Query 031897
Match_columns 151
No_of_seqs 104 out of 1035
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 10:44:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031897.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031897hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w6ka1 a.102.4.2 (A:6-99,A:37 100.0 1E-39 7.5E-44 278.0 13.6 149 1-151 94-245 (448)
2 d2sqca1 a.102.4.2 (A:8-36,A:30 100.0 6.4E-33 4.7E-37 228.7 10.6 140 1-150 26-165 (352)
3 d2sqca1 a.102.4.2 (A:8-36,A:30 99.7 1.2E-16 8.7E-21 130.6 10.5 103 5-124 213-315 (352)
4 d1w6ka1 a.102.4.2 (A:6-99,A:37 99.6 4.7E-16 3.4E-20 131.2 9.2 104 7-126 301-407 (448)
5 d1gxma_ a.102.5.1 (A:) Polygal 99.3 3.6E-13 2.6E-17 109.0 5.8 63 74-141 64-126 (324)
6 d2sqca2 a.102.4.2 (A:37-307) S 99.1 1.7E-10 1.2E-14 90.7 9.7 84 10-120 6-89 (271)
7 d1r76a_ a.102.5.1 (A:) Polygal 98.8 5.3E-09 3.8E-13 86.6 9.2 109 28-141 80-212 (408)
8 d1r76a_ a.102.5.1 (A:) Polygal 98.5 1.7E-08 1.3E-12 83.4 4.0 103 10-122 150-264 (408)
9 d3dssb1 a.102.4.3 (B:7-331) Ra 98.5 7E-08 5.1E-12 77.4 6.8 93 5-125 86-178 (325)
10 d1gxma_ a.102.5.1 (A:) Polygal 98.4 1.8E-07 1.3E-11 75.1 5.8 102 11-122 68-180 (324)
11 d1w6ka2 a.102.4.2 (A:100-378) 98.4 6.8E-07 5E-11 70.3 8.7 79 11-115 6-84 (279)
12 d2sqca2 a.102.4.2 (A:37-307) S 98.3 7.7E-07 5.6E-11 69.3 8.0 84 8-123 181-267 (271)
13 d2h6fb1 a.102.4.3 (B:521-921) 98.2 3.6E-07 2.6E-11 75.3 4.2 95 5-125 127-222 (401)
14 d2h6fb1 a.102.4.3 (B:521-921) 98.2 4.8E-06 3.5E-10 68.4 10.4 97 5-125 78-174 (401)
15 d3dssb1 a.102.4.3 (B:7-331) Ra 98.1 2.7E-06 2E-10 67.8 6.2 91 5-123 134-224 (325)
16 d1n4qb_ a.102.4.3 (B:) Protein 97.9 1.5E-05 1.1E-09 64.2 7.7 94 6-125 103-196 (346)
17 d1hzfa_ a.102.4.4 (A:) C4adg f 97.4 0.0005 3.6E-08 52.9 9.8 76 29-127 52-127 (326)
18 d1c3da_ a.102.4.4 (A:) C3D, a 97.3 0.00046 3.4E-08 52.1 8.2 39 75-124 237-275 (294)
19 d1hzfa_ a.102.4.4 (A:) C4adg f 96.9 0.0012 8.7E-08 50.7 7.7 42 74-125 266-307 (326)
20 d1ulva1 a.102.1.5 (A:274-686) 96.9 0.0012 8.6E-08 52.7 7.6 91 8-116 58-148 (413)
21 d1w6ka2 a.102.4.2 (A:100-378) 96.8 0.0006 4.4E-08 53.1 4.6 31 97-127 17-47 (279)
22 d1c3da_ a.102.4.4 (A:) C3D, a 96.7 0.004 2.9E-07 46.6 8.7 75 29-125 54-128 (294)
23 d1lf6a1 a.102.1.5 (A:288-684) 96.5 0.0023 1.7E-07 50.5 6.5 88 9-117 56-143 (397)
24 d1n4qb_ a.102.4.3 (B:) Protein 96.0 0.0058 4.2E-07 48.6 6.1 93 5-123 152-244 (346)
25 d1fp3a_ a.102.1.3 (A:) N-acyl- 92.3 0.073 5.3E-06 41.6 4.8 102 8-125 55-169 (402)
26 d1lf6a1 a.102.1.5 (A:288-684) 89.1 0.68 4.9E-05 35.5 7.8 82 27-125 7-94 (397)
27 d1ulva1 a.102.1.5 (A:274-686) 86.2 1.6 0.00011 33.7 8.4 85 23-124 5-97 (413)
28 d1vg5a_ a.5.2.1 (A:) Rhomboid 83.9 0.49 3.6E-05 28.8 3.4 26 13-44 45-70 (73)
29 d1wiva_ a.5.2.1 (A:) Ubiquitin 82.4 0.82 6E-05 27.7 4.0 15 31-45 57-71 (73)
30 d1ia6a_ a.102.1.2 (A:) Nonproc 81.6 0.9 6.6E-05 35.9 5.1 22 101-122 94-115 (431)
31 d1wjia_ a.5.2.1 (A:) Tudor dom 81.4 1.1 7.7E-05 26.3 4.1 30 10-45 22-51 (63)
32 d1nc5a_ a.102.1.6 (A:) Hypothe 80.6 3.2 0.00024 31.3 8.0 47 78-124 205-253 (363)
33 d2d5ja1 a.102.1.7 (A:1-377) Un 78.3 0.82 6E-05 35.5 3.7 107 10-123 149-264 (377)
34 d2afaa1 a.102.1.3 (A:4-415) Pu 77.0 3.5 0.00026 31.8 7.2 102 7-123 48-154 (411)
35 d1wgna_ a.5.2.1 (A:) Ubiquitin 75.0 1.6 0.00012 25.6 3.5 26 13-44 35-60 (63)
36 d2crna1 a.5.2.1 (A:8-58) Suppr 74.0 2.5 0.00018 23.6 4.1 28 12-44 17-44 (51)
37 d1nc5a_ a.102.1.6 (A:) Hypothe 72.3 5.1 0.00037 30.1 7.0 91 11-114 205-303 (363)
38 d1ks8a_ a.102.1.2 (A:) Endo-b- 70.9 1.9 0.00014 33.9 4.2 96 25-122 3-113 (433)
39 d2cpwa1 a.5.2.1 (A:8-58) Cbl-i 69.9 2.1 0.00015 24.0 3.1 11 31-41 41-51 (51)
40 d1g87a1 a.102.1.2 (A:3-456) En 69.0 2.4 0.00017 33.6 4.4 22 101-122 91-112 (454)
41 d1vg5a_ a.5.2.1 (A:) Rhomboid 68.3 3.6 0.00026 24.6 4.2 15 105-119 57-71 (73)
42 d1qaza_ a.102.3.1 (A:) Alginat 68.2 2.9 0.00021 32.1 4.7 93 7-115 187-285 (351)
43 d1whca_ a.5.2.1 (A:) UBA/UBX 3 67.1 4.1 0.0003 23.7 4.1 27 13-44 25-51 (64)
44 d1veka_ a.5.2.1 (A:) Ubiquitin 62.0 5.7 0.00042 24.3 4.3 14 31-44 58-71 (84)
45 d2jg0a1 a.102.1.9 (A:37-547) P 56.8 25 0.0018 27.7 8.6 33 8-44 122-154 (511)
46 d1oqya1 a.5.2.1 (A:160-200) DN 55.2 1.8 0.00013 23.2 0.8 9 31-39 32-40 (41)
47 d2dnaa1 a.5.2.1 (A:12-61) Ubiq 54.3 7.8 0.00057 21.5 3.5 27 10-42 22-48 (50)
48 d2d5ja1 a.102.1.7 (A:1-377) Un 53.1 11 0.00081 28.7 5.6 68 10-90 222-294 (377)
49 d1gaia_ a.102.1.1 (A:) Glucoam 51.9 8.8 0.00064 30.4 4.9 110 8-126 53-178 (472)
50 d1tf4a1 a.102.1.2 (A:1-460) En 50.4 6 0.00044 31.1 3.7 21 102-122 94-114 (460)
51 d1fp3a_ a.102.1.3 (A:) N-acyl- 50.3 6.4 0.00047 29.8 3.7 42 78-123 316-359 (402)
52 d1rk8c_ b.72.3.1 (C:) Pym (Wit 38.7 1.3 9.3E-05 22.5 -1.5 14 111-124 10-23 (33)
53 d2daha1 a.5.2.1 (A:8-48) Ubiqu 34.4 24 0.0018 18.5 3.4 25 10-40 16-40 (41)
54 d2k0bx1 a.5.2.1 (X:1-52) Seque 32.4 18 0.0013 20.1 2.7 28 22-51 1-28 (52)
55 d2cosa1 a.5.2.1 (A:8-48) Serin 32.0 14 0.001 19.3 2.0 26 10-40 15-40 (41)
56 d2bwba1 a.5.2.1 (A:328-371) DS 29.7 27 0.002 18.6 3.1 25 10-40 19-43 (44)
57 d2afaa1 a.102.1.3 (A:4-415) Pu 29.1 1E+02 0.0076 22.8 8.1 44 78-125 317-362 (411)
58 d1aipc1 a.5.2.2 (C:2-53) Elong 28.7 26 0.0019 19.4 3.0 20 15-40 21-40 (52)
59 d1efub3 a.5.2.2 (B:1-54) Elong 26.4 29 0.0021 19.3 3.0 19 16-40 24-42 (54)
60 d1xb2b1 a.5.2.2 (B:56-111) Elo 25.9 30 0.0022 19.4 3.0 21 15-41 23-43 (56)
61 d1o5ia_ c.2.1.2 (A:) beta-keto 25.7 30 0.0022 23.9 3.7 30 97-126 195-233 (234)
62 d1wj7a1 a.5.2.1 (A:8-98) Ubiqu 25.5 65 0.0048 19.7 4.8 37 79-128 48-84 (91)
63 d1veja1 a.5.2.1 (A:8-68) 49314 25.1 38 0.0027 19.3 3.3 25 10-40 36-60 (61)
64 d1clca1 a.102.1.2 (A:135-575) 24.3 17 0.0013 28.1 2.2 24 102-125 111-134 (441)
65 d1ks8a_ a.102.1.2 (A:) Endo-b- 22.8 19 0.0014 27.7 2.3 69 27-115 273-341 (433)
66 d1ctja_ a.3.1.1 (A:) Cytochrom 20.9 30 0.0022 19.8 2.5 24 97-120 65-88 (89)
No 1
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1e-39 Score=277.99 Aligned_cols=149 Identities=44% Similarity=0.696 Sum_probs=135.4
Q ss_pred CCcC-CCChhHHHHHHHHHHHcCC--CCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccc
Q 031897 1 MQSF-GSQTWDCALAIQALLACNL--TDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDC 77 (151)
Q Consensus 1 ~q~~-~~~~wdTala~~AL~~~G~--~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~ 77 (151)
+|+| +||||||+|+++||+++|. .+++++.|+||++||+.+|+.++ .|+|.+.+++.++|||+|++.+++|||+||
T Consensus 94 ~~~~~~S~vWDTal~~~AL~~ag~~~~~~~~~~l~kA~~wL~~~Q~~~~-~gd~~~~~~~~~~GGW~f~~~n~~~Pd~Dd 172 (448)
T d1w6ka1 94 GQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDN-PPDYQKYYRQMRKGGFSFSTLDCGWIVSDC 172 (448)
T ss_dssp CCSSSCCHHHHHHHHHHHHHHTTGGGCGGGHHHHHHHHHHHHHHSCCCC-CTTGGGGTCCCCTTCCBSSCTTTCCBCHHH
T ss_pred cCCCCCCChHHHHHHHHHHHHhCCCCCccchHHHHHHHHHHHhhccCcC-CCcchhhcCCCCCCceeCCcCCCCCCCCcc
Confidence 4677 8999999999999999995 34578999999999999999864 589999999999999999999999999999
Q ss_pred hHHHHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCccccCCCCcchhhhccChhhhhhccccccC
Q 031897 78 TAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPTGAPSWLELLNPIEFLDKVIIEHE 151 (151)
Q Consensus 78 Ta~al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~~~~~~~~~l~~~~~~~~f~~~~~d~~ 151 (151)
||+||+||+.+.+..+ ..+.++.+++|.+||+||++|||+||||++|+++++..|||++||++.|+++|+|++
T Consensus 173 TA~~l~al~~~~~~~~-~~~~~~~~~~i~~av~wLl~mQn~dGGw~afd~~~~~~~l~~~~~~~~~~~~~~D~s 245 (448)
T d1w6ka1 173 TAEALKAVLLLQEKCP-HVTEHIPRERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYT 245 (448)
T ss_dssp HHHHHHHHHHHHHHCT-TCCSCCCHHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGCCCSSCSSCSSCCC
T ss_pred HHHHHHHHHHHhccCc-cccccccHHHHHHHHHHHHHhcCCCCCeeeccCCCChhhhhcccchhhhhccccCCC
Confidence 9999999998765332 346677899999999999999999999999999999999999999999999999975
No 2
>d2sqca1 a.102.4.2 (A:8-36,A:308-630) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=99.98 E-value=6.4e-33 Score=228.74 Aligned_cols=140 Identities=21% Similarity=0.301 Sum_probs=123.8
Q ss_pred CCcCCCChhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHH
Q 031897 1 MQSFGSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAE 80 (151)
Q Consensus 1 ~q~~~~~~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~ 80 (151)
+|+++|++|||+|+++||+++|++++ .+.|+||++||+++|+.+ +|+|...+++.++|||+|++.++++||.|||+.
