BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031890
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54ND3|UXT_DICDI Protein UXT homolog OS=Dictyostelium discoideum GN=DDB_G0285389
PE=3 SV=1
Length = 161
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 93/136 (68%)
Query: 5 RQEKVQKFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTSLRTLVN 64
R + ++ +E F++ L DL ++I +R+KV E + + +L+ NIE L +N + S++T++N
Sbjct: 25 RLDSIKYYETFINETLNVDLNKSIEDREKVLENLENYLELKSNIELLIENKMDSMKTMIN 84
Query: 65 LGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIASIK 124
LGSE Y++A V DT +I+VDIGLG HV++T EA+KFI+++E + + ++ T+ I IK
Sbjct: 85 LGSECYVKARVQDTSYIYVDIGLGIHVKYTLEEAIKFINEKETFLNKTVENQTKKINQIK 144
Query: 125 AQIKLVCEGICELLQL 140
+I L+ G+ EL L
Sbjct: 145 TKIDLIQNGLKELKHL 160
>sp|A7T0W1|UXT_NEMVE Protein UXT homolog OS=Nematostella vectensis GN=v1g140887 PE=3
SV=1
Length = 159
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 6 QEKVQKFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTS--LRTLV 63
QEK++K+EEF+D+RL DL +D++ + ++ L+ +IE ++K + LR+ V
Sbjct: 12 QEKIRKYEEFLDQRLAKDLEAVFKSQDEIVAKITEYTQLKSSIEQIQKTDLKGKDLRSRV 71
Query: 64 NLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIASI 123
+LG + QA VPD IF+ +G GF VEFT SEAL FI ++ + +D+ + A I
Sbjct: 72 DLGCNFFCQASVPDPSRIFIAVGYGFFVEFTLSEALNFIEKKLAHLQHSVDKLGKDAAKI 131
Query: 124 KAQIKLVCEGICEL 137
KA +KLV G+ EL
Sbjct: 132 KAHMKLVLGGLQEL 145
>sp|Q9WTZ0|UXT_MOUSE Protein UXT OS=Mus musculus GN=Uxt PE=2 SV=1
Length = 157
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 78/131 (59%)
Query: 7 EKVQKFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTSLRTLVNLG 66
EKV ++E F+ L+ DL + + RDKV+EQ ++ LR IE L++ + + L V+LG
Sbjct: 15 EKVLRYETFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74
Query: 67 SEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIASIKAQ 126
++ VPDT I+V +G GF +E T +EALKFI ++ + D T+ +IKA
Sbjct: 75 CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSLTKDSMNIKAH 134
Query: 127 IKLVCEGICEL 137
I ++ EG+ EL
Sbjct: 135 IHMMLEGLREL 145
>sp|Q63ZY7|UXT_RAT Protein UXT OS=Rattus norvegicus GN=Uxt PE=2 SV=1
Length = 157
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 78/131 (59%)
Query: 7 EKVQKFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTSLRTLVNLG 66
EKV ++E F+ L+ DL + + RDKV+EQ ++ LR IE L++ + + L V+LG
Sbjct: 15 EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74
Query: 67 SEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIASIKAQ 126
++ VPDT I+V +G GF +E T +EALKFI ++ + D T+ +IKA
Sbjct: 75 CNFFVDTMVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDSLTKDSMNIKAN 134
Query: 127 IKLVCEGICEL 137
I ++ EG+ EL
Sbjct: 135 IHMMLEGLREL 145
>sp|Q32P97|UXT_BOVIN Protein UXT OS=Bos taurus GN=UXT PE=2 SV=1
Length = 156
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%)
Query: 7 EKVQKFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTSLRTLVNLG 66
EKV ++E F+ L+ DL + + RDKV+EQ + LR IE L++ + + L V+LG
Sbjct: 15 EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLAKYLQLRNVIERLQEANHSELYMQVDLG 74
Query: 67 SEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIASIKAQ 126
++ VPDT I+V +G GF +E T +EALKFI ++ + D T+ +IKA
Sbjct: 75 CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSDNLTKDSMNIKAH 134
Query: 127 IKLVCEGICEL 137
I ++ EG+ EL
Sbjct: 135 IHMLLEGLREL 145
>sp|Q9UBK9|UXT_HUMAN Protein UXT OS=Homo sapiens GN=UXT PE=1 SV=1
Length = 157
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%)
Query: 7 EKVQKFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTSLRTLVNLG 66
EKV ++E F+ L+ DL + + RDKV+EQ + LR IE L++ + L V+LG
