Query 031899
Match_columns 151
No_of_seqs 253 out of 1764
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 10:47:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031899.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031899hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 100.0 6.6E-32 2.3E-36 172.6 8.5 99 40-151 2-102 (103)
2 1tq1_A AT5G66040, senescence-a 100.0 1.5E-31 5.2E-36 177.4 10.0 115 37-151 15-129 (129)
3 3foj_A Uncharacterized protein 100.0 9.6E-31 3.3E-35 166.4 8.5 97 40-149 2-100 (100)
4 3eme_A Rhodanese-like domain p 100.0 1E-30 3.5E-35 167.0 8.7 99 40-151 2-102 (103)
5 3gk5_A Uncharacterized rhodane 100.0 3.9E-30 1.3E-34 165.7 11.3 99 39-151 3-101 (108)
6 1urh_A 3-mercaptopyruvate sulf 100.0 1.4E-29 4.7E-34 187.6 11.1 146 6-151 108-278 (280)
7 1gmx_A GLPE protein; transfera 100.0 1.7E-29 5.8E-34 162.6 9.3 99 39-150 4-103 (108)
8 1e0c_A Rhodanese, sulfurtransf 100.0 3.3E-29 1.1E-33 184.7 12.0 146 6-151 103-271 (271)
9 3hzu_A Thiosulfate sulfurtrans 100.0 6.9E-29 2.4E-33 187.0 12.7 146 5-151 132-308 (318)
10 3d1p_A Putative thiosulfate su 100.0 1.1E-28 3.7E-33 165.5 12.2 113 38-151 21-138 (139)
11 1rhs_A Sulfur-substituted rhod 100.0 4.3E-29 1.5E-33 186.3 11.0 145 6-150 116-287 (296)
12 3hix_A ALR3790 protein; rhodan 100.0 2.8E-29 9.4E-34 161.2 8.3 94 46-150 2-98 (106)
13 3ilm_A ALR3790 protein; rhodan 100.0 5.5E-29 1.9E-33 167.4 9.7 98 42-150 2-102 (141)
14 1uar_A Rhodanese; sulfurtransf 100.0 1.5E-28 5.2E-33 182.3 12.8 146 6-151 101-282 (285)
15 3olh_A MST, 3-mercaptopyruvate 100.0 1.1E-28 3.7E-33 184.7 11.2 145 5-149 130-299 (302)
16 2hhg_A Hypothetical protein RP 100.0 2.3E-28 7.8E-33 163.8 11.3 102 38-151 20-133 (139)
17 1qxn_A SUD, sulfide dehydrogen 100.0 1.6E-28 5.4E-33 164.4 9.9 104 38-151 21-129 (137)
18 3aay_A Putative thiosulfate su 100.0 4E-28 1.4E-32 179.4 11.9 145 6-151 99-275 (277)
19 1wv9_A Rhodanese homolog TT165 99.9 9.4E-29 3.2E-33 155.4 4.8 93 40-146 2-94 (94)
20 3flh_A Uncharacterized protein 99.9 4.8E-28 1.6E-32 159.5 8.2 100 39-151 14-119 (124)
21 3nhv_A BH2092 protein; alpha-b 99.9 7.1E-28 2.4E-32 162.5 8.0 100 40-151 16-120 (144)
22 2k0z_A Uncharacterized protein 99.9 2.3E-27 7.9E-32 153.2 7.3 87 52-151 14-102 (110)
23 1yt8_A Thiosulfate sulfurtrans 99.9 1.2E-26 4.1E-31 185.5 12.6 133 6-151 343-477 (539)
24 2fsx_A RV0390, COG0607: rhodan 99.9 1.3E-26 4.5E-31 156.9 9.1 110 39-151 4-139 (148)
25 3tp9_A Beta-lactamase and rhod 99.9 1.5E-26 5.2E-31 182.3 10.5 128 6-151 346-474 (474)
26 2eg4_A Probable thiosulfate su 99.9 7E-26 2.4E-30 163.4 11.3 128 8-151 84-230 (230)
27 2wlr_A Putative thiosulfate su 99.9 8.1E-26 2.8E-30 176.0 11.9 146 6-151 224-406 (423)
28 1e0c_A Rhodanese, sulfurtransf 99.9 1.7E-25 5.7E-30 164.8 12.4 113 39-151 8-129 (271)
29 1t3k_A Arath CDC25, dual-speci 99.9 1.6E-26 5.4E-31 157.2 5.8 106 38-151 26-141 (152)
30 3hzu_A Thiosulfate sulfurtrans 99.9 4.7E-25 1.6E-29 166.1 11.6 113 39-151 39-159 (318)
31 2wlr_A Putative thiosulfate su 99.9 4.8E-25 1.7E-29 171.7 11.9 140 6-151 96-250 (423)
32 3g5j_A Putative ATP/GTP bindin 99.9 1.9E-25 6.6E-30 148.2 8.2 104 39-145 4-130 (134)
33 1urh_A 3-mercaptopyruvate sulf 99.9 4.8E-25 1.6E-29 163.1 11.2 111 40-150 4-133 (280)
34 3i2v_A Adenylyltransferase and 99.9 1.3E-25 4.4E-30 147.9 7.1 106 41-150 2-124 (127)
35 2jtq_A Phage shock protein E; 99.9 1E-25 3.6E-30 138.9 5.8 77 55-144 2-80 (85)
36 1okg_A Possible 3-mercaptopyru 99.9 2.5E-26 8.6E-31 176.3 3.1 140 5-150 117-293 (373)
37 1vee_A Proline-rich protein fa 99.9 2.1E-25 7.2E-30 148.7 7.0 106 39-150 4-123 (134)
38 1rhs_A Sulfur-substituted rhod 99.9 5.7E-24 1.9E-28 158.6 13.1 113 39-151 7-142 (296)
39 3aay_A Putative thiosulfate su 99.9 2.5E-24 8.6E-29 159.0 10.4 112 40-151 6-125 (277)
40 3olh_A MST, 3-mercaptopyruvate 99.9 1.1E-23 3.7E-28 157.7 12.8 114 38-151 20-157 (302)
41 1qb0_A Protein (M-phase induce 99.9 9.9E-24 3.4E-28 150.5 11.3 101 38-149 42-167 (211)
42 1uar_A Rhodanese; sulfurtransf 99.9 2.2E-24 7.6E-29 159.9 8.2 111 40-150 8-126 (285)
43 2a2k_A M-phase inducer phospha 99.9 1.2E-23 4E-28 146.0 10.6 101 38-149 22-147 (175)
44 1c25_A CDC25A; hydrolase, cell 99.9 7.4E-24 2.5E-28 145.1 9.3 101 38-149 21-145 (161)
45 1yt8_A Thiosulfate sulfurtrans 99.9 8.9E-24 3E-28 168.9 10.5 134 6-151 84-234 (539)
46 1okg_A Possible 3-mercaptopyru 99.9 1.3E-23 4.5E-28 161.2 8.9 110 39-150 13-142 (373)
47 2vsw_A Dual specificity protei 99.9 7.4E-24 2.5E-28 143.9 6.6 109 40-148 4-130 (153)
48 2j6p_A SB(V)-AS(V) reductase; 99.9 3.7E-23 1.3E-27 140.5 9.9 103 39-149 4-120 (152)
49 3utn_X Thiosulfate sulfurtrans 99.9 1E-22 3.6E-27 153.4 13.2 140 8-148 137-319 (327)
50 4f67_A UPF0176 protein LPG2838 99.9 5.8E-23 2E-27 150.6 10.0 101 38-146 120-223 (265)
51 2ouc_A Dual specificity protei 99.9 2.9E-23 9.8E-28 138.9 7.6 108 41-150 2-137 (142)
52 3op3_A M-phase inducer phospha 99.9 1.2E-22 4.1E-27 145.1 11.0 98 38-146 55-177 (216)
53 3f4a_A Uncharacterized protein 99.9 5E-23 1.7E-27 142.2 4.5 107 38-150 29-157 (169)
54 1hzm_A Dual specificity protei 99.9 2.3E-22 7.8E-27 136.6 5.2 105 39-145 15-142 (154)
55 3tg1_B Dual specificity protei 99.9 3E-21 1E-25 131.9 9.9 104 37-145 8-142 (158)
56 3ics_A Coenzyme A-disulfide re 99.9 1E-21 3.4E-26 158.2 8.8 96 37-145 486-581 (588)
57 3ntd_A FAD-dependent pyridine 99.9 3.9E-22 1.3E-26 159.7 5.5 95 38-146 471-565 (565)
58 3r2u_A Metallo-beta-lactamase 99.8 2.8E-22 9.4E-27 157.9 0.7 86 47-144 379-465 (466)
59 2eg4_A Probable thiosulfate su 99.8 1.6E-20 5.4E-25 135.3 7.8 92 53-150 5-102 (230)
60 3utn_X Thiosulfate sulfurtrans 99.8 1.5E-19 5E-24 136.3 11.9 112 38-150 26-159 (327)
61 2gwf_A Ubiquitin carboxyl-term 99.8 1.6E-19 5.5E-24 123.1 8.6 111 38-149 18-149 (157)
62 1whb_A KIAA0055; deubiqutinati 99.8 1.7E-19 5.9E-24 123.0 8.5 110 37-149 12-144 (157)
63 3tp9_A Beta-lactamase and rhod 99.8 1.1E-19 3.8E-24 143.2 7.0 102 37-150 270-371 (474)
64 3r2u_A Metallo-beta-lactamase 99.5 1.1E-14 3.7E-19 114.6 8.1 80 53-143 295-375 (466)
65 2f46_A Hypothetical protein; s 98.4 1.2E-06 4.2E-11 58.9 7.3 84 42-130 30-129 (156)
66 4erc_A Dual specificity protei 95.9 0.02 6.8E-07 37.3 5.8 84 43-130 24-117 (150)
67 2img_A Dual specificity protei 95.3 0.045 1.6E-06 35.5 5.8 83 43-129 25-117 (151)
68 1xri_A AT1G05000; structural g 95.1 0.057 1.9E-06 35.3 5.8 87 43-130 22-120 (151)
69 1v8c_A MOAD related protein; r 94.6 0.0046 1.6E-07 42.0 -0.6 24 55-82 122-145 (168)
70 1fpz_A Cyclin-dependent kinase 94.0 0.19 6.6E-06 34.8 6.8 83 43-129 60-162 (212)
71 2nt2_A Protein phosphatase sli 93.9 0.13 4.4E-06 33.3 5.4 80 47-129 22-109 (145)
72 1ywf_A Phosphotyrosine protein 93.8 0.47 1.6E-05 34.8 8.7 43 38-80 52-101 (296)
73 2hcm_A Dual specificity protei 93.5 0.11 3.8E-06 34.4 4.6 79 47-130 30-118 (164)
74 1yz4_A DUSP15, dual specificit 93.2 0.2 6.7E-06 33.0 5.4 81 47-130 26-113 (160)
75 2r0b_A Serine/threonine/tyrosi 92.9 0.43 1.5E-05 31.0 6.8 85 46-130 25-119 (154)
76 3ezz_A Dual specificity protei 92.9 0.48 1.6E-05 30.5 6.9 81 48-129 23-109 (144)
77 1wrm_A Dual specificity phosph 92.7 0.24 8.2E-06 32.9 5.4 80 47-129 25-111 (165)
78 2jgn_A DBX, DDX3, ATP-dependen 92.4 0.29 1E-05 33.1 5.5 46 94-140 36-81 (185)
79 3rgo_A Protein-tyrosine phosph 92.0 0.26 9E-06 32.0 4.8 82 46-130 19-118 (157)
80 2esb_A Dual specificity protei 92.0 0.41 1.4E-05 32.5 5.9 78 48-130 39-126 (188)
81 2wgp_A Dual specificity protei 91.6 0.48 1.6E-05 32.3 5.9 81 47-129 44-131 (190)
82 3s4o_A Protein tyrosine phosph 90.5 2.4 8.3E-05 27.5 8.6 28 103-130 108-138 (167)
83 1zzw_A Dual specificity protei 90.5 0.37 1.3E-05 31.2 4.3 28 102-129 81-111 (149)
84 3s4e_A Dual specificity protei 90.3 0.87 3E-05 29.3 6.0 76 48-129 23-109 (144)
85 3rz2_A Protein tyrosine phosph 90.1 1.6 5.3E-05 29.5 7.4 86 39-129 45-144 (189)
86 2g6z_A Dual specificity protei 89.7 0.68 2.3E-05 32.3 5.4 28 102-129 81-111 (211)
87 3f81_A Dual specificity protei 89.6 0.82 2.8E-05 30.6 5.6 26 104-129 115-143 (183)
88 2rb4_A ATP-dependent RNA helic 88.3 0.84 2.9E-05 30.3 4.9 37 103-140 33-69 (175)
89 1t5i_A C_terminal domain of A 87.7 1 3.4E-05 29.9 5.0 45 94-140 22-66 (172)
90 1fuk_A Eukaryotic initiation f 87.2 1.2 4E-05 29.2 5.1 45 94-140 21-65 (165)
91 2y96_A Dual specificity phosph 87.2 5.4 0.00019 27.7 8.7 28 102-129 137-167 (219)
92 2e0t_A Dual specificity phosph 87.1 0.69 2.4E-05 29.9 3.8 28 103-130 84-114 (151)
93 2hjv_A ATP-dependent RNA helic 86.8 0.68 2.3E-05 30.4 3.7 37 103-140 34-70 (163)
94 2pq5_A Dual specificity protei 86.7 4.5 0.00016 27.6 8.0 27 103-129 130-159 (205)
95 3hh1_A Tetrapyrrole methylase 86.2 2.9 0.0001 25.9 6.3 94 37-137 16-116 (117)
96 2q05_A Late protein H1, dual s 85.5 2.4 8.3E-05 28.8 6.0 29 102-130 123-154 (195)
97 3emu_A Leucine rich repeat and 85.1 1.2 4.2E-05 29.3 4.3 29 102-130 85-116 (161)
98 3kwp_A Predicted methyltransfe 84.6 6.7 0.00023 28.7 8.4 107 37-150 26-141 (296)
99 1jzt_A Hypothetical 27.5 kDa p 84.4 5.9 0.0002 28.2 7.8 30 105-135 59-91 (246)
100 2i4i_A ATP-dependent RNA helic 84.0 2.1 7.1E-05 32.0 5.6 46 94-140 266-311 (417)
101 3hix_A ALR3790 protein; rhodan 82.9 0.14 4.9E-06 31.4 -1.1 23 5-27 72-94 (106)
102 3cm3_A Late protein H1, dual s 82.6 2.4 8.2E-05 28.2 5.0 28 103-130 107-137 (176)
103 2p6n_A ATP-dependent RNA helic 82.4 1.8 6.2E-05 29.3 4.3 36 104-140 54-89 (191)
104 3d3k_A Enhancer of mRNA-decapp 82.4 2.1 7.2E-05 30.8 4.8 30 105-135 86-118 (259)
105 3d3j_A Enhancer of mRNA-decapp 82.0 2.2 7.4E-05 31.5 4.8 30 105-135 133-165 (306)
106 3rss_A Putative uncharacterize 81.4 3.7 0.00013 32.5 6.3 46 103-149 51-109 (502)
107 2o8n_A APOA-I binding protein; 81.1 2.4 8.2E-05 30.7 4.7 30 105-135 80-112 (265)
108 2v1x_A ATP-dependent DNA helic 80.9 2.6 8.8E-05 33.9 5.3 37 103-140 266-302 (591)
109 3eaq_A Heat resistant RNA depe 80.3 1.5 5.1E-05 30.2 3.3 37 103-140 30-66 (212)
110 1ohe_A CDC14B, CDC14B2 phospha 78.6 18 0.00063 27.0 9.1 81 44-129 208-297 (348)
111 2i6j_A Ssoptp, sulfolobus solf 77.8 11 0.00038 24.1 7.9 24 43-66 17-41 (161)
112 1s4d_A Uroporphyrin-III C-meth 77.1 15 0.0005 26.4 7.9 110 37-149 25-143 (280)
113 4fak_A Ribosomal RNA large sub 77.0 4.8 0.00016 26.9 4.9 45 95-139 65-114 (163)
114 3to5_A CHEY homolog; alpha(5)b 77.0 5.9 0.0002 25.2 5.2 42 102-143 10-51 (134)
115 4h3k_B RNA polymerase II subun 75.8 4.1 0.00014 28.3 4.3 30 106-136 27-57 (214)
116 2ybo_A Methyltransferase; SUMT 74.3 14 0.00049 26.8 7.3 111 37-149 35-153 (294)
117 3i32_A Heat resistant RNA depe 74.2 4.3 0.00015 29.7 4.5 44 94-139 19-62 (300)
118 4a29_A Engineered retro-aldol 74.2 15 0.00052 26.4 7.1 76 55-132 155-230 (258)
119 1ve2_A Uroporphyrin-III C-meth 73.3 20 0.00069 24.8 8.4 109 37-149 13-129 (235)
120 2d7d_A Uvrabc system protein B 72.4 5.9 0.0002 32.3 5.2 44 95-139 436-479 (661)
121 1xti_A Probable ATP-dependent 71.9 6.9 0.00024 28.8 5.2 37 103-140 249-285 (391)
122 1oyw_A RECQ helicase, ATP-depe 71.7 3.6 0.00012 32.5 3.7 37 103-140 235-271 (523)
123 2hxp_A Dual specificity protei 71.1 5.8 0.0002 25.7 4.2 28 102-129 83-113 (155)
124 3p9y_A CG14216, LD40846P; phos 70.7 6.6 0.00023 27.0 4.3 31 105-136 10-41 (198)
125 1rxd_A Protein tyrosine phosph 70.7 14 0.00048 23.4 6.0 87 38-129 23-123 (159)
126 1c4o_A DNA nucleotide excision 70.5 5.2 0.00018 32.6 4.5 38 101-139 436-473 (664)
127 1to0_A Hypothetical UPF0247 pr 70.3 8.1 0.00028 25.9 4.7 47 93-139 59-110 (167)
128 3ndc_A Precorrin-4 C(11)-methy 70.0 27 0.00091 24.8 7.9 106 37-149 14-127 (264)
129 2yjt_D ATP-dependent RNA helic 72.8 0.92 3.2E-05 30.0 0.0 37 103-140 29-65 (170)
130 3nme_A Ptpkis1 protein, SEX4 g 69.3 6.9 0.00023 28.5 4.6 24 43-66 28-52 (294)
131 3nbm_A PTS system, lactose-spe 68.4 5.2 0.00018 24.7 3.3 32 102-134 4-39 (108)
132 3gxh_A Putative phosphatase (D 67.1 23 0.00077 22.9 8.3 85 41-130 27-124 (157)
133 3czc_A RMPB; alpha/beta sandwi 66.8 17 0.00058 22.2 5.4 26 105-130 19-49 (110)
134 1wyz_A Putative S-adenosylmeth 66.2 14 0.00048 25.9 5.6 107 41-149 20-135 (242)
135 1hv8_A Putative ATP-dependent 65.8 6.3 0.00022 28.6 3.9 46 94-140 227-273 (367)
136 2oud_A Dual specificity protei 65.8 9 0.00031 25.4 4.3 28 102-129 85-115 (177)
137 3v0d_A Voltage-sensor containi 65.8 8.1 0.00028 28.9 4.4 83 43-129 51-146 (339)
138 3pey_A ATP-dependent RNA helic 65.7 6 0.0002 29.1 3.7 37 103-140 242-278 (395)
139 1wp9_A ATP-dependent RNA helic 65.4 11 0.00039 28.1 5.3 35 102-137 359-393 (494)
140 4e16_A Precorrin-4 C(11)-methy 65.2 33 0.0011 24.1 8.0 106 37-149 15-128 (253)
141 3fht_A ATP-dependent RNA helic 65.0 6 0.0002 29.3 3.6 36 103-139 265-300 (412)
142 2j0s_A ATP-dependent RNA helic 64.6 6.2 0.00021 29.4 3.7 36 104-140 276-311 (410)
143 1s2m_A Putative ATP-dependent 64.6 5.7 0.0002 29.4 3.5 37 103-140 257-293 (400)
144 3ohg_A Uncharacterized protein 64.2 9.4 0.00032 27.8 4.4 26 114-139 218-243 (285)
145 3fwz_A Inner membrane protein 63.6 10 0.00036 23.8 4.2 29 108-137 10-38 (140)
146 1pjq_A CYSG, siroheme synthase 63.1 30 0.001 26.7 7.4 111 37-149 226-344 (457)
147 3i5x_A ATP-dependent RNA helic 63.0 11 0.00036 29.6 4.9 38 102-140 337-377 (563)
148 2dy0_A APRT, adenine phosphori 63.0 12 0.00041 25.1 4.6 48 102-149 124-181 (190)
149 2p1z_A Phosphoribosyltransfera 62.2 13 0.00045 24.7 4.6 48 102-149 112-168 (180)
150 3jux_A Protein translocase sub 61.8 8.6 0.00029 32.2 4.2 37 103-140 473-509 (822)
151 2l2q_A PTS system, cellobiose- 61.6 4 0.00014 25.0 1.8 28 103-130 3-34 (109)
152 2db3_A ATP-dependent RNA helic 61.5 13 0.00045 28.2 5.0 34 106-140 302-335 (434)
153 3tsm_A IGPS, indole-3-glycerol 61.1 29 0.00099 25.0 6.5 89 42-132 153-246 (272)
154 3sqw_A ATP-dependent RNA helic 60.2 12 0.00042 29.5 4.8 38 102-140 286-326 (579)
155 1va0_A Uroporphyrin-III C-meth 60.0 40 0.0014 23.3 8.5 108 37-149 11-122 (239)
156 2fsf_A Preprotein translocase 58.6 17 0.00058 30.8 5.4 38 102-140 439-476 (853)
157 1o6d_A Hypothetical UPF0247 pr 58.3 16 0.00054 24.3 4.3 47 94-141 55-106 (163)
158 1tf5_A Preprotein translocase 57.5 9.2 0.00032 32.3 3.7 37 103-140 431-467 (844)
159 2wns_A Orotate phosphoribosylt 57.3 18 0.00063 24.6 4.8 48 102-149 109-165 (205)
160 3eiq_A Eukaryotic initiation f 57.1 7.6 0.00026 28.8 3.0 37 103-140 279-315 (414)
161 3m3h_A OPRT, oprtase, orotate 56.8 18 0.00062 25.5 4.7 49 101-149 134-192 (234)
162 1e2b_A Enzyme IIB-cellobiose; 56.1 10 0.00034 23.2 2.9 26 105-130 4-33 (106)
163 1vch_A Phosphoribosyltransfera 55.6 16 0.00054 24.0 4.1 32 103-134 119-153 (175)
164 1vdm_A Purine phosphoribosyltr 55.2 13 0.00045 23.8 3.6 32 103-134 82-116 (153)
165 3o8b_A HCV NS3 protease/helica 55.1 11 0.00038 30.9 3.7 37 103-140 395-431 (666)
166 4ea9_A Perosamine N-acetyltran 55.0 18 0.00061 24.7 4.4 46 103-149 11-56 (220)
167 1yn9_A BVP, polynucleotide 5'- 55.0 25 0.00087 22.7 5.0 28 103-130 112-142 (169)
168 3n0a_A Tyrosine-protein phosph 54.5 39 0.0013 25.5 6.4 72 53-129 62-142 (361)
169 2yzk_A OPRT, oprtase, orotate 54.5 21 0.0007 23.7 4.5 47 103-149 105-160 (178)
170 1i5e_A Uracil phosphoribosyltr 54.3 23 0.00079 24.3 4.9 32 104-135 124-158 (209)
171 1vkr_A Mannitol-specific PTS s 54.2 11 0.00037 23.8 2.9 26 104-129 13-43 (125)
172 3llv_A Exopolyphosphatase-rela 54.1 19 0.00066 22.3 4.2 29 108-137 9-37 (141)
173 2j16_A SDP-1, tyrosine-protein 53.7 23 0.00077 23.8 4.7 28 102-129 115-145 (182)
174 1nkt_A Preprotein translocase 53.3 18 0.00061 30.9 4.7 38 102-140 458-495 (922)
175 1tvm_A PTS system, galactitol- 53.2 12 0.00042 23.0 3.0 27 104-130 21-52 (113)
176 3dez_A OPRT, oprtase, orotate 52.7 19 0.00064 25.5 4.2 49 101-149 146-204 (243)
177 1zn8_A APRT, adenine phosphori 52.7 19 0.00064 23.8 4.1 33 102-134 118-153 (180)
178 1z5z_A Helicase of the SNF2/RA 52.3 13 0.00045 26.5 3.4 38 102-140 110-148 (271)
179 2geb_A Hypoxanthine-guanine ph 51.5 19 0.00065 24.0 4.0 32 103-134 97-131 (185)
180 1qb0_A Protein (M-phase induce 51.0 4 0.00014 28.1 0.5 20 7-26 144-163 (211)
181 3jx9_A Putative phosphoheptose 50.9 28 0.00096 23.2 4.7 33 100-132 74-108 (170)
182 1dku_A Protein (phosphoribosyl 50.5 25 0.00084 25.9 4.7 34 103-136 216-252 (317)
183 1cbf_A Cobalt-precorrin-4 tran 50.4 66 0.0023 22.9 8.8 106 37-149 31-144 (285)
184 1hgx_A HGXPRTASE, hypoxanthine 49.8 21 0.00073 23.7 4.0 32 103-134 94-128 (183)
185 2pfu_A Biopolymer transport EX 49.3 37 0.0013 19.8 4.7 35 102-136 55-92 (99)
186 1y0b_A Xanthine phosphoribosyl 49.3 22 0.00075 23.9 4.1 48 102-149 118-175 (197)
187 1g2q_A Adenine phosphoribosylt 48.3 23 0.0008 23.6 4.1 32 102-133 120-154 (187)
188 1wd5_A Hypothetical protein TT 48.0 27 0.00091 23.7 4.4 33 103-135 119-154 (208)
189 1yks_A Genome polyprotein [con 48.0 21 0.00071 27.3 4.2 33 104-137 177-209 (440)
190 3op3_A M-phase inducer phospha 47.9 4.1 0.00014 28.4 0.2 18 9-26 159-176 (216)
191 1yfz_A Hypoxanthine-guanine ph 47.6 23 0.00079 24.0 4.0 32 103-134 117-151 (205)
192 2l17_A Synarsc, arsenate reduc 47.4 19 0.00064 22.8 3.3 35 106-140 6-41 (134)
193 3h1g_A Chemotaxis protein CHEY 47.2 38 0.0013 20.2 4.7 8 122-129 23-30 (129)
194 3rh0_A Arsenate reductase; oxi 46.9 14 0.00048 24.0 2.6 35 105-139 21-56 (148)
195 3e05_A Precorrin-6Y C5,15-meth 46.7 48 0.0016 21.8 5.5 42 91-133 122-163 (204)
196 1ufr_A TT1027, PYR mRNA-bindin 46.5 25 0.00085 23.2 3.9 32 103-134 95-130 (181)
197 3k5w_A Carbohydrate kinase; 11 46.5 28 0.00095 27.3 4.7 36 98-135 40-78 (475)
198 1ns5_A Hypothetical protein YB 46.5 26 0.00088 23.1 3.9 44 94-139 57-105 (155)
199 1ao0_A Glutamine phosphoribosy 45.9 31 0.0011 26.7 4.9 34 103-136 337-373 (459)
200 1tc1_A Protein (hypoxanthine p 45.8 26 0.00087 24.3 4.0 32 103-134 102-136 (220)
201 1l1q_A Adenine phosphoribosylt 45.5 32 0.0011 22.9 4.4 32 102-133 115-151 (186)
202 1pzm_A HGPRT, hypoxanthine-gua 45.2 27 0.00093 23.9 4.1 32 103-134 117-151 (211)
203 1k92_A Argininosuccinate synth 45.2 27 0.00094 27.2 4.4 30 101-130 7-36 (455)
204 2j48_A Two-component sensor ki 45.1 42 0.0014 19.1 4.9 7 123-129 40-46 (119)
205 1o5o_A Uracil phosphoribosyltr 44.6 38 0.0013 23.6 4.7 32 104-135 136-170 (221)
206 3rof_A Low molecular weight pr 44.3 14 0.00049 24.3 2.4 38 105-142 7-49 (158)
207 1a3c_A PYRR, pyrimidine operon 44.2 28 0.00094 22.9 3.9 32 103-134 97-132 (181)
208 1u9y_A RPPK;, ribose-phosphate 44.1 31 0.0011 24.9 4.4 32 103-134 204-238 (284)
209 3oiy_A Reverse gyrase helicase 43.8 33 0.0011 25.5 4.7 44 92-138 242-286 (414)
210 4gl2_A Interferon-induced heli 43.8 31 0.0011 27.7 4.8 34 104-138 400-439 (699)
211 3fpn_A Geobacillus stearotherm 43.1 59 0.002 20.3 5.1 43 92-134 7-53 (119)
212 1u2p_A Ptpase, low molecular w 43.0 15 0.0005 24.2 2.3 38 105-142 5-48 (163)
213 2cwd_A Low molecular weight ph 42.4 16 0.00055 24.0 2.4 40 104-143 4-49 (161)
214 2g1u_A Hypothetical protein TM 42.4 46 0.0016 21.0 4.7 32 104-137 19-50 (155)
215 3ipz_A Monothiol glutaredoxin- 42.0 46 0.0016 19.9 4.4 35 96-130 9-49 (109)
216 3mm4_A Histidine kinase homolo 41.9 50 0.0017 21.9 5.0 39 104-142 61-99 (206)
217 2aee_A OPRT, oprtase, orotate 41.8 33 0.0011 23.3 4.1 48 102-149 115-172 (211)
218 2b4a_A BH3024; flavodoxin-like 41.6 56 0.0019 19.6 4.9 38 104-142 15-52 (138)
219 3fmp_B ATP-dependent RNA helic 41.4 5.6 0.00019 30.6 0.0 36 104-140 333-368 (479)
220 1jbe_A Chemotaxis protein CHEY 41.3 53 0.0018 19.3 5.2 20 119-138 19-38 (128)
221 1lss_A TRK system potassium up 41.2 37 0.0013 20.6 4.0 24 111-135 10-33 (140)
222 1jl3_A Arsenate reductase; alp 41.2 30 0.001 21.9 3.5 34 106-139 5-39 (139)
223 1ecf_A Glutamine phosphoribosy 41.1 40 0.0014 26.4 4.9 33 103-135 358-393 (504)
224 2lpm_A Two-component response 41.0 39 0.0013 21.0 4.0 37 106-142 10-46 (123)
225 1d5r_A Phosphoinositide phosph 40.9 35 0.0012 25.0 4.3 82 43-128 43-137 (324)
226 4etn_A LMPTP, low molecular we 40.9 6.8 0.00023 26.6 0.4 39 104-143 34-77 (184)
227 2v6i_A RNA helicase; membrane, 40.7 30 0.001 26.3 4.0 35 104-139 171-205 (431)
228 3mb5_A SAM-dependent methyltra 40.3 24 0.00082 24.3 3.2 46 91-136 174-221 (255)