T Consensus 26 ~~~~~s~vwdTala~~Al~eaG~~~~-~~~l~ka~~~L~~~Q~~~--~gd~~~~~~~~~~Ggw~~s~~~~~~p~~d~Ta~ 102 (352)
T d2sqca1 26 WGPLISPVWDTGLAVLALRAAGLPAD-HDRLVKAGEWLLDRQITV--PGDWAVKRPNLKPGGFAFQFDNVYYPDVCDTAV 102 (352)
T ss_dssp CCCECCHHHHHHHHHHHHHHTTCCTT-CHHHHHHHHHHHHTCCCS--CCGGGGTCTTSCCCCBCSSSSCTTCCBHHHHHH
T ss_pred eCCCCCcHHHHHHHHHHHHHcCCCCC-cHHHHHHHHHHHHhcCCC--CCChhhhcCCCCCCccccccCCCCCCccccHHH
Confidence 47779999999999999999999887 689999999999999875 689999999999999999999999999999999
Q ss_pred HHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCccccCCCCcchhhhccChhhhhhcccccc
Q 031897 81 ALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPTGAPSWLELLNPIEFLDKVIIEH 150 (151)
Q Consensus 81 al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~~~~~~~~~l~~~~~~~~f~~~~~d~ 150 (151)
+|++|..+.. + ++.+..++|++||+||+++||+||||++|++.++..|++++|+.+ |+++ +|+
T Consensus 103 ~l~aL~~~~~-~----~~~~~~~ai~~av~~Lls~Qn~dGGw~~~~~~~~~~~~~~~~~~~-~~~~-~d~ 165 (352)
T d2sqca1 103 VVWALNTLRL-P----DERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFSD-FGEV-TDP 165 (352)
T ss_dssp HHHHHTTCCC-S----CHHHHHHHHHHHHHHHHHTCCTTSCBCSSCSSCCCSGGGGSTTCS-SSCS-SCC
T ss_pred HHHhhhhhcC-C----chhhHHHHHHHHHHHHHHhhcCCCCcccccccCccchhhccchhh-hhhc-cCC
Confidence 9999988743 1 223457899999999999999999999999999999999997665 6664 444
No 3
>d2sqca1 a.102.4.2 (A:8-36,A:308-630) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=99.67 E-value=1.2e-16 Score=130.62 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=83.3
Q ss_pred CCChhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHH
Q 031897 5 GSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLC 84 (151)
Q Consensus 5 ~~~~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~a 84 (151)
.+.++.|++++.+|..+|.+.+ ++.|+||++||+++|++ +|+|++.+.....+.+ ...+.+++..|++||+|
T Consensus 213 ~~~~y~t~~~l~aL~~~g~~~~-~~~v~ka~~~L~~~Q~~---dGgWg~~~~~~~~~~~----~~~~~s~~~~Ta~al~a 284 (352)
T d2sqca1 213 VNYLYGTGAVVSALKAVGIDTR-EPYIQKALDWVEQHQNP---DGGWGEDCRSYEDPAY----AGKGASTPSQTAWALMA 284 (352)
T ss_dssp SSHHHHHHHHHHHHHHTTCCTT-SHHHHHHHHHHHHTCCT---TSCCCCCGGGGTCGGG----TTCSSCCHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHhcccccc-hHHHHHHHHHHHhccCC---CCCcccCcccccCccc----CCCCCCcHHHHHHHHHH
Confidence 4557899999999999998766 89999999999999998 6888765443333332 23345678899999999
Q ss_pred HHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCccc
Q 031897 85 CLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPA 124 (151)
Q Consensus 85 L~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~ 124 (151)
|+.+.. ...++++|||+||++.|++||||..
T Consensus 285 L~~a~~---------~~~~~i~ra~~~L~~~Q~~dG~w~~ 315 (352)
T d2sqca1 285 LIAGGR---------AESEAARRGVQYLVETQRPDGGWDE 315 (352)
T ss_dssp HHHTTC---------SSSHHHHHHHHHHHHHCCTTSCCCC
T ss_pred HHhcCC---------CCcHHHHHHHHHHHHhcCCCCCCCC
Confidence 998752 2568899999999999999999984
No 4
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.7e-16 Score=131.21 Aligned_cols=104 Identities=18% Similarity=0.191 Sum_probs=81.1
Q ss_pred ChhHHHHHHHHHHHcCCCCC---ccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHH
Q 031897 7 QTWDCALAIQALLACNLTDE---IGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALL 83 (151)
Q Consensus 7 ~~wdTala~~AL~~~G~~~~---~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~ 83 (151)
.++.|++++.||.++|...+ +.+.|+||++||+++|++ +|+|.+......... +...+.+++..||+||+
T Consensus 301 ~~ygT~~al~aL~~~G~~~~~~~~~~~v~ka~~wLls~Q~~---DGGWge~~~s~~~~~----~~~~~~s~~~~TAwAl~ 373 (448)
T d1w6ka1 301 FTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLLSRQMA---DGGWGEDFESCEERR----YVQSAQSQIHNTCWAMM 373 (448)
T ss_dssp HHHHHHHHHHHHHHTTCCCBTTBCCHHHHHHHHHHHTTCCT---TSCCCBCTHHHHHTS----CCBCSSCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhCcCcccccccHHHHHHHHHHHhccCC---CCCccCCCccccCcc----cCCCCCCcHHHHHHHHH
Confidence 57889999999999998643 568999999999999998 688865422111111 12234577889999999
Q ss_pred HHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCccccC
Q 031897 84 CCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAWE 126 (151)
Q Consensus 84 aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~~ 126 (151)
||+++++ ...++++|||+||++.|++||+|+.-.
T Consensus 374 aL~~ag~---------~~~~~v~rgv~~L~~~Q~~~G~W~~~~ 407 (448)
T d1w6ka1 374 GLMAVRH---------PDIEAQERGVRCLLEKQLPNGDWPQEN 407 (448)
T ss_dssp HHHHTTC---------SCHHHHHHHHHHHHHHCCTTSCCCCCS
T ss_pred HHHhcCC---------CCcHHHHHHHHHHHHccCCCCCCCCCc
Confidence 9998752 368999999999999999999998544
No 5
>d1gxma_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Cellvibrio cellulosa [TaxId: 155077]}
Probab=99.34 E-value=3.6e-13 Score=109.01 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=48.9
Q ss_pred cccchHHHHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCccccCCCCcchhhhccChhh
Q 031897 74 VSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPTGAPSWLELLNPIE 141 (151)
Q Consensus 74 d~d~Ta~al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~~~~~~~~~l~~~~~~~ 141 (151)
|.+.|..+|+.|.++... .+.+...++++||++||+.+|++||||+.|.+.+. .++++|+|.+
T Consensus 64 Dn~AT~~~i~~La~~~~~----~~d~~~~~A~~Rgi~~LL~~Q~~nGGWpqf~P~~~-~y~~~ItFND 126 (324)
T d1gxma_ 64 DNGATITEMVFLAEVYKS----GGNTKYRDAVRKAANFLVNSQYSTGALPQFYPLKG-GYSDHATFND 126 (324)
T ss_dssp GGGTTHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHCCTTSCCBSEESCCS-GGGGSEECGG
T ss_pred cChHHHHHHHHHHHHHHh----cCChhHHHHHHHHHHHHHhhccCCCCccccccCCC-CcccccCCCc
Confidence 566677778888776432 23445678999999999999999999999987766 4778996544
No 6
>d2sqca2 a.102.4.2 (A:37-307) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=99.10 E-value=1.7e-10 Score=90.68 Aligned_cols=84 Identities=18% Similarity=0.104 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHHHHhc
Q 031897 10 DCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCCLHFS 89 (151)
Q Consensus 10 dTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~~~~ 89 (151)
-||-.+.+|...|.. + ++.++|+++||+++|++ + |||++.. .+++++++|+.++.||..++
T Consensus 6 ~~a~~i~~~~~~g~~-~-~~~~~~~~~~l~~~Q~~---d------------GgW~~~~--~~~~~~~~T~~~~~AL~~~g 66 (271)
T d2sqca2 6 MEAEYVLLCHILDRV-D-RDRMEKIRRYLLHEQRE---D------------GTWALYP--GGPPDLDTTIEAYVALKYIG 66 (271)
T ss_dssp HHHHHHHHHHHTTCC-C-HHHHHHHHHHHHHHSCT---T------------SCCCSST--TCCCCHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHhCCC-C-HHHHHHHHHHHHHccCC---C------------CCccCCC--CCCCcHHHHHHHHHHHHHhC
Confidence 478889999999964 4 68899999999999998 3 5666533 34789999999999998875
Q ss_pred cCCccccCCCCCHHHHHHHHHHHHhcccCCC
Q 031897 90 MMRPEIVGEKMEPERFYDAVNCILSLQSETG 120 (151)
Q Consensus 90 ~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dG 120 (151)
...++++++||.+||++++...+
T Consensus 67 --------~~~~~~~~~ra~~~i~~~GG~~~ 89 (271)
T d2sqca2 67 --------MSRDEEPMQKALRFIQSQGGIES 89 (271)
T ss_dssp --------CCTTSHHHHHHHHHHHHTTCGGG
T ss_pred --------CCCchHHHHHHHHHHHHcCCccc
Confidence 34578999999999999954443
No 7
>d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]}
Probab=98.83 E-value=5.3e-09 Score=86.59 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=73.0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCcccccCC---------CCCccccc---------------cCCCCCcccccchHHHHH
Q 031897 28 GPILMKAHDFLKASQVTDNPQGDFRSMFRH---------ISKGGWTF---------------SNKDHGWQVSDCTAEALL 83 (151)
Q Consensus 28 ~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~---------~~~GgW~f---------------s~~~~~~pd~d~Ta~al~ 83 (151)
.+.-++.++.|+.-|.+ +|+|...... ...+++.- ...+.+..|.+.|..+|+
T Consensus 80 s~eA~~iAd~lL~~Q~p---~GGWpKn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TiDN~aTt~el~ 156 (408)
T d1r76a_ 80 SKAARHVADVIVSFQTP---AGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIR 156 (408)
T ss_dssp SHHHHHHHHHHHHHCCT---TSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHH
T ss_pred CHHHHHHHHHHHHhccc---CCCCCCccccccccccchhhhhhhccccccccchhhhhhhhhhcccCCCcCcchHHHHHH
Confidence 45678899999999999 6999642110 01111110 011223468889999999
Q ss_pred HHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCccccCCCCcchhhhccChhh
Q 031897 84 CCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPTGAPSWLELLNPIE 141 (151)
Q Consensus 84 aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~~~~~~~~~l~~~~~~~ 141 (151)
.|+++.....+ ...+...+++++|++||+.+|++||||+.|.+ +...+++++.+-+
T Consensus 157 ~La~~~~~~~~-~~~~~y~~a~~~~~~~ll~~Q~~~Ggwpqf~p-~~~~Y~~~ItfND 212 (408)
T d1r76a_ 157 FLAQVVSQLAP-EEAAPYRDAALKGIEYLLASQFPNGGWPQVWP-LEGGYHDAITYND 212 (408)
T ss_dssp HHHHHHHHSCG-GGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSS-CCCGGGGSEECGG
T ss_pred HHHHHHHHcCc-ccchhHHHHHHHHHHHHHHhhCCCCCccccCC-CCcccccccccCc
Confidence 99988532110 01123577999999999999999999999985 4566888884433
No 8
>d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]}
Probab=98.55 E-value=1.7e-08 Score=83.41 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHc----CCC--CCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCcccc-ccCCCCCcccccchHHHH
Q 031897 10 DCALAIQALLAC----NLT--DEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWT-FSNKDHGWQVSDCTAEAL 82 (151)
Q Consensus 10 dTala~~AL~~~----G~~--~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~-fs~~~~~~pd~d~Ta~al 82 (151)
+|+-.+++|+.. +.. +.|...+.||++||++.|.+ +|+|...|+. .+++. +-+ +-| |.+..+|
T Consensus 150 aTt~el~~La~~~~~~~~~~~~~y~~a~~~~~~~ll~~Q~~---~Ggwpqf~p~--~~~Y~~~It----fND-~~m~~~l 219 (408)
T d1r76a_ 150 ATVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFP---NGGWPQVWPL--EGGYHDAIT----YND-DALVHVA 219 (408)
T ss_dssp TTHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCT---TSCCBSBSSC--CCGGGGSEE----CGG-GHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCcccchhHHHHHHHHHHHHHHhhCC---CCCccccCCC--Ccccccccc----cCc-hHHHHHH
Confidence 478888888765 211 12788999999999999999 6899866532 23321 111 111 3567778
Q ss_pred HHHHHhccCCccc--cCC---CCCHHHHHHHHHHHHhcccCCCCc
Q 031897 83 LCCLHFSMMRPEI--VGE---KMEPERFYDAVNCILSLQSETGGV 122 (151)
Q Consensus 83 ~aL~~~~~~~~~~--~g~---~~~~~~l~rav~~Ll~~Qn~dGGW 122 (151)
..|..+.+..... +.. .....+++|||+||+..|.++|||
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~r~r~~~a~~rgi~~ll~~Q~~~gg~ 264 (408)
T d1r76a_ 220 ELLSDIAAGRDGFGFVPPAIRTRALEATNAAIHCIVETQVVQDGK 264 (408)
T ss_dssp HHHHHHHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTE
T ss_pred HHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 7777765432110 000 123579999999999999999997
No 9
>d3dssb1 a.102.4.3 (B:7-331) Rab geranylgeranyltransferase, beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.52 E-value=7e-08 Score=77.35 Aligned_cols=93 Identities=15% Similarity=0.075 Sum_probs=67.9
Q ss_pred CCChhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHH
Q 031897 5 GSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLC 84 (151)
Q Consensus 5 ~~~~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~a 84 (151)
.+++..|-.|+.+|+..+... ....++.++||++.|.+ +|+|. .+ ..+.+|+--|-.|+.+
T Consensus 86 ~~~l~~T~~al~~L~l~~~~~--~~dr~~i~~~L~s~Q~~---DGsf~------------~~--~~~e~D~r~ty~Al~~ 146 (325)
T d3dssb1 86 DPHLLYTLSAVQILTLYDSIH--VINVDKVVAYVQSLQKE---DGSFA------------GD--IWGEIDTRFSFCAVAT 146 (325)
T ss_dssp CBCHHHHHHHHHHHHHTTCGG--GSCHHHHHHHHHHTBCT---TSCBB------------SS--TTCCBCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhhcccc--ccCHHHHHHHHHHhhCc---CCCCc------------cC--CCCCccHHHHHHHHHH
Confidence 477899999999998876432 23468999999999998 56654 11 1123455557778777
Q ss_pred HHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCcccc
Q 031897 85 CLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAW 125 (151)
Q Consensus 85 L~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~ 125 (151)
|..+.. ...+.++++++||+++||.||||+.-
T Consensus 147 l~ll~~---------~~~~~~~~~~~~i~scQn~DGGfg~~ 178 (325)
T d3dssb1 147 LALLGK---------LDAINVEKAIEFVLSCMNFDGGFGCR 178 (325)
T ss_dssp HHHHTC---------GGGSCHHHHHHHHHTTBCTTSCBCSS
T ss_pred HHHcCC---------CchhhHHHHHHHHHHhcCCcCCcccc
Confidence 777642 13455789999999999999999864
No 10
>d1gxma_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Cellvibrio cellulosa [TaxId: 155077]}
Probab=98.38 E-value=1.8e-07 Score=75.09 Aligned_cols=102 Identities=22% Similarity=0.161 Sum_probs=61.2
Q ss_pred HHHHHHHHHHcC---CCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccc-hHHHHHHHH
Q 031897 11 CALAIQALLACN---LTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDC-TAEALLCCL 86 (151)
Q Consensus 11 Tala~~AL~~~G---~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~-Ta~al~aL~ 86 (151)
|.-+++.|+... .++.|+..++||++||++.|.+ +|+|...|+.. +++ . ++ .|=.|+ +..+|..|.