Sbjct: 15 EKVLRYETFISDVLQRDLRKVLDHRDKVYEQLAKYLQLRNVIERLQEAKHSELYMQVDLG 74
Query: 67 SEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIASIKAQ 126
++ VPDT I+V +G GF +E T +EALKFI ++ + + T+ +IKA
Sbjct: 75 CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLLTELSNSLTKDSMNIKAH 134
Query: 127 IKLVCEGICEL 137
I ++ EG+ EL
Sbjct: 135 IHMLLEGLREL 145
>sp|O28216|PFDA_ARCFU Prefoldin subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=pfdA PE=3 SV=1
Length = 137
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 42 SDLRKNIENLE--KNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEAL 99
++ RK +E LE ++ TS+ L+NLG V+ DV +++ + VDIG G VE EA+
Sbjct: 36 NEYRKTLETLEFFESIDTSVEALMNLGGGVFAYVDVKNSKKMLVDIGSGVVVEREVGEAI 95
Query: 100 KFISQREDKIARQIDEYTRLIASIKAQ 126
+F+ R KI ++ T ++ + +Q
Sbjct: 96 EFVKNRIKKIEENQEKMTSMLQQVLSQ 122
>sp|Q12ZJ7|PFDA_METBU Prefoldin subunit alpha OS=Methanococcoides burtonii (strain DSM
6242) GN=pfdA PE=3 SV=1
Length = 138
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 38 QKIFSDLRKNIENLE--KNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTW 95
Q D + I LE K++ ++ T++ LG+ + A++ D I V +G G VE T
Sbjct: 34 QMSIEDCTRAILTLEELKSASGAINTMIPLGAGALIHANIADVDKIVVSVGAGISVEKTP 93
Query: 96 SEALKFISQREDKIARQIDEYTRLIASI 123
+EA++ ++QR++++ + ++ + I
Sbjct: 94 TEAIETLTQRKEELGKVVERLNGTLTQI 121
>sp|Q8HYI9|PFD5_BOVIN Prefoldin subunit 5 OS=Bos taurus GN=PFDN5 PE=2 SV=1
Length = 154
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 24 LTRAIAE----RDKVFEQQKIFSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQ 79
L+ +IA+ + K E + + L+KN E E LV L S +Y+ + D +
Sbjct: 29 LSTSIAQLKVVQTKYVEAKDCLNVLKKNNEGKE--------LLVPLTSSMYVPGKLHDVE 80
Query: 80 HIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDE 115
H+ +D+G G++VE T +A F ++ D + +Q+++
Sbjct: 81 HVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEK 116
>sp|Q5RAY0|PFD5_PONAB Prefoldin subunit 5 OS=Pongo abelii GN=PFDN5 PE=2 SV=1
Length = 154
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 62 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDE 115
LV L S +Y+ + D +H+ +D+G G++VE T +A F ++ D + +Q+++
Sbjct: 63 LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEK 116
>sp|Q99471|PFD5_HUMAN Prefoldin subunit 5 OS=Homo sapiens GN=PFDN5 PE=1 SV=2
Length = 154
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 62 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDE 115
LV L S +Y+ + D +H+ +D+G G++VE T +A F ++ D + +Q+++
Sbjct: 63 LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEK 116
>sp|Q9WU28|PFD5_MOUSE Prefoldin subunit 5 OS=Mus musculus GN=Pfdn5 PE=1 SV=1
Length = 154
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 62 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDE 115
LV L S +Y+ + D +H+ +D+G G++VE T +A F ++ D + +Q+++
Sbjct: 63 LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEK 116
>sp|Q04493|PFD5_YEAST Prefoldin subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=GIM5 PE=1 SV=1
Length = 163
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 41 FSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALK 100
F++ +I+ + + + LV + +Y+ + D + VDIG G++VE + A+
Sbjct: 44 FTECIDDIKTVSQAGNEGQKLLVPASASLYIPGKIVDNKKFMVDIGTGYYVEKSAEAAIA 103
Query: 101 FISQREDKIARQ-------IDEYTRLIASIKAQIK 128
F ++ DK+ ++ I E T+ SI+AQI+
Sbjct: 104 FYQKKVDKLNKESVQIQDIIKEKTQYSLSIEAQIR 138
>sp|A2STI6|PFDA_METLZ Prefoldin subunit alpha OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=pfdA PE=3 SV=1
Length = 147
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 61 TLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLI 120
