031888 82 LVVDGE--LKGM-Y-----D----PYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEK-----ARDAALGFLKCF 144 (151)
Q Consensus 82 ~iieg~--~~~~-~-----~----~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~-----~~~~~~~~~k~i 144 (151)
+..-++ .+.. + . ....++++.|.++ +|.++++..|.+.. ..+. ..+-...++.+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~----gT~l~~~~~~~~~~----~~~~~~~~~~~~Gw~~~l~~L 160 (178)
T 1xfs_A 89 TSALVKNYRPAVPATTSDKECAHIVMTAVIELQPTSS----GTRYTACAMHNTPG----QRKLHEEMGFHEGWGTTITQL 160 (178)
T ss_dssp ESSEEGGGEECCC-----------CCEEEEEEEECSS----SEEEEEEEECSSHH----HHHHHHTTTHHHHHHHHHHHH
T ss_pred EEEEcCCCCccccccccccccccccEEEEEEEEECCC----CEEEEEEEEcCCHH----HHHHHHhhhHHHHHHHHHHHH
Confidence 875221 1100 0 0 4678899999754 79999998852100 0111 134456667777
Q ss_pred Hhhhh
Q 031888 145 DKFQL 149 (151)
Q Consensus 145 e~~l~ 149 (151)
.+||-
T Consensus 161 ~~~le 165 (178)
T 1xfs_A 161 EELLK 165 (178)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77663
No 52
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=98.84 E-value=8.2e-08 Score=68.73 Aligned_cols=131 Identities=13% Similarity=0.034 Sum_probs=85.8
Q ss_pred ccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEE
Q 031888 2 KKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
..+..++.|+||+++||+++.|...+++|.|. + +++..+|..-.+....|+ .+.-++.+++++++|.|
T Consensus 9 ~~i~~~~~i~Ap~e~Vw~altdp~~~~~W~~~----~---~~~~~~Gg~~~~~~~~g~-----~~~g~v~e~~p~~~l~~ 76 (151)
T 3q63_A 9 RTVVVERQISHPPEKLWRALTQPHLIEEWLMK----N---DFKPAVGHRFNISADWGG-----VLDCEVLAVEPNKTLSY 76 (151)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCHHHHHHHSCE----E---CCCSSTTCEEEEECTTSC-----EEEEEEEEEETTTEEEE
T ss_pred CeEEEEEEeCCCHHHHHHHHcCHHHHHhhcCc----C---CCccCCCCEEEEECCCCC-----EEEEEEEEEeCCCEEEE
Confidence 46889999999999999999999999999973 2 344456655455422232 25667777788999999
Q ss_pred EEEeCCC-CCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 82 LVVDGEL-KGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 82 ~iieg~~-~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
+...++. +..-..-..++++.|.++ +|.++++-..-+... ...-....+-...++..|++||-
T Consensus 77 ~~~~~~~~~~~~~~s~v~~~l~~~~~----gT~l~l~~~g~~~~~-~~~~~~~~~GW~~~L~~L~~~le 140 (151)
T 3q63_A 77 TWNLAHQDPAFDLRSVVTFTLTPTPT----GTHLRMEQSGFRPDQ-RRAYGGAKMGWPQFFEKLEQLLD 140 (151)
T ss_dssp ECBBCCSSTTTCBCCEEEEEEEECSS----SEEEEEEEECCCTTC-HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCCCCCCCCCCeEEEEEEEEcCC----CEEEEEEEeCCCcch-HHHHHhhhhCHHHHHHHHHHHHh
Confidence 8875431 111123456788899765 799988865322111 00011234555778888888874
No 53
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=98.81 E-value=7.3e-09 Score=74.22 Aligned_cols=123 Identities=15% Similarity=0.083 Sum_probs=80.1
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
+++.++.|+||+++||+++.|...+++|.|. . +++..+|....+.+. ++. +.-++.++++++++.|+
T Consensus 11 ~i~~~~~i~Ap~e~Vw~altd~~~~~~W~~~-~------~~~~~~Gg~~~~~~~-~g~-----~~~~v~e~~p~~~l~~~ 77 (152)
T 2kew_A 11 DITKSITLEAPIQKVWETVSTSEGIAKWFMP-N------DFQLKEGQEFHLQSP-FGP-----SPCKVLAVQAPTELSFE 77 (152)
T ss_dssp CEEEEEEECSCHHHHHHHSSSSHHHHHHHCS-C------CCCSCSSCCBCSSSS-CCS-----CCBEEEEEETTTEEEEE
T ss_pred EEEEEEEECCCHHHHHHHHhCHHHHHHhcCC-C------CCCCCCCCEEEEEec-CCc-----eEEEEEEEeCCcEEEEE
Confidence 6899999999999999999999999999875 1 344445554444442 232 34566767888999998
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEE-EEeCCCCCCC-----h---HHHHHHHHHHH-HHHHhhhh
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAE-FEPLTTSTPA-----P---EKARDAALGFL-KCFDKFQL 149 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~-~~~~~~~~~~-----~---~~~~~~~~~~~-k~ie~~l~ 149 (151)
...+ ....++++.|.++ +|.++++-. |....+..+. . +...+....++ .+|.+||-
T Consensus 78 ~~~~-------~~~~~~~l~~~~~----gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GW~~~l~~~L~~~le 143 (152)
T 2kew_A 78 WDTE-------GWVVTFQLEDLGE----KTGFTLIHSGWKEPNQVIGKANEKSSVVRGKMDGGWTGIVNERLRKAVE 143 (152)
T ss_dssp CTTS-------CCEEEEEEECCSS----CEEEEEEECCSSCCSBCSSSSSSBHHHHHHHHHHHHHHHTTTHHHHHHT
T ss_pred EccC-------CEEEEEEEEECCC----CEEEEEEEEeccCcccccccccchhHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 6543 3567788888755 798887754 3211001110 1 12244456667 77777663
No 54
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=98.79 E-value=2.7e-07 Score=67.38 Aligned_cols=137 Identities=17% Similarity=0.251 Sum_probs=86.6
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccC-ccccceEEEEcCCCCCCeEEEEEe-cCCCcceeeeEEEEEEEEeCccEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKIN-PEMLAHAEYIQGDGSPGSLRLFKL-GPAVHSYVKESIEKIEGVETGRSVT 80 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~-P~~v~s~~~~eGdg~~GsvR~~~~-~~g~~~~~~~~kErl~~~~~~~~~~ 80 (151)
.+..++.|+||+++||+++.|...+.+|. |.-. .+...+.|..+|..-++.+ .+++... .+.-++.+++++++|.