T Consensus 68 T~~~i~~La~~~~~~~d~~~~~A~~Rgi~~LL~~Q~~---nGGWpqf~P~~--~~y--~--~~-ItFND~am~~vl~lL~ 137 (324)
T d1gxma_ 68 TITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYS---TGALPQFYPLK--GGY--S--DH-ATFNDNGMAYALTVLD 137 (324)
T ss_dssp THHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCT---TSCCBSEESCC--SGG--G--GS-EECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhhccC---CCCccccccCC--CCc--c--cc-cCCCcHHHHHHHHHhc
Confidence 444455554432 2334789999999999999999 69998766532 221 1 11 121222 344444443
Q ss_pred HhccC--Cc-----cccCCCCCHHHHHHHHHHHHhcccCCCCc
Q 031897 87 HFSMM--RP-----EIVGEKMEPERFYDAVNCILSLQSETGGV 122 (151)
Q Consensus 87 ~~~~~--~~-----~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW 122 (151)
..... +. ...++.....+++|||+||++.|-++|||
T Consensus 138 ~~a~~~~~~~~~~~~~~~r~r~~~A~~Rgi~~lL~~Q~~~gg~ 180 (324)
T d1gxma_ 138 FAANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQWKQNGV 180 (324)
T ss_dssp HHHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTE
T ss_pred hhhccccchhHHHhhhhhhHhHHHHHHHHHHHHHHhhcccCCC
Confidence 33221 10 01122335678999999999999999997
No 11
>d1w6ka2 a.102.4.2 (A:100-378) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36 E-value=6.8e-07 Score=70.34 Aligned_cols=79 Identities=11% Similarity=0.060 Sum_probs=61.9
Q ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHHHHhcc
Q 031897 11 CALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCCLHFSM 90 (151)
Q Consensus 11 Tala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~~~~~ 90 (151)
|---++||.-.|..-+ ++..+++++||.++|++ + |||+.-. .+.+++.+|+.+..||..++
T Consensus 6 ~p~~Vial~i~g~~~~-~e~~~e~~ryL~~~Q~~---D------------GgWg~~~--~g~s~i~~T~~ay~ALrl~G- 66 (279)
T d1w6ka2 6 LPGLLITCHVARIPLP-AGYREEIVRYLRSVQLP---D------------GGWGLHI--EDKSTVFGTALNYVSLRILG- 66 (279)
T ss_dssp HHHHHHHHHHHTCCCC-TTHHHHHHHHHHHHSCT---T------------SCBCSBT--TSCCBHHHHHHHHHHHHHTT-
T ss_pred hhHHHHHHhhcCCCCC-HHHHHHHHHHHHHhhcC---C------------CCccCCC--CCCccHHHHHHHHHHHHHhC-
Confidence 4455788888887544 57889999999999998 4 4555322 34578999999999999875
Q ss_pred CCccccCCCCCHHHHHHHHHHHHhc
Q 031897 91 MRPEIVGEKMEPERFYDAVNCILSL 115 (151)
Q Consensus 91 ~~~~~~g~~~~~~~l~rav~~Ll~~ 115 (151)
.+.+.++++||.+||++.
T Consensus 67 -------~~~~~p~m~rAr~wI~~~ 84 (279)
T d1w6ka2 67 -------VGPDDPDLVRARNILHKK 84 (279)
T ss_dssp -------CCTTSHHHHHHHHHHHHT
T ss_pred -------CCCCcHHHHHHHHHHHhC
Confidence 355789999999999986
No 12
>d2sqca2 a.102.4.2 (A:37-307) Squalene-hopene cyclase {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=98.31 E-value=7.7e-07 Score=69.28 Aligned_cols=84 Identities=13% Similarity=0.040 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHc-CCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHHH
Q 031897 8 TWDCALAIQALLAC-NLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCCL 86 (151)
Q Consensus 8 ~wdTala~~AL~~~-G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~ 86 (151)
+..+..++..+.+. +..+--+..++||++||+++|++ +|+|+ +. + .-|..+|+||.
T Consensus 181 ~~~~~~~~l~~~e~l~~~~lr~~a~~~a~~wl~~~q~~---dGgwG-------------~i----~---p~~~~~l~aL~ 237 (271)
T d2sqca2 181 IFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAG---DGSWG-------------GI----Q---PPWFYALIALK 237 (271)
T ss_dssp HHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHCCT---TSSST-------------TS----H---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHccC---CCCcc-------------cc----C---HHHHHHHHHHH
Confidence 45566556555543 33221267899999999999998 45553 11 1 13788999998
Q ss_pred HhccCCccccCCCCCHHHHHHHHHHHHh--cccCCCCcc
Q 031897 87 HFSMMRPEIVGEKMEPERFYDAVNCILS--LQSETGGVP 123 (151)
Q Consensus 87 ~~~~~~~~~~g~~~~~~~l~rav~~Ll~--~Qn~dGGW~ 123 (151)
.++ .+ ++++++|++++|.+ .|.+||+|.
T Consensus 238 ~~G--------~~-~~p~v~r~l~~l~~~~~~~~dG~~~ 267 (271)
T d2sqca2 238 ILD--------MT-QHPAFIKGWEGLELYGVELDYGGWM 267 (271)
T ss_dssp HTT--------CT-TSHHHHHHHHGGGGGEEECTTSCEE
T ss_pred hcC--------CC-CCHHHHHHHHHHHHheeEcCCCcee
Confidence 874 34 56899999999976 689999995
No 13
>d2h6fb1 a.102.4.3 (B:521-921) Protein farnesyltransferase, beta-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.22 E-value=3.6e-07 Score=75.27 Aligned_cols=95 Identities=16% Similarity=0.076 Sum_probs=67.9
Q ss_pred CCChhHHHHHHHHHHHcCCCCCcc-HHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHH
Q 031897 5 GSQTWDCALAIQALLACNLTDEIG-PILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALL 83 (151)
Q Consensus 5 ~~~~wdTala~~AL~~~G~~~~~~-~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~ 83 (151)
.+++..|-.|+++|+..|....++ -..++.++||.+.|.+ +|+|.. ...+-+|+--|-.|+.
T Consensus 127 ~~hla~Ty~Al~~L~ilg~~~~~~~idR~~i~~fL~slQ~p---DGsF~~--------------~~~ge~D~R~~Y~Av~ 189 (401)
T d2h6fb1 127 YPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP---DGSFLM--------------HVGGEVDVRSAYCAAS 189 (401)
T ss_dssp CBCHHHHHHHHHHHHHHCCHHHHTTSCHHHHHHHHHTTBCT---TSCBBS--------------STTCCBSHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHcCCccccchhhHHHHHHHHHHhcCC---CCCccc--------------cccCCcccchhHHHHH
Confidence 468999999999999998532110 1136778999999998 566541 1122356666777777
Q ss_pred HHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCcccc
Q 031897 84 CCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAW 125 (151)
Q Consensus 84 aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~ 125 (151)
.+..+.. ...+.++++++||+++||.||||+.-
T Consensus 190 i~~lL~~---------~~~~~~~~~~~~I~scQ~~dGGfg~~ 222 (401)
T d2h6fb1 190 VASLTNI---------ITPDLFEGTAEWIARCQNWEGGIGGV 222 (401)
T ss_dssp HHHHTTC---------CCTTTTTTHHHHHHHHBCTTSSBCSS
T ss_pred HHHHhCC---------CCHHHHHHHHHHHHHccCCCCCccCC
Confidence 7777653 13445788999999999999999854
No 14
>d2h6fb1 a.102.4.3 (B:521-921) Protein farnesyltransferase, beta-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.18 E-value=4.8e-06 Score=68.37 Aligned_cols=97 Identities=16% Similarity=0.209 Sum_probs=69.9
Q ss_pred CCChhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHH
Q 031897 5 GSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLC 84 (151)
Q Consensus 5 ~~~~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~a 84 (151)
.+.+|=.=+++.+|.-.|.+.+ ....++.++||.+.|.+ +|+|+ |+ . ...|.+..|-.||.+
T Consensus 78 ~~r~~l~yw~l~~L~LL~~~~~-~~~~~~ii~~l~~~q~~---~GGF~--------g~-----p-g~~~hla~Ty~Al~~ 139 (401)
T d2h6fb1 78 ASRPWLCYWILHSLELLDEPIP-QIVATDVCQFLELCQSP---EGGFG--------GG-----P-GQYPHLAPTYAAVNA 139 (401)
T ss_dssp TCHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHHBCT---TSSBB--------SS-----T-TCCBCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCcc-HHHHHHHHHHHHHHcCC---CCCcC--------CC-----C-CCCcchHHHHHHHHH
Confidence 4667777788999988887654 56678999999999998 56664 22 1 124677889999999
Q ss_pred HHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCcccc
Q 031897 85 CLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAW 125 (151)
Q Consensus 85 L~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~ 125 (151)
|..++... .=..+++ ++.++||+++|++||||...