229 2ywu_A Hypoxanthine-guanine ph 40.0 39 0.0013 22.6 4.1 31 103-133 94-127 (181)
230 3q87_B N6 adenine specific DNA 39.8 50 0.0017 21.2 4.6 42 92-134 105-146 (170)
231 3fho_A ATP-dependent RNA helic 39.7 13 0.00044 29.0 1.8 37 103-140 356-392 (508)
232 2der_A TRNA-specific 2-thiouri 39.5 29 0.00098 26.3 3.7 28 103-130 16-43 (380)
233 3eod_A Protein HNR; response r 39.3 59 0.002 19.2 5.0 24 106-129 9-32 (130)
234 2b49_A Protein tyrosine phosph 39.3 43 0.0015 24.1 4.5 18 102-119 207-225 (287)
235 1xxa_A ARGR, arginine represso 39.1 27 0.00092 20.0 2.8 26 102-127 48-73 (78)
236 2c46_A MRNA capping enzyme; ph 38.7 74 0.0025 22.2 5.6 84 42-129 67-169 (241)
237 2hma_A Probable tRNA (5-methyl 38.5 35 0.0012 25.7 4.0 27 104-130 9-35 (376)
238 1b4b_A Arginine repressor; cor 38.5 25 0.00086 19.7 2.5 25 102-126 45-69 (71)
239 2z83_A Helicase/nucleoside tri 38.4 35 0.0012 26.2 4.1 33 104-137 190-222 (459)
240 1fuu_A Yeast initiation factor 38.3 6.6 0.00023 28.9 0.0 36 104-140 259-294 (394)
241 3hvu_A Hypoxanthine phosphorib 38.3 47 0.0016 22.7 4.4 31 103-133 115-148 (204)
242 2e55_A Uracil phosphoribosyltr 37.5 40 0.0014 23.2 3.9 31 104-134 121-154 (208)
243 2jbh_A Phosphoribosyltransfera 37.5 41 0.0014 23.2 4.0 31 103-133 133-166 (225)
244 3ohp_A Hypoxanthine phosphorib 37.4 43 0.0015 22.2 4.0 32 103-134 90-124 (177)
245 1jln_A STEP-like ptpase, prote 37.4 67 0.0023 23.2 5.3 17 102-118 220-237 (297)
246 2jlq_A Serine protease subunit 37.4 32 0.0011 26.3 3.8 36 104-140 188-223 (451)
247 1zc0_A Tyrosine-protein phosph 37.3 83 0.0028 22.9 5.8 16 103-118 232-248 (309)
248 1v9s_A Uracil phosphoribosyltr 37.2 41 0.0014 23.1 3.9 32 104-135 123-157 (208)
249 3m4u_A Tyrosine specific prote 37.1 58 0.002 23.6 5.0 31 88-118 203-237 (306)
250 3h5i_A Response regulator/sens 37.1 66 0.0023 19.4 4.7 23 107-129 8-30 (140)
251 3s5j_B Ribose-phosphate pyroph 37.0 45 0.0015 24.7 4.3 33 103-135 212-247 (326)
252 1fsg_A HGPRTASE, hypoxanthine- 36.9 43 0.0015 23.3 4.1 31 103-133 141-174 (233)
253 1p8a_A Protein tyrosine phosph 36.9 4.8 0.00017 26.0 -0.9 38 105-142 5-43 (146)
254 3dah_A Ribose-phosphate pyroph 36.8 50 0.0017 24.4 4.6 33 103-135 215-250 (319)
255 2e0n_A Precorrin-2 C20-methylt 36.8 75 0.0026 22.2 5.4 112 37-149 15-147 (259)
256 2yvq_A Carbamoyl-phosphate syn 36.6 69 0.0024 20.4 4.8 32 117-150 39-71 (143)
257 4grz_A Tyrosine-protein phosph 36.6 51 0.0017 23.6 4.5 18 101-118 203-221 (288)
258 1qb7_A APRT, adenine phosphori 36.6 44 0.0015 23.3 4.1 32 102-133 136-170 (236)
259 2zfz_A Arginine repressor; DNA 36.6 29 0.00099 19.9 2.6 25 102-126 53-77 (79)
260 2eyq_A TRCF, transcription-rep 36.5 47 0.0016 29.0 4.9 46 94-140 802-849 (1151)
261 2wmy_A WZB, putative acid phos 36.5 28 0.00096 22.5 2.8 35 105-140 9-44 (150)
262 3c85_A Putative glutathione-re 36.3 39 0.0013 21.9 3.7 29 108-137 42-71 (183)
263 3o7m_A Hypoxanthine phosphorib 36.3 46 0.0016 22.3 4.0 31 103-133 93-126 (186)
264 3lte_A Response regulator; str 36.2 67 0.0023 18.9 4.7 11 119-129 21-31 (132)
265 3mwy_W Chromo domain-containin 36.2 43 0.0015 27.8 4.5 38 102-140 570-607 (800)
266 3grc_A Sensor protein, kinase; 36.2 70 0.0024 19.1 5.0 23 107-129 9-31 (140)
267 1z3i_X Similar to RAD54-like; 35.9 32 0.0011 27.8 3.6 36 103-139 415-450 (644)
268 1w30_A PYRR bifunctional prote 35.8 45 0.0015 22.6 3.9 31 103-133 111-145 (201)
269 1o54_A SAM-dependent O-methylt 35.8 21 0.00071 25.1 2.3 46 92-137 194-239 (277)
270 1yzh_A TRNA (guanine-N(7)-)-me 35.7 75 0.0026 21.1 5.1 44 91-134 136-179 (214)
271 1fpr_A Protein-tyrosine phosph 35.4 49 0.0017 23.7 4.3 17 102-118 202-219 (284)
272 1z63_A Helicase of the SNF2/RA 35.3 40 0.0014 25.8 4.0 39 101-140 338-377 (500)
273 2whx_A Serine protease/ntpase/ 34.9 40 0.0014 27.2 4.0 34 104-138 355-388 (618)
274 2ps1_A Orotate phosphoribosylt 34.9 49 0.0017 22.8 4.1 31 103-133 124-157 (226)
275 3mmj_A MYO-inositol hexaphosph 34.8 1E+02 0.0034 22.8 5.9 32 87-118 193-228 (314)
276 2wv9_A Flavivirin protease NS2 34.8 35 0.0012 27.9 3.7 35 103-138 409-443 (673)
277 1pdo_A Mannose permease; phosp 34.8 84 0.0029 19.6 5.9 43 93-137 47-91 (135)
278 8abp_A L-arabinose-binding pro 34.7 91 0.0031 21.6 5.6 29 107-135 199-229 (306)
279 3e8x_A Putative NAD-dependent 34.6 57 0.002 22.0 4.4 32 104-136 21-52 (236)
280 1wch_A Protein tyrosine phosph 34.4 94 0.0032 22.7 5.7 17 102-118 237-254 (315)
281 2ehj_A Uracil phosphoribosyltr 34.3 45 0.0015 22.9 3.7 32 104-135 123-157 (208)
282 1jf8_A Arsenate reductase; ptp 34.1 54 0.0018 20.5 3.9 36 105-140 4-40 (131)
283 2hmt_A YUAA protein; RCK, KTN, 33.9 57 0.002 19.7 4.0 30 106-137 8-37 (144)
284 2wja_A Putative acid phosphata 33.9 32 0.0011 22.8 2.8 36 105-141 27-63 (168)
285 3b7o_A Tyrosine-protein phosph 33.8 88 0.003 22.8 5.5 17 102-118 237-254 (316)
286 2p5m_A Arginine repressor; alp 33.8 30 0.001 20.0 2.4 25 102-126 57-81 (83)
287 2pln_A HP1043, response regula 33.7 77 0.0026 18.9 4.9 36 104-140 18-53 (137)
288 3i36_A Vascular protein tyrosi 33.6 56 0.0019 24.2 4.4 17 102-118 235-252 (342)
289 3dfz_A SIRC, precorrin-2 dehyd 33.3 44 0.0015 23.2 3.6 50 66-136 12-61 (223)
290 3hdv_A Response regulator; PSI 33.3 77 0.0026 18.8 5.0 34 106-140 9-42 (136)
291 3cg4_A Response regulator rece 32.9 80 0.0027 18.8 5.0 32 106-138 9-40 (142)
292 3lrt_A Ribose-phosphate pyroph 32.5 62 0.0021 23.4 4.4 32 103-134 202-236 (286)
293 3t6k_A Response regulator rece 32.5 82 0.0028 18.9 5.0 6 124-129 44-49 (136)
294 2xij_A Methylmalonyl-COA mutas 32.3 1.3E+02 0.0044 25.2 6.6 36 103-138 654-693 (762)
295 3gt7_A Sensor protein; structu 32.1 79 0.0027 19.4 4.5 23 107-129 10-32 (154)
296 1z7g_A HGPRT, HGPRTASE, hypoxa 32.1 45 0.0015 22.9 3.5 31 103-133 125-158 (217)
297 1l8k_A T-cell protein-tyrosine 31.9 94 0.0032 22.6 5.4 16 103-118 208-224 (314)
298 2ji4_A Phosphoribosyl pyrophos 31.8 59 0.002 24.6 4.3 32 103-134 271-305 (379)
299 3gx1_A LIN1832 protein; APC633 31.6 96 0.0033 19.4 5.2 44 93-137 50-93 (130)
300 2fek_A Low molecular weight pr 31.6 38 0.0013 22.4 2.9 35 105-140 23-58 (167)
301 3ipr_A PTS system, IIA compone 31.6 97 0.0033 19.9 4.9 45 93-137 47-96 (150)
302 3k32_A Uncharacterized protein 31.5 47 0.0016 22.4 3.5 24 106-129 8-31 (203)
303 2i1y_A Receptor-type tyrosine- 31.4 97 0.0033 22.4 5.3 16 103-118 223-239 (301)
304 4az1_A Tyrosine specific prote 31.4 77 0.0026 22.8 4.8 31 88-118 200-234 (302)
305 3ghd_A A cystathionine beta-sy 31.4 67 0.0023 17.5 3.8 28 111-138 5-32 (70)
306 1jdq_A TM006 protein, hypothet 31.3 85 0.0029 18.7 5.7 38 93-130 42-79 (98)
307 3jvi_A Protein tyrosine phosph 31.1 16 0.00055 24.0 1.0 38 105-142 5-48 (161)
308 2bzl_A Tyrosine-protein phosph 31.1 1.2E+02 0.0041 22.2 5.8 16 103-118 251-267 (325)
309 3f6p_A Transcriptional regulat 30.8 82 0.0028 18.3 4.9 14 122-136 40-53 (120)
310 1d1q_A Tyrosine phosphatase (E 30.7 15 0.00052 24.0 0.8 38 105-142 8-52 (161)
311 1wy5_A TILS, hypothetical UPF0 30.6 88 0.003 22.6 5.0 39 101-139 21-65 (317)
312 2pwy_A TRNA (adenine-N(1)-)-me 30.6 21 0.00071 24.5 1.6 45 92-136 179-223 (258)
313 1y80_A Predicted cobalamin bin 30.4 89 0.0031 21.0 4.8 32 104-136 88-123 (210)
314 3vyw_A MNMC2; tRNA wobble urid 30.4 28 0.00096 25.7 2.2 42 91-137 206-247 (308)
315 2ykg_A Probable ATP-dependent 30.3 71 0.0024 25.6 4.8 34 103-137 397-434 (696)
316 3dmq_A RNA polymerase-associat 30.3 54 0.0018 28.0 4.2 38 102-140 501-539 (968)
317 3zyw_A Glutaredoxin-3; metal b 30.2 60 0.0021 19.5 3.5 28 103-130 14-47 (111)
318 2rjn_A Response regulator rece 30.2 90 0.0031 19.0 4.5 23 107-129 10-32 (154)
319 1mvo_A PHOP response regulator 30.1 88 0.003 18.5 4.8 11 124-135 43-53 (136)
320 3rjz_A N-type ATP pyrophosphat 29.9 68 0.0023 22.6 4.1 27 105-131 5-31 (237)
321 2qbu_A Precorrin-2 methyltrans 29.7 1.3E+02 0.0043 20.4 5.5 112 37-149 13-145 (232)
322 2qxy_A Response regulator; reg 29.7 83 0.0029 18.8 4.3 10 120-129 20-29 (142)
323 1req_A Methylmalonyl-COA mutas 29.6 1.8E+02 0.006 24.3 7.0 35 104-138 647-685 (727)
324 3i42_A Response regulator rece 29.6 79 0.0027 18.5 4.0 14 121-135 40-53 (127)
325 3n8i_A Low molecular weight ph 29.4 15 0.0005 24.1 0.5 39 104-142 5-49 (157)
326 4ao9_A Beta-phenylalanine amin 29.2 81 0.0028 24.4 4.8 50 93-143 131-183 (454)
327 2dpl_A GMP synthetase, GMP syn 29.2 85 0.0029 22.8 4.7 33 97-130 14-47 (308)
328 2obn_A Hypothetical protein; s 29.1 1.8E+02 0.0062 21.7 7.6 28 116-144 169-196 (349)
329 3dmp_A Uracil phosphoribosyltr 28.9 86 0.0029 21.7 4.4 32 104-135 129-165 (217)
330 2bcg_G Secretory pathway GDP d 28.9 67 0.0023 24.4 4.3 30 105-136 12-41 (453)
331 2ivy_A Hypothetical protein SS 28.8 61 0.0021 19.4 3.3 27 107-133 6-33 (101)
332 2gqw_A Ferredoxin reductase; f 28.8 1.8E+02 0.0061 21.6 6.7 45 90-136 131-175 (408)
333 3lvj_C Sulfurtransferase TUSA; 28.6 85 0.0029 17.8 5.5 38 93-130 26-63 (82)
334 1sby_A Alcohol dehydrogenase; 28.6 90 0.0031 21.3 4.7 30 105-134 6-35 (254)
335 2i2x_B MTAC, methyltransferase 28.5 1E+02 0.0035 21.6 4.9 31 104-135 123-157 (258)
336 4atq_A 4-aminobutyrate transam 28.4 50 0.0017 25.5 3.5 44 99-142 118-164 (456)
337 2hc1_A Receptor-type tyrosine- 28.3 84 0.0029 22.6 4.5 17 102-118 216-233 (291)
338 2cm2_A Tyrosine-protein phosph 28.3 98 0.0034 22.3 4.9 16 103-118 213-229 (304)
339 3gh1_A Predicted nucleotide-bi 28.3 1E+02 0.0036 24.0 5.1 28 103-130 145-179 (462)
340 1p15_A Protein-tyrosine phosph 28.1 80 0.0027 22.1 4.3 17 102-118 174-191 (253)
341 2zay_A Response regulator rece 27.7 81 0.0028 19.0 3.9 11 119-129 23-33 (147)
342 2qr3_A Two-component system re 27.6 90 0.0031 18.5 4.1 15 121-136 40-54 (140)
343 1mb3_A Cell division response 27.6 93 0.0032 17.9 4.8 14 122-136 39-52 (124)
344 2ooq_A Receptor-type tyrosine- 27.4 93 0.0032 22.2 4.6 16 103-118 211-227 (286)
345 3mtq_A Putative phosphoenolpyr 27.3 1.3E+02 0.0044 19.7 4.9 43 92-137 65-109 (159)
346 3hv2_A Response regulator/HD d 27.2 94 0.0032 19.0 4.2 9 121-129 31-39 (153)
347 3r4v_A Putative uncharacterize 27.1 1.3E+02 0.0044 22.2 5.1 43 95-137 72-119 (315)
348 3l49_A ABC sugar (ribose) tran 27.1 1.1E+02 0.0037 21.1 4.9 31 105-135 191-221 (291)
349 3dje_A Fructosyl amine: oxygen 27.0 77 0.0026 23.6 4.3 31 105-136 7-37 (438)
350 2jae_A L-amino acid oxidase; o 27.0 1E+02 0.0034 23.4 5.0 34 101-136 8-41 (489)
351 4dfc_B Uvrabc system protein A 26.9 75 0.0026 19.9 3.6 43 92-134 9-55 (126)
352 2oc3_A Tyrosine-protein phosph 26.8 1E+02 0.0034 22.3 4.7 16 103-118 225-241 (303)
353 1ni5_A Putative cell cycle pro 26.8 1.2E+02 0.004 23.2 5.3 26 101-126 10-35 (433)
354 3hz7_A Uncharacterized protein 26.7 91 0.0031 18.0 3.7 37 94-130 18-55 (87)
355 1yfo_A D1, receptor protein ty 26.7 99 0.0034 22.3 4.7 16 103-118 224-240 (302)
356 3heb_A Response regulator rece 26.7 1.1E+02 0.0038 18.5 4.9 24 106-129 6-29 (152)
357 2pk3_A GDP-6-deoxy-D-LYXO-4-he 26.6 83 0.0029 22.1 4.3 33 102-135 10-42 (321)
358 1l3i_A Precorrin-6Y methyltran 26.5 65 0.0022 20.5 3.4 42 91-133 114-155 (192)
359 3i4t_A Diphthine synthase; nia 26.3 51 0.0018 23.9 3.0 104 37-150 31-146 (292)
360 1u7z_A Coenzyme A biosynthesis 26.3 1.2E+02 0.0041 21.1 4.8 24 113-137 33-56 (226)
361 2i75_A Tyrosine-protein phosph 26.3 77 0.0026 23.2 4.0 16 103-118 236-252 (320)
362 1zud_1 Adenylyltransferase THI 26.2 89 0.003 21.8 4.2 34 104-138 28-61 (251)
363 2c5s_A THII, probable thiamine 26.1 65 0.0022 24.5 3.7 27 104-130 187-213 (413)
364 4ge6_A Tyrosine-protein phosph 26.0 1.4E+02 0.0048 21.6 5.4 16 103-118 232-248 (314)
365 1bd3_D Uprtase, uracil phospho 25.7 71 0.0024 22.6 3.6 32 104-135 156-192 (243)
366 1f08_A Replication protein E1; 25.6 46 0.0016 21.7 2.4 57 89-145 86-143 (148)
367 4e3q_A Pyruvate transaminase; 25.6 1.2E+02 0.0042 23.5 5.2 45 97-141 120-172 (473)
368 1cyd_A Carbonyl reductase; sho 25.4 1.1E+02 0.0038 20.5 4.6 32 104-136 7-38 (244)
369 4id9_A Short-chain dehydrogena 25.4 84 0.0029 22.5 4.1 33 103-136 18-50 (347)
370 2cjz_A Human protein tyrosine 25.3 1.3E+02 0.0045 21.8 5.1 17 102-118 229-246 (305)
371 3fbt_A Chorismate mutase and s 25.3 1.9E+02 0.0064 20.7 5.9 34 103-137 121-154 (282)
372 3exc_X Uncharacterized protein 25.3 77 0.0026 18.6 3.2 26 107-132 7-33 (91)
373 3g85_A Transcriptional regulat 25.2 1.7E+02 0.0057 20.0 7.0 37 101-137 88-135 (289)
374 1yb2_A Hypothetical protein TA 25.2 13 0.00043 26.3 -0.4 46 91-136 191-236 (275)
375 4hjh_A Phosphomannomutase; str 25.2 1.2E+02 0.0042 23.5 5.2 42 93-135 163-208 (481)
376 1pav_A Hypothetical protein TA 25.1 66 0.0023 17.9 2.8 38 93-130 22-59 (78)
377 3ju3_A Probable 2-oxoacid ferr 25.0 97 0.0033 18.9 3.8 15 115-129 26-40 (118)
378 1je3_A EC005, hypothetical 8.6 24.9 87 0.003 18.6 3.4 38 93-130 43-80 (97)
379 3t38_A Arsenate reductase; low 24.7 65 0.0022 22.2 3.2 37 103-139 80-117 (213)
380 3s3e_A Tyrosine-protein phosph 24.6 1.6E+02 0.0055 21.3 5.5 17 102-118 233-250 (307)
381 2l69_A Rossmann 2X3 fold prote 24.6 1.2E+02 0.0041 18.2 5.0 84 47-135 18-107 (134)
382 3fio_A A cystathionine beta-sy 24.5 83 0.0028 16.3 3.8 17 119-135 13-29 (70)
383 3jyo_A Quinate/shikimate dehyd 24.5 1.2E+02 0.0042 21.6 4.8 35 103-138 126-160 (283)
384 4dad_A Putative pilus assembly 24.5 95 0.0033 18.7 3.8 36 105-141 21-57 (146)
385 3mjd_A Orotate phosphoribosylt 24.5 98 0.0034 21.6 4.1 29 103-131 135-166 (232)
386 1y8q_A Ubiquitin-like 1 activa 24.5 82 0.0028 23.3 3.9 34 104-138 36-69 (346)
387 3ozf_A Hypoxanthine-guanine-xa 24.4 82 0.0028 22.4 3.7 31 103-133 155-188 (250)
388 2r25_B Osmosensing histidine p 24.4 1.2E+02 0.004 18.0 5.1 11 108-118 30-40 (133)
389 3qw4_B UMP synthase; N-termina 24.2 1.1E+02 0.0037 23.7 4.7 50 101-150 362-420 (453)
390 1byk_A Protein (trehalose oper 24.2 1.4E+02 0.0049 20.0 5.0 31 105-135 172-202 (255)
391 2ayx_A Sensor kinase protein R 24.1 1.3E+02 0.0044 20.6 4.8 38 105-143 130-167 (254)
392 1y1l_A Arsenate reductase (ARS 23.9 78 0.0027 19.5 3.2 21 107-127 2-23 (124)
393 3awd_A GOX2181, putative polyo 23.8 1.2E+02 0.004 20.6 4.5 30 105-135 14-43 (260)
394 2fca_A TRNA (guanine-N(7)-)-me 23.5 1.4E+02 0.0047 19.9 4.7 43 91-133 133-175 (213)
395 3rqi_A Response regulator prot 23.5 1.5E+02 0.0051 18.9 4.9 34 107-141 10-43 (184)
396 1xhf_A DYE resistance, aerobic 23.4 1.1E+02 0.0039 17.5 4.6 13 122-135 41-53 (123)
397 2rdm_A Response regulator rece 23.4 1.2E+02 0.004 17.7 4.9 10 120-129 21-30 (132)
398 1dcf_A ETR1 protein; beta-alph 23.4 1.2E+02 0.0042 17.8 4.9 34 106-140 9-42 (136)
399 3lfh_A Manxa, phosphotransfera 23.4 87 0.003 20.0 3.4 43 93-137 49-93 (144)
400 2shp_A SHP-2, SYP, SHPTP-2; ty 23.3 1.8E+02 0.006 22.8 5.8 17 102-118 450-467 (525)
401 3vps_A TUNA, NAD-dependent epi 23.3 1.3E+02 0.0043 21.1 4.7 32 104-136 7-38 (321)
402 1g8m_A Aicar transformylase-IM 23.2 1.5E+02 0.0053 23.9 5.3 44 106-150 7-50 (593)
403 1lh0_A OMP synthase; loop clos 23.2 1.1E+02 0.0037 20.8 4.1 30 103-133 117-149 (213)
404 3t4e_A Quinate/shikimate dehyd 23.2 1.5E+02 0.005 21.7 5.0 35 103-138 147-181 (312)
405 2wsb_A Galactitol dehydrogenas 23.1 1.2E+02 0.0043 20.4 4.5 32 104-136 11-42 (254)
406 2yxb_A Coenzyme B12-dependent 23.1 1.6E+02 0.0054 19.0 6.3 15 47-61 38-53 (161)
407 3rui_A Ubiquitin-like modifier 23.0 1.1E+02 0.0038 22.7 4.4 35 104-139 34-68 (340)
408 2pl1_A Transcriptional regulat 22.9 1.2E+02 0.0039 17.4 4.5 15 121-136 37-51 (121)
409 3a10_A Response regulator; pho 22.9 1.1E+02 0.0039 17.3 4.6 14 122-136 39-52 (116)
410 2qzj_A Two-component response 22.9 1.3E+02 0.0044 17.9 4.5 14 122-136 42-55 (136)
411 3gx8_A Monothiol glutaredoxin- 22.8 77 0.0026 19.4 3.0 27 104-130 15-47 (121)
412 1jw9_B Molybdopterin biosynthe 22.7 97 0.0033 21.6 3.9 35 104-139 31-65 (249)
413 1vl2_A Argininosuccinate synth 22.6 1.1E+02 0.0038 23.5 4.4 26 105-130 15-40 (421)
414 3hcw_A Maltose operon transcri 22.6 1.7E+02 0.0058 20.2 5.2 32 104-135 191-225 (295)
415 3d3w_A L-xylulose reductase; u 22.5 1.4E+02 0.0047 20.1 4.6 32 104-136 7-38 (244)
416 2b3o_A Tyrosine-protein phosph 22.4 1.5E+02 0.0051 23.2 5.3 17 102-118 444-461 (532)
417 2p6x_A Tyrosine-protein phosph 22.3 1.4E+02 0.0047 21.7 4.7 16 103-118 219-235 (309)
418 3ruf_A WBGU; rossmann fold, UD 22.3 1.2E+02 0.0042 21.6 4.5 33 103-136 24-56 (351)
419 2wci_A Glutaredoxin-4; redox-a 22.3 55 0.0019 20.7 2.3 27 104-130 34-66 (135)
420 1zat_A L,D-transpeptidase; L,D 22.3 67 0.0023 22.4 3.0 19 92-110 232-250 (250)
421 3n0r_A Response regulator; sig 22.3 1.5E+02 0.0051 21.0 4.9 40 104-144 160-200 (286)
422 3ezx_A MMCP 1, monomethylamine 22.2 1.5E+02 0.0053 20.1 4.8 31 104-135 92-126 (215)
423 3kto_A Response regulator rece 22.1 80 0.0027 18.8 3.0 35 106-141 8-42 (136)
424 1tmy_A CHEY protein, TMY; chem 22.1 1.2E+02 0.0041 17.3 4.7 27 106-136 28-54 (120)
425 3l6u_A ABC-type sugar transpor 21.9 83 0.0029 21.7 3.4 31 105-135 195-225 (293)
426 3hzh_A Chemotaxis response reg 21.8 1.5E+02 0.005 18.2 4.4 25 106-130 38-62 (157)
427 2ywb_A GMP synthase [glutamine 21.7 1.7E+02 0.0057 22.9 5.4 35 104-139 209-245 (503)
428 1vbk_A Hypothetical protein PH 21.7 1.4E+02 0.0048 21.6 4.7 25 105-130 180-204 (307)
429 1srr_A SPO0F, sporulation resp 21.5 1.3E+02 0.0044 17.4 4.5 14 122-136 41-54 (124)
430 3gbv_A Putative LACI-family tr 21.4 90 0.0031 21.6 3.5 29 106-135 201-229 (304)
431 3rp8_A Flavoprotein monooxygen 21.4 1E+02 0.0035 22.7 4.0 30 106-137 25-54 (407)
432 3tum_A Shikimate dehydrogenase 21.3 2.2E+02 0.0077 20.1 6.2 34 103-137 124-157 (269)
433 3pwz_A Shikimate dehydrogenase 21.3 1.8E+02 0.006 20.7 5.1 33 104-137 120-152 (272)
434 2dri_A D-ribose-binding protei 21.3 75 0.0026 21.8 3.1 30 106-135 183-212 (271)
435 1rpn_A GDP-mannose 4,6-dehydra 21.3 1.2E+02 0.0041 21.4 4.3 32 103-135 13-44 (335)
436 1y1p_A ARII, aldehyde reductas 21.2 1.5E+02 0.0051 20.9 4.8 32 103-135 10-41 (342)
437 3u62_A Shikimate dehydrogenase 21.2 1.3E+02 0.0044 21.1 4.3 31 106-137 110-140 (253)
438 3gdw_A Sigma-54 interaction do 21.2 1.7E+02 0.0057 18.5 4.6 43 94-137 51-95 (139)
439 1ccw_A Protein (glutamate muta 21.2 1.6E+02 0.0054 18.3 5.0 19 120-138 74-92 (137)
440 3kht_A Response regulator; PSI 21.1 1.4E+02 0.0049 17.8 4.5 11 119-129 20-30 (144)
441 1ryi_A Glycine oxidase; flavop 21.0 1.3E+02 0.0044 21.7 4.4 30 106-137 19-48 (382)
442 1o5i_A 3-oxoacyl-(acyl carrier 21.0 1.5E+02 0.0052 20.2 4.6 33 103-136 18-50 (249)
443 1ygr_A CD45 protein tyrosine p 21.0 2E+02 0.0067 23.0 5.8 16 103-118 222-238 (610)
444 3cfy_A Putative LUXO repressor 20.9 1.2E+02 0.004 18.1 3.7 25 108-136 31-55 (137)
445 1k66_A Phytochrome response re 20.9 1.4E+02 0.0049 17.7 4.9 13 117-129 19-31 (149)
446 1xg5_A ARPG836; short chain de 20.8 1.5E+02 0.0051 20.5 4.6 30 105-135 33-62 (279)
447 1npy_A Hypothetical shikimate 20.8 1.3E+02 0.0043 21.4 4.2 34 103-137 118-151 (271)
448 2ojl_A Hypothetical protein; B 20.8 71 0.0024 19.6 2.4 21 105-125 10-33 (108)
449 4ddu_A Reverse gyrase; topoiso 20.8 1E+02 0.0036 26.8 4.3 42 93-137 300-342 (1104)
450 1o57_A PUR operon repressor; p 20.7 80 0.0027 22.8 3.1 33 101-133 193-228 (291)
451 2fn9_A Ribose ABC transporter, 20.7 91 0.0031 21.5 3.4 30 106-135 192-221 (290)
452 3ef6_A Toluene 1,2-dioxygenase 20.6 2.6E+02 0.009 20.6 6.8 45 90-136 129-173 (410)
453 4em8_A Ribose 5-phosphate isom 20.4 1.9E+02 0.0063 18.8 5.5 54 50-122 29-82 (148)
454 4gxt_A A conserved functionall 20.4 66 0.0023 24.2 2.7 26 117-143 226-251 (385)
455 3lap_A Arginine repressor; arg 20.3 77 0.0026 21.1 2.7 25 102-126 144-168 (170)
456 3sho_A Transcriptional regulat 20.2 1.8E+02 0.0062 18.6 6.0 42 94-136 78-121 (187)
457 3tnl_A Shikimate dehydrogenase 20.2 2.6E+02 0.0088 20.4 6.1 34 103-137 153-186 (315)
458 3o8q_A Shikimate 5-dehydrogena 20.2 1.6E+02 0.0056 21.0 4.7 34 103-137 125-158 (281)
459 3qja_A IGPS, indole-3-glycerol 20.2 1.6E+02 0.0054 21.0 4.6 40 92-133 201-240 (272)
460 1kdg_A CDH, cellobiose dehydro 20.1 1.3E+02 0.0044 23.5 4.4 30 108-138 10-39 (546)
461 2jba_A Phosphate regulon trans 20.1 1.4E+02 0.0047 17.2 4.5 23 107-129 5-27 (127)
462 1sur_A PAPS reductase; assimil 20.1 2E+02 0.0069 19.1 5.2 8 107-114 72-79 (215)