T Consensus 14 ~i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~p~~~-~~~~~~~d~r~GG~~~~~~~~~~G~~~--~~~g~~~ev~p~~rlv 90 (168)
T 3uid_A 14 TLTITAEFAAPVTRIWQIYADPRQLEKVWGPPSH-PATVVDHDLRPGGRVTYFMTGPDGEKY--AGYWEITAVDEPHSFS 90 (168)
T ss_dssp EEEEEEEESSCHHHHHHHHHSHHHHHHHHCCTTS-CCEEEEECCSTTCEEEEEEECTTSCEE--EEEEEEEEEETTTEEE
T ss_pred EEEEEEEEcCCHHHHHHHhCCHHHHhhEeCCCCe-eeeEEEEcccCCcEEEEEEECCCCCEE--eeEEEEEEEeCCcEEE
Confidence 47889999999999999999998888885 4312 2233345544554434443 2333222 2566777778889999
Q ss_pred EEEEe----CCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChH-----HHHHHHHHHHHHHHhhhhc
Q 031888 81 YLVVD----GELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPE-----KARDAALGFLKCFDKFQLS 150 (151)
Q Consensus 81 y~iie----g~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~-----~~~~~~~~~~k~ie~~l~~ 150 (151)
|+..- |.+......-..++++.|.++ +|.++++..|... ..-. ...+-...++.+|++||.+
T Consensus 91 ~t~~~~~~~g~p~~~~~~s~vt~~l~~~~~----gT~lt~~~~~~~~----~~~~~~~~~g~~~GW~~~L~~L~~~l~~ 161 (168)
T 3uid_A 91 FLDGFADEDFNPNTDLPVSTNVYTFTEHDG----GTRATYVGTYASA----EALQQVLDMGVIEGASSAINQIDALLTA 161 (168)
T ss_dssp EEEEEECTTSCBCSSCCCEEEEEEEEEETT----EEEEEEEEECSCH----HHHHHHHHTTHHHHHHHHHHHHHHHTCS
T ss_pred EEEeeccCCCCcCCCCCcEEEEEEEEECCC----CEEEEEEEecCCH----HHHHHHHHhcHHHHHHHHHHHHHHHHHh
Confidence 98742 222111224678899999854 8999998643111 0111 1245567889999998864
No 55
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=98.79 E-value=5.5e-07 Score=65.82 Aligned_cols=134 Identities=10% Similarity=0.042 Sum_probs=85.6
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCccEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
.+..++.|+||+++||+++.|...+++|.+.---.+...++|..+|..-++.+. +++... ...-++.+++++++|.|
T Consensus 17 ~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~--~~~g~v~e~~p~~rl~~ 94 (175)
T 2lf2_A 17 TITIKREFAAVRAIVWEAFTRAEILDQWWAPKPWKAKTKSMDFKEGGTWLYAMVGPNGEEH--WSICEYAIIKPIERFTG 94 (175)
T ss_dssp EEEEEEEESSCHHHHHHHHTCHHHHHHSSSSSSSEEEEEEECCSTTCEEEEEEECSSSCEE--EEEEEECCCCSSSEEEE
T ss_pred eEEEEEEEcCCHHHHHHHhCCHHHHhhCcCCCCccceEEEEeccCCCEEEEEEECCCCCEE--EeEEEEEEEcCCCEEEE
Confidence 578899999999999999999999989964211122333455555554444443 333322 25566776688899999
Q ss_pred EEEeCC---CC-CceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHH--------HHHHHHHHHHHHHhhhh
Q 031888 82 LVVDGE---LK-GMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEK--------ARDAALGFLKCFDKFQL 149 (151)
Q Consensus 82 ~iieg~---~~-~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~--------~~~~~~~~~k~ie~~l~ 149 (151)
+.--++ .+ ........++++.|.++ +|.++.+..|. +++. ..+-...++.+|++||-
T Consensus 95 t~~~~~~~g~p~~~~~~~~v~~~l~~~~~----gT~l~~~~~~~-------~~~~~~~~~~~~~~~Gw~~~L~~L~~~le 163 (175)
T 2lf2_A 95 KDGFTDASGKLNTEMPRSNWDMRFIDKGE----ITEVQYHISYD-------DVAQLEATIQMGFKEGITMAMENLDELLV 163 (175)
T ss_dssp EEEEESSTTCCCTTSCCEEEEEEEEEETT----EEEEEEEEECS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCcCCCCCcEEEEEEEEECCC----CEEEEEEEecC-------CHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 875322 11 11235678899999754 79988887641 2221 13445677888888764
No 56
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=98.79 E-value=1.6e-07 Score=69.70 Aligned_cols=120 Identities=10% Similarity=0.081 Sum_probs=81.9
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
+++.++.|+||+++||+++.|...+++|.|. ....++ .+|..-++.+.+ . ...-++.++++++++.|+
T Consensus 37 ~i~~~~~i~Ap~e~VW~altdp~~l~~W~~~-~~~~d~-----~~Gg~~~~~~~~-~-----~~~~~v~e~~p~~rl~~~ 104 (184)
T 2nn5_A 37 YFGTERAISASPQTIWRYLTETDKLKQWFPE-LEIGEL-----GVNGFWRFILPD-F-----EETMPFTDYAEEKYLGVT 104 (184)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHHHHCTT-EEEEEC-----STTCEEEEEETT-E-----EEEEEEEEEETTTEEEEE
T ss_pred EEEEEEEeCCCHHHHHHHHcCHHHHHHhCCC-cccccc-----CCCCEEEEEEeC-C-----CceEEEEEecCCCEEEEE
Confidence 4788999999999999999999999999985 222222 334444455533 1 245677777888889888
Q ss_pred EEeCCCCCceeeEEEEEEEEe-cCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 83 VVDGELKGMYDPYRVTFSFTP-VEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p-~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
.- + ...++++.| .++ +|.++++-.|...... ...........++.+|.++|-
T Consensus 105 ~~-~--------~~v~~~l~~~~~~----gT~l~~~~~~~~g~~~--~~~~~~~GW~~~L~~Lk~~le 157 (184)
T 2nn5_A 105 WD-T--------GIIYFDLKEQAPH----QTLLVFSESLPENFTT--PRHKDIAGWSIVLNRLKQVVE 157 (184)
T ss_dssp ET-T--------EEEEEEEEEEETT----EEEEEEEEEECTTCSS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred Ec-C--------eEEEEEEEECCCC----CEEEEEEEeccCCccc--hhhHHHHHHHHHHHHHHHHHh
Confidence 73 1 567888999 644 8999999555432222 123345566778888888774
No 57
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=98.70 E-value=1.4e-07 Score=68.23 Aligned_cols=137 Identities=16% Similarity=0.203 Sum_probs=86.6
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEec-CCCcceeeeEEEEEEEEeCccEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLG-PAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~-~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
.+..++.|+||+++||+++.|...+++|.+.---.+...++|..+|..-++.+. +++.. ++.-++.+++++++|.|
T Consensus 9 ~i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~---~~~g~v~e~~p~~rl~~ 85 (164)
T 2l9p_A 9 KIIFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNATKGGSAFYAIQAPQMIS---YTIAEYLQVDAPYYIEY 85 (164)
T ss_dssp EEEECCEESSCHHHHHHHHHCHHHHTTTCCCTTCEEEEEECCCSTTEEEEEEEEETTEEE---EEEEEESCCBTTTEEEE
T ss_pred eEEEEEEeCCCHHHHHHHhCCHHHHHhccCCCCceeeEEEEeccCCCEEEEEEECCCCCE---EEEEEEEEEcCCCEEEE
Confidence 578889999999999999999999988864211123344566666665444443 23321 23455565588999999
Q ss_pred EEEeCC---CCC-ceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHH-----HHHHHHHHHHHHHhhhhc
Q 031888 82 LVVDGE---LKG-MYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEK-----ARDAALGFLKCFDKFQLS 150 (151)
Q Consensus 82 ~iieg~---~~~-~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~-----~~~~~~~~~k~ie~~l~~ 150 (151)
+...++ .+. .......++++.|.++ +|.++.+..|.+. ..-+. ..+-...++.+|++||-+
T Consensus 86 t~~~~~~~g~p~~~~~~~~v~~~l~~~~~----gT~l~~~~~~~~~----~~~~~~~~~~~~~Gw~~~L~~L~~~le~ 155 (164)
T 2l9p_A 86 LDYFATSKGEKDTSMPGMHITLNFEEVKG----KTTVTSTSTFPTE----SAAQQAIDMGVETGMNSTLNQLEKLLNQ 155 (164)
T ss_dssp EEEEEBTTBSCCSSSCCEEEEEEECCCSS----SEEEEEEEECSST----THHHHHHHHTHHHHHHHHHHHHHHHHHS
T ss_pred EEEecCCCCCccCCCCceEEEEEEEECCC----CEEEEEEEEcCCH----HHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 876432 111 1234677888988744 7998888764321 11111 244557788888888753
No 58
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=98.69 E-value=3.4e-07 Score=66.58 Aligned_cols=97 Identities=11% Similarity=0.045 Sum_probs=59.5
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCc---c
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETG---R 77 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~---~ 77 (151)
|...+.+++|++|+++||+.+.|+.+||.|+|+ ++++ +.+.+ +-+..+..+.++ ++=+.+ .++ -
T Consensus 26 m~~~~~si~I~ap~eeVy~~~~D~e~lP~W~~~-l~~~-~~~~~----~~w~a~~~p~G~-----v~v~~~--~~~~~gv 92 (156)
T 2qpv_A 26 MQSRIIHLSVEKPWAEVYDFAANPGNMPRWAAG-LAGG-LEADG----EDWIAKGGPLGE-----VRVNFA--PHNEFGV 92 (156)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHCGGGGGGTCGG-GTTC-CEEET----TEEEEECSSSCE-----EEEEEC--CCCSSCB
T ss_pred ccceEEEEEEcCCHHHHHHHHHChhhHHHHHHh-hhhh-cccCC----CcEEEeccCCCc-----EEEEEe--cCCCceE
Confidence 567899999999999999999999999999998 6554 22211 122222122222 221111 222 2
Q ss_pred EEEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEE
Q 031888 78 SVTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAE 119 (151)
Q Consensus 78 ~~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~ 119 (151)
...+..+.++. .-.+.+++.|.++ ||.|+|++.
T Consensus 93 ~d~~~~l~~g~-----~~~~~~rv~p~g~----GTeV~~tl~ 125 (156)
T 2qpv_A 93 IDHVVTLPDGL-----KVYNALRVTPNGS----GTEVSFTLL 125 (156)
T ss_dssp CCEEEECTTSC-----EEEEEEEEEEETT----EEEEEEEEE
T ss_pred EEEEEecCCCc-----EEEEEEEEEeCCC----CEEEEEEEe
Confidence 22444444331 1334678888755 799999984
No 59
>2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5
Probab=98.65 E-value=1.6e-07 Score=69.92 Aligned_cols=128 Identities=12% Similarity=0.094 Sum_probs=83.8
Q ss_pred ccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCC--------------cceeeeEE
Q 031888 2 KKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAV--------------HSYVKESI 67 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~--------------~~~~~~~k 67 (151)
.+++.++.|+||+++||+++.|...+++|.+.. +.+..+|..-++.+...+ ... .+.