T Consensus 140 L~ilg~~~---~~~~idR---~~i~~fL~slQ~pDGsF~~~ 174 (401)
T d2h6fb1 140 LCIIGTEE---AYDIINR---EKLLQYLYSLKQPDGSFLMH 174 (401)
T ss_dssp HHHHCCHH---HHTTSCH---HHHHHHHHTTBCTTSCBBSS
T ss_pred HHHcCCcc---ccchhhH---HHHHHHHHHhcCCCCCcccc
Confidence 99886310 0001222 45689999999999999754
No 15
>d3dssb1 a.102.4.3 (B:7-331) Rab geranylgeranyltransferase, beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.06 E-value=2.7e-06 Score=67.83 Aligned_cols=91 Identities=14% Similarity=-0.050 Sum_probs=64.2
Q ss_pred CCChhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHH
Q 031897 5 GSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLC 84 (151)
Q Consensus 5 ~~~~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~a 84 (151)
.+.++-|-.|+..+...|... .+.++++++||+++|.. +|+|+ ... ...+..-.|..|+-+
T Consensus 134 e~D~r~ty~Al~~l~ll~~~~--~~~~~~~~~~i~scQn~---DGGfg------------~~p--~~Esh~g~T~cavas 194 (325)
T d3dssb1 134 EIDTRFSFCAVATLALLGKLD--AINVEKAIEFVLSCMNF---DGGFG------------CRP--GSESHAGQIYCCTGF 194 (325)
T ss_dssp CBCHHHHHHHHHHHHHHTCGG--GSCHHHHHHHHHTTBCT---TSCBC------------SST--TCCCCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHcCCCc--hhhHHHHHHHHHHhcCC---cCCcc------------ccC--CCCCCcchhHHHHHH
Confidence 455777888887777778643 34689999999999998 46654 211 112334458888888
Q ss_pred HHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCcc
Q 031897 85 CLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVP 123 (151)
Q Consensus 85 L~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~ 123 (151)
|..+... +.....+.+.||..+|.++|||.
T Consensus 195 L~ll~~l---------~~~~~~~l~~wL~~rQ~~~GGf~ 224 (325)
T d3dssb1 195 LAITSQL---------HQVNSDLLGWWLCERQLPSGGLN 224 (325)
T ss_dssp HHHTTCG---------GGSCHHHHHHHHHTTBCTTSCBC
T ss_pred HHHhccc---------ccccHHHHHHHHHHhCCCCCCcC
Confidence 8877542 22235678899999999999995
No 16
>d1n4qb_ a.102.4.3 (B:) Protein farnesyltransferase, beta-subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.89 E-value=1.5e-05 Score=64.19 Aligned_cols=94 Identities=13% Similarity=-0.011 Sum_probs=63.7
Q ss_pred CChhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHH
Q 031897 6 SQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCC 85 (151)
Q Consensus 6 ~~~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL 85 (151)
+++=-|=.|++.|+-.|...+ .--.++.++||.+.|.+ +|+|.. ....+..|+--|-.|+..+
T Consensus 103 ~hl~~Ty~Al~~L~~lg~~~~-~idr~~i~~~l~~lq~~---DGsF~~-------------~~~gge~D~R~tY~A~~i~ 165 (346)
T d1n4qb_ 103 GHIAMTYTGLSCLIILGDDLS-RVDKEACLAGLRALQLE---DGSFCA-------------VPEGSENDMRFVYCASCIC 165 (346)
T ss_dssp CCHHHHHHHHHHHHHTTCCST-TSCHHHHHHHHHHHBCT---TSCBCS-------------STTCCCCBHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhchHhh-HhHHHHHHHHHHHhcCC---CCCccc-------------cCCCCcchHHHHHHHHHHH
Confidence 456667788888888875322 11256889999999998 576531 1122245666666666666
Q ss_pred HHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCcccc
Q 031897 86 LHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAW 125 (151)
Q Consensus 86 ~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~ 125 (151)
..+.. ....-++++++||+++||.||||+..
T Consensus 166 ~lL~~---------~~~~~~~~~~~~I~scq~~DGGfg~~ 196 (346)
T d1n4qb_ 166 YMLNN---------WSGMDMKKAISYIRRSMSYDNGLAQG 196 (346)
T ss_dssp HHTTC---------GGGSCHHHHHHHHHHTBCTTSSBBSS
T ss_pred HHhCC---------CccccHHHHHHHHHHhcCcCCCccCC
Confidence 65542 13344789999999999999999864
No 17
>d1hzfa_ a.102.4.4 (A:) C4adg fragment of complement factor C4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.39 E-value=0.0005 Score=52.91 Aligned_cols=76 Identities=17% Similarity=0.052 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHHHHhccCCccccCCCCCHHHHHHH
Q 031897 29 PILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDA 108 (151)
Q Consensus 29 ~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~~~~~~~~~~~g~~~~~~~l~ra 108 (151)
..|+++++=|++.|.+ +|+|+ += ..+.++.=.|+.++.+|..+.+ .| .++.+.+.++
T Consensus 52 ~~i~~g~~rl~~~Q~~---dGgf~------------~w--~~~~~~~wlTayv~~~L~~A~~-----~g-~~~~~~~~~~ 108 (326)
T d1hzfa_ 52 DLIQKGYMRIQQFRKA---DGSYA------------AW--LSRDSSTWLTAFVLKVLSLAQE-----QV-GGSPEKLQET 108 (326)
T ss_dssp HHHHHHHHHHHTTBCT---TSCBC------------SS--TTSCCCHHHHHHHHHHHHHHGG-----GT-CCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC---CCCcc------------cC--CCCCCchHHHHHHHHHHHHHHH-----hc-ccchhhHHhH
Confidence 4689999999999988 45553 21 1123445579999999999865 23 3578999999
Q ss_pred HHHHHhcccCCCCccccCC
Q 031897 109 VNCILSLQSETGGVPAWEP 127 (151)
Q Consensus 109 v~~Ll~~Qn~dGGW~~~~~ 127 (151)
+.|+++.|..+|+|.....
T Consensus 109 ~~~~l~~q~~~g~~~~~~~ 127 (326)
T d1hzfa_ 109 SNWLLSQQQADGSFQDPCP 127 (326)
T ss_dssp HHHHGGGBCTTSCBCCSSC
T ss_pred HHHHHHHhhhccccccccc
Confidence 9999999999999976543
No 18
>d1c3da_ a.102.4.4 (A:) C3D, a C3 fragment and ligand for complement receptor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.28 E-value=0.00046 Score=52.08 Aligned_cols=39 Identities=21% Similarity=0.199 Sum_probs=30.5
Q ss_pred ccchHHHHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCccc
Q 031897 75 SDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPA 124 (151)
Q Consensus 75 ~d~Ta~al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~ 124 (151)
+-.|+.+|++++... +.+.+.+.++||+..|+.+|||.+
T Consensus 237 ietta~alla~~~~~-----------~~~~~~~~~~wL~~qr~~~g~w~S 275 (294)
T d1c3da_ 237 VEATSYALLALLQLK-----------DFDFVPPVVRWLNEQRYYGGGYGS 275 (294)
T ss_dssp HHHHHHHHHHHHHTT-----------CTTTHHHHHHHHHHTTCCCCSTTC
T ss_pred HHHHHHHHHHHHhcC-----------ChhhHHHHHHHHHHcccCCCCCcc
Confidence 446788888887753 234567789999999999999975
No 19
>d1hzfa_ a.102.4.4 (A:) C4adg fragment of complement factor C4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.94 E-value=0.0012 Score=50.66 Aligned_cols=42 Identities=26% Similarity=0.102 Sum_probs=34.2
Q ss_pred cccchHHHHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCcccc
Q 031897 74 VSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAW 125 (151)
Q Consensus 74 d~d~Ta~al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~ 125 (151)
++..||.||++++.... +.+.+.+.++||++.|+.+|||.+-
T Consensus 266 ~iettayaLla~~~~~~----------~~~~~~~~~~WL~~qr~~~Ggw~ST 307 (326)
T d1hzfa_ 266 WIETTAYALLHLLLHEG----------KAEMADQASAWLTRQGSFQGGFRST 307 (326)
T ss_dssp HHHHHHHHHHHHHHHTC----------SSHHHHHHHHHHHHHTTSTTCSCSH
T ss_pred HHHHHHHHHHHHHhcCC----------CchhHHHHHHHHHHhccCCCCCccH
Confidence 46678999999987642 4466789999999999999999653
No 20
>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]}
Probab=96.90 E-value=0.0012 Score=52.71 Aligned_cols=91 Identities=18% Similarity=0.108 Sum_probs=65.1
Q ss_pred hhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHHHH
Q 031897 8 TWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCCLH 87 (151)
Q Consensus 8 ~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~~ 87 (151)
+.|+++++.||..+|.. +..++.++||.+.|... +|.|...|+-....+| ..+..|.|+..|.++..
T Consensus 58 ~RDaa~~~~al~~~G~~----~~a~~~~~~l~~~~~~~--~G~~~~~y~~dg~~~~-------~~~Q~D~~g~~l~~~~~ 124 (413)
T d1ulva1 58 ARDMYQSVTALLAAGDE----EAAARGVEWLFTYQQQP--DGHFPQTSRVDGTIGQ-------NGIQLDETAFPILLANQ 124 (413)
T ss_dssp HHHHHHHHHHHHHHTCH----HHHHHHHHHHHHHTCCT--TSCCCSCBCTTSCBCC-------CCCBTHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHcCCH----HHHHHHHHHHHHHhhCC--CCccccccccCCCcCC-------CcCccchHHHHHHHHHH
Confidence 37999999999999974 56899999999988653 6766544432111121 12458899999999988
Q ss_pred hccCCccccCCCCCHHHHHHHHHHHHhcc
Q 031897 88 FSMMRPEIVGEKMEPERFYDAVNCILSLQ 116 (151)
Q Consensus 88 ~~~~~~~~~g~~~~~~~l~rav~~Ll~~Q 116 (151)
+.+. +.....+.|+++++||...-
T Consensus 125 ~~~~-----~~~~~~~~i~~a~~~l~~~~ 148 (413)
T d1ulva1 125 IGRT-----DAGFYRNELKPAADYLVAAG 148 (413)
T ss_dssp HTCC-----CHHHHHHTHHHHHHHHHHHC
T ss_pred Hhhh-----cchHHHHHHHHHHHHHHHcC
Confidence 7653 22335578999999998753
No 21
>d1w6ka2 a.102.4.2 (A:100-378) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.77 E-value=0.0006 Score=53.07 Aligned_cols=31 Identities=16% Similarity=0.039 Sum_probs=26.8
Q ss_pred CCCCCHHHHHHHHHHHHhcccCCCCccccCC
Q 031897 97 GEKMEPERFYDAVNCILSLQSETGGVPAWEP 127 (151)
Q Consensus 97 g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~~~ 127 (151)
|.+.+++..++.++||.+.||+||||+.+..