463 3crn_A Response regulator rece 20.1 1.5E+02 0.005 17.5 4.9 14 122-136 41-54 (132)
464 2aef_A Calcium-gated potassium 20.0 47 0.0016 22.6 1.7 20 110-129 14-33 (234)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.97 E-value=6.6e-32 Score=172.56 Aligned_cols=99 Identities=25% Similarity=0.409 Sum_probs=87.6
Q ss_pred cccCHHHHHHHHhCC--CEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhH
Q 031899 40 TSVPVRVAHELLQAG--HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 117 (151)
Q Consensus 40 ~~i~~~~~~~~~~~~--~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a 117 (151)
+.|+++++++++.++ ++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.||
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivv~C~~G~rS 69 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRS 69 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHH
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCccc------------chhhhhhhhcCCCeEEEECCCCHHH
Confidence 468999999877543 89999999999999999999999994 3445556788999999999999999
Q ss_pred HHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 118 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 118 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
..++..|++.||+++ .|.||+.+|.++|+||++
T Consensus 70 ~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 70 AKVVEYLEANGIDAV-NVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHTTTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHcCCCEE-EecChHHHHHHCCCccee
Confidence 999999999999655 689999999999999985
No 2
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.97 E-value=1.5e-31 Score=177.45 Aligned_cols=115 Identities=68% Similarity=1.123 Sum_probs=102.2
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChh
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 116 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~ 116 (151)
.....|+++++.++++++++|||||++.||..||||||+|+|+..+...+.+.+.++++.....++++++||+||.+|.|
T Consensus 15 ~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G~r 94 (129)
T 1tq1_A 15 RVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGGR 94 (129)
T ss_dssp CCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCSH
T ss_pred CCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCCcH
Confidence 44568999999998887789999999999999999999999997665556666667777777778899999999999999
Q ss_pred HHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 117 SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 117 a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
|..++..|++.||+||++|+||+.+|..+|+|+++
T Consensus 95 s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (129)
T 1tq1_A 95 SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 129 (129)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred HHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999974
No 3
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.97 E-value=9.6e-31 Score=166.36 Aligned_cols=97 Identities=24% Similarity=0.389 Sum_probs=87.1
Q ss_pred cccCHHHHHHHHh--CCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhH
Q 031899 40 TSVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 117 (151)
Q Consensus 40 ~~i~~~~~~~~~~--~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a 117 (151)
+.|+++++.++++ ++++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.||
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivvyC~~g~rs 69 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMN------------SIPDNLNYFNDNETYYIICKAGGRS 69 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGSCTTSEEEEECSSSHHH
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHH------------HHHHHHHhCCCCCcEEEEcCCCchH
Confidence 4589999999884 3599999999999999999999999994 3444556678899999999999999
Q ss_pred HHHHHHHHHCCCCceeEccccHHHHHhCCCCC
Q 031899 118 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 118 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv 149 (151)
..+++.|++.|| +|++|+||+.+|.++|+||
T Consensus 70 ~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 70 AQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred HHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 999999999999 9999999999999999996
No 4
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.97 E-value=1e-30 Score=167.03 Aligned_cols=99 Identities=25% Similarity=0.387 Sum_probs=88.4
Q ss_pred cccCHHHHHHHHh--CCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhH
Q 031899 40 TSVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 117 (151)
Q Consensus 40 ~~i~~~~~~~~~~--~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a 117 (151)
+.|+++++.+++. ++++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.||
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~yC~~g~rs 69 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRS 69 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHH
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhCCCCCeEEEECCCChHH
Confidence 4589999999874 3589999999999999999999999994 3444455678899999999999999
Q ss_pred HHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 118 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 118 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
..+++.|+..|| +|++|+||+.+|.++|+|+++
T Consensus 70 ~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 70 AKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 999999999999 999999999999999999974
No 5
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.97 E-value=3.9e-30 Score=165.74 Aligned_cols=99 Identities=29% Similarity=0.433 Sum_probs=91.4
Q ss_pred ccccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHH
Q 031899 39 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 118 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~ 118 (151)
...|+++++.+++++ ++|||||++.||..||||||+|+|+ ..+......++++++||+||.+|.||.
T Consensus 3 ~~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyC~~G~rs~ 69 (108)
T 3gk5_A 3 YRSINAADLYENIKA-YTVLDVREPFELIFGSIANSINIPI------------SELREKWKILERDKKYAVICAHGNRSA 69 (108)
T ss_dssp CCEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTCEECCH------------HHHHHHGGGSCTTSCEEEECSSSHHHH
T ss_pred ccEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCCEEcCH------------HHHHHHHHhCCCCCeEEEEcCCCcHHH
Confidence 356899999998877 9999999999999999999999999 566777778899999999999999999
Q ss_pred HHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 119 MAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 119 ~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
.+++.|++.|| +|++|+||+.+|.++|+|+++
T Consensus 70 ~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 70 AAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp HHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 99999999999 999999999999999999864
No 6
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.96 E-value=1.4e-29 Score=187.58 Aligned_cols=146 Identities=21% Similarity=0.339 Sum_probs=111.0
Q ss_pred cccccCccccccccccccccCccccCc--cc--------ccCCccccCHHHHHHHHh-CCCEEEecCChhhH--------
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLRGN--LE--------AVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF-------- 66 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~~~--~~--------~~~~~~~i~~~~~~~~~~-~~~~iiDvR~~~e~-------- 66 (151)
...+|++|++|+||+.+|......... .. .......++++++.++++ .+++|||||++.||
T Consensus 108 ~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~ 187 (280)
T 1urh_A 108 RTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPR 187 (280)
T ss_dssp HHTTCSCEEEETTHHHHHHHTTCCCBBSCCCCCCCCCCCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC--
T ss_pred HHcCCCCEEEecCCHHHHHHCCCcccCCCCCCCCCccccccCcccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCC
Confidence 457899999999999999875432111 10 001223589999988876 45899999999999
Q ss_pred ---hcCCCCCceeeccccccCCCCCCCHHHHHHHHh--ccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHH
Q 031899 67 ---SAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAA 141 (151)
Q Consensus 67 ---~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~--~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~ 141 (151)
..||||||+|+|+..+...+.+.+.+.+...+. .++++++||+||++|.||..++..|+.+||+||++|+||+.+
T Consensus 188 ~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~ 267 (280)
T 1urh_A 188 PGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSE 267 (280)
T ss_dssp --CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC
T ss_pred CCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHH
Confidence 689999999999987776666777777777666 367899999999999999999999999999999999999999
Q ss_pred HHh-CCCCCCC
Q 031899 142 WRQ-NGLPTEP 151 (151)
Q Consensus 142 W~~-~g~pv~~ 151 (151)
|.. .++|+++
T Consensus 268 W~~~~~~Pv~~ 278 (280)
T 1urh_A 268 WGARADLPVEP 278 (280)
T ss_dssp -----------
T ss_pred HhcCCCCCcee
Confidence 988 5999874
No 7
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.96 E-value=1.7e-29 Score=162.63 Aligned_cols=99 Identities=30% Similarity=0.500 Sum_probs=89.4
Q ss_pred ccccCHHHHHHHHhC-CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhH
Q 031899 39 PTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 117 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~-~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a 117 (151)
...++++++.+++++ +++|||||++.||..||||||+|+|+ ..+......++++++||+||.+|.||
T Consensus 4 ~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyc~~g~rs 71 (108)
T 1gmx_A 4 FECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTN------------DTLGAFMRDNDFDTPVMVMCYHGNSS 71 (108)
T ss_dssp CEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCH------------HHHHHHHHHSCTTSCEEEECSSSSHH
T ss_pred ccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCH------------HHHHHHHHhcCCCCCEEEEcCCCchH
Confidence 356899999988875 48999999999999999999999999 45555666688999999999999999
Q ss_pred HHHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 118 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 118 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
..+++.|++.||++|++|+||+.+|.++ +|++
T Consensus 72 ~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~ 103 (108)
T 1gmx_A 72 KGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAE 103 (108)
T ss_dssp HHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGG
T ss_pred HHHHHHHHHcCCceEEEecCCHHHHHHh-CCcc
Confidence 9999999999999999999999999998 8875
No 8
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.96 E-value=3.3e-29 Score=184.68 Aligned_cols=146 Identities=16% Similarity=0.262 Sum_probs=114.9
Q ss_pred cccccCccccccccccccccCccccCc--cc--------ccCCccccCHHHHHHHHhCC-CEEEecCChhhHh-------
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLRGN--LE--------AVGVPTSVPVRVAHELLQAG-HRYLDVRTPEEFS------- 67 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~~~--~~--------~~~~~~~i~~~~~~~~~~~~-~~iiDvR~~~e~~------- 67 (151)
...+|++|.+|+||+.+|......... .. .......++++++.++++++ ++|||||++.||.
T Consensus 103 ~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~ 182 (271)
T 1e0c_A 103 DVIGQQRYHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAA 182 (271)
T ss_dssp HHTTCCCEEEETTHHHHHHHTTCCCBCCCCCCCCSCCCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSS
T ss_pred HHcCCCCeEEecCCHHHHHHcCCCccCCCCCCCCCCccccCCccccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCC
Confidence 457899999999999999775432111 10 01122457999998888654 8899999999999
Q ss_pred -cCCCCCceeeccccccCC-CCCCCHHHHHHHHh--ccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHH
Q 031899 68 -AGHATGAINVPYMYRVGS-GMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWR 143 (151)
Q Consensus 68 -~ghIpgAi~ip~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~ 143 (151)
.||||||+|+|+..+... +.+..++.+...+. .++++++||+||++|.||..++..|+.+||++|++|+||+.+|.
T Consensus 183 ~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~ 262 (271)
T 1e0c_A 183 KGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWG 262 (271)
T ss_dssp SCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHT
T ss_pred cCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHh
Confidence 999999999999866532 22222245555555 47889999999999999999999999999999999999999999
Q ss_pred hC-CCCCCC
Q 031899 144 QN-GLPTEP 151 (151)
Q Consensus 144 ~~-g~pv~~ 151 (151)
++ |+|+++
T Consensus 263 ~~~~~pv~~ 271 (271)
T 1e0c_A 263 NHPDTPVEL 271 (271)
T ss_dssp TCTTCCCBC
T ss_pred cCCCCCCcC
Confidence 98 999975
No 9
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.96 E-value=6.9e-29 Score=187.02 Aligned_cols=146 Identities=19% Similarity=0.274 Sum_probs=120.4
Q ss_pred ccccccCccccccccccccccCccccCc--c--c-----c---cCCccccCHHHHHHHHhCCCEEEecCChhhHhc----
Q 031899 5 GDQQRCDNIGFISSKILSFCPKASLRGN--L--E-----A---VGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA---- 68 (151)
Q Consensus 5 ~~~~~~~~v~~l~gg~~~w~~~~~~~~~--~--~-----~---~~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~---- 68 (151)
....+|++|++|+||+..|......... . . . ......++.+++.++++++ +|||||++.||..
T Consensus 132 L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~ 210 (318)
T 3hzu_A 132 FTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTH 210 (318)
T ss_dssp HHHTTCSCEEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCCTTTBCCHHHHHHHTTTS-CEEECSCHHHHHTSCSS
T ss_pred HHHcCCCceEEccCCHHHHhhcCCCcccCCCCCCCCccccccCCCccccccHHHHHHhhcCC-eEEecCCHHHhcccccC
Confidence 3457899999999999999875432111 1 0 0 0112357899999988777 8999999999998
Q ss_pred ------------CCCCCceeecccccc-CCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHH-CCCCceeE
Q 031899 69 ------------GHATGAINVPYMYRV-GSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLN-AGFAGITD 134 (151)
Q Consensus 69 ------------ghIpgAi~ip~~~~~-~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~-~G~~~v~~ 134 (151)
||||||+|+|+..+. .++.+.+.+.+...+..++++++||+||++|.||..++..|++ +||++|++
T Consensus 211 ~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~ 290 (318)
T 3hzu_A 211 MPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRN 290 (318)
T ss_dssp CTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHTTTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEE
T ss_pred ccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHhcCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeE
Confidence 999999999997765 3567778788888877788999999999999999999999997 99999999
Q ss_pred ccccHHHHHh-CCCCCCC
Q 031899 135 IAGGFAAWRQ-NGLPTEP 151 (151)
Q Consensus 135 l~GG~~~W~~-~g~pv~~ 151 (151)
|+|||.+|.. .|+|+++
T Consensus 291 ~~GG~~~W~~~~g~Pv~~ 308 (318)
T 3hzu_A 291 YDGSWTEWGNAVRVPIVA 308 (318)
T ss_dssp CTTHHHHHTTSTTCCCBC
T ss_pred eCCcHHHHhcCCCCCccc
Confidence 9999999995 7999874
No 10
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-28 Score=165.49 Aligned_cols=113 Identities=23% Similarity=0.301 Sum_probs=95.3
Q ss_pred CccccCHHHHHHHHh---CCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHh--ccCCCCeEEEEeC
Q 031899 38 VPTSVPVRVAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQ 112 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~---~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~--~~~~~~~iv~~c~ 112 (151)
....|+++++.++++ ++++|||||++.||..||||||+|+|+..+. .....+.+.+...+. .++++++||+||.
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~ 99 (139)
T 3d1p_A 21 NIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHP-DAFALDPLEFEKQIGIPKPDSAKELIFYCA 99 (139)
T ss_dssp CCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCT-TGGGSCHHHHHHHHSSCCCCTTSEEEEECS
T ss_pred CcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhh-hhccCCHHHHHHHHhccCCCCCCeEEEECC
Confidence 456899999999886 4589999999999999999999999997552 233344445555544 3578899999999
Q ss_pred CChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 113 SGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 113 ~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
+|.||..++..|++.||++|++|+||+.+|..+|+|+.+
T Consensus 100 ~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 100 SGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred CCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999999864
No 11
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.96 E-value=4.3e-29 Score=186.34 Aligned_cols=145 Identities=14% Similarity=0.216 Sum_probs=117.7
Q ss_pred cccccCccccccccccccccCccccCcc--c--------ccCCccccCHHHHHHHHh-CCCEEEecCChhhH--------
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLRGNL--E--------AVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF-------- 66 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~~~~--~--------~~~~~~~i~~~~~~~~~~-~~~~iiDvR~~~e~-------- 66 (151)
...+|++|.+|+||+.+|.......... . .......++++++.++++ .+++|||||++.||
T Consensus 116 ~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~ 195 (296)
T 1rhs_A 116 RVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPD 195 (296)
T ss_dssp HHTTCCCEEEETTHHHHHHHTTCCCBCSCCCCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSS
T ss_pred HHcCCCcEEEcCCCHHHHHHcCCccccCCCCCCCCCcccCCCcceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcc
Confidence 4578999999999999997754321111 0 001124789999988775 45899999999999
Q ss_pred ----hcCCCCCceeeccccccC-CCCCCCHHHHHHHHhc--cCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 67 ----SAGHATGAINVPYMYRVG-SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 67 ----~~ghIpgAi~ip~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
..||||||+|+|+..+.. ++.+.+.+.+...+.. ++++++||+||.+|.||..++..|+.+||++|++|+||+
T Consensus 196 ~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~ 275 (296)
T 1rhs_A 196 AVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSW 275 (296)
T ss_dssp SSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHH
T ss_pred cCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcH
Confidence 889999999999987764 4566677777776653 688999999999999999999999999999999999999
Q ss_pred HHHHh-CCCCCC
Q 031899 140 AAWRQ-NGLPTE 150 (151)
Q Consensus 140 ~~W~~-~g~pv~ 150 (151)
.+|.. .++|++
T Consensus 276 ~~W~~~~~~pv~ 287 (296)
T 1rhs_A 276 FEWFHRAPPETW 287 (296)
T ss_dssp HHHHHHSCGGGE
T ss_pred HHHhcCCCCCcc
Confidence 99998 799986
No 12
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.96 E-value=2.8e-29 Score=161.22 Aligned_cols=94 Identities=32% Similarity=0.554 Sum_probs=77.9
Q ss_pred HHHHHHh---CCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHH
Q 031899 46 VAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAAT 122 (151)
Q Consensus 46 ~~~~~~~---~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~ 122 (151)
+++++++ ++++|||||++.||..||||||+|+|+. ++.......++++++||+||.+|.+|..+++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a~~ 70 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQAVN 70 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCEECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHHHH
Confidence 3455554 3489999999999999999999999994 3333444668889999999999999999999
Q ss_pred HHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 123 DLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 123 ~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
.|+..||+||++|+||+.+|.++|+|++
T Consensus 71 ~L~~~G~~~v~~l~GG~~~W~~~g~~~~ 98 (106)
T 3hix_A 71 LLRSAGFEHVSELKGGLAAWKAIGGPTE 98 (106)
T ss_dssp HHHHTTCSCEEECTTHHHHHHHTTCCEE
T ss_pred HHHHcCCcCEEEecCCHHHHHHCCCCCC
Confidence 9999999999999999999999999985
No 13
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.96 E-value=5.5e-29 Score=167.43 Aligned_cols=98 Identities=31% Similarity=0.514 Sum_probs=87.0
Q ss_pred cCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHH
Q 031899 42 VPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 118 (151)
Q Consensus 42 i~~~~~~~~~~~---~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~ 118 (151)
|+++++.++++. +++|||||++.||..||||||+|+|+. .+.......++++++||+||.+|.||.