T Consensus 19 ~~i~~~~~i~Ap~e~Vw~altdpe~~~~W~~~~-------~~d~~~Gg~~~~~~~~~~~~~~~~p~~~~~~g~~~--~~~ 89 (191)
T 2k5g_A 19 QSIRFERLLPGPIERVWAWLADADKRARWLAGG-------ELPRQPGQTFELHFNHAALTAETAPARYAQYDRPI--VAR 89 (191)
T ss_dssp SSEEEEEEESSSSHHHHHHHHCHHHHTTTSCCC-------CCCSSTTCEEEEEECGGGSCCSSCCSSCSGGGSCE--EEE
T ss_pred CeEEEEEEeCCCHHHHHHHHcCHHHHhhcCCCC-------CCCccCCCEEEEEEcCCccccccCcccccccCCCc--eeE
Confidence 368899999999999999999999999999851 344456766666664310 111 256
Q ss_pred EEEEEEeCccEEEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEE-EEeCCCCCCChHHHHHHHHHHHHHHHh
Q 031888 68 EKIEGVETGRSVTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAE-FEPLTTSTPAPEKARDAALGFLKCFDK 146 (151)
Q Consensus 68 Erl~~~~~~~~~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~k~ie~ 146 (151)
-++.+++++++|.|+...++.. .....++++.|.++ +|.++.+-+ |. + ...-.....-...++.+|.+
T Consensus 90 g~v~e~~pp~rl~~~~~~~~~~---~~~~v~~~l~~~~~----gT~l~~~~~~~~---~-~~~~~~~~~GW~~~L~~L~~ 158 (191)
T 2k5g_A 90 HTLLRCEPPRVLALTWGGGAGE---APSEVLFELSEAGE----QVRLVLTHTRLA---D-RAAMLDVAGGWHAHLAVLAG 158 (191)
T ss_dssp EEEEEEETTTEEEEECCCCSSS---SCCEEEEEEEECSS----SEEEEEEEECCC---S-HHHHHHHTTTTTTHHHHHHH
T ss_pred EEEEEecCCCEEEEEeecCCCC---CCEEEEEEEEEcCC----CEEEEEEEecCC---C-HHHHHHHHHhHHHHHHHHHH
Confidence 6777778999999987654421 23567888888755 798887766 32 1 00011112223566677776
Q ss_pred hhh
Q 031888 147 FQL 149 (151)
Q Consensus 147 ~l~ 149 (151)
+|-
T Consensus 159 ~le 161 (191)
T 2k5g_A 159 KLA 161 (191)
T ss_dssp HHH
T ss_pred HHC
Confidence 663
No 60
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=98.53 E-value=5.5e-06 Score=59.94 Aligned_cols=130 Identities=14% Similarity=0.149 Sum_probs=81.5
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
.+..++.|+||+++||+++.|...+.+|.++.. +++ |..+|.. +.+..|. +.=++.+++++++|.|+
T Consensus 20 ~i~~~r~~~ap~e~Vw~A~Tdpe~l~~W~~g~~--~~~---d~~~GG~--~~~~~G~------~~g~v~ev~p~~rlv~t 86 (158)
T 3ni8_A 20 SFEITEEYYVPPEVLFNAFTDAYTLTRLSRGSL--AEV---DLKVGGK--FSLFSGS------ILGEFTEITKPHKIVEK 86 (158)
T ss_dssp CEEEEEEESSCHHHHHHHHHCHHHHHHHTTTSC--CEE---CCSTTCE--EEETTTT------EEEEEEEEETTTEEEEE
T ss_pred eEEEEEEECCCHHHHHHHhcCHHHHHhhcCCCc--cEE---EccCCCE--EEEecCC------EEEEEEEEeCCcEEEEE
Confidence 678899999999999999999998999997312 222 2233333 2233442 34455666788889887
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCC-CCC--hHHHHHHHHH-HHHHHHhhhh
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTS-TPA--PEKARDAALG-FLKCFDKFQL 149 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~-~~~--~~~~~~~~~~-~~k~ie~~l~ 149 (151)
---.+.+.. ..-..++++.|.+++ +|.++.+-+--+.... ... .+...+-... ++..|.+||-
T Consensus 87 w~~~~~~~~-~~s~vt~~l~~~~~~---~T~ltl~~~g~~~~~~~~~~~~~~~~~~GW~~~~L~~Lk~~Le 153 (158)
T 3ni8_A 87 WKFRDWNEC-DYSTVTVEFISVKEN---HTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILG 153 (158)
T ss_dssp EEETTSCSS-CCEEEEEEEEEEETT---EEEEEEEEECCCSSCTTCCCCHHHHHHHHHHHTHHHHHHHTSC
T ss_pred EEecCCCCC-CcEEEEEEEEecCCC---CEEEEEEEEccCchhhhccchhHHHHHhChhHHHHHHHHHHhC
Confidence 654332211 124678888885443 8988877653333221 111 3344556677 6899999873
No 61
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=98.47 E-value=4.3e-05 Score=56.03 Aligned_cols=139 Identities=13% Similarity=0.179 Sum_probs=86.7
Q ss_pred ccEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceee-eEEEEEEEEeCccEEE
Q 031888 2 KKMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVK-ESIEKIEGVETGRSVT 80 (151)
Q Consensus 2 ~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~-~~kErl~~~~~~~~~~ 80 (151)
..+..+..|++||+++|+++.|....++|.|. +.++++++-+++ -.+-.+.+...-+...| ++-.+-...+.+.++.
T Consensus 27 ~~~k~~~~v~~s~~~v~~~l~D~~~~~~W~~~-~~~~~vle~~~~-~~i~y~~~~~p~p~~~RD~v~~~~~~~~~~g~~~ 104 (189)
T 3qsz_A 27 REFRGEVRLKAAADDVVKVLRDANAFRQWMPD-VAASELLKATDT-EQYHYLDNSAPWPVSNRDGVYHFTYEKAGDGAIT 104 (189)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCGGGGGGTSTT-EEEEEEEEECSS-EEEEEEEECCSSSCCCEEEEEEEEEEECTTSCEE
T ss_pred EEEEEEEEEECCHHHHHHHHHhHHHhhhHHHh-cCEEEEEeecCC-ceEEEEEeecCCCcCCcceEEEEEEEECCCCeEE
Confidence 35778889999999999999999989999997 777788765332 23334444322111111 2222211112233444
Q ss_pred EEEEeCC--CC---C--ceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH-----HHHHHHHHHHHHhhh
Q 031888 81 YLVVDGE--LK---G--MYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA-----RDAALGFLKCFDKFQ 148 (151)
Q Consensus 81 y~iieg~--~~---~--~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~-----~~~~~~~~k~ie~~l 148 (151)
..+.... .+ . ....+.+.+.+.| +++ +|.|++.+..+|.+.. |..+ .+....++++|.+++
T Consensus 105 i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~~---~t~vt~~~~~dp~G~i---P~~lvn~~~~~~~~~~l~~L~k~~ 177 (189)
T 3qsz_A 105 VRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DAD---GVDVTYQMHASPGGSI---PSWLANQTVVETPFGTLKALRSHL 177 (189)
T ss_dssp EEEEECTTSSCCCTTSEECCCEEEEEEEEE-CSS---SEEEEEEEEECSCSSS---CHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred EEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CCC---eEEEEEEEEeCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4443322 11 1 1577889999999 664 8999999999998653 2322 445566777776665
Q ss_pred h
Q 031888 149 L 149 (151)
Q Consensus 149 ~ 149 (151)
.