TL+NLG + + A V DT+ I V IG G VE EA+ F+ R ++ + +
Sbjct: 64 TLLNLGGGISVHAIVTDTKKILVGIGAGITVEKPVEEAITFLHDRVTEMDASAKRLSESL 123
Query: 121 ASIKAQIKLV 130
++ Q++ V
Sbjct: 124 GKLQEQMRAV 133
>sp|Q8TUY7|PFDA_METKA Prefoldin subunit alpha OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pfdA PE=3 SV=1
Length = 157
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 62 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFI 102
LV +G++ +++A V DT+ + V IG G VE T EAL+ I
Sbjct: 65 LVPVGAQSFVRACVTDTERVIVGIGAGVAVERTIDEALESI 105
>sp|Q5JIE3|PFDA1_PYRKO Prefoldin subunit alpha 1 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pfdA1 PE=3 SV=1
Length = 146
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 41 FSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALK 100
F +++ +E L KN LV +G+ +++ + D ++ V +G G+ V+ + ++++
Sbjct: 39 FQAVKETLEGL-KNEEGEFEILVPIGAGSFLKGKIVDAKNAIVSVGAGYAVQKSLDDSIE 97
Query: 101 FISQREDKIARQIDEYTRLIASIKAQIKLVCEGICELLQLPAETSVQEAI 150
++ +R I EY IA + +K + + EL + E ++A+
Sbjct: 98 YLEKR-------IKEYEEAIAKTQEALKKLEAQLGELARQAQEIQQKQAM 140
>sp|Q2U9B0|BRE1_ASPOR E3 ubiquitin-protein ligase bre1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=bre1 PE=3 SV=1
Length = 760
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 61 TLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEF-TWSEALKFISQRE--------DKIAR 111
T VN GS+ + AD+P + V +GL V F ++ L++ S E D I R
Sbjct: 42 TSVNGGSKPHPDADMPWKDDLEVSLGLAGVVGFMSFQGGLRYPSSAEPTTSLTIKDAIWR 101
Query: 112 QIDEYTRLIASIKAQIK 128
Q+ EY R S++A++K
Sbjct: 102 QMQEYKREKVSLEAKLK 118
>sp|Q54V55|PFD5_DICDI Probable prefoldin subunit 5 OS=Dictyostelium discoideum GN=pfdn5
PE=3 SV=1
Length = 160
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 62 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDE 115
LV L S +Y+ + + + VDIG G++VE + F +++ I Q+++
Sbjct: 66 LVPLTSSIYLPGKINSNEKVLVDIGTGYYVEMGIEQGQNFSNRKVQLITEQVNK 119
>sp|A4YH83|PFDA_METS5 Prefoldin subunit alpha OS=Metallosphaera sedula (strain ATCC 51363
/ DSM 5348) GN=pfdA PE=3 SV=1
Length = 144
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 26/107 (24%)
Query: 44 LRKNIENLEK---------NSVTSLRTLVNL----GSEVYMQAD-----------VPDTQ 79
LRK I+ L+K N+ S + +NL G ++ + AD +P ++
Sbjct: 22 LRKEIDALQKLRDEIAESLNAARSAKEAINLIKGQGKDLLLSADRRGFVLLKVTEIPSSK 81
Query: 80 HIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYT-RLIASIKA 125
+ V++GLG++ E +A K + +RE+++ + + + T RL ++ A
Sbjct: 82 -VLVNLGLGYYAEIEPDQASKILDEREEQLNKSLQDITARLNNAVNA 127
>sp|Q46F99|PFDA_METBF Prefoldin subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pfdA PE=3 SV=1
Length = 144
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 61 TLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLI 120
T+V +G ++ A++ + + VD+G GF E T EA++ + +R++++ T+++
Sbjct: 62 TMVPVGFGSFVYAEIKNADKVIVDLGAGFSAEETADEAVETLKRRKEQL-------TKIL 114
Query: 121 ASIKAQIKLVCEGI------CELLQLPAE 143
+ A + +G+ E LQ P++
Sbjct: 115 EQMSASLTKYIQGMQALEVEAEKLQQPSQ 143
>sp|A8XPL7|PFD5_CAEBR Probable prefoldin subunit 5 OS=Caenorhabditis briggsae GN=pfd-5
PE=3 SV=2
Length = 154
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 40 IFSDLRKNIENLE--KNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSE 97
+ S K+I LE K L+ L +Y++A++ D V+IG G+ VE +
Sbjct: 42 LLSRNEKSISALEDVKVGTAGHTALIPLSESLYIRAELSDPNKHMVEIGTGYFVELDREK 101
Query: 98 ALKFISQREDKIARQID 114
A ++++ IA+Q++
Sbjct: 102 AKGIFDRKKEHIAKQVE 118
>sp|A9A592|PFDA_NITMS Prefoldin subunit alpha OS=Nitrosopumilus maritimus (strain SCM1)
GN=pfdA PE=3 SV=1
Length = 145
