BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031897
         (151 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1W6J|A Chain A, Structure Of Human Osc In Complex With Ro 48-8071
          Length = 732

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 85/148 (57%), Gaps = 4/148 (2%)

Query: 5   GSQTWDCALAIQALLAC--NLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGG 62
           GSQ WD A AIQALL    +   E    L KAH+FL+ SQV DNP  D++  +R + KGG
Sbjct: 383 GSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPP-DYQKYYRQMRKGG 441

Query: 63  WTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGV 122
           ++FS  D GW VSDCTAEAL   L      P +  E +  ER  DAV  +L++++  GG 
Sbjct: 442 FSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVT-EHIPRERLCDAVAVLLNMRNPDGGF 500

Query: 123 PAWEPTGAPSWLELLNPIEFLDKVIIEH 150
             +E       LELLNP E    ++I++
Sbjct: 501 ATYETKRGGHLLELLNPSEVFGDIMIDY 528


>pdb|1W6K|A Chain A, Structure Of Human Osc In Complex With Lanosterol
          Length = 732

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 85/148 (57%), Gaps = 4/148 (2%)

Query: 5   GSQTWDCALAIQALLAC--NLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGG 62
           GSQ WD A AIQALL    +   E    L KAH+FL+ SQV DNP  D++  +R + KGG
Sbjct: 383 GSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPP-DYQKYYRQMRKGG 441

Query: 63  WTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGV 122
           ++FS  D GW VSDCTAEAL   L      P +  E +  ER  DAV  +L++++  GG 
Sbjct: 442 FSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVT-EHIPRERLCDAVAVLLNMRNPDGGF 500

Query: 123 PAWEPTGAPSWLELLNPIEFLDKVIIEH 150
             +E       LELLNP E    ++I++
Sbjct: 501 ATYETKRGGHLLELLNPSEVFGDIMIDY 528


>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
           Thioredoxin Reductase At 2.9 Angstrom
 pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
           Thioredoxin Reductase At 2.9 Angstrom
          Length = 542

 Score = 30.0 bits (66), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 49  GDFRSMFRHISKG-GWTFSNKDHGWQVSDCTAEALLCCLHFSMM 91
           G   S+F+  SK  GW F N  H W+    T ++ +  L+FS M
Sbjct: 104 GHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYM 147


>pdb|3SQC|A Chain A, Squalene-Hopene Cyclase
 pdb|3SQC|B Chain B, Squalene-Hopene Cyclase
 pdb|3SQC|C Chain C, Squalene-Hopene Cyclase
          Length = 631

 Score = 27.7 bits (60), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 11/143 (7%)

Query: 2   QSFGSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKG 61
           Q+  S  WD  LA+ AL A  L  +    L+KA ++L   Q+T    GD+     ++  G
Sbjct: 305 QASISPVWDTGLAVLALRAAGLPAD-HDRLVKAGEWLLDRQIT--VPGDWAVKRPNLKPG 361

Query: 62  GWTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGG 121
           G+ F   D+ +    C    ++  L+ ++  P+   E+   +        I+ +QS  GG
Sbjct: 362 GFAF-QFDNVYYPDVCDTAVVVWALN-TLRLPD---ERRRRDAMTKGFRWIVGMQSSNGG 416

Query: 122 VPAWEPTGAPSWLELLNPIEFLD 144
              W      +  +L N I F D
Sbjct: 417 ---WGAYDVDNTSDLPNHIPFCD 436


>pdb|1GSZ|A Chain A, Crystal Structure Of A Squalene Cyclase In Complex With
           The Potential Anticholesteremic Drug Ro48-8071
 pdb|1GSZ|B Chain B, Crystal Structure Of A Squalene Cyclase In Complex With
           The Potential Anticholesteremic Drug Ro48-8071
 pdb|1GSZ|C Chain C, Crystal Structure Of A Squalene Cyclase In Complex With
           The Potential Anticholesteremic Drug Ro48-8071
 pdb|1H35|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H35|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H35|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H36|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H36|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H36|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H37|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H37|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H37|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H39|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H39|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H39|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H3A|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H3A|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H3A|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H3B|A Chain A, Squalene-Hopene Cyclase
 pdb|1H3B|B Chain B, Squalene-Hopene Cyclase
 pdb|1H3B|C Chain C, Squalene-Hopene Cyclase
 pdb|1H3C|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H3C|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1H3C|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O6H|A Chain A, Squalene-Hopene Cyclase
 pdb|1O6H|B Chain B, Squalene-Hopene Cyclase
 pdb|1O6H|C Chain C, Squalene-Hopene Cyclase
 pdb|1O6Q|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O6Q|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O6Q|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O6R|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O6R|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O6R|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O79|A Chain A, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O79|B Chain B, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1O79|C Chain C, Structures Of Human Oxidosqualene Cyclase Inhibitors Bound
           To A Homolgous Enzyme
 pdb|1UMP|A Chain A, Geometry Of Triterpene Conversion To Pentacarbocyclic
           Hopene
 pdb|1UMP|B Chain B, Geometry Of Triterpene Conversion To Pentacarbocyclic
           Hopene
 pdb|1UMP|C Chain C, Geometry Of Triterpene Conversion To Pentacarbocyclic
           Hopene
 pdb|1SQC|A Chain A, Squalene-Hopene-Cyclase From Alicyclobacillus
           Acidocaldarius
          Length = 631