T Consensus 178 ~ 178 (189)
T 3qsz_A 178 R 178 (189)
T ss_dssp T
T ss_pred h
Confidence 4
No 62
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=98.44 E-value=6e-07 Score=63.44 Aligned_cols=124 Identities=10% Similarity=0.078 Sum_probs=78.1
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
.++.++.|+||+++||+++.|...+++|.+.. .. .|..+|.. +.+.+|. +.=++.+++++++|.|+
T Consensus 12 ~i~~~~~i~ap~e~Vw~altdp~~~~~W~~~~-~~-----~d~~~Gg~--~~~~~G~------~~g~v~e~~p~~~l~~~ 77 (145)
T 1x53_A 12 KITLKETFLTSPEELYRVFTTQELVQAFTHAP-AT-----LEADRGGK--FHMVDGN------VSGEFTDLVPEKHIVMK 77 (145)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHHHHHHHSCSC-CB-----CCCSTTCC--CBBTTTT------EECCEEEEETTTEEEEE
T ss_pred EEEEEEEECCCHHHHHHHhCCHHHHHHhcCCC-ce-----EECCCCCE--EEEECCe------eEEEEEEEeCCCEEEEE
Confidence 57888999999999999999999999998642 22 23223332 2333442 22344555789999988
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHH-HHHHHHhhhh
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALG-FLKCFDKFQL 149 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~k~ie~~l~ 149 (151)
--..+.+.. .....++++.|.++ +|.++++-..-+... .+...+-... ++.+|.+||-
T Consensus 78 ~~~~~~~~~-~~~~v~~~l~~~~~----gT~l~~~~~~~~~~~----~~~~~~Gw~~~~l~~L~~~le 136 (145)
T 1x53_A 78 WRFKSWPEG-HFATITLTFIDKNG----ETELCMEGRGIPAPE----EERTRQGWQRYYFEGIKQTFG 136 (145)
T ss_dssp EEETTSCTT-CCEEEEEECCBCSS----CEEEEEEEEEEEHHH----HHHHHHTTHHHHHHHHHHHTC
T ss_pred EecCCCCCC-CcEEEEEEEEECCC----CEEEEEEEECCCHHH----HHHHHhchhHHHHHHHHHHHh
Confidence 765543211 12456788888644 799998854333211 2333444465 6888888763
No 63
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=98.39 E-value=1.5e-06 Score=73.31 Aligned_cols=109 Identities=14% Similarity=0.261 Sum_probs=88.3
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCC--CCCeEEEEEecCCCcceeeeEEEEE--EEEeCccE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDG--SPGSLRLFKLGPAVHSYVKESIEKI--EGVETGRS 78 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg--~~GsvR~~~~~~g~~~~~~~~kErl--~~~~~~~~ 78 (151)
+++.+..|++|++.||+.+++..++++|.|. ...++++.+.+ .+|++- +.+..+ . .+.-++ +++++.+.
T Consensus 2 ~~~~~~~i~~p~~~v~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~G~~~-~~~~~~-~----~w~~~~~~t~~~~~~~ 74 (516)
T 3oh8_A 2 SLTTSHFIPFPREMVWDWHTRKGAVARLTPP-FIPLNPITQAERLADGTTI-FSLPAG-L----KWVARHDLSGFLNGSR 74 (516)
T ss_dssp CEEEEEEESSCHHHHHHHHHSTTHHHHHSCT-TSSCEECSCCSCSSSCEEE-EECSTT-C----EEEEEECGGGCBTTTE
T ss_pred eEEEEEEccCCHHHHHHHhcCcchHHHhCCC-CCceEEecCCCCCcCCeEE-EecCCC-c----EEEEEEccccccCCCe
Confidence 4788999999999999999999999999997 66778875443 788887 877543 2 366777 76689999
Q ss_pred EEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeC
Q 031888 79 VTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPL 123 (151)
Q Consensus 79 ~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~ 123 (151)
+...+..|++.. |.++.-+..|.+.++ ||.++.+++|...
T Consensus 75 F~d~~~~gp~~~-~~~w~h~h~f~~~~~----gt~~~d~~~~~~p 114 (516)
T 3oh8_A 75 FTDVCLTAPVKA-LANWRHVHNFVDQDG----GTLITDSVSTRLP 114 (516)
T ss_dssp EEEECCSCSSGG-GSSCEEEEEEEEETT----EEEEEEEEECSSC
T ss_pred EEEEeccCcccc-eeeeEEEEEEEEcCC----CcEEEEEEEeeCc
Confidence 999999988532 677888888998765 7999999999855
No 64
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=98.39 E-value=1.5e-06 Score=64.58 Aligned_cols=118 Identities=14% Similarity=0.048 Sum_probs=80.0
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
.+..++.|++|+++||+++.|...+++|.+. . ++|..+|..-++.+.. .-++.+++++++|.|+
T Consensus 22 ~i~~~r~i~Appe~Vw~alTdpe~l~~W~~p-~------~~d~~~Gg~~~~~~~~---------~g~v~e~~pp~rl~~t 85 (181)
T 4fpw_A 22 SIIIRQRYDAPVDEVWSACTDPNRINRWFIE-P------KGDLREGGNFALQGNA---------SGDILRCEPPRRLTIS 85 (181)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHHHHSCC-E------ESCCSTTCEEEESSSC---------EEECCEEETTTEEEEE
T ss_pred eEEEEEEECCCHHHHHHHHcChHHHhhccCC-C------ccCCCCCCEEEEEecC---------CEEEEEEcCCcEEEEE
Confidence 5678899999999999999999999999864 1 2454555543443321 1234445799999999
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhh
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQ 148 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l 148 (151)
...++. .....+++|.|.++ +|.++++-...+. ..-....+-...++..|.+||
T Consensus 86 w~~~~~----~~s~vt~~l~~~~~----gT~Ltl~~~~~~~----e~~~~~~~GW~~~L~~L~~~L 139 (181)
T 4fpw_A 86 WVYEGK----PDSEVELRLSEEGD----GTLLELEHATTSE----QMLVEVGVGWEMALDFLGMFI 139 (181)
T ss_dssp EBCTTS----CCEEEEEEEEEETT----EEEEEEEEEESCH----HHHHHHHHHHHHHHHHHHHHC
T ss_pred EEcCCC----CcEEEEEEEEECCC----cEEEEEEEEcCCH----HHHHHHHHhHHHHHHHHHHHh
Confidence 875542 13568889999654 8999887665321 011233455577888888887
No 65
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=98.18 E-value=2.9e-05 Score=58.09 Aligned_cols=119 Identities=13% Similarity=0.052 Sum_probs=77.3
Q ss_pred cEEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEEE
Q 031888 3 KMKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTYL 82 (151)
Q Consensus 3 ~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y~ 82 (151)
.+..+..+++|+++||+++.|...+.+|++. + ++|..+|..-.+.+ . ..-++.+++++++|.|+
T Consensus 33 ~l~i~R~f~Ap~e~VW~AlTdpe~l~~W~~~----~---~~d~r~GG~~~~~~---~------~~g~v~ev~pp~rL~~t 96 (192)
T 2luz_A 33 SIIIRQRYDAPVDEVWSACTDPNRINRWFIE----P---KGDLREGGNFALQG---N------ASGDILRCEPPRRLTIS 96 (192)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHHHTTTSCC----E---EECCSTTSEEEETT---S------EEEEEEEEETTTEEEEE
T ss_pred EEEEEEEeCCCHHHHHHHHcCHHHHheeeCC----C---cccCccCcEEEeec---c------ccceEEEEecCeeEEEE
Confidence 4678889999999999999999999999864 2 23444444333321 1 22345556789999998
Q ss_pred EEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhhh
Q 031888 83 VVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQL 149 (151)
Q Consensus 83 iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l~ 149 (151)
--..+.. .-..++++.|.++ ||.++.+=...+ + ........-...+|..|+.||-
T Consensus 97 w~~~~~~----~~~vt~~L~~~g~----gT~Ltl~h~~~~--~--~~~~~~~~GW~~~Ld~L~~~L~ 151 (192)
T 2luz_A 97 WVYEGKP----DSEVELRLSEEGD----GTLLELEHATTS--E--QMLVEVGVGWEMALDFLGMFIR 151 (192)
T ss_dssp EEESSSC----EEEEEEEEEEETT----EEEEEEEEEESC--H--HHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCC----CceEEEEEEEcCC----cEEEEEEEECCC--H--HHHHHHhccHHHHHHHHHHHhC
Confidence 7554422 2356888999866 798877654321 0 0122333445778888888874
No 66
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=98.10 E-value=0.00018 Score=53.59 Aligned_cols=142 Identities=13% Similarity=0.110 Sum_probs=87.6
Q ss_pred cEEEEEEEc-CCHHHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceee-eEEEE-EEEEe-CccE
Q 031888 3 KMKGQVVLN-LPAEKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVK-ESIEK-IEGVE-TGRS 78 (151)
Q Consensus 3 ~~~~~~~i~-a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~-~~kEr-l~~~~-~~~~ 78 (151)
.+..+..|+ +++++|++++.|....++|.|. +.++++++-+| ..|-++.+....+...| ++-.+ ...++ ....