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 47 NIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQR- 105
+I++L KN + TLV +G Y+ + I ++IG G VE + A+ ++ +R
Sbjct: 43 SIKSLSKNPESD--TLVPIGLGTYVPTKISSDSKIILNIGAGVAVEKDFPSAINYLEERI 100
Query: 106 -------EDKIARQIDEYTRLIASIKAQIKLVCEGICELLQLP 141
+D A++ D RL KAQ+ + + + + Q P
Sbjct: 101 KEIEIAIQDTAAKKQDAAQRLEQG-KAQVNQLMQAMQQSGQPP 142
>sp|O94307|PFD5_SCHPO Probable prefoldin subunit 5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bob1 PE=1 SV=1
Length = 154
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 62 LVNLGSEVYMQADVP-DTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLI 120
LV L S +Y+ + + VDIG G++VE + EA ++ ++ + +A I+ I
Sbjct: 67 LVPLTSSLYVPGKLNLGNSKLLVDIGTGYYVEKSAGEATEYYKRKCEYLASSIENLNNAI 126
Query: 121 ASIKAQIKLV 130
+ QI+ V
Sbjct: 127 DAKSVQIRAV 136
>sp|A3CWZ2|PFDA_METMJ Prefoldin subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=pfdA PE=3 SV=1
Length = 149
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 34 VFEQQKIFSDLR-KNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVE 92
+ EQQ++ + + L++N+ ++ L+ +G Y++ V D H+ V+IG VE
Sbjct: 32 MIEQQRLEGTAAIETLRALQENADGAV--LLPIGGGAYLRVKVLDAGHVLVNIGADVSVE 89
Query: 93 FTWSEALKFISQREDKI 109
++A+ ++ ED+I
Sbjct: 90 RATADAVGYL---EDRI 103
>sp|O18054|PFD3_CAEEL Probable prefoldin subunit 3 OS=Caenorhabditis elegans GN=pfd-3
PE=3 SV=1
Length = 185
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 58 SLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYT 117
S T L +VY +A V + + + +G VE+ A K + + + + +DE T
Sbjct: 87 SFETTFLLSDDVYTKATVQKPEKVSIWLGANVMVEYDLENARKLLDKNRGSVQKVVDELT 146
Query: 118 RLIASIKAQI 127
++ IK QI
Sbjct: 147 NELSYIKDQI 156
>sp|A8GLX9|TILS_RICAH tRNA(Ile)-lysidine synthase OS=Rickettsia akari (strain Hartford)
GN=tilS PE=3 SV=1
Length = 430
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 11 KFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRK 46
K + +D + KP+L AIAE K+FE F DL K
Sbjct: 218 KINDLLDNKFKPELISAIAEAVKIFEYGFAFLDLVK 253
>sp|Q4UN67|TILS_RICFE tRNA(Ile)-lysidine synthase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=tilS PE=3 SV=1
Length = 430
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 11 KFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRK 46
K + +D + KP+L AIAE K+FE F DL K
Sbjct: 218 KINDLLDNKFKPELISAIAEAVKIFEYGFAFLDLVK 253
>sp|O27646|PFDA_METTH Prefoldin subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pfdA PE=1 SV=1
Length = 141
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 32/49 (65%)
Query: 61 TLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKI 109
TLV +G+ +++A++ DT + + +G G ++ + +A++ I +++++
Sbjct: 56 TLVPVGAGSFIKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKSQKNEL 104
>sp|A1AVU5|CYSG_RUTMC Siroheme synthase OS=Ruthia magnifica subsp. Calyptogena magnifica
GN=cysG PE=3 SV=1
Length = 472
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 13 EEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQ 72
E+ + + PD+ A+ E+ EQ K+++ K + +L KN + TL+ +G V ++
Sbjct: 393 EQLITHGMSPDMPVALVEKGTTPEQ-KVYTTTLKKLPDLVKNEIIHAPTLIIIGEVVTLR 451
>sp|A5DJX5|LIS1_PICGU Nuclear distribution protein PAC1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=PAC1 PE=3 SV=2
Length = 507
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 19 RLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDT 78
R + +L RAI + KI SD +N+E+ EKN V + LV+ +V DVP +
Sbjct: 7 RQQQELNRAIVQY-----IGKIISDNSENLEHGEKNGVLQHQDLVD---KVANLLDVPTS 58
Query: 79 QHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIASIKAQ 126
D+ + +E WS L+ QR KI DE + L I+A+