T Consensus 17 g~~~~~e~~~e~~ryL~~~Q~~DGgWg~~~~ 47 (279)
T d1w6ka2 17 RIPLPAGYREEIVRYLRSVQLPDGGWGLHIE 47 (279)
T ss_dssp TCCCCTTHHHHHHHHHHHHSCTTSCBCSBTT
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCccCCCC
Confidence 4567888899999999999999999987653
No 22
>d1c3da_ a.102.4.4 (A:) C3D, a C3 fragment and ligand for complement receptor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.68 E-value=0.004 Score=46.64 Aligned_cols=75 Identities=12% Similarity=-0.169 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHHHHhccCCccccCCCCCHHHHHHH
Q 031897 29 PILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKMEPERFYDA 108 (151)
Q Consensus 29 ~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~~~~~~~~~~~g~~~~~~~l~ra 108 (151)
..|++++.=|.+.|.+ +|+|+ += ....++.-.|+.++.+|..+.+ .|..++...++++
T Consensus 54 ~~i~~gi~rl~~~Q~~---dGgf~------------~w--~~~~~~~~lTayv~~~L~~A~~-----~g~~~~~~~~~~~ 111 (294)
T d1c3da_ 54 ELIKKGYTQQLAFRQP---SSAFA------------AF--VKRAPSTWLTAYVVKVFSLAVN-----LIAIDSQVLCGAV 111 (294)
T ss_dssp HHHHHHHHHHHTTBCT---TSCBC------------SS--TTSCCCHHHHHHHHHHHHHTTT-----TSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC---CCCcc------------cC--CCCCCCcchHHHHHHHHHHHHH-----hcccChHHHHHHH
Confidence 4589999999999998 45553 21 1122345579999999999864 3556666666777
Q ss_pred HHHHHhcccCCCCcccc
Q 031897 109 VNCILSLQSETGGVPAW 125 (151)
Q Consensus 109 v~~Ll~~Qn~dGGW~~~ 125 (151)
..++...|+.+|.|..-
T Consensus 112 ~~~l~~~~~~~~~~~e~ 128 (294)
T d1c3da_ 112 KWLILEKQKPDGVFQED 128 (294)
T ss_dssp HHHHHHHBCTTSCBCCS
T ss_pred HHHHHhhhhcCCCcccc
Confidence 77777889988888654
No 23
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]}
Probab=96.51 E-value=0.0023 Score=50.47 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHHHHh
Q 031897 9 WDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCCLHF 88 (151)
Q Consensus 9 wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~~~ 88 (151)
.|+++++.||..+|.. +..++.++||.+.|.+ +|.+...+. ..|+. .-+.+..|.+++.+.++..+
T Consensus 56 RDaa~~~~al~~~G~~----~~a~~~l~~l~~~~~~---~G~~~~~~~---~~G~~----~~~~~q~D~~g~~i~a~~~~ 121 (397)
T d1lf6a1 56 RDLYHVANAFIAAGDV----DSANRSLDYLAKVVKD---NGMIPQNTW---ISGKP----YWTGIQLDEQADPIILSYRL 121 (397)
T ss_dssp HHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHH---HSSCCSCBC---TTSCB----CCCCCCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHcCCH----HHHHHHHHHHHHHhcc---cCCCCCCCC---cCCCc----cccCCCCchHHHHHHHHHHH
Confidence 4999999999999974 5688999999999987 466543321 11221 12246789999999998887
Q ss_pred ccCCccccCCCCCHHHHHHHHHHHHhccc
Q 031897 89 SMMRPEIVGEKMEPERFYDAVNCILSLQS 117 (151)
Q Consensus 89 ~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn 117 (151)
.+. ....+.|+++++||...-+
T Consensus 122 ~~~-------~~~~~~i~~~~~~l~~~~~ 143 (397)
T d1lf6a1 122 KRY-------DLYDSLVKPLADFIIKIGP 143 (397)
T ss_dssp TCG-------GGTTTTHHHHHHHHHHHCS
T ss_pred Hhc-------chhHHHHHHHHHHHHHhCC
Confidence 542 2345678999999987633
No 24
>d1n4qb_ a.102.4.3 (B:) Protein farnesyltransferase, beta-subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.97 E-value=0.0058 Score=48.60 Aligned_cols=93 Identities=14% Similarity=0.066 Sum_probs=60.3
Q ss_pred CCChhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHH
Q 031897 5 GSQTWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLC 84 (151)
Q Consensus 5 ~~~~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~a 84 (151)
.++++-|-.|+..+.-.+... ...+.++++||+++|.- +|+|+.. ||. ..|+ --|-.||-+
T Consensus 152 e~D~R~tY~A~~i~~lL~~~~--~~~~~~~~~~I~scq~~---DGGfg~~-----p~~-----EsHg----g~TfCavas 212 (346)
T d1n4qb_ 152 ENDMRFVYCASCICYMLNNWS--GMDMKKAISYIRRSMSY---DNGLAQG-----AGL-----ESHG----GSTFCGIAS 212 (346)
T ss_dssp CCBHHHHHHHHHHHHHTTCGG--GSCHHHHHHHHHHTBCT---TSSBBSS-----TTS-----CBCH----HHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCc--cccHHHHHHHHHHhcCc---CCCccCC-----CCC-----CccH----HHHHHHHHH
Confidence 567777766665555555432 23489999999999998 5776521 121 1222 238888888
Q ss_pred HHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCcc
Q 031897 85 CLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVP 123 (151)
Q Consensus 85 L~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~ 123 (151)
|..+.+.. .......+++-+.||...| +||+.
T Consensus 213 L~ll~~~~-----~~~~~~~~~~l~~WL~~Rq--~gGf~ 244 (346)
T d1n4qb_ 213 LCLMGKLE-----EVFSEKELNRIKRWCIMRQ--QNGYH 244 (346)
T ss_dssp HHHHTCHH-----HHSCHHHHHHHHHHHHTTB--SSSBC
T ss_pred HHHhcccc-----cccchhhHHHHHHHHHhcc--cCCcC
Confidence 88875321 0113457889999999888 68886
No 25
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=92.29 E-value=0.073 Score=41.60 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=63.6
Q ss_pred hhHHHHHHHHHHHc---C---CCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcc-----ccc
Q 031897 8 TWDCALAIQALLAC---N---LTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQ-----VSD 76 (151)
Q Consensus 8 ~wdTala~~AL~~~---G---~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~p-----d~d 76 (151)
+|-++-.+..++.+ | -.+++...++++++||.+.-..+... |||-|+....|-| +.-
T Consensus 55 ~~~~~R~l~~fs~a~~~~~~~~~~~~~~~a~~g~~~L~~~~~~d~~~------------Gg~~~~vd~dG~~~~~~k~~Y 122 (402)
T d1fp3a_ 55 VWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPE------------KKCAFVLTRDGRPVKVQRSIF 122 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTS------------CCBCSEECTTSCEEECCSSSH
T ss_pred eeeeHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhCCccCCC------------CCEEEEECCCCCcCccccccc
Confidence 56666666655533 2 13446788999999999865432223 4555554444322 344
Q ss_pred chHHHHHHHHHhccCCccccCCCCCHHHHHHHHHHHHh-cccCCCC-cccc
Q 031897 77 CTAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILS-LQSETGG-VPAW 125 (151)
Q Consensus 77 ~Ta~al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~-~Qn~dGG-W~~~ 125 (151)
+-|.+|.|+..+.+. .|.+...+.+++.+++|.+ ++.++|| |.+-
T Consensus 123 d~Af~l~a~a~~~~~----tg~~~~~~~a~~~~~~i~~~~~~~~~g~~~~~ 169 (402)
T d1fp3a_ 123 SECFYTMAMNELWRV----TAEARYQSEAVDMMDQIVHWVREDPSGLGRPQ 169 (402)
T ss_dssp HHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCC
T ss_pred ccHHHHHHHHHHHhc----cCCHHHHHHHHHHHHHHHHHhhcccCCCCccc
Confidence 679999999887653 2555556777888888875 6777665 4443
No 26
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]}
Probab=89.12 E-value=0.68 Score=35.55 Aligned_cols=82 Identities=11% Similarity=0.163 Sum_probs=52.8
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCcccc----cCCCC--CccccccCCCCCcccccchHHHHHHHHHhccCCccccCCCC
Q 031897 27 IGPILMKAHDFLKASQVTDNPQGDFRSM----FRHIS--KGGWTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKM 100 (151)
Q Consensus 27 ~~~~i~rA~~~L~~~Q~~~~~~G~~~~~----~~~~~--~GgW~fs~~~~~~pd~d~Ta~al~aL~~~~~~~~~~~g~~~ 100 (151)
....++|++-=|+.+|.++ .+|..--. .+... .-.|.|-+. | +=|++.+++||+.++
T Consensus 7 ~~~~~~~s~~~lk~~~~~~-~~GaiiAsptt~~~e~~~~~~~~~Y~y~---W--~RDaa~~~~al~~~G----------- 69 (397)
T d1lf6a1 7 ANSLYYNSMMILKASEDKT-NKGAYIASLSIPWGDGQRDDNTGGYHLV---W--SRDLYHVANAFIAAG----------- 69 (397)
T ss_dssp CCHHHHHHHHHHHTTBCSS-STTCBCSCSSCTTGGGSBSBSCCGGGSB---C--HHHHHHHHHHHHHHT-----------
T ss_pred HHHHHHHHHHHHHHccCCC-CCceEEEeCCCCcccccCCCCCCCCeeE---c--HhhHHHHHHHHHHcC-----------
Confidence 3568899999999888653 24654211 01000 012333221 3 225888889998875
Q ss_pred CHHHHHHHHHHHHhcccCCCCcccc
Q 031897 101 EPERFYDAVNCILSLQSETGGVPAW 125 (151)
Q Consensus 101 ~~~~l~rav~~Ll~~Qn~dGGW~~~ 125 (151)
..+..++.++||.+.|+++|.|+.-
T Consensus 70 ~~~~a~~~l~~l~~~~~~~G~~~~~ 94 (397)
T d1lf6a1 70 DVDSANRSLDYLAKVVKDNGMIPQN 94 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHSSCCSC
T ss_pred CHHHHHHHHHHHHHHhcccCCCCCC
Confidence 4567889999999999999988653
No 27
>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]}
Probab=86.21 E-value=1.6 Score=33.68 Aligned_cols=85 Identities=14% Similarity=0.179 Sum_probs=52.6
Q ss_pred CCCCccHHHHHHHHHHHhhccCCCCCCCcccc----cCCCCCcc---ccccCCCCCcccccchHHHHHHHHHhccCCccc
Q 031897 23 LTDEIGPILMKAHDFLKASQVTDNPQGDFRSM----FRHISKGG---WTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEI 95 (151)
Q Consensus 23 ~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~----~~~~~~Gg---W~fs~~~~~~pd~d~Ta~al~aL~~~~~~~~~~ 95 (151)
++.++....++++-=|+.+|... ++|..--. .+. ..|+ |. .|.. .| +=|++.+++||+.++
T Consensus 5 ~~~~~~~~~~~S~l~lk~~~~~~-~~GaiiAapt~~~pe-~~~~~~n~d-~Yry-~W--~RDaa~~~~al~~~G------ 72 (413)
T d1ulva1 5 LTGALRTQYDVSLMTVKSHEDKT-FPGAFIASLTIPWGQ-AASAETHRE-GYHA-VW--ARDMYQSVTALLAAG------ 72 (413)
T ss_dssp CCHHHHHHHHHHHHHHHTTBCSS-STTCBCSCSSCTTGG-GSBCSSCCC-TTCS-BC--HHHHHHHHHHHHHHT------
T ss_pred CCHHHHHHHHHHHHHHHHcccCC-CCCeEEEeCCCCCCc-ccCCccCCC-Ccee-ec--HhhHHHHHHHHHHcC------
Confidence 44456778899999999887542 24654211 000 1121 11 0111 12 236788889998886
Q ss_pred cCCCCCHHHHHHHHHHHHhcc-cCCCCccc
Q 031897 96 VGEKMEPERFYDAVNCILSLQ-SETGGVPA 124 (151)
Q Consensus 96 ~g~~~~~~~l~rav~~Ll~~Q-n~dGGW~~ 124 (151)
..+..++.++||++.| +++|.|..
T Consensus 73 -----~~~~a~~~~~~l~~~~~~~~G~~~~ 97 (413)
T d1ulva1 73 -----DEEAAARGVEWLFTYQQQPDGHFPQ 97 (413)
T ss_dssp -----CHHHHHHHHHHHHHHTCCTTSCCCS
T ss_pred -----CHHHHHHHHHHHHHHhhCCCCcccc
Confidence 4577889999999987 57888854
No 28
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=83.87 E-value=0.49 Score=28.79 Aligned_cols=26 Identities=23% Similarity=0.047 Sum_probs=18.0
Q ss_pred HHHHHHHHcCCCCCccHHHHHHHHHHHhhccC
Q 031897 13 LAIQALLACNLTDEIGPILMKAHDFLKASQVT 44 (151)
Q Consensus 13 la~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~ 44 (151)
.++.||..++- .|.+|++||+++|.+
T Consensus 45 ~a~~AL~~~~~------n~e~A~~~Ll~~~~p 70 (73)
T d1vg5a_ 45 QVEVALAAADD------DLTVAVEILMSQSGP 70 (73)
T ss_dssp HHHHHHHHHTS------CHHHHHHHHHTCSCS
T ss_pred HHHHHHHHhCC------CHHHHHHHHHhCCCC
Confidence 34445554442 289999999998876
No 29
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=82.36 E-value=0.82 Score=27.69 Aligned_cols=15 Identities=20% Similarity=0.246 Sum_probs=12.9
Q ss_pred HHHHHHHHHhhccCC
Q 031897 31 LMKAHDFLKASQVTD 45 (151)
Q Consensus 31 i~rA~~~L~~~Q~~~ 45 (151)
|.+|++||.++..++
T Consensus 57 ~e~Av~~Lls~~~~~ 71 (73)
T d1wiva_ 57 IEKATDWVFNNSGPS 71 (73)
T ss_dssp HHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHcCCCCC
Confidence 899999999987764
No 30
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]}
Probab=81.63 E-value=0.9 Score=35.87 Aligned_cols=22 Identities=5% Similarity=0.007 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhcccCCCCc
Q 031897 101 EPERFYDAVNCILSLQSETGGV 122 (151)
Q Consensus 101 ~~~~l~rav~~Ll~~Qn~dGGW 122 (151)
..+.++=+++||++||.++|+.
T Consensus 94 lLdE~~wg~D~llkmq~~~g~~ 115 (431)
T d1ia6a_ 94 MLQQLKYFTDYFLKSHPNSTTF 115 (431)
T ss_dssp HHHHHHHHHHHHHHTCCSTTCE
T ss_pred HHHHHHHHHHHHHHcccCCCeE
Confidence 3456777899999999999984
No 31
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.43 E-value=1.1 Score=26.31 Aligned_cols=30 Identities=23% Similarity=0.093 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCC
Q 031897 10 DCALAIQALLACNLTDEIGPILMKAHDFLKASQVTD 45 (151)
Q Consensus 10 dTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~~ 45 (151)
+...+..||...+- .+++|++||.+++...