T Consensus 53 ~~k~~~~i~~~~~~~v~~~l~d~~~r~~Wd~~-~~~~~vle~~~--~~i~~~~~~~p~p~~~RD~v~~~~~~~~~~~g~~ 129 (214)
T 1ln1_A 53 EYKVFGVLEDCSPTLLADIYMDSDYRKQWDQY-VKELYEQECNG--ETVVYWEVKYPFPMSNRDYVYLRQRRDLDMEGRK 129 (214)
T ss_dssp EEEEEEEETTSCHHHHHHHHHCHHHHHHHCTT-EEEEEEEEETT--EEEEEEEECCCTTSCCEEEEEEEEEEEECSTTCC
T ss_pred EEEEEEEECCCCHHHHHHHHcCHHHHHHHHHH-HhhEEEeccCC--CEEEEEEEEcCCCCCCceEEEEEEEEecccCCCe
Confidence 456788895 9999999999998777999997 77778776654 45666666532221111 23222 12232 3332
Q ss_pred EEEE---EEeCC-CC---Cc--eeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChH---HHHHHHHHHHHHHHh
Q 031888 79 VTYL---VVDGE-LK---GM--YDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPE---KARDAALGFLKCFDK 146 (151)
Q Consensus 79 ~~y~---iieg~-~~---~~--~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~---~~~~~~~~~~k~ie~ 146 (151)
+.+- -++-+ .+ .. ...+.+.+.+.|.+++ +|.+++....+|.+. .|... ........++++|.+
T Consensus 130 ~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~---~t~v~~~~~~Dp~G~-iP~~l~n~~~~~~~~~~l~~l~k 205 (214)
T 1ln1_A 130 IHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKK---GSKVFMYYFDNPGGQ-IPSWLINWAAKNGVPNFLKDMAR 205 (214)
T ss_dssp EEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSS---SEEEEEEEEECCSSC-CCHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCC---ceEEEEEEEECCCCc-ccHHHHHHHHHHHhHHHHHHHHH
Confidence 2221 12211 11 11 4668888999998764 899999999999954 22111 124445677788877
Q ss_pred hhhcC
Q 031888 147 FQLSY 151 (151)
Q Consensus 147 ~l~~~ 151 (151)
++..|
T Consensus 206 ~~~~y 210 (214)
T 1ln1_A 206 ACQNY 210 (214)
T ss_dssp HHHTC
T ss_pred HHHhc
Confidence 77654
No 67
>1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A 2l65_A*
Probab=98.01 E-value=4.9e-05 Score=54.38 Aligned_cols=134 Identities=11% Similarity=0.024 Sum_probs=76.3
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCcccccCcccc------ceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEe
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEIISKINPEML------AHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVE 74 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v------~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~ 74 (151)
|..+..++.|+||+++||+++.| .+.+|.+.-+ ..+++. -.| |.. .....+|... ..=++.+++
T Consensus 3 ~~~i~~~r~~~Ap~e~Vw~A~Td--~l~~W~~p~~~~~~~~~~~~~d-r~G--G~~-~~~~~~G~~~----~~g~v~ev~ 72 (155)
T 1zxf_A 3 DPFVRHSVTVKADRKTAFKTFLE--GFPEWWPNNFRTTKVGAPLGVD-KKG--GRW-YEIDEQGEEH----TFGLIRKVD 72 (155)
T ss_dssp SSCEEEEEEESSHHHHHHHHHTT--CSSSSSSGGGSTTTTCSSCEEE-TTT--TEE-ECCCTTTSCC----CCEEEEEEE
T ss_pred cceEEEEEEEeCCHHHHHHHHHh--hHHhhcCCCccccCCCceEEEE-CCC--CEE-EEECCCCCeE----eEEEEEEEC
Confidence 56789999999999999999999 3777763212 234443 222 344 2333334321 122455568
Q ss_pred CccEEEEEEE-eCCC-CCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCC-ChHHHHH----HHHHHHHHHHhh
Q 031888 75 TGRSVTYLVV-DGEL-KGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTP-APEKARD----AALGFLKCFDKF 147 (151)
Q Consensus 75 ~~~~~~y~ii-eg~~-~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~-~~~~~~~----~~~~~~k~ie~~ 147 (151)
++++|.|+-- +++. +.+-..-..++++.|.++| +|.++.+-..-. ...+ ......+ -...++.+|++|
T Consensus 73 pp~rl~~tw~~~~~~~~~~~~~s~vt~~l~~~~~g---~T~ltl~~~~~~--~~~~~~~~~~~~~~~~GW~~~l~~L~~~ 147 (155)
T 1zxf_A 73 EPDTLVIGWRLNGFGRIDPDNSSEFTVTFVADGQK---KTRVDVEHTHFD--RMGTKHAKRVRNGMDKGWPTILQSFQDK 147 (155)
T ss_dssp TTTEEEEECCCSSSSSCCCSSCCCEEEEEEEETTT---EEEEEEEECSST--TSCHHHHHHHHHHHTTTHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCCCCCCCCcEEEEEEEEECCCC---cEEEEEEEeccc--ccccchhHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999843 3321 0001224568899998763 598776654211 1101 1112222 347788888887
Q ss_pred hh
Q 031888 148 QL 149 (151)
Q Consensus 148 l~ 149 (151)
|-
T Consensus 148 l~ 149 (155)
T 1zxf_A 148 ID 149 (155)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 68
>2lio_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.97 E-value=0.00019 Score=50.90 Aligned_cols=121 Identities=10% Similarity=0.081 Sum_probs=76.0
Q ss_pred cEEEEEEEcCCH-HHHHHHhhCCCcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEEEeCccEEEE
Q 031888 3 KMKGQVVLNLPA-EKAWEMYRNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEGVETGRSVTY 81 (151)
Q Consensus 3 ~~~~~~~i~a~a-~~vW~~~~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~~~~~~~~~y 81 (151)
+++.++.|+||+ ++||+++++...|..|+..- +.. .| ..-.+.....+ ...=+|.+++++++++|
T Consensus 5 ~i~~e~~i~A~~~~~VW~~IStPegL~~Wfad~---v~~-~g-----~~~~F~w~~~~-----~~~~~v~~~~~~~~i~F 70 (136)
T 2lio_A 5 KIHLEYLLNATSKNILWSAISTPTGLEDWFADK---VVS-DD-----KTVTFCWGKTE-----QRQAGIVAIRAYSFIRF 70 (136)
T ss_dssp EEEEEEEECTTSCTHHHHGGGSHHHHTTTSSSE---EEE-ET-----TEEEEESSSSS-----EEEEEEEEEETTTEEEE
T ss_pred cEEEEEEecCChHHHHHHHhCChhhhhcccCCC---Ccc-cC-----ceEEEEeCCCC-----cEeEEEEEEcCCCEEEE
Confidence 678899999999 99999999999999999652 222 23 22233443312 14556666689999999
Q ss_pred EEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHhhh
Q 031888 82 LVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKARDAALGFLKCFDKFQ 148 (151)
Q Consensus 82 ~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~~~~~~~~~k~ie~~l 148 (151)
+-..-+ ..++..++++.+.+.. +++.++-+ .|--.+ +.++........+.++-+||
T Consensus 71 rW~~~~----~~~~~~e~~l~~~~~t--~~~~L~vt-dFa~~~----~~e~~~~gW~~~l~~Lk~~l 126 (136)
T 2lio_A 71 HWLDDE----NERDYFEIKMSYNELT--GDYVLEIT-DFSEAD----EADDLKELWDSQVSKLRRTC 126 (136)
T ss_dssp EESSSS----SSSCEEEEEEEECTTT--SCEEEEEE-EEECHH----HHHHHHHHHHHHHHHHHHHT
T ss_pred EccCCC----CCceEEEEEEEecCCC--CcEEEEEe-cCCCcc----chhHHHhhHHHHHHHHHHHh
Confidence 997643 3446777888776532 26777666 333221 12333444455555555554
No 69
>2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa} SCOP: d.129.3.7
Probab=97.01 E-value=0.023 Score=41.10 Aligned_cols=107 Identities=12% Similarity=-0.013 Sum_probs=69.1
Q ss_pred cEEEEEEEcCC---------HHHHHHHhhCC-CcccccCccccceEEEEcCCCCCCeEEEEEecCCCcceeeeEEEEEEE
Q 031888 3 KMKGQVVLNLP---------AEKAWEMYRNN-EIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPAVHSYVKESIEKIEG 72 (151)
Q Consensus 3 ~~~~~~~i~a~---------a~~vW~~~~d~-~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g~~~~~~~~kErl~~ 72 (151)
++++.+.||-| .+++|+.|..- .+-..++|+ +.+|++++..+ ..-.|.++|+.+ + ++|++..