Sbjct: 59 SE---DLTTNY-LEKKWSTVLRL--QR--KIMDLTDEVSNLKTIIEAK 98
>sp|A4WL93|PFDA_PYRAR Prefoldin subunit alpha OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=pfdA PE=3 SV=1
Length = 136
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 62 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIA 121
LV++G+ ++++ V +T+ + +G G+H A + + +R I+EY+RL
Sbjct: 59 LVHIGAGLFVKG-VFETKEVLTPLGAGYHAFLDLDNAERVLQER-------IEEYSRLKT 110
Query: 122 SIKAQIKLVCE 132
S++ I + E
Sbjct: 111 SLEENIGKLAE 121
>sp|Q9VCZ8|PFD5_DROME Probable prefoldin subunit 5 OS=Drosophila melanogaster GN=CG7048
PE=2 SV=1
Length = 168
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 62 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRL 119
LV L S +Y+ V D +DIG G+++E + + +R + + QI++ ++
Sbjct: 72 LVPLTSSMYVPGRVKDLNRFVIDIGTGYYIEKDLEGSKDYFKRRVEYVQEQIEKIEKI 129
>sp|Q2NER9|GGR3_METST Digeranylgeranylglycerophospholipid reductase 3 OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_1307 PE=3 SV=1
Length = 397
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 4 YRQEKVQKFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNIENLEKNSVTSLRT 61
Y +EK+Q++ +++D L + IA RD ++ DL + I L ++T L T
Sbjct: 319 YSEEKLQEYADYIDSHLGKKFKKYIAIRDVLYNSSD--EDLDEYITALANANITKLST 374
>sp|A4IIJ3|KIBRA_XENTR Protein KIBRA OS=Xenopus tropicalis GN=wwc1 PE=2 SV=1
Length = 1108
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 96 SEALKFISQREDKIARQIDEYTRLIASIKAQIKLV 130
+E LK S+R +++ ++++E TRLIAS++AQ+K +
Sbjct: 393 TERLKMSSKR-NQLVKELEETTRLIASLQAQLKCL 426
>sp|A8F0E8|TILS_RICM5 tRNA(Ile)-lysidine synthase OS=Rickettsia massiliae (strain Mtu5)
GN=tilS PE=3 SV=1
Length = 477
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 11 KFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRK 46
K + ++ LKP+L AIAE K+FE F DL K
Sbjct: 265 KTNKLIENELKPELISAIAEAVKIFEYGFAFLDLVK 300
>sp|Q2JSV9|ATPF_SYNJA ATP synthase subunit b OS=Synechococcus sp. (strain JA-3-3Ab)
GN=atpF PE=3 SV=1
Length = 180
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 2 DSYRQEKVQKFEEFVDRRLKPDLTRAIAERDKVFEQQKIFSDLRKNI 48
++ RQE +Q+ E ++R RA AERD EQ++I +LR+ I
Sbjct: 106 EARRQELLQQAEREIER------LRANAERDLSAEQEQILQELRRQI 146
>sp|Q5HZI1|MTUS1_MOUSE Microtubule-associated tumor suppressor 1 homolog OS=Mus musculus
GN=Mtus1 PE=1 SV=2
Length = 1210
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 45 RKNIENLEKNSVTSLRTLVNLGSEVYMQADVPD 77
R+N ENL+ +L T + S+V MQ D PD
Sbjct: 221 RENFENLQATPSKTLNTTFTVISDVLMQTDSPD 253
>sp|P57742|PFD5_ARATH Probable prefoldin subunit 5 OS=Arabidopsis thaliana GN=At5g23290
PE=1 SV=1
Length = 151
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/66 (21%), Positives = 32/66 (48%)
Query: 60 RTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRL 119
+ LV L + +Y+ + + + VDIG G+ +E T + + ++ + + D+ +
Sbjct: 64 KMLVPLTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEV 123
Query: 120 IASIKA 125
A K+
Sbjct: 124 AAKKKS 129
>sp|Q5JE63|PFDA2_PYRKO Prefoldin subunit alpha 2 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pfdA2 PE=3 SV=1
Length = 142
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 63 VNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQR 105
+ LGS V ++ + + + +D+G G V T EA + I +R
Sbjct: 62 IPLGSGVAIRGKIENPDDVIMDVGAGILVGATVDEARENIEKR 104
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,319,624
Number of Sequences: 539616
Number of extensions: 1728771
Number of successful extensions: 6406
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 6345
Number of HSP's gapped (non-prelim): 83
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)