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~rs~ 70 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTS 70 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGG-----------GHHHHHHTTSCTTSEEEEECSSHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHH-----------HHHHHHHhcCCCCCeEEEEECCChHHH
Confidence 688999888862 489999999999999999999999994 233333456889999999999999999
Q ss_pred HHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 119 MAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 119 ~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
.+++.|+..||++|++|+||+.+|.++|+|++
T Consensus 71 ~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 102 (141)
T 3ilm_A 71 QAVNLLRSAGFEHVSELKGGLAAWKAIGGPTE 102 (141)
T ss_dssp HHHHHHHHTTCCSEEECTTHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCCEEEecCHHHHHHHCCCCcc
Confidence 99999999999999999999999999999985
No 14
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.96 E-value=1.5e-28 Score=182.28 Aligned_cols=146 Identities=19% Similarity=0.304 Sum_probs=118.8
Q ss_pred cccccCccccccccccccccCccccC--ccc---------ccCCccccCHHHHHHHHh----CCCEEEecCChhhHh---
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLRG--NLE---------AVGVPTSVPVRVAHELLQ----AGHRYLDVRTPEEFS--- 67 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~~--~~~---------~~~~~~~i~~~~~~~~~~----~~~~iiDvR~~~e~~--- 67 (151)
...+|++|.+|.||+..|........ ... .......++++++.++++ .+..|||||++.||.
T Consensus 101 ~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~ 180 (285)
T 1uar_A 101 KYNGHKDVRLMNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGEL 180 (285)
T ss_dssp HHTTCSCEEEETTHHHHHHHHTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC
T ss_pred HHcCCCCeEEecCCHHHHHHCCCcccCCCCcccCCCcccccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCccceeeec
Confidence 45789999999999999976432111 111 001123589999998884 556799999999997
Q ss_pred -------------cCCCCCceeeccccccC-CCCCCCHHHHHHHHhc--cCCCCeEEEEeCCChhHHHHHHHHH-HCCCC
Q 031899 68 -------------AGHATGAINVPYMYRVG-SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLL-NAGFA 130 (151)
Q Consensus 68 -------------~ghIpgAi~ip~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~g~~a~~~~~~L~-~~G~~ 130 (151)
.||||||+|+|+..+.. ++.+.+.+.+...+.. ++++++||+||++|.||..+++.|+ .+||+
T Consensus 181 ~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~ 260 (285)
T 1uar_A 181 THMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYP 260 (285)
T ss_dssp --------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCS
T ss_pred cccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCC
Confidence 89999999999987653 4567778888887776 7889999999999999999999999 99999
Q ss_pred ceeEccccHHHHH-hCCCCCCC
Q 031899 131 GITDIAGGFAAWR-QNGLPTEP 151 (151)
Q Consensus 131 ~v~~l~GG~~~W~-~~g~pv~~ 151 (151)
+|++|+||+.+|. .+|+|+++
T Consensus 261 ~v~~l~GG~~~W~~~~g~pv~~ 282 (285)
T 1uar_A 261 HVKNYDGSWTEWGNLVGVPIAK 282 (285)
T ss_dssp CEEEESSHHHHHTTSTTCCCBC
T ss_pred CcceeCchHHHHhcCCCCCccc
Confidence 9999999999998 78999874
No 15
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=184.74 Aligned_cols=145 Identities=14% Similarity=0.238 Sum_probs=118.2
Q ss_pred ccccccCccccccccccccccCccccCc--c--c------ccCCccccCHHHHHHHHh-CCCEEEecCChhhH-------
Q 031899 5 GDQQRCDNIGFISSKILSFCPKASLRGN--L--E------AVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF------- 66 (151)
Q Consensus 5 ~~~~~~~~v~~l~gg~~~w~~~~~~~~~--~--~------~~~~~~~i~~~~~~~~~~-~~~~iiDvR~~~e~------- 66 (151)
....+|++|++|+||+.+|......... . . .......++.+++.++++ .+++|||||++.||
T Consensus 130 L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p 209 (302)
T 3olh_A 130 FRAFGHHAVSLLDGGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEP 209 (302)
T ss_dssp HHHTTCCCEEEETTHHHHHHHSCCC-CCSCCCCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCS
T ss_pred HHHcCCCcEEECCCCHHHHHHcCCCcccCCCCcCcCccccccCccceecHHHHHHhhcCCCcEEEecCCHHHccccccCC
Confidence 3457899999999999999875432111 1 0 011223688999987775 56899999999999
Q ss_pred ----hcCCCCCceeeccccccC-CCCCCCHHHHHHHHhc--cCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 67 ----SAGHATGAINVPYMYRVG-SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 67 ----~~ghIpgAi~ip~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
..||||||+|+|+..+.. .+.+.+.+.+...+.. ++++++||+||++|.||..++..|+.+||++|++|+|||
T Consensus 210 ~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~ 289 (302)
T 3olh_A 210 RDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSW 289 (302)
T ss_dssp STTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHH
T ss_pred CcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcH
Confidence 799999999999987764 4667788888877764 678999999999999999999999999999999999999
Q ss_pred HHHHhCCCCC
Q 031899 140 AAWRQNGLPT 149 (151)
Q Consensus 140 ~~W~~~g~pv 149 (151)
.+|..+++|.
T Consensus 290 ~~W~~~~~P~ 299 (302)
T 3olh_A 290 VEWYMRARPE 299 (302)
T ss_dssp HHHHHHHCCC
T ss_pred HHHhhccCCC
Confidence 9999999885
No 16
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.96 E-value=2.3e-28 Score=163.78 Aligned_cols=102 Identities=27% Similarity=0.449 Sum_probs=88.1
Q ss_pred CccccCHHHHHHHHh--C-CCEEEecCChhhHhc-CCCCCceeeccccccCCCCCCCHHHHHHHH--------hccCCCC
Q 031899 38 VPTSVPVRVAHELLQ--A-GHRYLDVRTPEEFSA-GHATGAINVPYMYRVGSGMTKNLKFVEEVS--------TRFRKHD 105 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~--~-~~~iiDvR~~~e~~~-ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 105 (151)
....|+++++.++++ + +++|||||++.||.. ||||||+|+|+..+ .... ..+++++
T Consensus 20 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l------------~~~~~~~~~~~~~~~~~~~ 87 (139)
T 2hhg_A 20 SIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGML------------EFWIDPQSPYAKPIFQEDK 87 (139)
T ss_dssp TSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGH------------HHHHCTTSTTCCGGGGSSS
T ss_pred hcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHH------------HHhcCccchhhhccCCCCC
Confidence 446799999999887 3 488999999999999 99999999999532 2211 2357899
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
+||+||.+|.||..+++.|+..||+||++|+||+.+|.++|+|+++
T Consensus 88 ~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 133 (139)
T 2hhg_A 88 KFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEA 133 (139)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC-
T ss_pred eEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeec
Confidence 9999999999999999999999999999999999999999999873
No 17
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.95 E-value=1.6e-28 Score=164.44 Aligned_cols=104 Identities=24% Similarity=0.370 Sum_probs=89.9
Q ss_pred CccccCHHHHHHHHh-C-CCEEEecCChhhHhc-CC--CCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeC
Q 031899 38 VPTSVPVRVAHELLQ-A-GHRYLDVRTPEEFSA-GH--ATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ 112 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~-~-~~~iiDvR~~~e~~~-gh--IpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~ 112 (151)
....|+++++.++++ + +++|||||++.||.. || ||||+|+|+..+. . ......++++++||+||.
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~---------~-~~~~~~l~~~~~ivvyC~ 90 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLE---------P-LLAKSGLDPEKPVVVFCK 90 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSH---------H-HHHHHCCCTTSCEEEECC
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhh---------h-HHhhccCCCCCeEEEEcC
Confidence 346789999999886 4 499999999999999 99 9999999995221 0 113456788999999999
Q ss_pred CChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 113 SGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 113 ~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
+|.||..+++.|++.||++|++|+||+.+|.++|+|+++
T Consensus 91 ~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (137)
T 1qxn_A 91 TAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLD 129 (137)
T ss_dssp SSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEEC
T ss_pred CCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccc
Confidence 999999999999999999999999999999999999863
No 18
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.95 E-value=4e-28 Score=179.38 Aligned_cols=145 Identities=20% Similarity=0.292 Sum_probs=115.2
Q ss_pred cccccCccccccccccccccCccccCcc-c---cc-------CCccccCHHHHHHHHhCCCEEEecCChhhHhc------
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLRGNL-E---AV-------GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA------ 68 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~~~~-~---~~-------~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~------ 68 (151)
...+|++|.+|.||+.+|.......... . .. .....++++++.+++.++. |||||++.||..
T Consensus 99 ~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~ 177 (277)
T 3aay_A 99 KLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN-LIDVRSPDEFSGKILAPA 177 (277)
T ss_dssp HHTTCCSEEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHHTTTTSE-EEECSCHHHHHTSCCC--
T ss_pred HHcCCCcEEEecCCHHHHHHcCCccccCCCCcCCCCccccCcccchhcCHHHHHHhcCCCC-EEEeCChHHeeeeecccc
Confidence 4578999999999999997754321111 0 00 0112367899988876555 999999999985
Q ss_pred ----------CCCCCceeeccccccC-CCCCCCHHHHHHHHhc--cCCCCeEEEEeCCChhHHHHHHHHHH-CCCCceeE
Q 031899 69 ----------GHATGAINVPYMYRVG-SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLLN-AGFAGITD 134 (151)
Q Consensus 69 ----------ghIpgAi~ip~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~g~~a~~~~~~L~~-~G~~~v~~ 134 (151)
||||||+|+|+..+.. .+.+.+.+.+...+.. ++++++||+||++|.||..++..|++ +||++|++
T Consensus 178 ~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~ 257 (277)
T 3aay_A 178 HLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKN 257 (277)
T ss_dssp ---CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEE
T ss_pred cccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCccee
Confidence 9999999999976543 4567777777776663 68899999999999999999999996 99999999
Q ss_pred ccccHHHHHh-CCCCCCC
Q 031899 135 IAGGFAAWRQ-NGLPTEP 151 (151)
Q Consensus 135 l~GG~~~W~~-~g~pv~~ 151 (151)
|+||+.+|.. +|+|+++
T Consensus 258 l~GG~~~W~~~~g~pv~~ 275 (277)
T 3aay_A 258 YDGSWTEYGSLVGAPIEL 275 (277)
T ss_dssp ESSHHHHHTTSTTCCCBC
T ss_pred eCchHHHHhcCCCCCCcc
Confidence 9999999999 8999874
No 19
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.95 E-value=9.4e-29 Score=155.44 Aligned_cols=93 Identities=24% Similarity=0.300 Sum_probs=77.1
Q ss_pred cccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHH
Q 031899 40 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMM 119 (151)
Q Consensus 40 ~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~ 119 (151)
..|+++++.++++++++|||||++.||..||||||+|+|+. .+......+++ ++||+||.+|.||..
T Consensus 2 ~~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gAi~ip~~------------~l~~~~~~l~~-~~ivvyC~~g~rs~~ 68 (94)
T 1wv9_A 2 RKVRPEELPALLEEGVLVVDVRPADRRSTPLPFAAEWVPLE------------KIQKGEHGLPR-RPLLLVCEKGLLSQV 68 (94)
T ss_dssp CEECGGGHHHHHHTTCEEEECCCC--CCSCCSSCCEECCHH------------HHTTTCCCCCS-SCEEEECSSSHHHHH
T ss_pred CcCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCCEECCHH------------HHHHHHHhCCC-CCEEEEcCCCChHHH
Confidence 35788888888877899999999999999999999999994 33334455678 999999999999999
Q ss_pred HHHHHHHCCCCceeEccccHHHHHhCC
Q 031899 120 AATDLLNAGFAGITDIAGGFAAWRQNG 146 (151)
Q Consensus 120 ~~~~L~~~G~~~v~~l~GG~~~W~~~g 146 (151)
+++.|++.||+ |++|+||+.+|.++|
T Consensus 69 a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 69 AALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHHTCC-EEEETTGGGCC----
T ss_pred HHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 99999999998 999999999998875
No 20
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.95 E-value=4.8e-28 Score=159.52 Aligned_cols=100 Identities=24% Similarity=0.287 Sum_probs=89.3
Q ss_pred ccccCHHHHHHHHhC---CCEEEecCChhhH-hcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC
Q 031899 39 PTSVPVRVAHELLQA---GHRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG 114 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~---~~~iiDvR~~~e~-~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g 114 (151)
...|+++++.+++++ +++|||||++.|| ..||||||+|+|+ ..+......++++++||+||.+|
T Consensus 14 ~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~------------~~l~~~~~~l~~~~~ivvyC~~g 81 (124)
T 3flh_A 14 SLYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPA------------KDLATRIGELDPAKTYVVYDWTG 81 (124)
T ss_dssp TTEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCH------------HHHHHHGGGSCTTSEEEEECSSS
T ss_pred cceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCH------------HHHHHHHhcCCCCCeEEEEeCCC
Confidence 356899999888764 3899999999998 9999999999999 55667777889999999999999
Q ss_pred hh--HHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 115 KR--SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 115 ~~--a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
.+ |..+++.|++.||+ |++|+||+.+|..+|+|+.+
T Consensus 82 ~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~ 119 (124)
T 3flh_A 82 GTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEH 119 (124)
T ss_dssp SCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC
T ss_pred CchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCc
Confidence 98 89999999999996 99999999999999999753
No 21
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.95 E-value=7.1e-28 Score=162.53 Aligned_cols=100 Identities=23% Similarity=0.352 Sum_probs=86.7
Q ss_pred cccCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC--
Q 031899 40 TSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 114 (151)
Q Consensus 40 ~~i~~~~~~~~~~~---~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g-- 114 (151)
..|+++++.+++++ +++|||||++.||..||||||+|+|+..+.. .....++++++||+||.+|
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~-----------~~~~~l~~~~~ivvyC~~g~~ 84 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINE-----------DTTKRLSKEKVIITYCWGPAC 84 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCST-----------TTTTTCCTTSEEEEECSCTTC
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhH-----------HHHhhCCCCCeEEEEECCCCc
Confidence 46799999988875 4899999999999999999999999953321 1334578899999999998
Q ss_pred hhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 115 KRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 115 ~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
.+|..+++.|+..|| +|++|+||+.+|.++|+|+++
T Consensus 85 ~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~ 120 (144)
T 3nhv_A 85 NGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEG 120 (144)
T ss_dssp CHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBS
T ss_pred cHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccC
Confidence 699999999999999 699999999999999999863
No 22
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.94 E-value=2.3e-27 Score=153.16 Aligned_cols=87 Identities=18% Similarity=0.319 Sum_probs=76.8
Q ss_pred hCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHh--ccCCCCeEEEEeCCChhHHHHHHHHHHCCC
Q 031899 52 QAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 52 ~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~--~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
.++++|||||++.||..||||||+|+|+. .+..... .++++++||+||.+|.||..+++.|+..||
T Consensus 14 ~~~~~liDvR~~~e~~~ghIpgAi~ip~~------------~l~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~ 81 (110)
T 2k0z_A 14 FNDFIVVDVRELDEYEELHLPNATLISVN------------DQEKLADFLSQHKDKKVLLHCRAGRRALDAAKSMHELGY 81 (110)
T ss_dssp GGGSEEEEEECHHHHHHSBCTTEEEEETT------------CHHHHHHHHHSCSSSCEEEECSSSHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhcccCCCCEEEEEeCCCchHHHHHHHHHHCCC
Confidence 45689999999999999999999999994 2333333 378899999999999999999999999999
Q ss_pred CceeEccccHHHHHhCCCCCCC
Q 031899 130 AGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 130 ~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
++ ++|+||+.+|.++|+|+++
T Consensus 82 ~~-~~l~GG~~~W~~~g~p~~~ 102 (110)
T 2k0z_A 82 TP-YYLEGNVYDFEKYGFRMVY 102 (110)
T ss_dssp CC-EEEESCGGGTTTTTCCCBC
T ss_pred CE-EEecCCHHHHHHCCCcEec
Confidence 99 9999999999999999863
No 23
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.94 E-value=1.2e-26 Score=185.50 Aligned_cols=133 Identities=19% Similarity=0.300 Sum_probs=112.9
Q ss_pred cccccCccccccc-cccccccCccccCcccccCCccccCHHHHHHHHhC-CCEEEecCChhhHhcCCCCCceeecccccc
Q 031899 6 DQQRCDNIGFISS-KILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRV 83 (151)
Q Consensus 6 ~~~~~~~v~~l~g-g~~~w~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~ 83 (151)
.+.+| +|..|+| |+.+|..................++++++.+++++ +.+|||||++.||..||||||+|+|.
T Consensus 343 ~~~G~-~v~~l~G~G~~~w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~---- 417 (539)
T 1yt8_A 343 AQMGW-QVAVLDGLSEADFSERGAWSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLR---- 417 (539)
T ss_dssp HHTTC-EEEEECSCCGGGCCBCSSCCCCCCCCCCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCG----
T ss_pred HHcCC-eEEEecCCChHHHHHhhccccCCCCCCcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCH----
Confidence 45788 8999999 99999876443222222234568999999998875 48899999999999999999999998
Q ss_pred CCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 84 GSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
..+...+..++++++||+||.+|.||..++..|+..||++|++|+||+.+|.++|+|+++
T Consensus 418 --------~~l~~~l~~l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 477 (539)
T 1yt8_A 418 --------SQLKQALERLGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTED 477 (539)
T ss_dssp --------GGHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBC
T ss_pred --------HHHHHHHHhCCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCccc
Confidence 455666666789999999999999999999999999999999999999999999999863
No 24
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.3e-26 Score=156.90 Aligned_cols=110 Identities=28% Similarity=0.440 Sum_probs=87.0
Q ss_pred ccccCHHHHHHHHh--CCCEEEecCChhhHhc-CCC------CCceeeccccccCCCCCCCHHHHHHHHhc-----cCCC
Q 031899 39 PTSVPVRVAHELLQ--AGHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTR-----FRKH 104 (151)
Q Consensus 39 ~~~i~~~~~~~~~~--~~~~iiDvR~~~e~~~-ghI------pgAi~ip~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 104 (151)
...|+++++.++++ ++++|||||++.||.. ||| |||+|+|+.. .. .. ..+.+.+.+... ++++
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~-~~-~~~~~~~~l~~~l~~~~~~~~ 80 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SD-GT-HNDNFLAELRDRIPADADQHE 80 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBC-TT-SC-BCTTHHHHHHHHCC-------
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeec-cc-cc-cCHHHHHHHHHHHhhccCCCC
Confidence 45789999998886 3699999999999997 999 9999999965 21 11 122333444332 3788
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH------------HHHHhCCCCCCC
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF------------AAWRQNGLPTEP 151 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~------------~~W~~~g~pv~~ 151 (151)
++|||||++|.||..+++.|+..||++|++|+||+ .+|+++|+|+++
T Consensus 81 ~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~ 139 (148)
T 2fsx_A 81 RPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQ 139 (148)
T ss_dssp CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEEC
T ss_pred CEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCc
Confidence 99999999999999999999999999999999999 789999999863
No 25
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.94 E-value=1.5e-26 Score=182.30 Aligned_cols=128 Identities=23% Similarity=0.365 Sum_probs=108.7
Q ss_pred cccccCccccccccccccccCccccCcccccCCccccCHHHHHHHHhC-CCEEEecCChhhHhcCCCCCceeeccccccC
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVG 84 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~ 84 (151)
...+|++|..+.+|+.+|....... .....++++++.+++++ +.+|||+|++.||..||||||+|+|+
T Consensus 346 ~~~G~~~v~~~l~G~~~W~~~g~~~------~~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~----- 414 (474)
T 3tp9_A 346 RSIGIDDVVDWTDPAAVDRAAPDDV------ASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPL----- 414 (474)
T ss_dssp HHTTCCCEEEEECGGGGTTCCGGGE------ECCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCH-----
T ss_pred HHcCCcceEEecCcHHHHHhccccc------ccccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCH-----
Confidence 4578999987555999998752211 12356899999888764 58999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 85 SGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
..+......++++++||+||++|.||..++..|+.+||++|++|+||+.+|.++|+|+++
T Consensus 415 -------~~l~~~~~~l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 415 -------SKLAAHIHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp -------HHHTTTGGGSCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred -------HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 444555566889999999999999999999999999999999999999999999999974
No 26
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.93 E-value=7e-26 Score=163.41 Aligned_cols=128 Identities=27% Similarity=0.380 Sum_probs=99.5
Q ss_pred cccCccccccccccccccCcccc-Ccccc--------cCCccccCHHHHHHHHhCCCEEEecCChhhHhc----------
Q 031899 8 QRCDNIGFISSKILSFCPKASLR-GNLEA--------VGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA---------- 68 (151)
Q Consensus 8 ~~~~~v~~l~gg~~~w~~~~~~~-~~~~~--------~~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~---------- 68 (151)
.+|++|++|+|| |.. .... +.... ......++.+++.+ +.+|||+|++.||..
T Consensus 84 ~G~~~v~~l~GG---W~~-~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ 155 (230)
T 2eg4_A 84 LGGLEVQLWTEG---WEP-YATEKEEPKPERTEVVAKLRRDWLLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRG 155 (230)
T ss_dssp HTTCCEEEECSS---CGG-GCCBCSCCCCCCCCCCCCCCGGGBCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSC
T ss_pred cCCceEEEeCCC---Ccc-CcccCCCCCcccccceecCCccceeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccC
Confidence 689999999999 866 3221 11110 01123577877765 788999999999999
Q ss_pred CCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCC
Q 031899 69 GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLP 148 (151)
Q Consensus 69 ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p 148 (151)
||||||+|+|+..+.... +.+.. ..++++++||+||++|.||..++..|+++| .+|++|+||+.+|..+|+|
T Consensus 156 ghIpgA~~ip~~~~~~~~-----e~~~~--~~~~~~~~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p 227 (230)
T 2eg4_A 156 GRIPGSKNAPLELFLSPE-----GLLER--LGLQPGQEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLP 227 (230)
T ss_dssp CBCTTCEECCGGGGGCCT-----THHHH--HTCCTTCEEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCC
T ss_pred CCCCCcEEcCHHHhCChH-----HHHHh--cCCCCCCCEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCC
Confidence 999999999997553321 11111 246889999999999999999999999999 8999999999999999999
Q ss_pred CCC
Q 031899 149 TEP 151 (151)
Q Consensus 149 v~~ 151 (151)
+++
T Consensus 228 ~~~ 230 (230)
T 2eg4_A 228 TEP 230 (230)
T ss_dssp CBC
T ss_pred CCC
Confidence 974
No 27
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.93 E-value=8.1e-26 Score=176.05 Aligned_cols=146 Identities=12% Similarity=0.154 Sum_probs=115.1
Q ss_pred cccccCccccccccccccccCccccC--cccc------------cCCccccCHHHHHHHHhC-CCEEEecCChhhH----
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLRG--NLEA------------VGVPTSVPVRVAHELLQA-GHRYLDVRTPEEF---- 66 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~~--~~~~------------~~~~~~i~~~~~~~~~~~-~~~iiDvR~~~e~---- 66 (151)
...+|++|.+|+||+..|........ .... ......++.+++.+++++ +.+|||||++.||
T Consensus 224 ~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~ 303 (423)
T 2wlr_A 224 LYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTT 303 (423)
T ss_dssp HHHTCSCEEEETTTHHHHHHTTCCCBCSSCCCCCCCCCCSSCSCSCGGGEECHHHHHTTTTCSSEEEEECSCHHHHHTSC
T ss_pred HHcCCCCeEEECCCHHHHhhCCCCcccCCCCCCCCCcCcccccCCChhheecHHHHHHHhcCCCceEEecCchhheeeec
Confidence 45789999999999999976432211 1110 011235889999887764 4889999999999
Q ss_pred -------hcCCCCCceeeccc-------ccc-CCCCCCCHHHHHHHHh--ccCCCCeEEEEeCCChhHHHHHHHHHHCCC
Q 031899 67 -------SAGHATGAINVPYM-------YRV-GSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 67 -------~~ghIpgAi~ip~~-------~~~-~~~~~~~~~~~~~~~~--~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
..||||||+|+|+. ++. .++.+.+.+.+...+. .++++++||+||++|.||..++..|+.+||
T Consensus 304 ~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~ 383 (423)
T 2wlr_A 304 SGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGW 383 (423)
T ss_dssp CSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTC
T ss_pred cCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCC
Confidence 89999999999985 222 2455667777777664 468899999999999999999999999999
Q ss_pred CceeEccccHHHHHh-CCCCCCC
Q 031899 130 AGITDIAGGFAAWRQ-NGLPTEP 151 (151)
Q Consensus 130 ~~v~~l~GG~~~W~~-~g~pv~~ 151 (151)
++|++|+||+.+|.. .|+|+++
T Consensus 384 ~~v~~~~GG~~~W~~~~~~Pv~~ 406 (423)
T 2wlr_A 384 KNVSVYDGGWYEWSSDPKNPVAT 406 (423)
T ss_dssp SSEEEESSHHHHHTTSTTSCEEC
T ss_pred CCcceeCccHHHHhcCCCCCccc
Confidence 999999999999998 8999863
No 28
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.93 E-value=1.7e-25 Score=164.84 Aligned_cols=113 Identities=19% Similarity=0.169 Sum_probs=97.5
Q ss_pred ccccCHHHHHHHHhC-CCEEEecCChhhHhcCCCCCceeeccccccCC-----CCCCCHHHHHHHHhc--cCCCCeEEEE
Q 031899 39 PTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR--FRKHDEIIVG 110 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~-~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~iv~~ 110 (151)
+..|+++++.+++++ +++|||||++.||..||||||+|+|+..+... +++.+.+.+...+.. ++++++||||
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 87 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVY 87 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 457899999988854 58999999999999999999999999765432 455666677776665 6889999999
Q ss_pred eCCCh-hHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 111 CQSGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 111 c~~g~-~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
|++|. +|.++++.|+..||++|++|+||+.+|..+|+|+++
T Consensus 88 c~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~ 129 (271)
T 1e0c_A 88 DDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSR 129 (271)
T ss_dssp CSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred cCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccC
Confidence 99987 999999999999999999999999999999999863
No 29
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.93 E-value=1.6e-26 Score=157.24 Aligned_cols=106 Identities=19% Similarity=0.289 Sum_probs=88.1
Q ss_pred CccccCHHHHHHHHh-CCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeC-CCh
Q 031899 38 VPTSVPVRVAHELLQ-AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ-SGK 115 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~-~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~-~g~ 115 (151)
....|+++++.++++ ++++|||||++.||..||||||+|+|+..+. +.+..+...++++++||+||+ +|.