T Consensus 22 ~~~~a~~AL~~~~~------~~e~A~~wL~~~~~~~ 51 (63)
T d1wjia_ 22 SKEASRQALMDNGN------NLEAALNVLLTSNKQK 51 (63)
T ss_dssp CHHHHHHHHHHTTS------CHHHHHHHHHHHSSCC
T ss_pred CHHHHHHHHHHhCC------CHHHHHHHHHHCCCCC
Confidence 44566677776653 2899999999987653
No 32
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]}
Probab=80.57 E-value=3.2 Score=31.33 Aligned_cols=47 Identities=11% Similarity=0.032 Sum_probs=29.7
Q ss_pred hHHHHHHHHHhccCCc-cccCCCCCHHHHHHHHHHHHhcccCC-CCccc
Q 031897 78 TAEALLCCLHFSMMRP-EIVGEKMEPERFYDAVNCILSLQSET-GGVPA 124 (151)
Q Consensus 78 Ta~al~aL~~~~~~~~-~~~g~~~~~~~l~rav~~Ll~~Qn~d-GGW~~ 124 (151)
-+|++.||..+-+.-+ ++-.++.-.+.+++-++.|+..|.+| |-|-.
T Consensus 205 ngW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~q~~d~G~w~~ 253 (363)
T d1nc5a_ 205 IGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQ 253 (363)
T ss_dssp HHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCBS
T ss_pred chHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccCCCCccccc
Confidence 5899999998654211 11111222345677789999999876 66643
No 33
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]}
Probab=78.28 E-value=0.82 Score=35.54 Aligned_cols=107 Identities=15% Similarity=0.061 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHcCC---CCCccHHHHHHHHHHHhh-ccCCCCCCC-cccccCCCCCccccccCCCCCccccc----chHH
Q 031897 10 DCALAIQALLACNL---TDEIGPILMKAHDFLKAS-QVTDNPQGD-FRSMFRHISKGGWTFSNKDHGWQVSD----CTAE 80 (151)
Q Consensus 10 dTala~~AL~~~G~---~~~~~~~i~rA~~~L~~~-Q~~~~~~G~-~~~~~~~~~~GgW~fs~~~~~~pd~d----~Ta~ 80 (151)
|+..++..|..++. ++.|.....+-.++..+. +.+ +|+ +.+.+.+...|.|......+|+.+.+ .-|+
T Consensus 149 D~lm~~~~l~~~~~~tgd~~y~~~A~~h~~~~~~~l~r~---d~s~~~~~~~~~~tG~~~~~~t~qG~~~~s~WsRGqaW 225 (377)
T d2d5ja1 149 DCLLNLPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRG---DDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAW 225 (377)
T ss_dssp GGGGGHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBBT---TSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHH
T ss_pred hhhhhHHHHHHHHHhcCCHhHHHHHHHHHHHHHHHhcCC---CCCeEEEEEecCCCCcccCCCCCCCCCCcchHhhchHH
Confidence 44455555555442 222444444445555553 443 343 22233345567665544444443322 2488
Q ss_pred HHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCcc
Q 031897 81 ALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVP 123 (151)
Q Consensus 81 al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~ 123 (151)
++.+|..+-+. .+++...+..++.+++++..|.+||-|-
T Consensus 226 ~i~gl~~~~~~----t~~~~~l~~a~~~a~~~l~~~~~dgi~~ 264 (377)
T d2d5ja1 226 GIYGFALNSRY----LGNADLLETAKRMARHFLARVPEDGVVY 264 (377)
T ss_dssp HHHHHHHHHHH----HTCHHHHHHHHHHHHHHHTTCCTTSCCB
T ss_pred HHHHHHHHHHH----hCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999876532 2334455677888999999999998653
No 34
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]}
Probab=76.99 E-value=3.5 Score=31.80 Aligned_cols=102 Identities=11% Similarity=0.033 Sum_probs=59.6
Q ss_pred ChhHHHHHHHHHHHc---CCCCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHH
Q 031897 7 QTWDCALAIQALLAC---NLTDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALL 83 (151)
Q Consensus 7 ~~wdTala~~AL~~~---G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~ 83 (151)
.+|.++-.+..++.+ |. +++...++++++||.+.-...+ .|+|.... ..|+ .... -.+.-+.|.+|.
T Consensus 48 ~~~~~aR~~~~fs~a~~~g~-~~~~~~A~~g~~fL~~~~~d~~-~Gg~~~~~---~~~~-~~d~----~k~~Y~~AF~l~ 117 (411)
T d2afaa1 48 HLWITARMLHVYSVAASMGR-PGAYDLVDHGIKAMNGALRDKK-YGGWYACV---NDQG-VVDA----SKQGYQHFFALL 117 (411)
T ss_dssp EHHHHHHHHHHHHHHHHTTC-TTHHHHHHHHHHHTTTTTBCTT-TSSBCSEE---CSSS-EEEC----CEEHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhcCcCC-CCeEEEee---cCCC-Cccc----chhhHHHHHHHH
Confidence 456666666666554 53 4578999999999987554321 12222111 1111 1011 123346789999
Q ss_pred HHHHhccCCccccCCCCCHHHHHHHHHHHHhcc-cCC-CCcc
Q 031897 84 CCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQ-SET-GGVP 123 (151)
Q Consensus 84 aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Q-n~d-GGW~ 123 (151)
||..+.+ +|.+...+.+++.+++|...- .++ ||+.
T Consensus 118 ala~~~~-----~g~~~~~~~a~~~~~~l~~~~~~~~~G~~~ 154 (411)
T d2afaa1 118 GAASAVT-----TGHPEARKLLDYTIEVIEKYFWSEEEQMCL 154 (411)
T ss_dssp HHHHHHT-----TTCTTHHHHHHHHHHHHHHHTEETTTTEEC
T ss_pred HHHHHHH-----hCCHHHHHHHHHHHHHHHHHhhCccCCCch
Confidence 9998864 355655677888888877654 333 4443
No 35
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.97 E-value=1.6 Score=25.57 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=17.2
Q ss_pred HHHHHHHHcCCCCCccHHHHHHHHHHHhhccC
Q 031897 13 LAIQALLACNLTDEIGPILMKAHDFLKASQVT 44 (151)
Q Consensus 13 la~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~ 44 (151)
.+..||..++. .+.+|++||.++-.+
T Consensus 35 ~a~~AL~~~~~------n~e~A~~~Lls~~~p 60 (63)
T d1wgna_ 35 CVLRAMKKKGE------NIEQILDYLFAHSGP 60 (63)
T ss_dssp HHHHHHHHHCS------CHHHHHHHHHHHSCC
T ss_pred HHHHHHHHcCC------CHHHHHHHHHhCCCC
Confidence 34445555442 288999999987665
No 36
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.01 E-value=2.5 Score=23.62 Aligned_cols=28 Identities=21% Similarity=0.130 Sum_probs=19.5
Q ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHHHhhccC
Q 031897 12 ALAIQALLACNLTDEIGPILMKAHDFLKASQVT 44 (151)
Q Consensus 12 ala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~ 44 (151)
..|..||...|-. .+++|++||.+++..
T Consensus 17 ~~a~~Al~~t~n~-----~ve~A~~Wl~~h~~d 44 (51)
T d2crna1 17 HTALKALAATGRK-----TAEEALAWLHDHCND 44 (51)
T ss_dssp HHHHHHHHHHTSC-----CHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHCCC-----CHHHHHHHHHHcCCC
Confidence 3455666665532 289999999998765
No 37
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]}
Probab=72.32 E-value=5.1 Score=30.14 Aligned_cols=91 Identities=9% Similarity=0.059 Sum_probs=56.6
Q ss_pred HHHHHHHHHHc--CCCCC------ccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHH
Q 031897 11 CALAIQALLAC--NLTDE------IGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEAL 82 (151)
Q Consensus 11 Tala~~AL~~~--G~~~~------~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al 82 (151)
-++++.+|+.. -++++ +....++.++.|++.|.++ .|.|......+ .....+++++.||...
T Consensus 205 ngW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~q~~d--~G~w~~~~d~p--------~~~~~~~etSata~~~ 274 (363)
T d1nc5a_ 205 IGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKE--TGLWYQIVDKG--------DRSDNWLESSGSCLYM 274 (363)
T ss_dssp HHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTT--TSCCBSBTTCT--------TSTTCCBCHHHHHHHH
T ss_pred chHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccCCC--CccccccccCC--------CCCCCccchHHHHHHH
Confidence 45667777654 23322 4455778888999999875 46554211110 1122467888898888
Q ss_pred HHHHHhccCCccccCCCCCHHHHHHHHHHHHh
Q 031897 83 LCCLHFSMMRPEIVGEKMEPERFYDAVNCILS 114 (151)
Q Consensus 83 ~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~ 114 (151)
-+|+...+. +.+++ ...+++++|.+-|++
T Consensus 275 y~l~~g~~~--g~l~~-~y~~~~~ka~~~l~~ 303 (363)
T d1nc5a_ 275 YAIAKGINK--GYLDR-AYETTLLKAYQGLIQ 303 (363)
T ss_dssp HHHHHHHHH--TSSCG-GGHHHHHHHHHHHHH
T ss_pred HHHHHHHHc--CcccH-HHHHHHHHHHHHHHH
Confidence 888775431 12233 367899999999875
No 38
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]}
Probab=70.93 E-value=1.9 Score=33.93 Aligned_cols=96 Identities=8% Similarity=-0.039 Sum_probs=48.0
Q ss_pred CCccHHHHHHHHHHHhhccC---CCCCCCcccc--cC------CCCCccccccCCCCCcccccchHHHHHHHHHhccCCc
Q 031897 25 DEIGPILMKAHDFLKASQVT---DNPQGDFRSM--FR------HISKGGWTFSNKDHGWQVSDCTAEALLCCLHFSMMRP 93 (151)
Q Consensus 25 ~~~~~~i~rA~~~L~~~Q~~---~~~~G~~~~~--~~------~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~~~~~~~~ 93 (151)
-+|.+.|.+++.|...+..- .+..+.|... .. -.-.|||-=.....-| +--++.++..|+...+..+
T Consensus 3 ~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~w~~~s~~~dg~~~~~DvsGGWyDAGD~~Ky--~~~~a~s~~~L~~a~~~~~ 80 (433)
T d1ks8a_ 3 YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKF--GFPMAYTATVLAWGLIDFE 80 (433)
T ss_dssp CCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEE--HHHHHHHHHHHHHHHHHTH
T ss_pred CCHHHHHHHHHHHHHHccCcCCCcccCCCCCCcccCCCccccCCCCCCCceeCCcccee--chhhHHHHHHHHHHHHHhH
Confidence 35788999999999775431 1112233211 00 1135777522111111 1124444444432211111
Q ss_pred c----ccCCCCCHHHHHHHHHHHHhcccCCCCc
Q 031897 94 E----IVGEKMEPERFYDAVNCILSLQSETGGV 122 (151)
Q Consensus 94 ~----~~g~~~~~~~l~rav~~Ll~~Qn~dGGW 122 (151)
+ -.+.+.-.+.++=+++||++||.++|++
T Consensus 81 ~~~~s~~~~~dlldE~kwg~D~llkmq~~~g~~ 113 (433)
T d1ks8a_ 81 AGYSSAGALDDGRKAVKWATDYFIKAHTSQNEF 113 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHCCBTTBE
T ss_pred HhhccCCchHHHHHHHHHHHHHHHHcccCCCCE
Confidence 1 1122223456778999999999999964
No 39
>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.89 E-value=2.1 Score=24.02 Aligned_cols=11 Identities=27% Similarity=0.362 Sum_probs=8.6
Q ss_pred HHHHHHHHHhh
Q 031897 31 LMKAHDFLKAS 41 (151)
Q Consensus 31 i~rA~~~L~~~ 41 (151)
|++|++||.++
T Consensus 41 ve~A~~WLl~H 51 (51)
T d2cpwa1 41 VQTACDWLFSH 51 (51)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHcC
Confidence 78888888753
No 40
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]}
Probab=69.02 E-value=2.4 Score=33.61 Aligned_cols=22 Identities=9% Similarity=-0.029 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhcccCCCCc
Q 031897 101 EPERFYDAVNCILSLQSETGGV 122 (151)
Q Consensus 101 ~~~~l~rav~~Ll~~Qn~dGGW 122 (151)
..+.++=+++||++||.++|++
T Consensus 91 lLdE~kwglDwllkmq~~~g~~ 112 (454)
T d1g87a1 91 IMDGIKWANDYFIKCNPTPGVY 112 (454)
T ss_dssp HHHHHHHHHHHHHHTCCSTTCE
T ss_pred HHHHHHHHHHHHHheecCCCeE
Confidence 3456778899999999999976
No 41
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=68.30 E-value=3.6 Score=24.60 Aligned_cols=15 Identities=20% Similarity=0.237 Sum_probs=13.0
Q ss_pred HHHHHHHHHhcccCC
Q 031897 105 FYDAVNCILSLQSET 119 (151)
Q Consensus 105 l~rav~~Ll~~Qn~d 119 (151)
+++|++||++-|.+.