 Score = 27.7 bits (60), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 11/143 (7%)

Query: 2   QSFGSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKG 61
           Q+  S  WD  LA+ AL A  L  +    L+KA ++L   Q+T    GD+     ++  G
Sbjct: 305 QASISPVWDTGLAVLALRAAGLPAD-HDRLVKAGEWLLDRQIT--VPGDWAVKRPNLKPG 361

Query: 62  GWTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGG 121
           G+ F   +  +   D TA  +     +++    +  E+   +        I+ +QS  GG
Sbjct: 362 GFAFQFDNVYYPDVDDTAVVV-----WALNTLRLPDERRRRDAMTKGFRWIVGMQSSNGG 416

Query: 122 VPAWEPTGAPSWLELLNPIEFLD 144
              W      +  +L N I F D
Sbjct: 417 ---WGAYDVDNTSDLPNHIPFCD 436


>pdb|2SQC|A Chain A, Squalene-Hopene Cyclase From Alicyclobacillus
           Acidocaldarius
 pdb|2SQC|B Chain B, Squalene-Hopene Cyclase From Alicyclobacillus
           Acidocaldarius
          Length = 631

 Score = 27.3 bits (59), Expect = 3.2,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 11/143 (7%)

Query: 2   QSFGSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKG 61
           Q+  S  WD  LA+ AL A  L  +    L+KA ++L   Q+T    GD+     ++  G
Sbjct: 305 QASISPVWDTGLAVLALRAAGLPAD-HDRLVKAGEWLLDRQIT--VPGDWAVKRPNLKPG 361

Query: 62  GWTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGG 121
           G+ F   D+ +    C    ++  L+ ++  P+   E+   +        I+ +QS  GG
Sbjct: 362 GFAF-QFDNVYYPDVCDTAVVVWALN-TLRLPD---ERRRRDAMTKGFRWIVGMQSSNGG 416

Query: 122 VPAWEPTGAPSWLELLNPIEFLD 144
              W      +  +L N I F D
Sbjct: 417 ---WGAYDVDNTSDLPNHIPFSD 436


>pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human
           Cytosolic Aconitase (Irp1)
 pdb|2B3Y|A Chain A, Structure Of A Monoclinic Crystal Form Of Human Cytosolic
           Aconitase (Irp1)
 pdb|2B3Y|B Chain B, Structure Of A Monoclinic Crystal Form Of Human Cytosolic
           Aconitase (Irp1)
          Length = 888

 Score = 27.3 bits (59), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 71  GWQVSDCTAEALLCCLHFSMMRPEIVGEKM--EPERFYDAVNCILSL 115
           GW V    AEA++     SM+ P+++G ++  +P     + + +L++
Sbjct: 217 GWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTI 263


>pdb|4APO|A Chain A, Aip Tpr Domain In Complex With Human Tomm20 Peptide
 pdb|4APO|B Chain B, Aip Tpr Domain In Complex With Human Tomm20 Peptide
          Length = 165

 Score = 27.3 bits (59), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 7/33 (21%)

Query: 104 RFYDAVNCILSLQSETGGVPAWEPTGAPSWLEL 136
           ++YDA+ C+ +LQ +       E  G+P W++L
Sbjct: 36  KYYDAIACLKNLQMK-------EQPGSPEWIQL 61


>pdb|4AIF|A Chain A, Aip Tpr Domain In Complex With Human Hsp90 Peptide
 pdb|4AIF|B Chain B, Aip Tpr Domain In Complex With Human Hsp90 Peptide
          Length = 144