T Consensus 2 ~f~htvpIN~p~~p~~p~LTr~QlW~GL~~kar~p~~Fvp~-i~~c~Vlse~~-~~~~R~l~fg~~-~-----i~e~vtl 73 (157)
T 2ffs_A 2 QFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRAREPQYFVVG-LERFEILVDDG-DRLHRRLYLPGL-V-----VEDEVVL 73 (157)
T ss_dssp CEEEEEECCCCCC---CCCCHHHHHHHHHHHHHCGGGTCTT-CCEEEEEEECS-SEEEEEEEETTE-E-----EEEEEEE
T ss_pred ceeEEEecCCCCCCCCCccCHHHHHHHHHHHhcChhhcccc-cCeEEEEecCC-CeEEEEEEECCC-c-----cceEEEE
Confidence 46777888775 37899998743 345678895 99999985432 267899999666 2 7899885
Q ss_pred EeCccEEEEEEEeCCCCCceeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCC
Q 031888 73 VETGRSVTYLVVDGELKGMYDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTS 126 (151)
Q Consensus 73 ~~~~~~~~y~iieg~~~~~~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~ 126 (151)
.+..++.|.+-...-. -.-+-++.+....+ | .+-.++.|+-..++
T Consensus 74 -~~~~~v~f~~~~t~~~---~gs~ltn~Iee~~~----g-~L~lrF~ye~~~p~ 118 (157)
T 2ffs_A 74 -KAPDSAHYSIKPSAEV---AGGSLDMTIEEPEP----G-SLFVRFAYCTRYLQ 118 (157)
T ss_dssp -ETTTEEEEEECCCSSS---BEEEEEEEEEEEET----T-EEEEEEEEEEECSC
T ss_pred -cCCcEEEEEcccccCC---CCceEEEEEeeCCC----C-cEEEEEEEEccCCC
Confidence 4888899999773211 11223333433222 3 45556777754443
No 70
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=96.28 E-value=0.22 Score=37.07 Aligned_cols=142 Identities=8% Similarity=-0.032 Sum_probs=78.4
Q ss_pred EEEEEEcCCHHHHH-HHhhCCCcccccCccccceEEEEcC-CCCCCeEEEEEecC--CCcceee-eEEEEEEEE-eCccE
Q 031888 5 KGQVVLNLPAEKAW-EMYRNNEIISKINPEMLAHAEYIQG-DGSPGSLRLFKLGP--AVHSYVK-ESIEKIEGV-ETGRS 78 (151)
Q Consensus 5 ~~~~~i~a~a~~vW-~~~~d~~~l~~~~P~~v~s~~~~eG-dg~~GsvR~~~~~~--g~~~~~~-~~kErl~~~-~~~~~ 78 (151)
..+..+++++++|+ .++.|....++|.+. +.++++++- ++. -.|-+....+ ..+...| ++--|-... +....
T Consensus 69 k~~~~v~~~~~~v~~~~~~d~~~r~~Wd~~-~~~~~vle~~~~~-t~I~~~~~~p~~~~~~~~RDfv~~r~~~~~~~~~v 146 (229)
T 1em2_A 69 ILKTFLPCPAELVYQEVILQPERMVLWNKT-VTACQILQRVEDN-TLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYL 146 (229)
T ss_dssp EEEEEESSCHHHHHHHTTTCHHHHTTTCTT-EEEEEEEEEETTT-EEEEEEEECCBTTTTBCCEEEEEEEEEEECSSEEE
T ss_pred EEEEEecCCHHHHHHHHHhCccchhhcccc-cceEEEEEecCCC-eEEEEEEecCcCCCCcCCCeeEEEEEEEEcCCEEE
Confidence 45667899999999 778888877999997 777777754 222 1233332222 2222112 333332222 22222
Q ss_pred EEEEEEeCC-CC---Cc--eeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChH---HHHHHHHHHHHHHHhhhh
Q 031888 79 VTYLVVDGE-LK---GM--YDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPE---KARDAALGFLKCFDKFQL 149 (151)
Q Consensus 79 ~~y~iieg~-~~---~~--~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~---~~~~~~~~~~k~ie~~l~ 149 (151)
+...=++-+ .+ .. ...+.+-+.+.|.+++ .++|.++|....+|.+. .|... .+......+++.|-+++-
T Consensus 147 i~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~-~~~t~vt~~~~~Dp~G~-iP~~l~n~~~~~~~~~~~~~Lr~~~~ 224 (229)
T 1em2_A 147 SSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASN-PRVCTFVWILNTDLKGR-LPRYLIHQSLAATMFEFAFHLRQRIS 224 (229)
T ss_dssp EEEEECCCTTSCCCTTSEECEECSEEEEEEECSSC-TTCEEEEEEECEECCSS-SCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccCCCCCCCCCCEeeeecccEEEEEecCCC-CCcEEEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222 12 11 2445577888886521 14799999999999885 33221 123344566777766664
Q ss_pred c
Q 031888 150 S 150 (151)
Q Consensus 150 ~ 150 (151)
+
T Consensus 225 ~ 225 (229)
T 1em2_A 225 E 225 (229)
T ss_dssp H
T ss_pred H
Confidence 3
No 71
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=96.24 E-value=0.2 Score=37.35 Aligned_cols=141 Identities=6% Similarity=-0.057 Sum_probs=79.4
Q ss_pred EEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcC-CCCCCeEEEEEecCCCc--ceee-eEEEEEEEEeCccEE
Q 031888 4 MKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQG-DGSPGSLRLFKLGPAVH--SYVK-ESIEKIEGVETGRSV 79 (151)
Q Consensus 4 ~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eG-dg~~GsvR~~~~~~g~~--~~~~-~~kErl~~~~~~~~~ 79 (151)
+..+.+|++|+++||+.+.|...-++|.+. +.++++++- ++.. .|-+....+... ...| ++--|-.....+..+
T Consensus 69 ~k~~~~v~~~~~~v~~~l~d~~~r~~Wd~~-~~~~~vle~id~~~-~I~y~~~~~~~~~~v~~RDfv~~r~~~~~~~~~v 146 (224)
T 1jss_A 69 YKAQGVMDDVVNNVIDHIRPGPWRLDWDRL-MTSLDVLEHFEENC-CVMRYTTAGQLLNIISPREFVDFSYTVGYEEGLL 146 (224)
T ss_dssp EEEEEEESSCHHHHHHHHSSSTTHHHHCSS-EEEEEEEEECSTTE-EEEEEEECCBTTTTBCCEEEEEEEEEEEETTEEE
T ss_pred EEEEEEEeCCHHHHHHHHhCcccccccccc-eeeEEEEEEcCCCe-EEEEEEcccccCCCCCCCeEEEEEEEEEcCCeEE
Confidence 466788999999999999997666999997 777788764 3221 343433332211 1112 333332222222222
Q ss_pred E-EEEEeCC-CC-Cc--eeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH----HHHHHHHHHHHHhhhh
Q 031888 80 T-YLVVDGE-LK-GM--YDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA----RDAALGFLKCFDKFQL 149 (151)
Q Consensus 80 ~-y~iieg~-~~-~~--~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~----~~~~~~~~k~ie~~l~ 149 (151)
. ..-++-+ .. .. ...+.+.+.+.|.+++ +++|.++|.+..+|.+.. | .--+ ......+++.|.+++.
T Consensus 147 i~~~Sv~hp~~~~g~VR~~~~~~g~~i~p~~~~-~~~t~vt~~~~~Dp~G~i-P-~~lvn~~~~~~~~~~~~~Lr~~~~ 222 (224)
T 1jss_A 147 SCGVSVEWSETRPEFVRGYNHPCGWFCVPLKDS-PSQSLLTGYIQTDLRGMI-P-QSAVDTAMASTLANFYSDLRKGLR 222 (224)
T ss_dssp EEEEECCCCCCCTTSEECEECSEEEEEEEETTE-EEEEEEEEEECEECCSCC-C-HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeeeecCCCCCCCEEEEecccEEEEEEcCCC-CCceEEEEEEEeCCCCCc-c-HHHHHHHHHHhHHHHHHHHHHHHh
Confidence 1 1112211 11 12 2455677889997542 137999999999999853 2 2211 3334566666666653
No 72
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=96.04 E-value=0.18 Score=38.28 Aligned_cols=140 Identities=9% Similarity=0.093 Sum_probs=74.6
Q ss_pred EEEEEE-cCCHHHHHHHhhCCCcccccCccccceEEEEcC-CCCCCeEEEEEecCCCcceee-eEEEEEEEEe----C--
Q 031888 5 KGQVVL-NLPAEKAWEMYRNNEIISKINPEMLAHAEYIQG-DGSPGSLRLFKLGPAVHSYVK-ESIEKIEGVE----T-- 75 (151)
Q Consensus 5 ~~~~~i-~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eG-dg~~GsvR~~~~~~g~~~~~~-~~kErl~~~~----~-- 75 (151)
.....+ +++++.|++++.|....++|-|. +.++++++- ++ -+.|-++.+....+...| ++-.|-.... +
T Consensus 76 K~~~~~~~~~~~~v~~~l~d~~~r~~Wd~~-~~~~~vle~i~~-~~~i~y~~~~~p~p~s~RDfV~~r~~~~~~~~~~~g 153 (255)
T 2e3n_A 76 KATHAVKGVTGHEVCNYFWNVDVRNDWETT-IENFHVVETLAD-NAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTEND 153 (255)
T ss_dssp EEEEEEETCCHHHHHHHHHCGGGHHHHCCS-EEEEEEEEEEET-TEEEEEEEECCCTTSCCEEEEEEEEEEEECCSSTTS
T ss_pred EEEEEEcCCCHHHHHHHHhCcchHhhhhhh-cceeEEEEEcCC-CCEEEEEEeecCCCcCCceeEEEEEEEeccccccCC
Confidence 334455 59999999999999888999996 778788765 32 235666666432222112 2222211111 1
Q ss_pred -cc--EEEEEEEeCCCCC--c-eee-----EEEEEEEEec-CCC----CCCccEEEEEEEEEeCCCCCCChHHH-----H
Q 031888 76 -GR--SVTYLVVDGELKG--M-YDP-----YRVTFSFTPV-EGK----QDEMCIAEWAAEFEPLTTSTPAPEKA-----R 134 (151)
Q Consensus 76 -~~--~~~y~iieg~~~~--~-~~~-----y~~t~~v~p~-~~g----~~~~s~v~W~~~~~~~~~~~~~~~~~-----~ 134 (151)
+. .+.+++-....+. . ++- +....-+.|. +.- +.++|.++|....+|.+.. |.-+ .