T Consensus 26 ~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~--------~~~~~l~~~~~~~~~iVvyC~~~G~ 97 (152)
T 1t3k_A 26 SISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFD--------DKISHLVQNVKDKDTLVFHSALSQV 97 (152)
T ss_dssp SSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSS--------TTHHHHHHTCCSCCEEEESSSCCSS
T ss_pred CCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHH--------HHHHHHHHhcCCCCEEEEEcCCCCc
Confidence 346788888887775 3589999999999999999999999995432 234555555678999999999 999
Q ss_pred hHHHHHHHHH--------HCCCCceeEccccHHHHHhCCCCCCC
Q 031899 116 RSMMAATDLL--------NAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 116 ~a~~~~~~L~--------~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
|+..++..|. ..||++|++|+||+.+|.++|+|+++
T Consensus 98 rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 141 (152)
T 1t3k_A 98 RGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCR 141 (152)
T ss_dssp SHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCC
T ss_pred chHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCcccc
Confidence 9988888774 38999999999999999999999874
No 30
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.92 E-value=4.7e-25 Score=166.09 Aligned_cols=113 Identities=16% Similarity=0.186 Sum_probs=96.4
Q ss_pred ccccCHHHHHHHHhC-CCEEEecCChhh-HhcCCCCCceeecccccc---CCCCCCCHHHHHHHHhc--cCCCCeEEEEe
Q 031899 39 PTSVPVRVAHELLQA-GHRYLDVRTPEE-FSAGHATGAINVPYMYRV---GSGMTKNLKFVEEVSTR--FRKHDEIIVGC 111 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~-~~~iiDvR~~~e-~~~ghIpgAi~ip~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~iv~~c 111 (151)
...|+++++.+++++ +++|||||++.| |..||||||+|+|+...+ ....+.+.+.+...+.. ++++++||+||
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc 118 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 457999999998864 589999999876 999999999999985333 23456666777777666 67899999999
Q ss_pred CCCh-hHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 112 QSGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 112 ~~g~-~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
++|. +|.++++.|+..||++|++|+||+.+|.++|+|+++
T Consensus 119 ~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 159 (318)
T 3hzu_A 119 DKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTL 159 (318)
T ss_dssp SGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBC
T ss_pred CCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCccc
Confidence 9887 899999999999999999999999999999999863
No 31
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.92 E-value=4.8e-25 Score=171.68 Aligned_cols=140 Identities=17% Similarity=0.244 Sum_probs=113.5
Q ss_pred cccccCccccccccccccccCccccCcccccCCccccCHHHHHHHHh---------CCCEEEecC--ChhhHhcCCCCCc
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQ---------AGHRYLDVR--TPEEFSAGHATGA 74 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~~~~iiDvR--~~~e~~~ghIpgA 74 (151)
...++++|.+|+||+.+ ..... ........++++++.++++ ++++|||+| ++.||..||||||
T Consensus 96 ~~~G~~~V~vl~Gg~~~---~g~~~---~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA 169 (423)
T 2wlr_A 96 QKAGLTHISILSDALSE---PSRLQ---KLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGA 169 (423)
T ss_dssp HHTTCCCEEEBTTTTSC---GGGCB---CCTTGGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTC
T ss_pred HHcCCceeEeccchhhc---CCCcc---cCCCCCcccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCc
Confidence 45789999999997532 11100 1112335789999988876 358899999 9999999999999
Q ss_pred eeeccccccC--CCCCCCHHHHHHHHhc--cCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 75 INVPYMYRVG--SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 75 i~ip~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
+|+|+..+.. .+.+.+.+.+...+.. ++++++||+||++|.+|..++..|+.+||++|++|+||+.+|..+|+|++
T Consensus 170 ~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~ 249 (423)
T 2wlr_A 170 DYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVE 249 (423)
T ss_dssp EEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCB
T ss_pred EEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcc
Confidence 9999977643 3567777888877754 57899999999999999999999999999999999999999999999986
Q ss_pred C
Q 031899 151 P 151 (151)
Q Consensus 151 ~ 151 (151)
+
T Consensus 250 ~ 250 (423)
T 2wlr_A 250 R 250 (423)
T ss_dssp C
T ss_pred c
Confidence 3
No 32
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.92 E-value=1.9e-25 Score=148.22 Aligned_cols=104 Identities=25% Similarity=0.402 Sum_probs=79.2
Q ss_pred ccccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCC----------C-----------CCCCHHHHHHH
Q 031899 39 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGS----------G-----------MTKNLKFVEEV 97 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~----------~-----------~~~~~~~~~~~ 97 (151)
...|+++++.+ .++++|||||++.||..||||||+|+|+..+... + .......+...
T Consensus 4 ~~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (134)
T 3g5j_A 4 MSVIKIEKALK--LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYLQ 81 (134)
T ss_dssp -CEECHHHHTT--CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHHHH
T ss_pred ccccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHHHH
Confidence 35678888765 5668999999999999999999999999532100 0 00000122233
Q ss_pred HhccCCC-CeEEEEe-CCChhHHHHHHHHHHCCCCceeEccccHHHHHhC
Q 031899 98 STRFRKH-DEIIVGC-QSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQN 145 (151)
Q Consensus 98 ~~~~~~~-~~iv~~c-~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~ 145 (151)
...++++ ++||+|| .+|.||..+++.|+..|| +|++|+||+.+|.+.
T Consensus 82 ~~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 82 AAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred HHHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence 3446677 9999999 589999999999999999 999999999999874
No 33
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.92 E-value=4.8e-25 Score=163.14 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=95.7
Q ss_pred cccCHHHHHHHHhC-CCEEEecC----------ChhhHhcCCCCCceeeccccccCC-----CCCCCHHHHHHHHhc--c
Q 031899 40 TSVPVRVAHELLQA-GHRYLDVR----------TPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR--F 101 (151)
Q Consensus 40 ~~i~~~~~~~~~~~-~~~iiDvR----------~~~e~~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~~~~~--~ 101 (151)
..|+++++.+++++ +++||||| ++.||..||||||+|+|+..+... .++++.+.+...+.. +
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 83 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGV 83 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTTC
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 46899999988864 58999999 789999999999999999765432 355566777776665 5
Q ss_pred CCCCeEEEEeCCChh-HHHHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 102 RKHDEIIVGCQSGKR-SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~-a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
+++++||+||++|.+ |.++++.|+.+||++|++|+||+.+|..+|+|++
T Consensus 84 ~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 133 (280)
T 1urh_A 84 NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLE 133 (280)
T ss_dssp CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCB
T ss_pred CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCccc
Confidence 789999999999988 9999999999999999999999999999999986
No 34
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.92 E-value=1.3e-25 Score=147.93 Aligned_cols=106 Identities=24% Similarity=0.223 Sum_probs=82.1
Q ss_pred ccCHHHHHHHHhC--CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhc---------cCCCCeEEE
Q 031899 41 SVPVRVAHELLQA--GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR---------FRKHDEIIV 109 (151)
Q Consensus 41 ~i~~~~~~~~~~~--~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~iv~ 109 (151)
.|+++++.+++++ +++|||||++.||..||||||+|+|+..+... ....+..+... .+++++||+
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~ivv 77 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERR----DAESLKLLKEAIWEEKQGTQEGAAVPIYV 77 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTT----CHHHHHHHHHHHHHHHTTC---CCEEEEE
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhh----hhhhHHHHHHHHhhhcccccCCCCCeEEE
Confidence 5789999988864 38999999999999999999999999654321 11111111111 234569999
Q ss_pred EeCCChhHHHHHHHHHHC------CCCceeEccccHHHHHhCCCCCC
Q 031899 110 GCQSGKRSMMAATDLLNA------GFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 110 ~c~~g~~a~~~~~~L~~~------G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
||.+|.+|..+++.|++. ||.+|++|+||+.+|.++..|..
T Consensus 78 ~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~~ 124 (127)
T 3i2v_A 78 ICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTF 124 (127)
T ss_dssp ECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTTS
T ss_pred EcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCCC
Confidence 999999999999999998 68899999999999998776643
No 35
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.92 E-value=1e-25 Score=138.93 Aligned_cols=77 Identities=32% Similarity=0.567 Sum_probs=68.7
Q ss_pred CEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhcc--CCCCeEEEEeCCChhHHHHHHHHHHCCCCce
Q 031899 55 HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQSGKRSMMAATDLLNAGFAGI 132 (151)
Q Consensus 55 ~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v 132 (151)
++|||||++.||..||||||+|+|+ ..+......+ +++++||+||.+|.||..+++.|++.||+++
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPL------------KEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCH------------HHHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSE
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCH------------HHHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999 4455555555 7899999999999999999999999999999
Q ss_pred eEccccHHHHHh
Q 031899 133 TDIAGGFAAWRQ 144 (151)
Q Consensus 133 ~~l~GG~~~W~~ 144 (151)
+++ ||+.+|..
T Consensus 70 ~~l-GG~~~w~~ 80 (85)
T 2jtq_A 70 ENA-GGLKDIAM 80 (85)
T ss_dssp EEE-EETTTCCS
T ss_pred Eec-cCHHHHhc
Confidence 999 99999953
No 36
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.92 E-value=2.5e-26 Score=176.31 Aligned_cols=140 Identities=14% Similarity=0.191 Sum_probs=104.4
Q ss_pred ccccccCccccccccccccccCcccc--Cccccc-------C-----CccccCHHHHHHHHhCCCEEEecCChhhHh---
Q 031899 5 GDQQRCDNIGFISSKILSFCPKASLR--GNLEAV-------G-----VPTSVPVRVAHELLQAGHRYLDVRTPEEFS--- 67 (151)
Q Consensus 5 ~~~~~~~~v~~l~gg~~~w~~~~~~~--~~~~~~-------~-----~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~--- 67 (151)
....+| +|++|+||+.+|....... +..... . .+..+ .+++ ..+.+|||||++.||.
T Consensus 117 L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v----~~~~~lIDvR~~~Ef~G~~ 190 (373)
T 1okg_A 117 LNSLGA-DAYVINGGFQACKAAGLEMESGEPSSLPRPATHWPFKTAFQHHYL-VDEI----PPQAIITDARSADRFASTV 190 (373)
T ss_dssp HHHHTC-CEEEETTTTHHHHTTTCCEECSCCCSCCCCCCCCCSCSSCCSBCC-GGGS----CTTCCEEECSCHHHHTCCS
T ss_pred HHHcCC-eEEEeCCCHHHHHhhcCCcccCCCCcCccccccccccccCChHHH-HHHh----ccCceEEeCCCHHHccccc
Confidence 345789 9999999999998754321 111000 0 01111 1111 4568899999999999
Q ss_pred --------cCCCCCceeecccccc--C-CCC-CCCHHHHHHHHhcc----CC---CCeEEEEeCCChhHHHHHHHHHHCC
Q 031899 68 --------AGHATGAINVPYMYRV--G-SGM-TKNLKFVEEVSTRF----RK---HDEIIVGCQSGKRSMMAATDLLNAG 128 (151)
Q Consensus 68 --------~ghIpgAi~ip~~~~~--~-~~~-~~~~~~~~~~~~~~----~~---~~~iv~~c~~g~~a~~~~~~L~~~G 128 (151)
.||||||+|+|+..+. . ++. +.+.+.+...+..+ ++ +++||+||++|.||..++..|+.+|
T Consensus 191 ~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G 270 (373)
T 1okg_A 191 RPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLG 270 (373)
T ss_dssp SCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHHTT
T ss_pred cccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEEECCchHHHHHHHHHHHHcC
Confidence 9999999999998765 3 334 66677777766654 77 8999999999999999999999999
Q ss_pred CCceeEccccHHHHHh-CCCCCC
Q 031899 129 FAGITDIAGGFAAWRQ-NGLPTE 150 (151)
Q Consensus 129 ~~~v~~l~GG~~~W~~-~g~pv~ 150 (151)
|++|++|+|||.+|.. .++|++
T Consensus 271 ~~~v~~~~GG~~~W~~~~~~pv~ 293 (373)
T 1okg_A 271 LGHPYLYCGSWSEYSGLFRPPIM 293 (373)
T ss_dssp SCCCEECSSHHHHHHHHTHHHHH
T ss_pred CCCeeEeCChHHHHhcCCCCCcc
Confidence 9999999999999987 677753
No 37
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.92 E-value=2.1e-25 Score=148.66 Aligned_cols=106 Identities=21% Similarity=0.302 Sum_probs=86.4
Q ss_pred ccccCHHHHHHHHh--CCCEEEecCChhhHhc-CCC------CCceeeccccccCCCCCCCHHHHHHHHhcc--CCCCeE
Q 031899 39 PTSVPVRVAHELLQ--AGHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEI 107 (151)
Q Consensus 39 ~~~i~~~~~~~~~~--~~~~iiDvR~~~e~~~-ghI------pgAi~ip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i 107 (151)
...|+++++.++++ ++++|||||++.||.. +|+ |||+|+|+..+ ....++..+...+ +++++|
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~------~~~~~~~~l~~~~~~~~~~~i 77 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGE------DKPGFLKKLSLKFKDPENTTL 77 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGG------GHHHHHHHHHTTCSCGGGCEE
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccc------cChhHHHHHHHHhCCCCCCEE
Confidence 35689999998886 3589999999999985 333 79999998532 1223444444333 678999
Q ss_pred EEEeCCChhHHHHHHHHHHCCCCceeEccccH---HHHHhCCCCCC
Q 031899 108 IVGCQSGKRSMMAATDLLNAGFAGITDIAGGF---AAWRQNGLPTE 150 (151)
Q Consensus 108 v~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~---~~W~~~g~pv~ 150 (151)
|+||.+|.||..++..|+++||++|++|.||+ .+|.++|+|++
T Consensus 78 vv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~ 123 (134)
T 1vee_A 78 YILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWI 123 (134)
T ss_dssp EEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEE
T ss_pred EEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCC
Confidence 99999999999999999999999999999999 78999999986
No 38
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.91 E-value=5.7e-24 Score=158.62 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=95.3
Q ss_pred ccccCHHHHHHHHhC-----CCEEEecC--------ChhhHhcCCCCCceeeccccccCC-----CCCCCHHHHHHHHhc
Q 031899 39 PTSVPVRVAHELLQA-----GHRYLDVR--------TPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR 100 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~-----~~~iiDvR--------~~~e~~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~~~~~ 100 (151)
...|+++++.+++++ +++||||| ++.||..||||||+|+|+..+... .++++.+.+...+..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 457899999998875 58999999 689999999999999999754421 345566666666664
Q ss_pred --cCCCCeEEEEeCC--Chh-HHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 101 --FRKHDEIIVGCQS--GKR-SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 101 --~~~~~~iv~~c~~--g~~-a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
++++++||+||.+ |.+ +.++++.|+.+||++|++|+||+.+|..+|+|+++
T Consensus 87 lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 142 (296)
T 1rhs_A 87 LGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTS 142 (296)
T ss_dssp TTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred cCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCcccc
Confidence 5789999999998 765 88999999999999999999999999999999863
No 39
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.91 E-value=2.5e-24 Score=158.99 Aligned_cols=112 Identities=16% Similarity=0.225 Sum_probs=94.0
Q ss_pred cccCHHHHHHHHhC-CCEEEecCC-hhhHhcCCCCCceeeccccccC---CCCCCCHHHHHHHHhc--cCCCCeEEEEeC
Q 031899 40 TSVPVRVAHELLQA-GHRYLDVRT-PEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 112 (151)
Q Consensus 40 ~~i~~~~~~~~~~~-~~~iiDvR~-~~e~~~ghIpgAi~ip~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~iv~~c~ 112 (151)
..|+++++.+++++ +++|||||+ +.||..||||||+|+|+..+.. ...+.+.+.+...+.. ++++++|||||.
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc~ 85 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGG 85 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEECS
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 46899999888765 488999998 8999999999999999865332 2344555666666665 688999999999
Q ss_pred CCh-hHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 113 SGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 113 ~g~-~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
+|. +|.++++.|+.+||++|++|+||+.+|..+|+|+++
T Consensus 86 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 125 (277)
T 3aay_A 86 NNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSS 125 (277)
T ss_dssp GGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBC
T ss_pred CCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCcccc
Confidence 874 788999999999999999999999999999999863
No 40
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=157.65 Aligned_cols=114 Identities=18% Similarity=0.206 Sum_probs=94.6
Q ss_pred CccccCHHHHHHHHhC-----CCEEEecC---------ChhhHhcCCCCCceeeccccccC-----CCCCCCHHHHHHHH
Q 031899 38 VPTSVPVRVAHELLQA-----GHRYLDVR---------TPEEFSAGHATGAINVPYMYRVG-----SGMTKNLKFVEEVS 98 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~-----~~~iiDvR---------~~~e~~~ghIpgAi~ip~~~~~~-----~~~~~~~~~~~~~~ 98 (151)
....|+++++.+++++ +++||||| ++.||..||||||+|+|+..+.. ..++++.+.+...+
T Consensus 20 ~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~ 99 (302)
T 3olh_A 20 FQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYA 99 (302)
T ss_dssp CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHH
T ss_pred CCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHH
Confidence 3467999999998875 68999999 78999999999999999865432 24455666777776
Q ss_pred hcc--CCCCeEEEEeCC---ChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCCC
Q 031899 99 TRF--RKHDEIIVGCQS---GKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 151 (151)
Q Consensus 99 ~~~--~~~~~iv~~c~~---g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 151 (151)
..+ +++++||+||++ +.+|.++++.|+..||++|++|+||+.+|.++|+|+++
T Consensus 100 ~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 157 (302)
T 3olh_A 100 GRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSS 157 (302)
T ss_dssp HHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CC
T ss_pred HHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCccc
Confidence 664 789999999964 35699999999999999999999999999999999863
No 41
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.90 E-value=9.9e-24 Score=150.49 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=84.3
Q ss_pred CccccCHHHHHHHHhC-------CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHh---ccC--CCC
Q 031899 38 VPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KHD 105 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~-------~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~---~~~--~~~ 105 (151)
....|+++++.+++++ +++|||||++.||..||||||+|+|+. ........ .++ +++
T Consensus 42 ~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~-----------~l~~~~~~~~~~l~~~~d~ 110 (211)
T 1qb0_A 42 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLDK 110 (211)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHTTTCCCSSTTS
T ss_pred CCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCch-----------HHHHHhhhhhhhccccCCC
Confidence 4568999999998875 588999999999999999999999994 22222222 343 678
Q ss_pred eE--EEEeC-CChhHHHHHHHHHH----------CCCCceeEccccHHHHHhCCCCC
Q 031899 106 EI--IVGCQ-SGKRSMMAATDLLN----------AGFAGITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 106 ~i--v~~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~GG~~~W~~~g~pv 149 (151)
++ |+||. +|.|+..++..|++ .||++|++|+||+.+|.++|.|+
T Consensus 111 ~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~ 167 (211)
T 1qb0_A 111 RVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 167 (211)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccc
Confidence 87 78899 99999999999986 69999999999999999998875
No 42
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.90 E-value=2.2e-24 Score=159.87 Aligned_cols=111 Identities=16% Similarity=0.195 Sum_probs=93.9
Q ss_pred cccCHHHHHHHHhC-CCEEEecC-ChhhHhcCCCCCceeeccccccC---CCCCCCHHHHHHHHhc--cCCCCeEEEEeC
Q 031899 40 TSVPVRVAHELLQA-GHRYLDVR-TPEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 112 (151)
Q Consensus 40 ~~i~~~~~~~~~~~-~~~iiDvR-~~~e~~~ghIpgAi~ip~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~iv~~c~ 112 (151)
..|+++++.+++++ +++||||| ++.+|..||||||+|+|+..... ...+.+.+.+...+.. ++++++||+||+
T Consensus 8 ~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivvyc~ 87 (285)
T 1uar_A 8 VLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGD 87 (285)
T ss_dssp GEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEECH
T ss_pred ceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 57899999988875 58899999 78999999999999999864332 2345555566666665 578999999999
Q ss_pred CCh-hHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 113 SGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 113 ~g~-~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
+|. +|.++++.|+..||++|++|+||+.+|..+|+|++
T Consensus 88 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 126 (285)
T 1uar_A 88 KNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLT 126 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCB
T ss_pred CCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCccc
Confidence 987 79999999999999999999999999999999985
No 43
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.90 E-value=1.2e-23 Score=145.99 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=81.1
Q ss_pred CccccCHHHHHHHHhC-------CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHh---ccC--CCC
Q 031899 38 VPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KHD 105 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~-------~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~---~~~--~~~ 105 (151)
....|+++++.+++++ +++|||||++.||..||||||+|+|+. +....... .++ +++
T Consensus 22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~-----------~l~~~~~~~~~~~~~~~~~ 90 (175)
T 2a2k_A 22 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLDK 90 (175)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHSSCCCC----C
T ss_pred CCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChh-----------HHHHHhhhhhhhccccCCC
Confidence 4567999999998874 588999999999999999999999994 22222222 133 678
Q ss_pred eEEE--EeC-CChhHHHHHHHHHH----------CCCCceeEccccHHHHHhCCCCC
Q 031899 106 EIIV--GCQ-SGKRSMMAATDLLN----------AGFAGITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 106 ~iv~--~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~GG~~~W~~~g~pv 149 (151)
+||+ ||+ +|.||..++..|++ +||++|++|+||+.+|.+++.|+
T Consensus 91 ~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~ 147 (175)
T 2a2k_A 91 RVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 147 (175)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccc
Confidence 8754 698 89999999999985 49999999999999999998775
No 44
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.90 E-value=7.4e-24 Score=145.12 Aligned_cols=101 Identities=17% Similarity=0.292 Sum_probs=83.0
Q ss_pred CccccCHHHHHHHHhC-------CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHh---cc-CCCCe
Q 031899 38 VPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RF-RKHDE 106 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~-------~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~ 106 (151)
....|+++++.+++++ +++|||||++.||..||||||+|+|+. +....... .+ +++++
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~-----------~~~~~~~~~~~~~~~~~~~ 89 (161)
T 1c25_A 21 DLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHME-----------EEVEDFLLKKPIVPTDGKR 89 (161)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHTTTSCCCCCTTSE
T ss_pred CcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChh-----------HHHHHHHhhhhhccCCCCC
Confidence 3467999999998875 588999999999999999999999994 22233222 22 56778
Q ss_pred E--EEEeC-CChhHHHHHHHHHH----------CCCCceeEccccHHHHHhCCCCC
Q 031899 107 I--IVGCQ-SGKRSMMAATDLLN----------AGFAGITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 107 i--v~~c~-~g~~a~~~~~~L~~----------~G~~~v~~l~GG~~~W~~~g~pv 149 (151)
+ |+||. +|.||..++..|++ .||++|++|+||+.+|.+++.|+
T Consensus 90 ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~ 145 (161)
T 1c25_A 90 VIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSY 145 (161)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGG
T ss_pred eEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccc
Confidence 6 67899 99999999999986 49999999999999999988765
No 45
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.90 E-value=8.9e-24 Score=168.94 Aligned_cols=134 Identities=19% Similarity=0.305 Sum_probs=107.4
Q ss_pred cccccCccccccccccccccCcccc--Ccccc----------cCCccccCHHHHHHHHhC--CCEEEecCChhhHhcCCC
Q 031899 6 DQQRCDNIGFISSKILSFCPKASLR--GNLEA----------VGVPTSVPVRVAHELLQA--GHRYLDVRTPEEFSAGHA 71 (151)
Q Consensus 6 ~~~~~~~v~~l~gg~~~w~~~~~~~--~~~~~----------~~~~~~i~~~~~~~~~~~--~~~iiDvR~~~e~~~ghI 71 (151)
...+|++|.+|.||+.+|....... +.... ......++++++.+++.+ +.+|||+|++.||..|||
T Consensus 84 ~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~g~~~~~~~~~~~it~~~l~~~l~~~~~~~llDvR~~~e~~~ghI 163 (539)
T 1yt8_A 84 HDLGYSDVALLDGGLSGWRNAGGELFRDVNVPSKAFGELVEAERHTPSLAAEEVQALLDARAEAVILDARRFDEYQTMSI 163 (539)
T ss_dssp HHTTCSSEEEETTHHHHHHHTTCCCBCSSSHHHHHHHHHHHHHHCCCEECHHHHHHHHHTTCSEEEEECSCHHHHHHSBC
T ss_pred HHcCCCceEEeCCCHHHHHhcCCCcccCCcCcCcchhhhhhhhcCCCccCHHHHHHHHhCCCCcEEEeCCCHHHHhcCcC
Confidence 4578999999999999998764321 11000 012346899999888864 478999999999999999
Q ss_pred CCceeeccccccCCCCCCCHHHHHHHHhcc--CCCCeEEEEeCCChhHHHHHHHHHHCCCCc-eeEccccHHHHHhCCCC
Q 031899 72 TGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQSGKRSMMAATDLLNAGFAG-ITDIAGGFAAWRQNGLP 148 (151)
Q Consensus 72 pgAi~ip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~-v~~l~GG~~~W~~~g~p 148 (151)
|||+|+|+.. +......+ +++++||+||++|.+|..++..|+..||++ |+.+.||+.+|..+|+|
T Consensus 164 pgA~~ip~~~------------l~~~~~~l~~~~d~~iV~~C~~g~rs~~~~~~L~~~G~~~~v~~l~gG~~~W~~~g~p 231 (539)
T 1yt8_A 164 PGGISVPGAE------------LVLRVAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQ 231 (539)
T ss_dssp TTCEECCGGG------------HHHHHHHHCCSTTSEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHHHHHHHTTCC
T ss_pred CCCEeCCHHH------------HHHHHHhhCCCCCCeEEEECCCChHHHHHHHHHHHcCCCcceeeccCCHHHHHhCCCC
Confidence 9999999952 22223333 688999999999999999999999999999 78999999999999999
Q ss_pred CCC
Q 031899 149 TEP 151 (151)
Q Consensus 149 v~~ 151 (151)
+++
T Consensus 232 ~~~ 234 (539)
T 1yt8_A 232 LEH 234 (539)
T ss_dssp CBC
T ss_pred cee
Confidence 863
No 46
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.89 E-value=1.3e-23 Score=161.19 Aligned_cols=110 Identities=16% Similarity=0.078 Sum_probs=92.6
Q ss_pred ccccCHHHHHHHHhCCCEEEecCC--------hhhHhcCCCCCceeecccc-ccC-------CCCCCCHHHHHHHHhc--
Q 031899 39 PTSVPVRVAHELLQAGHRYLDVRT--------PEEFSAGHATGAINVPYMY-RVG-------SGMTKNLKFVEEVSTR-- 100 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~~~~iiDvR~--------~~e~~~ghIpgAi~ip~~~-~~~-------~~~~~~~~~~~~~~~~-- 100 (151)
...++++++.+++++ ++|||||+ +.||..||||||+|+|+.. +.. ...+++.+.+...+..