T Consensus 57 ~e~A~~~Ll~~~~ps 71 (73)
T d1vg5a_ 57 LTVAVEILMSQSGPS 71 (73)
T ss_dssp HHHHHHHHHTCSCSS
T ss_pred HHHHHHHHHhCCCCC
Confidence 788999999988764
No 42
>d1qaza_ a.102.3.1 (A:) Alginate lyase A1-III {Sphingomonas sp., A1 [TaxId: 28214]}
Probab=68.17 E-value=2.9 Score=32.14 Aligned_cols=93 Identities=8% Similarity=0.072 Sum_probs=49.5
Q ss_pred ChhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHh--hccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHH
Q 031897 7 QTWDCALAIQALLACNLTDEIGPILMKAHDFLKA--SQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLC 84 (151)
Q Consensus 7 ~~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~--~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~a 84 (151)
..|.++.+.+.++-.-+..+ ...++++++.++. .|+.. +|.+..- ...|+.++.+ +..+|.+
T Consensus 187 nNH~~w~~~~v~aigv~~~d-~~l~~~a~~~~~~~l~qi~~--DG~lp~E---~~Rg~~a~~Y----------~~~al~~ 250 (351)
T d1qaza_ 187 NNHSYWRGQEATIIGVISKD-DELFRWGLGRYVQAMGLINE--DGSFVHE---MTRHEQSLHY----------QNYAMLP 250 (351)
T ss_dssp SHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHTTBCT--TSCBTTG---GGSGGGHHHH----------HHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhccC--CCCCchh---hhhcccCchh----------HHHHHHH
Confidence 46666665554444434445 6788888888766 45553 6765311 1123322211 4455555
Q ss_pred HHHhccCCc----cccCCCCCHHHHHHHHHHHHhc
Q 031897 85 CLHFSMMRP----EIVGEKMEPERFYDAVNCILSL 115 (151)
Q Consensus 85 L~~~~~~~~----~~~g~~~~~~~l~rav~~Ll~~ 115 (151)
|+.+.+... ++-+...+...|.++|+|++..
T Consensus 251 l~~iae~a~~~G~DL~~~~~ng~~i~~~~~f~~~~ 285 (351)
T d1qaza_ 251 LTMIAETASRQGIDLYAYKENGRDIHSARKFVFAA 285 (351)
T ss_dssp HHHHHHHHHTTTCCCTTCCSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccccCcccHHHHHHHHHHHHH
Confidence 555433211 1222222445799999998865
No 43
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.11 E-value=4.1 Score=23.71 Aligned_cols=27 Identities=22% Similarity=0.081 Sum_probs=18.7
Q ss_pred HHHHHHHHcCCCCCccHHHHHHHHHHHhhccC
Q 031897 13 LAIQALLACNLTDEIGPILMKAHDFLKASQVT 44 (151)
Q Consensus 13 la~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~ 44 (151)
.|..||...+-. -+++|++||.++...
T Consensus 25 ~a~~AL~~t~n~-----~~e~A~~Wl~~h~~d 51 (64)
T d1whca_ 25 RAEKALALTGNQ-----GIEAAMDWLMEHEDD 51 (64)
T ss_dssp HHHHHHHHHTSC-----CHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCC-----CHHHHHHHHHHCCCC
Confidence 455566655432 289999999998765
No 44
>d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=62.00 E-value=5.7 Score=24.31 Aligned_cols=14 Identities=14% Similarity=0.164 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhccC
Q 031897 31 LMKAHDFLKASQVT 44 (151)
Q Consensus 31 i~rA~~~L~~~Q~~ 44 (151)
+.+|++||.+++..
T Consensus 58 ~e~A~~Wl~~h~~d 71 (84)
T d1veka_ 58 VEEAMNWLLSHMDD 71 (84)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCC
Confidence 89999999998875
No 45
>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]}
Probab=56.76 E-value=25 Score=27.67 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccC
Q 031897 8 TWDCALAIQALLACNLTDEIGPILMKAHDFLKASQVT 44 (151)
Q Consensus 8 ~wdTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q~~ 44 (151)
-|||.|++++|+.+|+. ..++..++-+...|..
T Consensus 122 yWDSyfi~lGLl~~~~~----~~a~~ml~nf~~~i~~ 154 (511)
T d2jg0a1 122 YWDSYFTMLGLAESGHW----DKVADMVANFAHEIDT 154 (511)
T ss_dssp HHHHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCcH----HHHHHHHHHHHHHHHh
Confidence 59999999999999963 4566677766676665
No 46
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.24 E-value=1.8 Score=23.17 Aligned_cols=9 Identities=22% Similarity=0.342 Sum_probs=5.5
Q ss_pred HHHHHHHHH
Q 031897 31 LMKAHDFLK 39 (151)
Q Consensus 31 i~rA~~~L~ 39 (151)
+.+|++||.
T Consensus 32 ~e~A~~~Ll 40 (41)
T d1oqya1 32 PHRAVEYLL 40 (41)
T ss_dssp TTHHHHTTT
T ss_pred HHHHHHHHh
Confidence 456666664
No 47
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.32 E-value=7.8 Score=21.53 Aligned_cols=27 Identities=33% Similarity=0.254 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhc
Q 031897 10 DCALAIQALLACNLTDEIGPILMKAHDFLKASQ 42 (151)
Q Consensus 10 dTala~~AL~~~G~~~~~~~~i~rA~~~L~~~Q 42 (151)
|+...+.||.++|= + |.+|++.|++.|
T Consensus 22 d~~~Ni~AL~~t~G--d----V~~Aie~Ll~~~ 48 (50)
T d2dnaa1 22 NYNANLQALIATDG--D----TNAAIYKLKSSQ 48 (50)
T ss_dssp CHHHHHHHHHHTTS--C----HHHHHHHHHHCC
T ss_pred CHHHHHHHHHHcCC--C----HHHHHHHHHhcC
Confidence 56667788877752 2 899999999865
No 48
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]}
Probab=53.08 E-value=11 Score=28.68 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcC-C--CCCccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCC--CCcccccchHHHHHH
Q 031897 10 DCALAIQALLACN-L--TDEIGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKD--HGWQVSDCTAEALLC 84 (151)
Q Consensus 10 dTala~~AL~~~G-~--~~~~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~--~~~pd~d~Ta~al~a 84 (151)
.-++++.+|+..= . ++.+-+..++.++|++++|.. +|-|. |.|..++ ..+-|++.||.+.-|
T Consensus 222 GqaW~i~gl~~~~~~t~~~~~l~~a~~~a~~~l~~~~~---dgi~~----------wd~~~p~~~~~~~DsSa~Ai~A~g 288 (377)
T d2d5ja1 222 GQAWGIYGFALNSRYLGNADLLETAKRMARHFLARVPE---DGVVY----------WDFEVPQEPSSYRDSSASAITACG 288 (377)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCT---TSCCB----------SBTTSCCCTTSCBCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhCCC---CCCcc----------ccccccCCCCCCCCcchHHHHHHH
Confidence 4566777776532 1 223566778889999988865 45443 4443222 224577888888888
Q ss_pred HHHhcc
Q 031897 85 CLHFSM 90 (151)
Q Consensus 85 L~~~~~ 90 (151)
|+.+.+
T Consensus 289 ll~L~~ 294 (377)
T d2d5ja1 289 LLEIAS 294 (377)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 49
>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]}
Probab=51.90 E-value=8.8 Score=30.43 Aligned_cols=110 Identities=19% Similarity=0.228 Sum_probs=57.0
Q ss_pred hhHHHHHHHHHHHcCCCCC--ccHHHHHHHHHHHhhccCCCCCCCcccc------c-CCCC--CccccccCCCCCccccc
Q 031897 8 TWDCALAIQALLACNLTDE--IGPILMKAHDFLKASQVTDNPQGDFRSM------F-RHIS--KGGWTFSNKDHGWQVSD 76 (151)
Q Consensus 8 ~wdTala~~AL~~~G~~~~--~~~~i~rA~~~L~~~Q~~~~~~G~~~~~------~-~~~~--~GgW~fs~~~~~~pd~d 76 (151)
+-|.+|++.||...|...+ +...+.+-+.+-...|...+++|.+... + .+.+ .+.|+ .|..|
T Consensus 53 ~RDaA~t~~AL~~~~~~~~~~~~~~i~~~i~~~~~lq~~~~~~G~~~~~~l~~p~~~~dg~~~~~~wg-------rpq~d 125 (472)
T d1gaia_ 53 TRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSNPSGDLSSGGLGEPKFNVDETAYTGSWG-------RPQRD 125 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCCBTTBCTTTTGGGCCEECTTSCBCCSCCS-------CCCTH
T ss_pred hhhHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhcccCCCCcccCCcccCceeeecCCcCCCcCC-------Ccccc
Confidence 5699999999998875443 2334444444444456666667765321 1 1111 22332 35666
Q ss_pred chHHHHHHHHHhcc-----CCccccCCCCCHHHHHHHHHHHHhcccCCCCccccC
Q 031897 77 CTAEALLCCLHFSM-----MRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAWE 126 (151)
Q Consensus 77 ~Ta~al~aL~~~~~-----~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~~ 126 (151)
..+.-..+|....+ ..... -.....+.|++.++|+...=+.- +++-+|
T Consensus 126 G~al~~~al~~~~~~l~~~~~~~~-~~~~~w~~v~~~~d~v~~~w~~p-d~dlWE 178 (472)
T d1gaia_ 126 GPALRATAMIGFGQWLLDNGYTSA-ATEIVWPLVRNDLSYVAQYWNQT-GYDLWE 178 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHH-HHHTHHHHHHHHHHHHHHHTTSC-EECTTS
T ss_pred cHHHHHHHHHHHHHHHHHcCCcch-hhHHHHHHHHHHHHHHHHhCCCc-cCCCCc
Confidence 66655555544321 00000 00112467899999998763321 244444
No 50
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]}
Probab=50.40 E-value=6 Score=31.13 Aligned_cols=21 Identities=0% Similarity=0.011 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhcccCCCCc
Q 031897 102 PERFYDAVNCILSLQSETGGV 122 (151)
Q Consensus 102 ~~~l~rav~~Ll~~Qn~dGGW 122 (151)
-+.++=+++||++||.++|++
T Consensus 94 LdE~~wglD~llkmq~~~g~~ 114 (460)
T d1tf4a1 94 KDNLRWVNDYFIKAHPSPNVL 114 (460)
T ss_dssp HHHHHHHHHHHHHTCSBTTBE
T ss_pred HHHHHHHHHHHHhcccCCCeE
Confidence 356777899999999999865
No 51
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=50.26 E-value=6.4 Score=29.80 Aligned_cols=42 Identities=19% Similarity=0.161 Sum_probs=23.6
Q ss_pred hHHHHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcc--cCCCCcc
Q 031897 78 TAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQ--SETGGVP 123 (151)
Q Consensus 78 Ta~al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Q--n~dGGW~ 123 (151)
-+++|.|++.+.+.- |.+...+..++..+|+.+.- ...|+|=
T Consensus 316 qaE~i~a~l~ly~~t----gd~~~l~~a~~l~~~~~~~f~D~~~G~W~ 359 (402)
T d1fp3a_ 316 HSEAMIAFLMGYSES----GDPALLRLFYQVAEYTFRQFRDPEYGEWF 359 (402)
T ss_dssp HHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHTBCTTTSSBC
T ss_pred HHHHHHHHHHHHHcc----CCHHHHHHHHHHHHHHHHhCCCCCCCeeE
Confidence 688899988875422 32323334455555555432 2368884
No 52
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=38.73 E-value=1.3 Score=22.54 Aligned_cols=14 Identities=14% Similarity=0.076 Sum_probs=11.3
Q ss_pred HHHhcccCCCCccc
Q 031897 111 CILSLQSETGGVPA 124 (151)
Q Consensus 111 ~Ll~~Qn~dGGW~~ 124 (151)
||-..|.+||.|.-
T Consensus 10 ~i~atqRpDGtWRK 23 (33)
T d1rk8c_ 10 FIPATKRPDGTWRK 23 (33)
T ss_dssp EECCEECTTSCEEC
T ss_pred EeccccCCCCcccc
Confidence 45678999999974
No 53
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.40 E-value=24 Score=18.47 Aligned_cols=25 Identities=24% Similarity=0.248 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHh
Q 031897 10 DCALAIQALLACNLTDEIGPILMKAHDFLKA 40 (151)
Q Consensus 10 dTala~~AL~~~G~~~~~~~~i~rA~~~L~~ 40 (151)
|...-+.||.+++= + |.+|++.|++
T Consensus 16 d~~~Ni~AL~~t~G--d----v~~Aie~Ll~ 40 (41)
T d2daha1 16 NREANLQALIATGG--D----VDAAVEKLRQ 40 (41)
T ss_dssp CHHHHHHHHHHHTS--C----HHHHHHHHHH
T ss_pred CHHHHHHHHHHcCC--C----HHHHHHHHHh
Confidence 34455666666542 1 7888988876
No 54
>d2k0bx1 a.5.2.1 (X:1-52) Sequestosome 1 (Sqstm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.43 E-value=18 Score=20.11 Aligned_cols=28 Identities=18% Similarity=0.338 Sum_probs=19.5
Q ss_pred CCCCCccHHHHHHHHHHHhhccCCCCCCCc
Q 031897 22 NLTDEIGPILMKAHDFLKASQVTDNPQGDF 51 (151)
Q Consensus 22 G~~~~~~~~i~rA~~~L~~~Q~~~~~~G~~ 51 (151)
|.+++.+|.|..|+.=++++--.+ +|+|
T Consensus 1 ~~pp~~dp~l~~al~qM~aMGFsn--eGGW 28 (52)
T d2k0bx1 1 GSPPEADPRLIESLSQMLSMGFSD--EGGW 28 (52)
T ss_dssp CCCTTTSTTHHHHHHHHHHHTCCC--SSSC
T ss_pred CCCcccChHHHHHHHHHHHcCCCC--cchH
Confidence 445555788899988888877665 4544
No 55
>d2cosa1 a.5.2.1 (A:8-48) Serine/threonine protein kinase LATS2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.96 E-value=14 Score=19.25 Aligned_cols=26 Identities=19% Similarity=0.193 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHh
Q 031897 10 DCALAIQALLACNLTDEIGPILMKAHDFLKA 40 (151)
Q Consensus 10 dTala~~AL~~~G~~~~~~~~i~rA~~~L~~ 40 (151)
|--.++.||...|. ..|+.|++|+.+
T Consensus 15 D~~m~iral~qt~~-----rsieaaie~isk 40 (41)
T d2cosa1 15 DQEMAGRALKQTGS-----RSIEAALEYISK 40 (41)
T ss_dssp CHHHHHHHHHHHTS-----CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCc-----ccHHHHHHHHhc
Confidence 34467777777774 348889998854
No 56
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.75 E-value=27 Score=18.58 Aligned_cols=25 Identities=24% Similarity=0.121 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHh
Q 031897 10 DCALAIQALLACNLTDEIGPILMKAHDFLKA 40 (151)
Q Consensus 10 dTala~~AL~~~G~~~~~~~~i~rA~~~L~~ 40 (151)
|...-+.||.+++=+ |.+|++.|++
T Consensus 19 d~~~Ni~AL~~t~Gd------V~~Aie~Ll~ 43 (44)
T d2bwba1 19 DFDRNVAALRRSGGS------VQGALDSLLN 43 (44)
T ss_dssp CHHHHHHHHHHHTTC------HHHHHHHHHC
T ss_pred cHHHHHHHHHHcCCC------HHHHHHHHhC
Confidence 556667777776522 7888888864
No 57
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]}
Probab=29.10 E-value=1e+02 Score=22.79 Aligned_cols=44 Identities=11% Similarity=0.022 Sum_probs=28.1
Q ss_pred hHHHHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcc--cCCCCcccc
Q 031897 78 TAEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQ--SETGGVPAW 125 (151)
Q Consensus 78 Ta~al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Q--n~dGGW~~~ 125 (151)
-+++|.|++.+.+.- |.+...+..++..+|+...- ...|||=-.