T Consensus 154 ~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~~~l~~~~~~t~vt~~~~~Dp~G~i---P~~lvn~~~~ 230 (255)
T 2e3n_A 154 PETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYVANVNPGGWA---PASVLRAVAK 230 (255)
T ss_dssp CCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CCCCCCGGGEEEEEEEEEEEECSSCC---CHHHHHHHHH
T ss_pred CCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCCcccccCCCcEEEEEEEEeCCCCcc---CHHHHHHHHh
Confidence 11 1222332222221 1 211 1222333442 110 0148999999999998742 2322 3
Q ss_pred HHHHHHHHHHHhhhh
Q 031888 135 DAALGFLKCFDKFQL 149 (151)
Q Consensus 135 ~~~~~~~k~ie~~l~ 149 (151)
.....++++|.+|+.
T Consensus 231 ~~~~~~l~~L~k~v~ 245 (255)
T 2e3n_A 231 REYPKFLKRFTSYVQ 245 (255)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHH
Confidence 445677888888775
No 73
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=95.99 E-value=0.31 Score=36.09 Aligned_cols=140 Identities=13% Similarity=0.137 Sum_probs=79.2
Q ss_pred EEEEEEEcCCHHHHHHHh-hCCCcccccCccccceEEEEcCC-CCCCeEEEEEecC--CCcceee-eEEEEEEEEeCccE
Q 031888 4 MKGQVVLNLPAEKAWEMY-RNNEIISKINPEMLAHAEYIQGD-GSPGSLRLFKLGP--AVHSYVK-ESIEKIEGVETGRS 78 (151)
Q Consensus 4 ~~~~~~i~a~a~~vW~~~-~d~~~l~~~~P~~v~s~~~~eGd-g~~GsvR~~~~~~--g~~~~~~-~~kErl~~~~~~~~ 78 (151)
+..+..|++|+++||+.+ .|....++|.+. +.++++++-- +.. .|-+....+ ..+...| ++--|-...+.+..
T Consensus 57 ~k~~~~v~~~~~~v~~~l~~d~~~r~~Wd~~-~~~~~vle~~~~~t-~I~y~~~~~~~~~~v~~RDfv~~r~~~~~~~~~ 134 (221)
T 3p0l_A 57 FRLEVVVDQPMERLYEELVERMEAMGEWNPN-VKEIKVLQKIGKDT-FITHELAAEAAGNLVGPRDFVSVRCAKRRGSTC 134 (221)
T ss_dssp EEEEEEESSCHHHHHHHHTTTGGGTTTSCTT-CSEEEEEEECSSSE-EEEEEEECC---CCSCCEEEEEEEEEEECSSCE
T ss_pred EEEEEEEcCCHHHHHHHHHhccchhhhcCcc-hheEEEEEecCCCe-EEEEEeeccccCCccCCceEEEEEEEEEcCCeE
Confidence 456778899999999998 688778999996 7788887653 221 233332222 1111112 33323222222211
Q ss_pred E-EEEEEeCC-CC---Cce--eeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCChHHH-----HHHHHHHHHHHHh
Q 031888 79 V-TYLVVDGE-LK---GMY--DPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAPEKA-----RDAALGFLKCFDK 146 (151)
Q Consensus 79 ~-~y~iieg~-~~---~~~--~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~~~~-----~~~~~~~~k~ie~ 146 (151)
+ ...=++-+ .+ ..+ ..+.+-+.+.|.+++ +++|.++|....+|.+.. |.-+ ......+++.|.+
T Consensus 135 vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~-~~~t~vt~~~~~Dp~G~i---P~~lvn~~~~~~~~~~~~~Lr~ 210 (221)
T 3p0l_A 135 VLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGS-PSKTKLTWLLSIDLKGWL---PKSIINQVLSQTQVDFANHLRK 210 (221)
T ss_dssp EECCEECCCTTSCCCTTSEECEECSCEEEEEEETTE-EEEEEEEEEECEECCSSC---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCC-CCcEEEEEEEEecCCCCC---CHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11112222 12 112 445677888998652 127999999999998762 2322 3444667777777
Q ss_pred hhh
Q 031888 147 FQL 149 (151)
Q Consensus 147 ~l~ 149 (151)
++-
T Consensus 211 ~~~ 213 (221)
T 3p0l_A 211 RLE 213 (221)
T ss_dssp HTC
T ss_pred HHh
Confidence 764
No 74
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=95.39 E-value=0.57 Score=34.79 Aligned_cols=144 Identities=10% Similarity=-0.020 Sum_probs=77.5
Q ss_pred EEEEEEEcCCHHHHHHHh--hCCCcccccCccccceEEEEcCCCCCCeEEEEEecCC--Ccceee-eEEEEEEEEeCccE
Q 031888 4 MKGQVVLNLPAEKAWEMY--RNNEIISKINPEMLAHAEYIQGDGSPGSLRLFKLGPA--VHSYVK-ESIEKIEGVETGRS 78 (151)
Q Consensus 4 ~~~~~~i~a~a~~vW~~~--~d~~~l~~~~P~~v~s~~~~eGdg~~GsvR~~~~~~g--~~~~~~-~~kErl~~~~~~~~ 78 (151)
+..+..|++++++|++.+ .|....++|.+. +.++++++--.+...|-+....+. .+...| ++--|-....++.+
T Consensus 69 ~k~~~~v~~~~~~v~~~l~~~d~~~r~~Wd~~-~~~~~vle~i~~~~~i~~~~~~~~~~~~v~~RDfv~~r~~~~~~~g~ 147 (231)
T 2r55_A 69 YRGEGIVYGTLEEVWDCVKPAVGGLRVKWDEN-VTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGT 147 (231)
T ss_dssp EEEEEEESSCHHHHHHHHCC--CCSHHHHCTT-CSEEEEEEECSSSEEEEEEECCCBTTTTBCCEEEEEEEEEEECTTSC
T ss_pred EEEEEEECCCHHHHHHHHHhhCcchhhhhccc-cceeEEEEEcCCCEEEEEEEeccccCCccCCCeEEEEEEEEEcCCCE
Confidence 456778899999999999 777777999996 667777655322223322221121 111112 33333222222322
Q ss_pred EE--EEEEeCC-CC---Cce--eeEEEEEEEEecCC-CCCCccEEEEEEEEEeCCCCCCChH---HHHHHHHHHHHHHHh
Q 031888 79 VT--YLVVDGE-LK---GMY--DPYRVTFSFTPVEG-KQDEMCIAEWAAEFEPLTTSTPAPE---KARDAALGFLKCFDK 146 (151)
Q Consensus 79 ~~--y~iieg~-~~---~~~--~~y~~t~~v~p~~~-g~~~~s~v~W~~~~~~~~~~~~~~~---~~~~~~~~~~k~ie~ 146 (151)
+. ..=++-+ .+ ..+ ..+.+-+.+.|.++ + ++|.|+|....+|.+. .|..- .+.......+++|.+
T Consensus 148 ~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~--~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~~~~~Lr~ 224 (231)
T 2r55_A 148 ISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEP--TKTNLVTFFHTDLSGY-LPQNVVDSFFPRSMTRFYANLQK 224 (231)
T ss_dssp EEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--C--CCEEEEEEECEECCSS-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCC--CcEEEEEEEEeCCCCC-ccHHHHHHHHhHhHHHHHHHHHH
Confidence 22 2222222 12 112 33456677888642 2 4899999999999875 32111 123344667777777
Q ss_pred hhhcC
Q 031888 147 FQLSY 151 (151)
Q Consensus 147 ~l~~~ 151 (151)
++.+|
T Consensus 225 ~~~~~ 229 (231)
T 2r55_A 225 AVKQF 229 (231)
T ss_dssp HHHGG
T ss_pred HHHHh
Confidence 76543
No 75
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=95.06 E-value=0.39 Score=37.09 Aligned_cols=114 Identities=11% Similarity=0.086 Sum_probs=70.4
Q ss_pred EEEEEEEcCCHHHHHHHhhCCCcccccCccccceEEEEcC-CCCCCeEEEEEecCC-Ccceee-eEEEEEEEE--eCc--
Q 031888 4 MKGQVVLNLPAEKAWEMYRNNEIISKINPEMLAHAEYIQG-DGSPGSLRLFKLGPA-VHSYVK-ESIEKIEGV--ETG-- 76 (151)
Q Consensus 4 ~~~~~~i~a~a~~vW~~~~d~~~l~~~~P~~v~s~~~~eG-dg~~GsvR~~~~~~g-~~~~~~-~~kErl~~~--~~~-- 76 (151)
+..+.+|++|++.||+.+.|....++|.+. +.++++++- ++. -.|-++..... .....| ++-.|-... +..