T Consensus 13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~g 91 (373)
T 1okg_A 13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANG 91 (373)
T ss_dssp CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHTT
T ss_pred CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHcC
Confidence 468999999888776 99999998 6999999999999999975 432 2345566666665543
Q ss_pred cCCCCeEEEEe-CCChhHH-HHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 101 FRKHDEIIVGC-QSGKRSM-MAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 101 ~~~~~~iv~~c-~~g~~a~-~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
++++++||+|| .+|.+++ ++++.|+.+|| +|++|+||+.+|.++|+|++
T Consensus 92 i~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~ 142 (373)
T 1okg_A 92 MAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEME 142 (373)
T ss_dssp CSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEE
T ss_pred CCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcc
Confidence 57899999999 7787876 99999999999 99999999999999999975
No 47
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.89 E-value=7.4e-24 Score=143.92 Aligned_cols=109 Identities=18% Similarity=0.179 Sum_probs=78.8
Q ss_pred cccCHHHHHHHHh---CCCEEEecCChhhHhcCCCCCceeeccccccC----CCCCCCHHHH-HHHHh--ccCCCCeEEE
Q 031899 40 TSVPVRVAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVG----SGMTKNLKFV-EEVST--RFRKHDEIIV 109 (151)
Q Consensus 40 ~~i~~~~~~~~~~---~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~----~~~~~~~~~~-~~~~~--~~~~~~~iv~ 109 (151)
+.|+++++.++++ ++++|||||++.||..||||||+|+|+..+.. .+.......+ ..... .++++++|||
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iVv 83 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVVV 83 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEEE
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEEE
Confidence 5689999999886 35899999999999999999999999964311 0111000110 00001 2467899999
Q ss_pred EeCCChhHHHH------HHHHHH--CCCCceeEccccHHHHHhCCCC
Q 031899 110 GCQSGKRSMMA------ATDLLN--AGFAGITDIAGGFAAWRQNGLP 148 (151)
Q Consensus 110 ~c~~g~~a~~~------~~~L~~--~G~~~v~~l~GG~~~W~~~g~p 148 (151)
||++|.++..+ ++.|+. .||++|++|+||+.+|.+.+.+
T Consensus 84 yc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~ 130 (153)
T 2vsw_A 84 YDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPG 130 (153)
T ss_dssp ECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGG
T ss_pred EeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChh
Confidence 99999877655 567773 3999999999999999886543
No 48
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.89 E-value=3.7e-23 Score=140.53 Aligned_cols=103 Identities=20% Similarity=0.276 Sum_probs=79.5
Q ss_pred ccccCHHHHHHHHhC-----CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhcc--CCCCeEEEEe
Q 031899 39 PTSVPVRVAHELLQA-----GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGC 111 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~-----~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~c 111 (151)
...|+++++.+++++ +++|||||++ ||..||||||+|+|+..+.. ..+..+...+ ...+.||+||
T Consensus 4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~-------~~~~~l~~~l~~~~~~~vV~yC 75 (152)
T 2j6p_A 4 YTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTE-------EMYEKLAKTLFEEKKELAVFHC 75 (152)
T ss_dssp CEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCH-------HHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhH-------HHHHHHHHHhcccCCCEEEEEc
Confidence 356899999998875 6899999999 99999999999999953311 1222222222 2334577789
Q ss_pred -CCChhHHHHH----HHHHHCCC--CceeEccccHHHHHhCCCCC
Q 031899 112 -QSGKRSMMAA----TDLLNAGF--AGITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 112 -~~g~~a~~~~----~~L~~~G~--~~v~~l~GG~~~W~~~g~pv 149 (151)
.+|.|+..++ ..|++.|| .+|++|+||+.+|.++|.++
T Consensus 76 ~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~ 120 (152)
T 2j6p_A 76 AQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDV 120 (152)
T ss_dssp SSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTT
T ss_pred CCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCC
Confidence 6899988887 77888997 58999999999999988765
No 49
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1e-22 Score=153.42 Aligned_cols=140 Identities=16% Similarity=0.226 Sum_probs=102.4
Q ss_pred cccCccccccccccccccCcccc--Ccccc------cC--------CccccCHHHHHHHHhC-----CCEEEecCChhhH
Q 031899 8 QRCDNIGFISSKILSFCPKASLR--GNLEA------VG--------VPTSVPVRVAHELLQA-----GHRYLDVRTPEEF 66 (151)
Q Consensus 8 ~~~~~v~~l~gg~~~w~~~~~~~--~~~~~------~~--------~~~~i~~~~~~~~~~~-----~~~iiDvR~~~e~ 66 (151)
.++++|++|+|+ .+|+...... +.... .. ....++.+++.+.++. +++|||+|++.+|
T Consensus 137 ~Gh~~V~vLdGg-~aW~~~g~p~~~~~~~~~~p~p~~~~~~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf 215 (327)
T 3utn_X 137 MGHPKVYLLNNF-NQYREFKYPLDSSKVAAFSPYPKSHYESSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRF 215 (327)
T ss_dssp TTCSEEEEESCH-HHHHHTTCCCBCCCCSCSCSSCCCCCCCSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHH
T ss_pred cCCCceeecccH-HHHHHhCCCcccCCccCcCCcCCcccccccccCchheecHHHHhhhhhcccccccceeeccCcccee
Confidence 688999999977 8898754322 11100 00 0124677777777765 3789999999999
Q ss_pred h-----------cCCCCCceeeccccccCC-C-CCCC-HHH----HHHHHh----ccCCCCeEEEEeCCChhHHHHHHHH
Q 031899 67 S-----------AGHATGAINVPYMYRVGS-G-MTKN-LKF----VEEVST----RFRKHDEIIVGCQSGKRSMMAATDL 124 (151)
Q Consensus 67 ~-----------~ghIpgAi~ip~~~~~~~-~-~~~~-~~~----~~~~~~----~~~~~~~iv~~c~~g~~a~~~~~~L 124 (151)
. .||||||+|+|+..++.. + .++. .+. ++..+. .++++++||+||++|.+|+..+..|
T Consensus 216 ~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL 295 (327)
T 3utn_X 216 EGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTAL 295 (327)
T ss_dssp HTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHH
T ss_pred cccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHH
Confidence 6 599999999999887743 2 2222 222 222222 3678899999999999999999999
Q ss_pred HHCCCCceeEccccHHHHHhCCCC
Q 031899 125 LNAGFAGITDIAGGFAAWRQNGLP 148 (151)
Q Consensus 125 ~~~G~~~v~~l~GG~~~W~~~g~p 148 (151)
+.+||+++++|+|+|.+|.....|
T Consensus 296 ~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 296 ELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp HHTTCCSEEEESSHHHHHHHHHCG
T ss_pred HHcCCCCceeCCCcHHHhccccCC
Confidence 999999999999999999875433
No 50
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.89 E-value=5.8e-23 Score=150.57 Aligned_cols=101 Identities=21% Similarity=0.263 Sum_probs=84.5
Q ss_pred CccccCHHHHHHHHhC-CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhc--cCCCCeEEEEeCCC
Q 031899 38 VPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR--FRKHDEIIVGCQSG 114 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~-~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~g 114 (151)
....++++++.+++++ +++|||||++.||..||||||+|+|+..+. ++...+... .+++++||+||.+|
T Consensus 120 ~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~--------~~~~~l~~~l~~~kdk~IVvyC~~G 191 (265)
T 4f67_A 120 AGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFR--------EFPDYVQRNLIDKKDKKIAMFCTGG 191 (265)
T ss_dssp TTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGG--------GHHHHHHHHTGGGTTSCEEEECSSS
T ss_pred CCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHH--------hhHHHHHHhhhhCCCCeEEEEeCCC
Confidence 3468999999999875 499999999999999999999999995321 222222222 36789999999999
Q ss_pred hhHHHHHHHHHHCCCCceeEccccHHHHHhCC
Q 031899 115 KRSMMAATDLLNAGFAGITDIAGGFAAWRQNG 146 (151)
Q Consensus 115 ~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g 146 (151)
.||..++..|++.||++|++|+||+.+|.+..
T Consensus 192 ~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~ 223 (265)
T 4f67_A 192 IRCEKTTAYMKELGFEHVYQLHDGILNYLESI 223 (265)
T ss_dssp HHHHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred hHHHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence 99999999999999999999999999998764
No 51
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.89 E-value=2.9e-23 Score=138.86 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=75.6
Q ss_pred ccCHHHHHH--------HHhC-CCEEEecCChhhHhcCCCCCceeeccccccCC-----CCCCCHHHHHH-----HHhcc
Q 031899 41 SVPVRVAHE--------LLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEE-----VSTRF 101 (151)
Q Consensus 41 ~i~~~~~~~--------~~~~-~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~-----~~~~~ 101 (151)
.|+++++.+ ++.+ +++|||||++.||..||||||+|+|+..+... +....+..+.. .....
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhcc
Confidence 478888887 4433 58999999999999999999999999643210 00000010100 00000
Q ss_pred CCCCeEEEEeCCChhH---------HHHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 102 RKHDEIIVGCQSGKRS---------MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a---------~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
++++||+||++|.++ ..++..|...|| +|++|+||+.+|.++|.|+.
T Consensus 82 -~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~ 137 (142)
T 2ouc_A 82 -FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLC 137 (142)
T ss_dssp -HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGE
T ss_pred -CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhh
Confidence 268899999998774 457888999999 99999999999999998763
No 52
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.89 E-value=1.2e-22 Score=145.09 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=78.7
Q ss_pred CccccCHHHHHHHHhC-------CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhc---c--CCCC
Q 031899 38 VPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR---F--RKHD 105 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~-------~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~---~--~~~~ 105 (151)
....|+++++.++++. +++|||||++.||..||||||+|+|+. +.+...+.. + ++++
T Consensus 55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~-----------~~l~~~l~~~~~~~~~~~k 123 (216)
T 3op3_A 55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQ-----------EELFNFFLKKPIVPLDTQK 123 (216)
T ss_dssp SSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSH-----------HHHHHHHTSSCCCCSSTTS
T ss_pred CCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChH-----------HHHHHHHhhccccccccCC
Confidence 3568999999999875 478999999999999999999999994 334333321 2 2344
Q ss_pred --eEEEEeC-CChhHHHHHHHHHHC----------CCCceeEccccHHHHHhCC
Q 031899 106 --EIIVGCQ-SGKRSMMAATDLLNA----------GFAGITDIAGGFAAWRQNG 146 (151)
Q Consensus 106 --~iv~~c~-~g~~a~~~~~~L~~~----------G~~~v~~l~GG~~~W~~~g 146 (151)
+||+||. +|.|+..++..|+.. ||++|++|+||+.+|.++.
T Consensus 124 ~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~ 177 (216)
T 3op3_A 124 RIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY 177 (216)
T ss_dssp EEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence 4999999 999999999999876 8999999999999998863
No 53
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.87 E-value=5e-23 Score=142.17 Aligned_cols=107 Identities=22% Similarity=0.316 Sum_probs=79.8
Q ss_pred CccccCHHHHHHHHhC--------CCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhcc-------C
Q 031899 38 VPTSVPVRVAHELLQA--------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-------R 102 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~--------~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~-------~ 102 (151)
....|+++++.++++. +++|||||+ .||..||||||+|+|+..+... ...+..+...+ .
T Consensus 29 ~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~-----~~~l~~l~~~~~~~~~~~~ 102 (169)
T 3f4a_A 29 NVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQD-----PEYLRELKHRLLEKQADGR 102 (169)
T ss_dssp SEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHC-----HHHHHHHHHHHHHHHHTSS
T ss_pred CCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcc-----cccHHHHHHHHHhhccccc
Confidence 3468999999998864 388999999 9999999999999999643211 01122222211 1
Q ss_pred CCCeEEEEeCCC-hhHHHHHHHHHH----CC--CCceeEccccHHHHHhCCCCCC
Q 031899 103 KHDEIIVGCQSG-KRSMMAATDLLN----AG--FAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~~~~~~L~~----~G--~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
.+++||+||.+| .|+..++..|.+ .| +.+|++|+||+.+|.+++.|.+
T Consensus 103 ~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~ 157 (169)
T 3f4a_A 103 GALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDE 157 (169)
T ss_dssp SCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCT
T ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcc
Confidence 247999999987 888888876654 36 5799999999999999887764
No 54
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.86 E-value=2.3e-22 Score=136.58 Aligned_cols=105 Identities=20% Similarity=0.183 Sum_probs=78.1
Q ss_pred ccccCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCceeecccccc----C-C-----CCCCCHHHHHHHHhccCCCC
Q 031899 39 PTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRV----G-S-----GMTKNLKFVEEVSTRFRKHD 105 (151)
Q Consensus 39 ~~~i~~~~~~~~~~~---~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~----~-~-----~~~~~~~~~~~~~~~~~~~~ 105 (151)
...|+++++.+++++ +++|||||++.||..||||||+|+|+..+. . . ..++.... ...+..+++++
T Consensus 15 ~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 93 (154)
T 1hzm_A 15 AISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGED-RDRFTRRCGTD 93 (154)
T ss_dssp SSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHH-HHHHHHSTTSS
T ss_pred ccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHH-HHHHhccCCCC
Confidence 456788888877753 689999999999999999999999986532 0 1 12222222 23334567789
Q ss_pred eEEEEeCCChhH-------HHHHHHHHHC---CCCceeEccccHHHHHhC
Q 031899 106 EIIVGCQSGKRS-------MMAATDLLNA---GFAGITDIAGGFAAWRQN 145 (151)
Q Consensus 106 ~iv~~c~~g~~a-------~~~~~~L~~~---G~~~v~~l~GG~~~W~~~ 145 (151)
+||+||.+|.++ ..+++.|+.+ ||+ |++|+||+.+|..+
T Consensus 94 ~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 94 TVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp CEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred eEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 999999998654 4456667654 998 99999999999875
No 55
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.85 E-value=3e-21 Score=131.86 Aligned_cols=104 Identities=19% Similarity=0.255 Sum_probs=77.6
Q ss_pred CCccccCHHHHHHHHhC---------CCEEEecCChhhHhcCCCCCceeecccccc-----CCCCCCCHHHHHHHH----
Q 031899 37 GVPTSVPVRVAHELLQA---------GHRYLDVRTPEEFSAGHATGAINVPYMYRV-----GSGMTKNLKFVEEVS---- 98 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~---------~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~-----~~~~~~~~~~~~~~~---- 98 (151)
.....|+++++.++++. +++|||||++.||..||||||+|+|+..+. ..+... +....
T Consensus 8 ~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~----~~~~~~~~~ 83 (158)
T 3tg1_B 8 ASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKIT----VLDLISCRE 83 (158)
T ss_dssp ---CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCC----HHHHTCCCC
T ss_pred CCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCccc----HHhhcCCHH
Confidence 44578999999998862 489999999999999999999999996432 111000 00000
Q ss_pred --hcc--CCCCeEEEEeCCC---------hhHHHHHHHHHHCCCCceeEccccHHHHHhC
Q 031899 99 --TRF--RKHDEIIVGCQSG---------KRSMMAATDLLNAGFAGITDIAGGFAAWRQN 145 (151)
Q Consensus 99 --~~~--~~~~~iv~~c~~g---------~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~ 145 (151)
..+ .++++||+||.+| .++..++..|+..|| +|++|+|||.+|.++
T Consensus 84 ~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 84 GKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp SSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred HHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 001 2478999999998 458899999999999 799999999999875
No 56
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.85 E-value=1e-21 Score=158.21 Aligned_cols=96 Identities=26% Similarity=0.526 Sum_probs=86.9
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChh
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 116 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~ 116 (151)
.....++++++.++++++++|||||++.||..||||||+|+|+ +.+......++++++||+||.+|.|
T Consensus 486 ~~~~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga~~ip~------------~~l~~~~~~l~~~~~iv~~C~~g~r 553 (588)
T 3ics_A 486 GFVDTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGSINIPL------------DELRDRLEEVPVDKDIYITCQLGMR 553 (588)
T ss_dssp TSCCEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTEEECCH------------HHHTTCGGGSCSSSCEEEECSSSHH
T ss_pred cccceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCCEECCH------------HHHHHHHhhCCCCCeEEEECCCCcH
Confidence 3456789999999988889999999999999999999999999 4555556678899999999999999
Q ss_pred HHHHHHHHHHCCCCceeEccccHHHHHhC
Q 031899 117 SMMAATDLLNAGFAGITDIAGGFAAWRQN 145 (151)
Q Consensus 117 a~~~~~~L~~~G~~~v~~l~GG~~~W~~~ 145 (151)
|..+++.|++.||+ |++|+||+.+|.++
T Consensus 554 s~~a~~~l~~~G~~-v~~l~GG~~~w~~~ 581 (588)
T 3ics_A 554 GYVAARMLMEKGYK-VKNVDGGFKLYGTV 581 (588)
T ss_dssp HHHHHHHHHHTTCC-EEEETTHHHHHHHH
T ss_pred HHHHHHHHHHcCCc-EEEEcchHHHHHhh
Confidence 99999999999998 99999999999875
No 57
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.85 E-value=3.9e-22 Score=159.69 Aligned_cols=95 Identities=27% Similarity=0.458 Sum_probs=82.5
Q ss_pred CccccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhH
Q 031899 38 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 117 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a 117 (151)
....++++++.++ .++++|||||++.||..+|||||+|+|+. .+......++++++||+||++|.||
T Consensus 471 ~~~~i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga~~ip~~------------~l~~~~~~~~~~~~iv~~c~~g~rs 537 (565)
T 3ntd_A 471 DATPIHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGAVNIPVD------------ELRDRMHELPKDKEIIIFSQVGLRG 537 (565)
T ss_dssp SCCEECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTCEECCGG------------GTTTSGGGSCTTSEEEEECSSSHHH
T ss_pred ccceeeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCcEECCHH------------HHHHHHhhcCCcCeEEEEeCCchHH
Confidence 3456777777666 56689999999999999999999999994 3444455688999999999999999
Q ss_pred HHHHHHHHHCCCCceeEccccHHHHHhCC
Q 031899 118 MMAATDLLNAGFAGITDIAGGFAAWRQNG 146 (151)
Q Consensus 118 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g 146 (151)
..+++.|++.|| +|++|+||+.+|.++|
T Consensus 538 ~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 538 NVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 999999999999 9999999999999876
No 58
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.83 E-value=2.8e-22 Score=157.86 Aligned_cols=86 Identities=33% Similarity=0.475 Sum_probs=0.0
Q ss_pred HHHHHh-CCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHH
Q 031899 47 AHELLQ-AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL 125 (151)
Q Consensus 47 ~~~~~~-~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~ 125 (151)
+.++++ ++++|||||++.||..||||||+|+|+. .+......++++++||+||++|.||..++..|+
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~~C~~G~rs~~a~~~L~ 446 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHG------------KLLETDLPFNKNDVIYVHCQSGIRSSIAIGILE 446 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHH------------HHHHHHhhCCCCCeEEEECCCChHHHHHHHHHH
Confidence 444443 3488999999999999999999999994 445555667889999999999999999999999
Q ss_pred HCCCCceeEccccHHHHHh
Q 031899 126 NAGFAGITDIAGGFAAWRQ 144 (151)
Q Consensus 126 ~~G~~~v~~l~GG~~~W~~ 144 (151)
+.||++|++|+||+.+|.+
T Consensus 447 ~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 447 HKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp -------------------
T ss_pred HcCCCCEEEecChHHHHhh
Confidence 9999999999999999975
No 59
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.82 E-value=1.6e-20 Score=135.32 Aligned_cols=92 Identities=17% Similarity=0.123 Sum_probs=73.1
Q ss_pred CCCEEEecCChhhHhcCCCCCceeeccc--cccCC---CCCCCHHHHHHHHhccCCCCeEEEEeCCCh-hHHHHHHHHHH
Q 031899 53 AGHRYLDVRTPEEFSAGHATGAINVPYM--YRVGS---GMTKNLKFVEEVSTRFRKHDEIIVGCQSGK-RSMMAATDLLN 126 (151)
Q Consensus 53 ~~~~iiDvR~~~e~~~ghIpgAi~ip~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~-~a~~~~~~L~~ 126 (151)
++++|||+|++.||..||||||+|+|+. .+... +++++.+.+......++.+++||+||++|. +|.++++.|+
T Consensus 5 ~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~~~L~- 83 (230)
T 2eg4_A 5 EDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLG- 83 (230)
T ss_dssp TTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHHHHHH-
T ss_pred CCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHHHH-
Confidence 4589999999999999999999999996 33211 111122445666666666899999999988 9999999999
Q ss_pred CCCCceeEccccHHHHHhCCCCCC
Q 031899 127 AGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 127 ~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
+||++|++|+|| |.+ +|++
T Consensus 84 ~G~~~v~~l~GG---W~~--~p~~ 102 (230)
T 2eg4_A 84 LGGLEVQLWTEG---WEP--YATE 102 (230)
T ss_dssp HTTCCEEEECSS---CGG--GCCB
T ss_pred cCCceEEEeCCC---Ccc--Cccc
Confidence 999999999999 877 6763
No 60
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.5e-19 Score=136.27 Aligned_cols=112 Identities=14% Similarity=0.098 Sum_probs=92.5
Q ss_pred CccccCHHHHHHHHhCC----CEEEecC--------C-hhhH-hcCCCCCceeeccccccC-----CCCCCCHHHHHHHH
Q 031899 38 VPTSVPVRVAHELLQAG----HRYLDVR--------T-PEEF-SAGHATGAINVPYMYRVG-----SGMTKNLKFVEEVS 98 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~~----~~iiDvR--------~-~~e~-~~ghIpgAi~ip~~~~~~-----~~~~~~~~~~~~~~ 98 (151)
....|||+++.++++++ +++||++ + ..|| .+||||||++++++.+.. ..++++++.+...+
T Consensus 26 ~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l 105 (327)
T 3utn_X 26 LFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAM 105 (327)
T ss_dssp SCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHH
T ss_pred cccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHH
Confidence 33579999999988632 7889986 2 3566 689999999999875432 35678888888887
Q ss_pred hc--cCCCCeEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 99 TR--FRKHDEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 99 ~~--~~~~~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
.. +.++++||+|++.+ ..|++++++|+.+|+++|++|+|| .+|.++|+|++
T Consensus 106 ~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~ 159 (327)
T 3utn_X 106 SNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLD 159 (327)
T ss_dssp HHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCB
T ss_pred HHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcc
Confidence 76 57899999999866 568899999999999999999977 89999999985
No 61
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.80 E-value=1.6e-19 Score=123.14 Aligned_cols=111 Identities=8% Similarity=0.055 Sum_probs=73.7
Q ss_pred CccccCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCceeeccccccCCCCC-----CCHHHHHHHHhccCCCCeEEE
Q 031899 38 VPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMT-----KNLKFVEEVSTRFRKHDEIIV 109 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~---~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~iv~ 109 (151)
....|+++++.+++++ +++|||||++.||..||||||+|+|...+...... ..++.....+....+...||+
T Consensus 18 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~VVv 97 (157)
T 2gwf_A 18 GSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 97 (157)
T ss_dssp -CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEEEE
T ss_pred CCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEEEE
Confidence 3467899999988763 58999999999999999999999998643211000 001111222233334556899
Q ss_pred EeCCChh----HHHHHHHHH----HC----CCC-ceeEccccHHHHHhCCCCC
Q 031899 110 GCQSGKR----SMMAATDLL----NA----GFA-GITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 110 ~c~~g~~----a~~~~~~L~----~~----G~~-~v~~l~GG~~~W~~~g~pv 149 (151)
||.++.+ +..+++.|. +. |+. +|++|+|||.+|.+. +|.