T Consensus 317 qaEai~a~l~ly~~t----gd~~yl~~a~~~~~~~~~~f~D~~~G~W~~~ 362 (411)
T d2afaa1 317 IVEAMGTAYALYTLT----DDSQYEEWYQKWWDYCIKYLMDYENGSWWQE 362 (411)
T ss_dssp HHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHTBCTTTSSBCSE
T ss_pred HHHHHHHHHHHHHhh----CCHHHHHHHHHHHHHHHHhCCCCCCCeeeee
Confidence 588999999876532 33444556666677776643 346998544
No 58
>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=28.66 E-value=26 Score=19.37 Aligned_cols=20 Identities=25% Similarity=0.190 Sum_probs=15.3
Q ss_pred HHHHHHcCCCCCccHHHHHHHHHHHh
Q 031897 15 IQALLACNLTDEIGPILMKAHDFLKA 40 (151)
Q Consensus 15 ~~AL~~~G~~~~~~~~i~rA~~~L~~ 40 (151)
=.||.+++-+ +.+|++||+.
T Consensus 21 KkAL~e~~gD------~ekA~e~Lr~ 40 (52)
T d1aipc1 21 KRALEDAGWD------EEKAVQLLRE 40 (52)
T ss_dssp HHHHHHTTTC------HHHHHHHHHH
T ss_pred HHHHHHcCCC------HHHHHHHHHH
Confidence 4577777743 7999999975
No 59
>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.39 E-value=29 Score=19.26 Aligned_cols=19 Identities=21% Similarity=0.179 Sum_probs=14.2
Q ss_pred HHHHHcCCCCCccHHHHHHHHHHHh
Q 031897 16 QALLACNLTDEIGPILMKAHDFLKA 40 (151)
Q Consensus 16 ~AL~~~G~~~~~~~~i~rA~~~L~~ 40 (151)
.||.+++-+ +.+|++||+.
T Consensus 24 kAL~e~~gD------~ekA~e~Lr~ 42 (54)
T d1efub3 24 KALTEANGD------IELAIENMRK 42 (54)
T ss_dssp HHHHHTTTC------HHHHHHHHHH
T ss_pred HHHHHcCCC------HHHHHHHHHH
Confidence 567776642 7899999986
No 60
>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=25.89 E-value=30 Score=19.37 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=15.3
Q ss_pred HHHHHHcCCCCCccHHHHHHHHHHHhh
Q 031897 15 IQALLACNLTDEIGPILMKAHDFLKAS 41 (151)
Q Consensus 15 ~~AL~~~G~~~~~~~~i~rA~~~L~~~ 41 (151)
=.||.+++-+ +.+|++||+.+
T Consensus 23 KkAL~e~~gD------~ekA~e~Lrkk 43 (56)
T d1xb2b1 23 KKALETCGGD------LKQAESWLHKQ 43 (56)
T ss_dssp HHHHHHTTTC------HHHHHHHHHHH
T ss_pred HHHHHHcCCC------HHHHHHHHHHH
Confidence 3567777642 78999999863
No 61
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}
Probab=25.68 E-value=30 Score=23.91 Aligned_cols=30 Identities=20% Similarity=0.372 Sum_probs=22.9
Q ss_pred CCCCCHHHHHHHHHHHHhcccC---------CCCccccC
Q 031897 97 GEKMEPERFYDAVNCILSLQSE---------TGGVPAWE 126 (151)
Q Consensus 97 g~~~~~~~l~rav~~Ll~~Qn~---------dGGW~~~~ 126 (151)
++-...+-+..+|-||.+-.+. ||||..|.
T Consensus 195 ~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~~p 233 (234)
T d1o5ia_ 195 RRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSKFP 233 (234)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCCC
T ss_pred CCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcccccCC
Confidence 4444678899999999976553 89998874
No 62
>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.53 E-value=65 Score=19.68 Aligned_cols=37 Identities=14% Similarity=0.093 Sum_probs=26.9
Q ss_pred HHHHHHHHHhccCCccccCCCCCHHHHHHHHHHHHhcccCCCCccccCCC
Q 031897 79 AEALLCCLHFSMMRPEIVGEKMEPERFYDAVNCILSLQSETGGVPAWEPT 128 (151)
Q Consensus 79 a~al~aL~~~~~~~~~~~g~~~~~~~l~rav~~Ll~~Qn~dGGW~~~~~~ 128 (151)
.+++.||..... .+.+||++|+.-=.....|-+-.+.
T Consensus 48 de~~~ALhDcn~-------------D~~~AIn~lLEg~~~~~~Wet~~kK 84 (91)
T d1wj7a1 48 DECVIALHDCNG-------------DVNRAINVLLEGNPDTHSWEMVGKK 84 (91)
T ss_dssp HHHHHHHHHHTS-------------CHHHHHHHHHTCSSSCSSCSSCCCC
T ss_pred HHHHHHHhcCCc-------------cHHHHHHHHHhcCCCCCceeecccc
Confidence 588899988742 2689999999764445688776543
No 63
>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.09 E-value=38 Score=19.26 Aligned_cols=25 Identities=24% Similarity=0.263 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHh
Q 031897 10 DCALAIQALLACNLTDEIGPILMKAHDFLKA 40 (151)
Q Consensus 10 dTala~~AL~~~G~~~~~~~~i~rA~~~L~~ 40 (151)
|....+.||.++|=+ |.+|+++|+.
T Consensus 36 d~~~Nl~AL~~t~Gd------v~~Aie~Ll~ 60 (61)
T d1veja1 36 NRDANLQALVATDGD------IHAAIEMLLG 60 (61)
T ss_dssp CHHHHHHHHHHTTSC------HHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCC------HHHHHHHHhc
Confidence 445556666666522 7888888874
No 64
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]}
Probab=24.30 E-value=17 Score=28.08 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhcccCCCCcccc
Q 031897 102 PERFYDAVNCILSLQSETGGVPAW 125 (151)
Q Consensus 102 ~~~l~rav~~Ll~~Qn~dGGW~~~ 125 (151)
-+.++=+++||++||.++|....+
T Consensus 111 Lde~kwg~D~llk~~~~~g~g~v~ 134 (441)
T d1clca1 111 LDELKYEIDWILTMQYPDGSGRVA 134 (441)
T ss_dssp HHHHHHHHHHHHTTBCTTSSCCBE
T ss_pred HHHHHHHHHHHHHhcccCCCceee
Confidence 456888999999999988764443
No 65
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]}
Probab=22.76 E-value=19 Score=27.70 Aligned_cols=69 Identities=7% Similarity=0.078 Sum_probs=36.6
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCcccccCCCCCccccccCCCCCcccccchHHHHHHHHHhccCCccccCCCCCHHHHH
Q 031897 27 IGPILMKAHDFLKASQVTDNPQGDFRSMFRHISKGGWTFSNKDHGWQVSDCTAEALLCCLHFSMMRPEIVGEKMEPERFY 106 (151)
Q Consensus 27 ~~~~i~rA~~~L~~~Q~~~~~~G~~~~~~~~~~~GgW~fs~~~~~~pd~d~Ta~al~aL~~~~~~~~~~~g~~~~~~~l~ 106 (151)
+...+++.+++|++.+... +.+.. + ...|+ +.......++.+++.... . .+.........
T Consensus 273 ~~~~~~~~~~~~~~~~~~~--~~g~~--~----~~~WG--------sn~~~~n~a~~~~~a~~~-~---~~~~~y~~~A~ 332 (433)
T d1ks8a_ 273 YKDTVQSYVNYLINNQQKT--PKGLL--Y----IDMWG--------TLRHAANAAFIMLEAAEL-G---LSASSYRQFAQ 332 (433)
T ss_dssp HHHHHHHHHHHHHHTSCBC--TTSCB--C----CCSTT--------HHHHHHHHHHHHHHHHHT-T---SSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCC--CCCce--e----cCCcc--------hhHHHHHHHHHHHHHhhc-C---CCHHHHHHHHH
Confidence 5677888888888766542 22111 0 12233 222234445555444321 1 12223456788
Q ss_pred HHHHHHHhc
Q 031897 107 DAVNCILSL 115 (151)
Q Consensus 107 rav~~Ll~~ 115 (151)
+.++||+..
T Consensus 333 ~qldylLG~ 341 (433)
T d1ks8a_ 333 TQIDYALGD 341 (433)
T ss_dssp HHHHHHHTT
T ss_pred HhHhhccCC
Confidence 889999985
No 66
>d1ctja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Monoraphidium braunii [TaxId: 34112]}
Probab=20.85 E-value=30 Score=19.84 Aligned_cols=24 Identities=0% Similarity=0.140 Sum_probs=19.3
Q ss_pred CCCCCHHHHHHHHHHHHhcccCCC
Q 031897 97 GEKMEPERFYDAVNCILSLQSETG 120 (151)
Q Consensus 97 g~~~~~~~l~rav~~Ll~~Qn~dG 120 (151)
+..+.++.|..-+.||+++...++
T Consensus 65 ~~~Lsd~ei~~v~~Yi~~~~~~~~ 88 (89)
T d1ctja_ 65 DGRLDEDEIAGVAAYVYDQAAGNK 88 (89)
T ss_dssp BTTBCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHccCCC
Confidence 445789999999999999776554
Done!