T Consensus 90 ~k~~~~v~~~~~~v~~~L~D~~~R~~WD~~-~~~~~vle~id~~-~ivY~~~~p~~~~~v~~RDFV~lr~~r~~~~~G~~ 167 (258)
T 3fo5_A 90 FHMEMVVHVDAAQAFLLLSDLRQRPEWDKH-YRSVELVQQVDED-DAIYHVTSPALGGHTKPQDFVILASRRKPCDNGDP 167 (258)
T ss_dssp EEEEEEESSCHHHHHHHHHCGGGGGGTCTT-CCEEEEEEEEETT-EEEEEEEECCCTTCSSCEEEEEEEEEECCSSTTCC
T ss_pred EEEEEEEeCCHHHHHHHHhCchhHhHhhhh-ccEEEEEEEcCCC-eEEEEEecCCccCCCCCCEEEEEEEEEeccCCCCE
Confidence 567788999999999999999888999997 777777743 222 13334444321 111112 343443321 122
Q ss_pred cEEEEEEEeC-CCC--Cc---eeeEEEEEEEEecCCCCCCccEEEEEEEEEe
Q 031888 77 RSVTYLVVDG-ELK--GM---YDPYRVTFSFTPVEGKQDEMCIAEWAAEFEP 122 (151)
Q Consensus 77 ~~~~y~iieg-~~~--~~---~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~ 122 (151)
..+...=++- ..+ .. -..+.+-+-+.|.+++ +|.|++....+|
T Consensus 168 yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~~---~t~VtY~~q~dp 216 (258)
T 3fo5_A 168 YVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQ---LTKVSYYNQATP 216 (258)
T ss_dssp EEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEETT---EEEEEEEESCCG
T ss_pred EEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCCC---CEEEEEEEeeCC
Confidence 2333333332 222 11 2577789999998875 899999887777
No 76
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=73.93 E-value=25 Score=26.13 Aligned_cols=136 Identities=8% Similarity=0.020 Sum_probs=77.1
Q ss_pred EEEEEEEcCCHHHHHH-HhhCCCcccccCccccceEEEEcC-CCCCCeEEEEEecCCCcceee-eEEEEEEE--E-eCcc
Q 031888 4 MKGQVVLNLPAEKAWE-MYRNNEIISKINPEMLAHAEYIQG-DGSPGSLRLFKLGPAVHSYVK-ESIEKIEG--V-ETGR 77 (151)
Q Consensus 4 ~~~~~~i~a~a~~vW~-~~~d~~~l~~~~P~~v~s~~~~eG-dg~~GsvR~~~~~~g~~~~~~-~~kErl~~--~-~~~~ 77 (151)
+..+.+|++++++++. ++.| .++|.|. +.++++++- ++. -.|-+..+....+...| ++-.|-.. + +...
T Consensus 77 ~K~~~~v~~~~~~v~~~ll~d---r~~Wd~~-~~~~~vle~id~~-~~I~y~~~~~p~p~~~RDfv~~r~~r~~~~~g~~ 151 (237)
T 2pso_A 77 WKASVEVEAPPSVVLNRVLRE---RHLWDED-FVQWKVVETLDRQ-TEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMC 151 (237)
T ss_dssp EEEEEEESSCHHHHHHHHHHC---GGGTCTT-BCCCEEEEEEETT-EEEEEEEECCSSSCCCEEEEEEEEEESCCGGGCE
T ss_pred EEEEEEEcCChHHHHHHHHhh---hhhHHhh-hceEEEEEEcCCC-cEEEEEEecCCCCcCCeEEEEEEEEEEECCCCEE
Confidence 5778899999988865 6777 5899997 666677654 221 13444444322221112 33333221 2 2233
Q ss_pred EEEEEEEeCC-CC-C-c--eeeEEEEEEEEecCCCCCCccEEEEEEEEEeCCCCCCCh--HHHHHHHHHHHHHHHhhh
Q 031888 78 SVTYLVVDGE-LK-G-M--YDPYRVTFSFTPVEGKQDEMCIAEWAAEFEPLTTSTPAP--EKARDAALGFLKCFDKFQ 148 (151)
Q Consensus 78 ~~~y~iieg~-~~-~-~--~~~y~~t~~v~p~~~g~~~~s~v~W~~~~~~~~~~~~~~--~~~~~~~~~~~k~ie~~l 148 (151)
.+..+-++-+ .+ . . ...+.+-+.+.|.+++ +|.|+|.+..+|.+. .|.- ..+.......++.|-+++
T Consensus 152 vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~~---~t~vt~~~~~Dp~G~-iP~~ln~~~~~~~~~~l~~LR~~~ 225 (237)
T 2pso_A 152 TLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSG---KSRLTHICRIDLKGH-SPEWYSKGFGHLCAAEVARIRNSF 225 (237)
T ss_dssp EEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTT---CEEEEEEEEECCSSS-CTTTTTTHHHHHHHHHHHHHHHTT
T ss_pred EEEEEcccCCCCCCCCcEEEEEeccEEEEEECCCC---CEEEEEEEEeCCCCC-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333332 22 1 1 3567788889998764 899999999999864 3221 122344445566665544
No 77
>2ejx_A ST0812; arcaea, unknown function, NPPSFA; 1.79A {Sulfolobus tokodaii str}
Probab=38.22 E-value=15 Score=25.68 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=29.9
Q ss_pred CccEEEEEEEcCCHHHHHHHhhCCCc-ccccCccccceE
Q 031888 1 MKKMKGQVVLNLPAEKAWEMYRNNEI-ISKINPEMLAHA 38 (151)
Q Consensus 1 M~~~~~~~~i~a~a~~vW~~~~d~~~-l~~~~P~~v~s~ 38 (151)
|-+++.++..+-.++.|-.+++|..- +|+++|. +++.
T Consensus 4 ~M~~~~~i~t~hd~~~v~~ILSDP~F~lp~llp~-~k~~ 41 (139)
T 2ejx_A 4 MMKVEKEIKTNQDIDVVMTIFSDPAFTIPQIFPG-IASI 41 (139)
T ss_dssp --CEEEEEECSSCHHHHHHHHTCHHHHHHHHSTT-EEEE
T ss_pred eEEEEEEeccCCChhheEEEecCCceEehhhCCc-EEEE
Confidence 66788888899999999999999875 5999995 6554
No 78
>2kku_A Uncharacterized protein; alpha/beta protein, structural genomics, PSI-2, protein STRU initiative; NMR {Archaeoglobus fulgidus}
Probab=20.58 E-value=74 Score=22.67 Aligned_cols=25 Identities=8% Similarity=0.126 Sum_probs=20.5
Q ss_pred cEEEEEEEc-CCHHHHHHHhhCCCcc
Q 031888 3 KMKGQVVLN-LPAEKAWEMYRNNEII 27 (151)
Q Consensus 3 ~~~~~~~i~-a~a~~vW~~~~d~~~l 27 (151)
.++....+. .+++.+|+.++|...|
T Consensus 79 ea~I~~Ii~~~~P~~lWe~~~d~~gI 104 (161)
T 2kku_A 79 EARIKRVVLSENPMQFFETFGDRVFL 104 (161)
T ss_dssp EEEEEEEEEESCTHHHHHHTSTTBSS
T ss_pred EEEEEEEEecCCHHHHHHHhCcccCc
Confidence 456666777 9999999999998766
Done!