T Consensus 98 y~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 149 (157)
T 2gwf_A 98 LDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 149 (157)
T ss_dssp ECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGG
T ss_pred EcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chh
Confidence 9987643 334555554 32 454 399999999999984 664
No 62
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.80 E-value=1.7e-19 Score=122.97 Aligned_cols=110 Identities=8% Similarity=0.067 Sum_probs=74.7
Q ss_pred CCccccCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCceeeccccccCCC-------CCCCHHHHHHHHhccCCCCe
Q 031899 37 GVPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSG-------MTKNLKFVEEVSTRFRKHDE 106 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~---~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 106 (151)
.....|+++++.++++. +++|||||++.||..||||||+|+|...+.... .++. .....+........
T Consensus 12 ~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~--~~~~~~~~~~~~~~ 89 (157)
T 1whb_A 12 KEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPD--DSKDTWKKRGNVEY 89 (157)
T ss_dssp CCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCT--THHHHHHGGGTSSE
T ss_pred ccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCCh--HHHHHHHhcCCCCE
Confidence 34567999999988864 578999999999999999999999986432110 0111 11122222233456
Q ss_pred EEEEeCCChh----HHHHHHHHHH----C----CCC-ceeEccccHHHHHhCCCCC
Q 031899 107 IIVGCQSGKR----SMMAATDLLN----A----GFA-GITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 107 iv~~c~~g~~----a~~~~~~L~~----~----G~~-~v~~l~GG~~~W~~~g~pv 149 (151)
||+||..+.+ +..+++.|.+ . ||. +|++|+|||.+|.+. +|+
T Consensus 90 VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 144 (157)
T 1whb_A 90 VVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 144 (157)
T ss_dssp EEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGG
T ss_pred EEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-Chh
Confidence 9999987643 3455666652 2 454 499999999999985 664
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.79 E-value=1.1e-19 Score=143.18 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=84.7
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChh
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 116 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~ 116 (151)
+.+..++++++.++++++ +|||+|++.+|..||||||+|+|+.. .+........+++++||+||+.+.
T Consensus 270 ~~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA~~i~~~~----------~~~~~~~~l~~~~~~vvvy~~~~~- 337 (474)
T 3tp9_A 270 PERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGSLNIPWNK----------SFVTWAGWLLPADRPIHLLAADAI- 337 (474)
T ss_dssp CEECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTCEECCSST----------THHHHHHHHCCSSSCEEEECCTTT-
T ss_pred CCCceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCeEEECcch----------HHHHHHHhcCCCCCeEEEEECCCc-
Confidence 345689999999998887 99999999999999999999999841 233333333477899999999876
Q ss_pred HHHHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 117 SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 117 a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
+.++++.|+.+||++|+++.+|+.+|..+|.|++
T Consensus 338 ~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~ 371 (474)
T 3tp9_A 338 APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVA 371 (474)
T ss_dssp HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEE
T ss_pred HHHHHHHHHHcCCcceEEecCcHHHHHhcccccc
Confidence 5669999999999999986679999999887764
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.55 E-value=1.1e-14 Score=114.60 Aligned_cols=80 Identities=21% Similarity=0.295 Sum_probs=62.0
Q ss_pred CCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCce
Q 031899 53 AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGI 132 (151)
Q Consensus 53 ~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v 132 (151)
++++|||+|++.+|..||||||+|+|+. ..+..+....++++++||+||+ +.++.++++.|+..||++|
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~----------~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~v 363 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYD----------KNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYDDI 363 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSS----------TTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCCCE
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCcc----------HHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhcccc
Confidence 5689999999999999999999999984 1233333334678999999999 5688999999999999999
Q ss_pred eE-ccccHHHHH
Q 031899 133 TD-IAGGFAAWR 143 (151)
Q Consensus 133 ~~-l~GG~~~W~ 143 (151)
+. ++|+...|.
T Consensus 364 ~~~l~g~~~~~~ 375 (466)
T 3r2u_A 364 AGYQLPQSKIQT 375 (466)
T ss_dssp EEEECCC-----
T ss_pred cccccCcccccH
Confidence 97 677654443
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.38 E-value=1.2e-06 Score=58.94 Aligned_cols=84 Identities=18% Similarity=0.193 Sum_probs=54.9
Q ss_pred cCHHHHHHHHhCC-CEEEecCChhh------------HhcC-CCCCceeeccccccCCCCCCCHHHHHHHHhcc-CCCCe
Q 031899 42 VPVRVAHELLQAG-HRYLDVRTPEE------------FSAG-HATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDE 106 (151)
Q Consensus 42 i~~~~~~~~~~~~-~~iiDvR~~~e------------~~~g-hIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 106 (151)
++++++..+.+.+ ..|||+|++.| +... +|+|.+|+|+... ....+.+..+...+ ..+.+
T Consensus 30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~-----~~~~~~~~~~~~~l~~~~~p 104 (156)
T 2f46_A 30 LTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR-----DIQKHDVETFRQLIGQAEYP 104 (156)
T ss_dssp CCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT-----TCCHHHHHHHHHHHHTSCSS
T ss_pred CCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC-----CCCHHHHHHHHHHHHhCCCC
Confidence 4667777776666 68999997755 3344 5999999998521 12234444444443 34789
Q ss_pred EEEEeCCChhHHHHHHH-HHHCCCC
Q 031899 107 IIVGCQSGKRSMMAATD-LLNAGFA 130 (151)
Q Consensus 107 iv~~c~~g~~a~~~~~~-L~~~G~~ 130 (151)
|+++|.+|.|+..++.. |...|..
T Consensus 105 VlvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 105 VLAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp EEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHcCCC
Confidence 99999999887754433 2445653
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=95.91 E-value=0.02 Score=37.32 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=48.8
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhHhcCCCCCc--eeeccccccCCCCCCCHHHHHHHHhc----cCCCCeEEEEeCCCh
Q 031899 43 PVRVAHELLQAG-HRYLDVRTPEEFSAGHATGA--INVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSGK 115 (151)
Q Consensus 43 ~~~~~~~~~~~~-~~iiDvR~~~e~~~ghIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iv~~c~~g~ 115 (151)
+++++..+.+.+ ..|||+|+..+......+|- +++|+.+. ..++.+.+...... +..+.+|+|+|..|.
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~ 99 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDF----CPPAPDQIDRFVQIVDEANARGEAVGVHCALGF 99 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTT----SCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCC----CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 466777777777 67999998766444444443 34555322 22233333433332 345789999999984
Q ss_pred -hHH-HHHH-HHHHCCCC
Q 031899 116 -RSM-MAAT-DLLNAGFA 130 (151)
Q Consensus 116 -~a~-~~~~-~L~~~G~~ 130 (151)
|+. .++. .+...|++
T Consensus 100 ~Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 100 GRTGTMLACYLVKERGLA 117 (150)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 665 3333 34446663
No 67
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=95.30 E-value=0.045 Score=35.49 Aligned_cols=83 Identities=13% Similarity=0.107 Sum_probs=46.1
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhHhcCCCCC--ceeeccccccCCCCCCCHHHHHHHHhc----cCCCCeEEEEeCCC-
Q 031899 43 PVRVAHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSG- 114 (151)
Q Consensus 43 ~~~~~~~~~~~~-~~iiDvR~~~e~~~ghIpg--Ai~ip~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iv~~c~~g- 114 (151)
+.+....+.+.+ ..|||+|+..++....+++ -.++|+.+. ..++.+.+...... +..+.+|+|+|..|
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~----~~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~ 100 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDF----CPPAPDQIDRFVQIVDEANARGEAVGVHCALGF 100 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTT----CCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCC----CCCCHHHHHHHHHHHHHHHhCCCcEEEECCCCC
Confidence 456666666667 6799999876544333332 355665321 12223333333332 34578999999988
Q ss_pred hhHHH-HHHHHHHC-CC
Q 031899 115 KRSMM-AATDLLNA-GF 129 (151)
Q Consensus 115 ~~a~~-~~~~L~~~-G~ 129 (151)
.|+.. ++..|... |.
T Consensus 101 ~Rsg~~~~~~l~~~~~~ 117 (151)
T 2img_A 101 GRTGTMLACYLVKERGL 117 (151)
T ss_dssp SHHHHHHHHHHHHHHCC
T ss_pred ChHHHHHHHHHHHHhCc
Confidence 35543 33444333 65
No 68
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=95.06 E-value=0.057 Score=35.27 Aligned_cols=87 Identities=8% Similarity=-0.027 Sum_probs=45.7
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhHhc-------CCCCCceeeccccccCCCCCCCHHHHHHHHhcc-C-CCCeEEEEeC
Q 031899 43 PVRVAHELLQAG-HRYLDVRTPEEFSA-------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-R-KHDEIIVGCQ 112 (151)
Q Consensus 43 ~~~~~~~~~~~~-~~iiDvR~~~e~~~-------ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~iv~~c~ 112 (151)
++.++..+.+.+ ..|||+|+..+... ..| .-+++|..+...+......+.+......+ . .+.+|+++|.
T Consensus 22 ~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi-~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~ 100 (151)
T 1xri_A 22 DSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGI-RLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCK 100 (151)
T ss_dssp CHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTC-EEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECS
T ss_pred CccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCC-eEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECC
Confidence 445555555556 68999998654321 111 13456653211111111223444444432 2 4679999999
Q ss_pred CCh-hHHH-HHHHHHHCCCC
Q 031899 113 SGK-RSMM-AATDLLNAGFA 130 (151)
Q Consensus 113 ~g~-~a~~-~~~~L~~~G~~ 130 (151)
.|. |+.. ++..|...|..
T Consensus 101 aG~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 101 RGKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp SSSSHHHHHHHHHHHHTTBC
T ss_pred CCCCHHHHHHHHHHHHhCCC
Confidence 884 6554 44455666763
No 69
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=94.57 E-value=0.0046 Score=41.97 Aligned_cols=24 Identities=17% Similarity=0.361 Sum_probs=21.2
Q ss_pred CEEEecCChhhHhcCCCCCceeeccccc
Q 031899 55 HRYLDVRTPEEFSAGHATGAINVPYMYR 82 (151)
Q Consensus 55 ~~iiDvR~~~e~~~ghIpgAi~ip~~~~ 82 (151)
.++||||.+.||. |||+|+|...+
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~l 145 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRV 145 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHH
Confidence 3899999999999 99999998643
No 70
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=94.04 E-value=0.19 Score=34.77 Aligned_cols=83 Identities=20% Similarity=0.196 Sum_probs=44.2
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhHhcCCCC---------C--ceeeccccccCCCCCCCHHHHHHHHhc----cCCCCe
Q 031899 43 PVRVAHELLQAG-HRYLDVRTPEEFSAGHAT---------G--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDE 106 (151)
Q Consensus 43 ~~~~~~~~~~~~-~~iiDvR~~~e~~~ghIp---------g--Ai~ip~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 106 (151)
..+++..+.+.+ ..|||+|+..|...-.++ | -+++|+.+. ..++.+.+...... +..+.+
T Consensus 60 ~~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~----~~p~~~~~~~~~~~i~~~~~~~~~ 135 (212)
T 1fpz_A 60 VQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG----GTPDIASCCEIMEELTTCLKNYRK 135 (212)
T ss_dssp HHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT----CCCCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCC----CCCCHHHHHHHHHHHHHHHhCCCC
Confidence 455566666656 689999998765432211 1 234454221 11222333333322 335789
Q ss_pred EEEEeCCC-hhHH-HHHHHHHH--CCC
Q 031899 107 IIVGCQSG-KRSM-MAATDLLN--AGF 129 (151)
Q Consensus 107 iv~~c~~g-~~a~-~~~~~L~~--~G~ 129 (151)
|+|+|..| .|+. .++..|.. .|.
T Consensus 136 VlVHC~aG~gRTg~~~a~~L~~~~~g~ 162 (212)
T 1fpz_A 136 TLIHSYGGLGRSCLVAACLLLYLSDTI 162 (212)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHCSSC
T ss_pred EEEECCCCCCHHHHHHHHHHHHhccCC
Confidence 99999988 3544 34445544 365
No 71
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=93.88 E-value=0.13 Score=33.33 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=40.6
Q ss_pred HHHHHhCC-CEEEecCChhhHhcCCCCC---ceeeccccccCCCCCCC-HHHHHHHHhccCCCCeEEEEeCCC-hhHHH-
Q 031899 47 AHELLQAG-HRYLDVRTPEEFSAGHATG---AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM- 119 (151)
Q Consensus 47 ~~~~~~~~-~~iiDvR~~~e~~~ghIpg---Ai~ip~~~~~~~~~~~~-~~~~~~~~~~~~~~~~iv~~c~~g-~~a~~- 119 (151)
+..+.+.+ ..|||+|+..+ ...|+ -.++|..+......... .+.++.+......+.+|+++|..| .||..
T Consensus 22 ~~~L~~~gi~~Vi~l~~~~~---~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~ 98 (145)
T 2nt2_A 22 LEDLQNRGVRYILNVTREID---NFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSAST 98 (145)
T ss_dssp HHHHHHTTEEEEEECCSSSC---CSCBTTBEEEECCCCSSTTCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHHHHCCCCEEEEeCCCCc---cCCCCCcEEEEEEEeCCCCCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 44444566 57999997533 12232 24566543221111110 011111112233578999999998 67653
Q ss_pred -HHHHHHHCCC
Q 031899 120 -AATDLLNAGF 129 (151)
Q Consensus 120 -~~~~L~~~G~ 129 (151)
++..+...|+
T Consensus 99 v~ayLm~~~~~ 109 (145)
T 2nt2_A 99 VIAYAMKEYGW 109 (145)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhCC
Confidence 3455566665
No 72
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=93.76 E-value=0.47 Score=34.84 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=28.5
Q ss_pred CccccCHHHHHHHHhCC-CEEEecCChhhHhcC----CCCCc--eeeccc
Q 031899 38 VPTSVPVRVAHELLQAG-HRYLDVRTPEEFSAG----HATGA--INVPYM 80 (151)
Q Consensus 38 ~~~~i~~~~~~~~~~~~-~~iiDvR~~~e~~~g----hIpgA--i~ip~~ 80 (151)
.+..++++++..+.+-+ -.|||.|++.|.... ..+|. +++|+.
T Consensus 52 ~l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~ 101 (296)
T 1ywf_A 52 ELSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFP 101 (296)
T ss_dssp CCTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCC
T ss_pred CcccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCc
Confidence 34457888888877667 679999998885422 23453 456653
No 73
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=93.53 E-value=0.11 Score=34.44 Aligned_cols=79 Identities=23% Similarity=0.333 Sum_probs=40.9
Q ss_pred HHHHHhCC-CEEEecCChhhHhcCCCCC--ceeeccccccCCCCCCCHHHHHHHHh----ccCCCCeEEEEeCCC-hhHH
Q 031899 47 AHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 47 ~~~~~~~~-~~iiDvR~~~e~~~ghIpg--Ai~ip~~~~~~~~~~~~~~~~~~~~~----~~~~~~~iv~~c~~g-~~a~ 118 (151)
...+.+.+ ..|||+|+..+.. ...| -+++|..+.... ...+.+..... .+..+.+|+++|..| .|+.
T Consensus 30 ~~~L~~~gI~~Vi~l~~~~~~~--~~~~~~~~~ip~~D~~~~---~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 104 (164)
T 2hcm_A 30 TELLVRAGITLCVNVSRQQPGP--RAPGVAELRVPVFDDPAE---DLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSA 104 (164)
T ss_dssp HHHHHHTTEEEEEECSSSCCCC--CCTTCEEEECCCCSCTTS---CCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHH
T ss_pred HHHHHHCCCeEEEEcCCCCCCC--CCCCCEEEEEeCcCCCCc---hHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHH
Confidence 33444556 5799999865321 1122 244555322111 11112222222 234578999999998 6766
Q ss_pred H--HHHHHHHCCCC
Q 031899 119 M--AATDLLNAGFA 130 (151)
Q Consensus 119 ~--~~~~L~~~G~~ 130 (151)
. ++..+...|+.
T Consensus 105 ~~~~ayLm~~~~~~ 118 (164)
T 2hcm_A 105 AVCTAYLMRHRGHS 118 (164)
T ss_dssp HHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhCCC
Confidence 3 34556667763
No 74
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=93.16 E-value=0.2 Score=33.04 Aligned_cols=81 Identities=11% Similarity=0.109 Sum_probs=39.7
Q ss_pred HHHHHhCC-CEEEecCChhhHhcCCCCC--ceeeccccccCCCCCCC-HHHHHHHHhccCCCCeEEEEeCCC-hhHHH--
Q 031899 47 AHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM-- 119 (151)
Q Consensus 47 ~~~~~~~~-~~iiDvR~~~e~~~ghIpg--Ai~ip~~~~~~~~~~~~-~~~~~~~~~~~~~~~~iv~~c~~g-~~a~~-- 119 (151)
+..+.+.+ ..|||+|+..+. ...| -+++|+.+......... .+.++.+......+.+|+++|..| .|+..
T Consensus 26 ~~~L~~~gI~~Vi~l~~~~~~---~~~~i~~~~ipi~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~ 102 (160)
T 1yz4_A 26 LDQLGRNKITHIISIHESPQP---LLQDITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIV 102 (160)
T ss_dssp HHHHHHTTCCEEEEECSSCCC---CCTTCEEEEECCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHH
T ss_pred HHHHHHCCCeEEEEccCCCCC---ccCCCeEEEEECCCCCCccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHH
Confidence 33344456 679999975431 1122 24566532221111111 111111111223578999999998 67653
Q ss_pred HHHHHHHCCCC
Q 031899 120 AATDLLNAGFA 130 (151)
Q Consensus 120 ~~~~L~~~G~~ 130 (151)
++..+...|.+
T Consensus 103 ~aylm~~~~~~ 113 (160)
T 1yz4_A 103 TAYVMTVTGLG 113 (160)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHcCCC
Confidence 34444566763
No 75
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=92.92 E-value=0.43 Score=31.01 Aligned_cols=85 Identities=13% Similarity=0.048 Sum_probs=42.2
Q ss_pred HHHHHHhCC-CEEEecCChhhHhc--CCCC-C--ceeeccccccCCCCCCC-HHHHHHHHhccCCCCeEEEEeCCC-hhH
Q 031899 46 VAHELLQAG-HRYLDVRTPEEFSA--GHAT-G--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRS 117 (151)
Q Consensus 46 ~~~~~~~~~-~~iiDvR~~~e~~~--ghIp-g--Ai~ip~~~~~~~~~~~~-~~~~~~~~~~~~~~~~iv~~c~~g-~~a 117 (151)
++..+.+.+ ..|||+|+..|... -..+ | -+++|..+......... ....+.+...+..+.+|+++|..| .|+
T Consensus 25 d~~~L~~~gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS 104 (154)
T 2r0b_A 25 KLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRS 104 (154)
T ss_dssp GHHHHHHTTCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred cHHHHHHcCCeEEEEeCCccccccCCCCCcCceeEEEEECCCCCcccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChH
Confidence 344455566 67999998766321 1122 2 24556533221111110 011111111223578999999998 576
Q ss_pred HH-H-HHHHHHCCCC
Q 031899 118 MM-A-ATDLLNAGFA 130 (151)
Q Consensus 118 ~~-~-~~~L~~~G~~ 130 (151)
.. + +..+...|.+
T Consensus 105 ~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 105 AAFVIAYIMETFGMK 119 (154)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCC
Confidence 64 3 3444556753
No 76
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=92.92 E-value=0.48 Score=30.47 Aligned_cols=81 Identities=17% Similarity=0.162 Sum_probs=39.2
Q ss_pred HHHHhCC-CEEEecCChhhH-hcCCCCCceeeccccccCCCCCCCHH-HHHHHHhccCCCCeEEEEeCCC-hhHH-HH-H
Q 031899 48 HELLQAG-HRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLK-FVEEVSTRFRKHDEIIVGCQSG-KRSM-MA-A 121 (151)
Q Consensus 48 ~~~~~~~-~~iiDvR~~~e~-~~ghIpgAi~ip~~~~~~~~~~~~~~-~~~~~~~~~~~~~~iv~~c~~g-~~a~-~~-~ 121 (151)
..+.+.+ ..||++++.... ....+ .-.++|+.+.........-. .++.+......+.+|+|+|..| .||. .+ +
T Consensus 23 ~~L~~~gI~~Vi~l~~~~~~~~~~~~-~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~a 101 (144)
T 3ezz_A 23 DMLDALGITALLNVSSDCPNHFEGHY-QYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLA 101 (144)
T ss_dssp HHHHHTTCCEEEECSSSCCCTTTTTS-EEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHH
T ss_pred HHHHHCCCeEEEEccCCCCccCCCCc-eEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHH
Confidence 3444556 679999974221 01111 12456664332222211111 1222222234567999999988 3654 33 3
Q ss_pred HHHHHCCC
Q 031899 122 TDLLNAGF 129 (151)
Q Consensus 122 ~~L~~~G~ 129 (151)
..+...|+
T Consensus 102 ylm~~~~~ 109 (144)
T 3ezz_A 102 YLMMKKRV 109 (144)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 44455666
No 77
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=92.72 E-value=0.24 Score=32.86 Aligned_cols=80 Identities=18% Similarity=0.234 Sum_probs=39.4
Q ss_pred HHHHHhCC-CEEEecCChhhHhcCCCCC--ceeeccccccCCCCCCC-HHHHHHHHhccCCCCeEEEEeCCC-hhHHH--
Q 031899 47 AHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM-- 119 (151)
Q Consensus 47 ~~~~~~~~-~~iiDvR~~~e~~~ghIpg--Ai~ip~~~~~~~~~~~~-~~~~~~~~~~~~~~~~iv~~c~~g-~~a~~-- 119 (151)
...+.+.+ ..|||+|+..+-. ..| -+++|..+......... .+.++.+......+.+|+|+|..| .|+..
T Consensus 25 ~~~L~~~gI~~Vi~l~~~~~~~---~~~i~~~~ip~~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~ 101 (165)
T 1wrm_A 25 AEQLSKNKVTHILSVHDSARPM---LEGVKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLV 101 (165)
T ss_dssp HHHHHHTTEEEEEECSTTCCCC---STTCEEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHH
T ss_pred HHHHHHCCCcEEEEecCCCCCC---CCCCeEEEEECCCCCCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHH
Confidence 33344456 5799999764311 122 24555532211111110 111111111234578999999998 57664
Q ss_pred HHHHHHHCCC
Q 031899 120 AATDLLNAGF 129 (151)
Q Consensus 120 ~~~~L~~~G~ 129 (151)
++..+...|+
T Consensus 102 ~ayLm~~~~~ 111 (165)
T 1wrm_A 102 IAYIMTVTDF 111 (165)
T ss_dssp HHHHHHTSSC
T ss_pred HHHHHHHcCC
Confidence 3444555565
No 78
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=92.38 E-value=0.29 Score=33.11 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=33.0
Q ss_pred HHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 94 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+..++....++.+++++|++-..+..++..|+..|+ .+..+.|++.
T Consensus 36 L~~ll~~~~~~~k~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 36 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 81 (185)
T ss_dssp HHHHHHHC-CCSCEEEEESCHHHHHHHHHHHHHTTC-CEEEEC----
T ss_pred HHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEeCCCC
Confidence 344444444677899999998889999999999998 5888888874
No 79
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=92.03 E-value=0.26 Score=32.03 Aligned_cols=82 Identities=12% Similarity=0.089 Sum_probs=42.5
Q ss_pred HHHHH-HhCC-CEEEecCChhhHhcCCC---------CCceeeccccccCCCCCCCHHHHHHHHhc----cCCCCeEEEE
Q 031899 46 VAHEL-LQAG-HRYLDVRTPEEFSAGHA---------TGAINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVG 110 (151)
Q Consensus 46 ~~~~~-~~~~-~~iiDvR~~~e~~~ghI---------pgAi~ip~~~~~~~~~~~~~~~~~~~~~~----~~~~~~iv~~ 110 (151)
+..++ .+.+ ..|||+|+..|...... -.-+++|..+.. ..+..+.+...... ...+.+|+|+
T Consensus 19 ~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~vlVH 95 (157)
T 3rgo_A 19 MTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMT---GVPTLANLHKGVQFALKYQALGQCVYVH 95 (157)
T ss_dssp GHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTT---SSCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred chHHHHHHcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCC---CCChHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 34444 3456 57999998765432110 113455653221 12222333333322 3456899999
Q ss_pred eCCCh-hHHHH--HHHHHHCCCC
Q 031899 111 CQSGK-RSMMA--ATDLLNAGFA 130 (151)
Q Consensus 111 c~~g~-~a~~~--~~~L~~~G~~ 130 (151)
|..|. |+..+ +..+...|.+
T Consensus 96 C~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 96 CKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp SSSSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCCCChHHHHHHHHHHHHcCCC
Confidence 99985 66643 3444556663
No 80
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=91.97 E-value=0.41 Score=32.51 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=39.9
Q ss_pred HHHHhCC-CEEEecCChhhHhcCCCCCc--eeeccccccCCCCCCCHHHHHHHHh----ccCCCCeEEEEeCCC-hhHHH
Q 031899 48 HELLQAG-HRYLDVRTPEEFSAGHATGA--INVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSG-KRSMM 119 (151)
Q Consensus 48 ~~~~~~~-~~iiDvR~~~e~~~ghIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~----~~~~~~~iv~~c~~g-~~a~~ 119 (151)
..+.+.+ ..||++|...+ ....+|- +++|..+....... +.+..... .+..+.+|+|+|..| .||..