 Score = 26.9 bits (58), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 7/33 (21%)

Query: 104 RFYDAVNCILSLQSETGGVPAWEPTGAPSWLEL 136
           ++YDA+ C+ +LQ +       E  G+P W++L
Sbjct: 30  KYYDAIACLKNLQMK-------EQPGSPEWIQL 55


>pdb|1US2|A Chain A, Xylanase10c (Mutant E385a) From Cellvibrio Japonicus In
           Complex With Xylopentaose
          Length = 530

 Score = 26.9 bits (58), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 101 EPERFYDAVNCILSLQ--SETGGVPAWEPTGAPSWLELLNPIEFLDKVI 147
           + +R+ D V   L     ++ GG+  W  T A +WL+ L   +F D+ I
Sbjct: 442 QKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLDGLYREQFEDEKI 490


>pdb|1US3|A Chain A, Native Xylanase10c From Cellvibrio Japonicus
          Length = 530

 Score = 26.6 bits (57), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 101 EPERFYDAVNCILSLQ--SETGGVPAWEPTGAPSWLELLNPIEFLDKVI 147
           + +R+ D V   L     ++ GG+  W  T A +WL+ L   +F D+ I
Sbjct: 442 QKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLDGLYREQFEDEKI 490


>pdb|3Q41|A Chain A, Crystal Structure Of The Glun1 N-Terminal Domain (Ntd)
 pdb|3Q41|B Chain B, Crystal Structure Of The Glun1 N-Terminal Domain (Ntd)
 pdb|3Q41|C Chain C, Crystal Structure Of The Glun1 N-Terminal Domain (Ntd)
          Length = 384

 Score = 26.6 bits (57), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query: 20  ACNLTDEIGPILMKAHDFLKASQVTDNPQG 49
           + +++D +G +    H+ L+   +TD P+G
Sbjct: 258 SAHISDAVGVVAQAVHELLEKENITDPPRG 287


>pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
           With Mannotriose Substrate
 pdb|3AOF|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
           With Mannotriose Substrate
          Length = 317

 Score = 26.2 bits (56), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 94  EIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPTGAPSW-------LELLNPIEF 142
           E++ E ++  R  D  + I+   +E GG+ A E    P W       +   NP EF
Sbjct: 148 ELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEF 203


>pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
           With Cellobiose Substrate, Mutant Form
 pdb|3AMG|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
           With Cellobiose Substrate, Mutant Form
          Length = 317

 Score = 26.2 bits (56), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 94  EIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPTGAPSW-------LELLNPIEF 142
           E++ E ++  R  D  + I+   +E GG+ A E    P W       +   NP EF
Sbjct: 148 ELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEF 203


>pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellobiose
 pdb|3AZR|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellobiose
 pdb|3AZS|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Mannotriose
 pdb|3AZS|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Mannotriose
 pdb|3AZT|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellotetraose
 pdb|3AZT|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellotetraose
 pdb|3AZT|C Chain C, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellotetraose
 pdb|3AZT|D Chain D, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellotetraose
          Length = 317

 Score = 26.2 bits (56), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 94  EIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPTGAPSW-------LELLNPIEF 142
           E++ E ++  R  D  + I+   +E GG+ A E    P W       +   NP EF
Sbjct: 148 ELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEF 203


>pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|B Chain B, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|C Chain C, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|D Chain D, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|E Chain E, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|F Chain F, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|G Chain G, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|H Chain H, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMW|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMW|B Chain B, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMW|C Chain C, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMW|D Chain D, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3AMC|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And DimerAU
 pdb|3AMC|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And DimerAU
 pdb|3AMD|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And TetramerAU
 pdb|3AMD|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And TetramerAU
 pdb|3AMD|C Chain C, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And TetramerAU
 pdb|3AMD|D Chain D, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And TetramerAU
          Length = 317

 Score = 26.2 bits (56), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 94  EIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPTGAPSW-------LELLNPIEF 142
           E++ E ++  R  D  + I+   +E GG+ A E    P W       +   NP EF
Sbjct: 148 ELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEF 203


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.321    0.136    0.442 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,753,680
Number of Sequences: 62578
Number of extensions: 183509
Number of successful extensions: 458
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 444
Number of HSP's gapped (non-prelim): 19
length of query: 151
length of database: 14,973,337
effective HSP length: 90
effective length of query: 61
effective length of database: 9,341,317
effective search space: 569820337
effective search space used: 569820337
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)