T Consensus 39 ~~L~~~gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~~~~~---~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~ 113 (188)
T 2esb_A 39 LMLSSNQITMVINVSVEVV--NTLYEDIQYMQVPVADSPNSRLC---DFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAA 113 (188)
T ss_dssp HHHHHTTCCEEEECCSSCC--CCCCTTCEEEECCCCSCTTSCGG---GGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHH
T ss_pred HHHHHCCCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCCccHH---HHHHHHHHHHHHHHHcCCEEEEECCCCCchHHH
Confidence 3344456 67999997432 1112332 34555322111111 12222222 234578999999998 67653
Q ss_pred --HHHHHHHCCCC
Q 031899 120 --AATDLLNAGFA 130 (151)
Q Consensus 120 --~~~~L~~~G~~ 130 (151)
++..+...|.+
T Consensus 114 vv~ayLm~~~~~s 126 (188)
T 2esb_A 114 LCLAYLMKYHAMS 126 (188)
T ss_dssp HHHHHHHHHSCCC
T ss_pred HHHHHHHHHcCCC
Confidence 34555666763
No 81
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=91.59 E-value=0.48 Score=32.28 Aligned_cols=81 Identities=17% Similarity=0.149 Sum_probs=39.9
Q ss_pred HHHHHhCC-CEEEecCChhhHhcCCCCCc--eeeccccccCCCCCCC-HHHHHHHHhccCCCCeEEEEeCCC-hhHHH--
Q 031899 47 AHELLQAG-HRYLDVRTPEEFSAGHATGA--INVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM-- 119 (151)
Q Consensus 47 ~~~~~~~~-~~iiDvR~~~e~~~ghIpgA--i~ip~~~~~~~~~~~~-~~~~~~~~~~~~~~~~iv~~c~~g-~~a~~-- 119 (151)
...+.+.+ ..|||+|+..+ ....+|- +++|+.+......... ...++.+......+.+|+|+|..| .|+..
T Consensus 44 ~~~L~~~gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv 121 (190)
T 2wgp_A 44 RHLLQARGITCIVNATIEIP--NFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLC 121 (190)
T ss_dssp HHHHHHTTCCEEEECCSSSC--CCCCTTSEEEECCCCSSTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHH
T ss_pred HHHHHHCCCcEEEEecCCCC--CCCCCCCEEEEEEcccCCCCCHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHH
Confidence 33444556 67999997532 1122332 3455532211111110 111111111223578999999988 67653
Q ss_pred HHHHHHHCCC
Q 031899 120 AATDLLNAGF 129 (151)
Q Consensus 120 ~~~~L~~~G~ 129 (151)
++..+...|+
T Consensus 122 ~ayLm~~~~~ 131 (190)
T 2wgp_A 122 IAYLMKFHNV 131 (190)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHcCC
Confidence 3455566665
No 82
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=90.50 E-value=2.4 Score=27.47 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=18.3
Q ss_pred CCCeEEEEeCCC-hhHH-HHHHHHHHC-CCC
Q 031899 103 KHDEIIVGCQSG-KRSM-MAATDLLNA-GFA 130 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~-~~~~~L~~~-G~~ 130 (151)
++.+|+|+|..| .|+. .++..|... |.+
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 378999999988 3544 444555554 653
No 83
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=90.49 E-value=0.37 Score=31.19 Aligned_cols=28 Identities=21% Similarity=0.367 Sum_probs=19.5
Q ss_pred CCCCeEEEEeCCC-hhHHHH--HHHHHHCCC
Q 031899 102 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGF 129 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~~~--~~~L~~~G~ 129 (151)
..+.+|+++|..| .|+..+ +..+...|.
T Consensus 81 ~~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 81 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred HcCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 3578999999998 676643 344555676
No 84
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=90.27 E-value=0.87 Score=29.25 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=38.1
Q ss_pred HHHHhCC-CEEEecCChhhHhcCCCCC---ceeeccccccCCCCCCCHHHHHHHHh----ccCCCCeEEEEeCCC-hhHH
Q 031899 48 HELLQAG-HRYLDVRTPEEFSAGHATG---AINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 48 ~~~~~~~-~~iiDvR~~~e~~~ghIpg---Ai~ip~~~~~~~~~~~~~~~~~~~~~----~~~~~~~iv~~c~~g-~~a~ 118 (151)
..+.+.+ ..||+++...+ ...+. -.++|+.+....... +.+..... ....+.+|+|+|..| .||.
T Consensus 23 ~~L~~~gI~~Vl~l~~~~~---~~~~~~~~~~~ipi~D~~~~~~~---~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~ 96 (144)
T 3s4e_A 23 DTLKKNKVTHILNVAYGVE---NAFLSDFTYKSISILDLPETNIL---SYFPECFEFIEEAKRKDGVVLVHSNAGVSRAA 96 (144)
T ss_dssp HHHHHTTCCEEEECSSSCC---CCCTTTSEEEECCCCCCTTSCGG---GGHHHHHHHHHHHHHTTCCEEEECSSSSSHHH
T ss_pred HHHHHcCCCEEEEccCCCC---CCCCCCCEEEEEeccCCCCCchH---HHHHHHHHHHHHHHHcCCeEEEEcCCCCchHH
Confidence 3344556 67999986322 11222 235565432221111 22222222 234577999999988 3654
Q ss_pred -H-HHHHHHHCCC
Q 031899 119 -M-AATDLLNAGF 129 (151)
Q Consensus 119 -~-~~~~L~~~G~ 129 (151)
. ++..+...|+
T Consensus 97 ~~v~ayLm~~~~~ 109 (144)
T 3s4e_A 97 AIVIGFLMNSEQT 109 (144)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCC
Confidence 3 3444455666
No 85
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=90.09 E-value=1.6 Score=29.51 Aligned_cols=86 Identities=20% Similarity=0.264 Sum_probs=43.8
Q ss_pred ccccCHHHHHHHHh-CC-CEEEecCChhh----HhcCCCCCceeeccccccCCCCCCCHHHHHHHHhc------cCCCCe
Q 031899 39 PTSVPVRVAHELLQ-AG-HRYLDVRTPEE----FSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR------FRKHDE 106 (151)
Q Consensus 39 ~~~i~~~~~~~~~~-~~-~~iiDvR~~~e----~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 106 (151)
|...+.++..+++. .+ ..||+++++.+ +..-+| .-+++|+. ++..+..+.+..+... ..++.+
T Consensus 45 P~~~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i-~~~~~pi~----d~~~~~~~~~~~~~~~i~~~~~~~~~~~ 119 (189)
T 3rz2_A 45 PTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFD----DGAPPSNQIVDDWLSLVKIKFREEPGCC 119 (189)
T ss_dssp CCTTTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSC-EEEECCCC----SSSCCCSHHHHHHHHHHHHHHHHSTTCE
T ss_pred CCcccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCc-EEEEecCC----CCCCCCHHHHHHHHHHHHHHHHhCCCCc
Confidence 33455555555554 45 57999997532 222221 12234432 1222222333333332 256789
Q ss_pred EEEEeCCC-hhHH-HHHHHHHHCCC
Q 031899 107 IIVGCQSG-KRSM-MAATDLLNAGF 129 (151)
Q Consensus 107 iv~~c~~g-~~a~-~~~~~L~~~G~ 129 (151)
|+|.|..| .|+. .++..|...|+
T Consensus 120 VlVHC~aG~gRSg~~va~~L~~~g~ 144 (189)
T 3rz2_A 120 IAVHCVAGLGRAPVLVALALIEGGM 144 (189)
T ss_dssp EEEECSSSSTTHHHHHHHHHHTTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHcCC
Confidence 99999988 4544 44555555565
No 86
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=89.73 E-value=0.68 Score=32.25 Aligned_cols=28 Identities=25% Similarity=0.329 Sum_probs=19.5
Q ss_pred CCCCeEEEEeCCC-hhHHH--HHHHHHHCCC
Q 031899 102 RKHDEIIVGCQSG-KRSMM--AATDLLNAGF 129 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~~--~~~~L~~~G~ 129 (151)
..+.+|+|+|..| .|+.. ++..++..|+
T Consensus 81 ~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 81 EKGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp HTTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred hcCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 4578999999998 57653 4455565665
No 87
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=89.64 E-value=0.82 Score=30.59 Aligned_cols=26 Identities=23% Similarity=0.465 Sum_probs=17.8
Q ss_pred CCeEEEEeCCC-hhHHH-H-HHHHHHCCC
Q 031899 104 HDEIIVGCQSG-KRSMM-A-ATDLLNAGF 129 (151)
Q Consensus 104 ~~~iv~~c~~g-~~a~~-~-~~~L~~~G~ 129 (151)
+.+|+|+|..| .|+.. + +..+...|+
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~ 143 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKM 143 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCC
Confidence 68999999988 36554 3 344456676
No 88
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=88.26 E-value=0.84 Score=30.28 Aligned_cols=37 Identities=14% Similarity=0.395 Sum_probs=31.6
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+..++++||++-..+..++..|...|+ .+..+.|++.
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~ 69 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGELT 69 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCCC
Confidence 356899999998889999999999998 5888888853
No 89
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=87.68 E-value=1 Score=29.93 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=34.5
Q ss_pred HHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 94 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+..+.... +..++++||++-..+..++..|...|+ ++..+.|++.
T Consensus 22 L~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 66 (172)
T 1t5i_A 22 LFDLLDVL-EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGMP 66 (172)
T ss_dssp HHHHHHHS-CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred HHHHHHhC-CCCcEEEEECCHHHHHHHHHHHHhcCC-CEEEEECCCC
Confidence 33334333 356799999999899999999999998 5778888864
No 90
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=87.21 E-value=1.2 Score=29.21 Aligned_cols=45 Identities=13% Similarity=0.295 Sum_probs=34.4
Q ss_pred HHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 94 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+..+.... +..+++++|++-..+..++..|...|+ .+..+.|++.
T Consensus 21 l~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 65 (165)
T 1fuk_A 21 LTDLYDSI-SVTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDLP 65 (165)
T ss_dssp HHHHHHHT-TCSCEEEEESSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred HHHHHHhC-CCCCEEEEECCHHHHHHHHHHHHHcCC-CEEEEECCCC
Confidence 33444443 356789999998889999999999998 5788888853
No 91
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=87.16 E-value=5.4 Score=27.65 Aligned_cols=28 Identities=29% Similarity=0.489 Sum_probs=19.5
Q ss_pred CCCCeEEEEeCCC-hhHHH--HHHHHHHCCC
Q 031899 102 RKHDEIIVGCQSG-KRSMM--AATDLLNAGF 129 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~~--~~~~L~~~G~ 129 (151)
..+.+|+|+|..| .||.. ++..+...|+
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4578999999998 56553 3445566675
No 92
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=87.09 E-value=0.69 Score=29.91 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=19.9
Q ss_pred CCCeEEEEeCCC-hhHH-H-HHHHHHHCCCC
Q 031899 103 KHDEIIVGCQSG-KRSM-M-AATDLLNAGFA 130 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~-~-~~~~L~~~G~~ 130 (151)
.+.+|+++|..| .|+. . ++..+...|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999998 6766 3 34455667763
No 93
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=86.82 E-value=0.68 Score=30.38 Aligned_cols=37 Identities=22% Similarity=0.417 Sum_probs=31.2
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+..++++||++-..+..++..|...|+ .+..+.|++.
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 70 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGY-PCDKIHGGMI 70 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCCC
Confidence 345789999998889999999999998 5888888863
No 94
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=86.71 E-value=4.5 Score=27.64 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=19.0
Q ss_pred CCCeEEEEeCCC-hhHHH--HHHHHHHCCC
Q 031899 103 KHDEIIVGCQSG-KRSMM--AATDLLNAGF 129 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~~--~~~~L~~~G~ 129 (151)
.+.+|+|+|..| .||.. ++..+...|.
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 159 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENM 159 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCC
Confidence 577999999998 56653 3445566675
No 95
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=86.20 E-value=2.9 Score=25.94 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=52.6
Q ss_pred CCccccCHHHHHHHHhCCCEEE-ecCChhhHhc-CCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC
Q 031899 37 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFSA-GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~ii-DvR~~~e~~~-ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g 114 (151)
+.+..+|..-++.+.+.++++. |.+...++.. -.+++..-+.+. .....+..+.+...+..++.|++.++.|
T Consensus 16 Gd~~~lT~~a~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~G~~V~~l~d~G 89 (117)
T 3hh1_A 16 GNLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYH------SFNEERAVRQVIELLEEGSDVALVTDAG 89 (117)
T ss_dssp SCGGGSCHHHHHHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEECC------STTHHHHHHHHHHHHHTTCCEEEEEETT
T ss_pred CCHHHhhHHHHHHHHhCCEEEEecCchHHHHHHHhCCCCCEEeccC------CccHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3456789988888877887776 4444334332 234543322221 1111233444444455567788887333
Q ss_pred -----hhHHHHHHHHHHCCCCceeEccc
Q 031899 115 -----KRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 115 -----~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.+.......+++.|+ .+.++.|
T Consensus 90 dP~i~~~~~~l~~~~~~~gi-~v~viPG 116 (117)
T 3hh1_A 90 TPAISDPGYTMASAAHAAGL-PVVPVPG 116 (117)
T ss_dssp SCGGGSTTHHHHHHHHHTTC-CEEEEC-
T ss_pred cCeEeccHHHHHHHHHHCCC-cEEEeCC
Confidence 344566777788898 4777665
No 96
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=85.45 E-value=2.4 Score=28.81 Aligned_cols=29 Identities=17% Similarity=0.318 Sum_probs=18.5
Q ss_pred CCCCeEEEEeCCC-hhHHHH-H-HHHHHCCCC
Q 031899 102 RKHDEIIVGCQSG-KRSMMA-A-TDLLNAGFA 130 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~~~-~-~~L~~~G~~ 130 (151)
..+.+|+|+|..| .|+..+ + ..+...|..
T Consensus 123 ~~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~ 154 (195)
T 2q05_A 123 QRNEPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred HcCCcEEEEcCCCCChHHHHHHHHHHHHhCCC
Confidence 3578999999988 565533 3 333456654
No 97
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=85.14 E-value=1.2 Score=29.30 Aligned_cols=29 Identities=7% Similarity=0.252 Sum_probs=19.4
Q ss_pred CCCCeEEEEeCCC-hhHH-H-HHHHHHHCCCC
Q 031899 102 RKHDEIIVGCQSG-KRSM-M-AATDLLNAGFA 130 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~-~-~~~~L~~~G~~ 130 (151)
..+.+|+|+|..| .||. . ++..+...|++
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 3568999999998 4643 3 34555666763
No 98
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=84.57 E-value=6.7 Score=28.69 Aligned_cols=107 Identities=11% Similarity=0.194 Sum_probs=64.5
Q ss_pred CCccccCHHHHHHHHhCCCEEE-ecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC-
Q 031899 37 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG- 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~ii-DvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g- 114 (151)
+.+..+|...+..+.+.++++. |.|.........-+++.-+++. .....+..+.+...+..++.|++.++.|
T Consensus 26 G~~~~lT~rA~~~L~~aDvI~~edtr~~~~lL~~~~~~~~~i~~~------~~~~~~~~~~li~~l~~G~~Va~lsdaGd 99 (296)
T 3kwp_A 26 GNLDDMTFRAVKTLTAVDLIAAEDTRNTQKLLNHFEITTKQISFH------EHNTQERIPQLIAKLKQGMQIAQVSDAGM 99 (296)
T ss_dssp SCGGGCCHHHHHHHHHSSEEEESCHHHHHHHHHHTTCCCEEEECS------TTTHHHHHHHHHHHHHTTCEEEEECSSBC
T ss_pred CCccchhhHHHHHHhHhhhhhhhccccHHHHhhheeeeeeeeehh------hcchhhHhHHHHHHHhcCceEEEeccCCC
Confidence 3456789998888888888888 7675444332111223223331 0111233444555555677888887444
Q ss_pred ----hhHHHHHHHHHHCCCCceeEcccc---HHHHHhCCCCCC
Q 031899 115 ----KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPTE 150 (151)
Q Consensus 115 ----~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~pv~ 150 (151)
.........+.+.|+ .|.++.|= ..+....|+|++
T Consensus 100 P~i~~~g~~lv~~~~~~gi-~v~viPGiSA~~aA~a~~Glp~~ 141 (296)
T 3kwp_A 100 PSISDPGHELVNACIDAHI-PVVPLPGANAGLTALIASGLAPQ 141 (296)
T ss_dssp TTSSHHHHHHHHHHHHTTC-CEEECCCCCHHHHHHHHHSSCCS
T ss_pred CCCCCCchHHHHHHHHcCC-CeeeCCCcccchHHHHhccCCCC
Confidence 455567788888898 58888773 345555677764
No 99
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=84.40 E-value=5.9 Score=28.18 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=23.9
Q ss_pred CeEEEEeCCCh---hHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~---~a~~~~~~L~~~G~~~v~~l 135 (151)
++|+++|+.|+ .+-.+|+.|...|++ |.++
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 91 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVF 91 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 58999999874 466799999999994 6543
No 100
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=83.98 E-value=2.1 Score=32.04 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=36.8
Q ss_pred HHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 94 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+..+......+.++++||++-..+..++..|...|+ ++..+.|++.
T Consensus 266 l~~~l~~~~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (417)
T 2i4i_A 266 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 311 (417)
T ss_dssp HHHHHHTCCTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred HHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCCC
Confidence 444445555678899999998889999999999998 6888888764
No 101
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=82.85 E-value=0.14 Score=31.39 Aligned_cols=23 Identities=0% Similarity=0.023 Sum_probs=19.6
Q ss_pred ccccccCccccccccccccccCc
Q 031899 5 GDQQRCDNIGFISSKILSFCPKA 27 (151)
Q Consensus 5 ~~~~~~~~v~~l~gg~~~w~~~~ 27 (151)
..+.+|++|.+|.||+.+|....
T Consensus 72 L~~~G~~~v~~l~GG~~~W~~~g 94 (106)
T 3hix_A 72 LRSAGFEHVSELKGGLAAWKAIG 94 (106)
T ss_dssp HHHTTCSCEEECTTHHHHHHHTT
T ss_pred HHHcCCcCEEEecCCHHHHHHCC
Confidence 35678999999999999998863
No 102
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=82.59 E-value=2.4 Score=28.15 Aligned_cols=28 Identities=18% Similarity=0.213 Sum_probs=18.8
Q ss_pred CCCeEEEEeCCC-hhHHH--HHHHHHHCCCC
Q 031899 103 KHDEIIVGCQSG-KRSMM--AATDLLNAGFA 130 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~~--~~~~L~~~G~~ 130 (151)
.+.+|+|+|..| .|+.. ++..+...|..
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 467999999988 56543 34445566664
No 103
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=82.44 E-value=1.8 Score=29.29 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=30.4
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
..++++||++-..+..++..|+..|+ .+..+.|++.
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~ 89 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGV-EAVAIHGGKD 89 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTC-CEEEECTTSC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCCC
Confidence 45799999999889999999999998 5778888853
No 104
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=82.42 E-value=2.1 Score=30.77 Aligned_cols=30 Identities=10% Similarity=0.182 Sum_probs=23.6
Q ss_pred CeEEEEeCCCh---hHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~---~a~~~~~~L~~~G~~~v~~l 135 (151)
.+|+++|+.|+ .+-.+|+.|...||+ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 48999999874 466799999999994 5543
No 105
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=81.97 E-value=2.2 Score=31.54 Aligned_cols=30 Identities=10% Similarity=0.182 Sum_probs=23.7
Q ss_pred CeEEEEeCCCh---hHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~---~a~~~~~~L~~~G~~~v~~l 135 (151)
.+|+++|+.|. .+-.+|+.|...||+ |.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 58999999874 566799999999994 5543
No 106
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=81.45 E-value=3.7 Score=32.46 Aligned_cols=46 Identities=17% Similarity=0.335 Sum_probs=31.6
Q ss_pred CCCeEEEEeCCCh---hHHHHHHHHHHCCCCceeEc-ccc---------HHHHHhCCCCC
Q 031899 103 KHDEIIVGCQSGK---RSMMAATDLLNAGFAGITDI-AGG---------FAAWRQNGLPT 149 (151)
Q Consensus 103 ~~~~iv~~c~~g~---~a~~~~~~L~~~G~~~v~~l-~GG---------~~~W~~~g~pv 149 (151)
..++|+++|+.|+ .+-.+++.|...||+ |.++ -+. ++.|.+.|.++
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~g~~~ 109 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVVFLGKKKTPDCEYNYGLYKKFGGKV 109 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEEECCSSCCHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEECCCCCHHHHHHHHHHHhCCCce
Confidence 4678999999874 456788999999994 5533 221 35566666554
No 107
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=81.14 E-value=2.4 Score=30.65 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=23.8
Q ss_pred CeEEEEeCCCh---hHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~---~a~~~~~~L~~~G~~~v~~l 135 (151)
++|+++|+.|+ .+-.+|+.|...|+ +|.++
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~-~V~V~ 112 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGY-QPTIY 112 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTC-EEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCC-cEEEE
Confidence 58999999874 46679999999999 46544
No 108
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=80.86 E-value=2.6 Score=33.92 Aligned_cols=37 Identities=24% Similarity=0.230 Sum_probs=32.6
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
++.++||||.+-..+..++..|...|+ ++..+.||+.
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~-~~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGI-HAGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 567899999999899999999999998 6888999873
No 109
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=80.26 E-value=1.5 Score=30.17 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=31.1
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
...++++||++-..+..++..|...|+ .+..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~lhg~~~ 66 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDLS 66 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTC-CEEEECSSSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCC-CEEEEECCCC
Confidence 356899999998888899999999998 5788888853
No 110
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=78.63 E-value=18 Score=26.98 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=42.1
Q ss_pred HHHHHHHHhCC-CEEEecCCh----hhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhcc-CCCCeEEEEeCCC-hh
Q 031899 44 VRVAHELLQAG-HRYLDVRTP----EEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEIIVGCQSG-KR 116 (151)
Q Consensus 44 ~~~~~~~~~~~-~~iiDvR~~----~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iv~~c~~g-~~ 116 (151)
.+.+..+.+.+ ..|||+|+. ..+....| .-+++|+.+ ...+..+.+......+ ..+.+|+|+|..| .|
T Consensus 208 ~~~~~~L~~~GI~~VInL~~~~y~~~~~~~~gi-~~~~ipi~D----~~~P~~~~~~~fi~~~~~~~~~VLVHC~aG~gR 282 (348)
T 1ohe_A 208 ETYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGF-DHHDLFFAD----GSTPTDAIVKEFLDICENAEGAIAVHSKAGLGR 282 (348)
T ss_dssp HHHHHHHHHTTEEEEEECSCCSSCTHHHHTTTC-EEEECCCCT----TCCCCHHHHHHHHHHHHSCSSEEEEECSSSSHH
T ss_pred HHHHHHHHHcCCCEEEECCCCcCChhhhhcCCc-EEEEecCCC----CCCCCHHHHHHHHHHHHhCCCcEEEECCCCCCh
Confidence 34455555556 579999964 22322111 123455431 2222334444444433 4678999999988 56
Q ss_pred HHH-HHHHH-HHCCC
Q 031899 117 SMM-AATDL-LNAGF 129 (151)
Q Consensus 117 a~~-~~~~L-~~~G~ 129 (151)
+.. ++..| ...|+
T Consensus 283 TGtvvaayLm~~~g~ 297 (348)
T 1ohe_A 283 TGTLIACYIMKHYRM 297 (348)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCC
Confidence 443 33334 33665
No 111
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=77.82 E-value=11 Score=24.06 Aligned_cols=24 Identities=21% Similarity=0.119 Sum_probs=16.6
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhH
Q 031899 43 PVRVAHELLQAG-HRYLDVRTPEEF 66 (151)
Q Consensus 43 ~~~~~~~~~~~~-~~iiDvR~~~e~ 66 (151)
+.+++..+.+.+ ..|||+|+..|.
T Consensus 17 ~~~d~~~L~~~gi~~Vi~l~~~~e~ 41 (161)
T 2i6j_A 17 TENEILEWRKEGVKRVLVLPEDWEI 41 (161)
T ss_dssp SHHHHHHHHHHTCCEEEECSCHHHH
T ss_pred CHHHHHHHHHCCCCEEEEcCchhhh
Confidence 345566665556 679999998664
No 112
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=77.06 E-value=15 Score=26.44 Aligned_cols=110 Identities=18% Similarity=0.135 Sum_probs=61.4
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCChhhHhcCCCC-CceeeccccccCCCCCCCHHHHH-HHHhccCCCCeEEEEeCCC
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVE-EVSTRFRKHDEIIVGCQSG 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIp-gAi~ip~~~~~~~~~~~~~~~~~-~~~~~~~~~~~iv~~c~~g 114 (151)
+.+..+|..-++.+.+.++++.|.+...+... +++ ++.-++........ ....+.+. .+......++.|++.+...
T Consensus 25 Gd~~lLTl~A~~~L~~ADvV~~d~~~~~~ll~-~~~~~~~~~~~~k~~~~~-~~~~~~i~~~l~~~~~~G~~Vv~L~~GD 102 (280)
T 1s4d_A 25 GDPGLLTLHAANALRQADVIVHDALVNEDCLK-LARPGAVLEFAGKRGGKP-SPKQRDISLRLVELARAGNRVLRLKGGD 102 (280)
T ss_dssp SCTTSSBHHHHHHHHHCSEEEECSCSCTTGGG-GSSTTCCEEECSCCC--C-CCCHHHHHHHHHHHHHTTCCEEEEESBC
T ss_pred CCHHHHHHHHHHHHHhCCEEEEcCCCCHHHHH-hccCCCEEEecccccccc-ccCHHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 35678899988888888988899886544333 332 33222221100000 11222222 2333334466677776532
Q ss_pred ----hhHHHHHHHHHHCCCCceeEcccc---HHHHHhCCCCC
Q 031899 115 ----KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 149 (151)
Q Consensus 115 ----~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~pv 149 (151)
.+.......|.+.|+ .+.++-|= ..+....|.|+
T Consensus 103 P~i~g~g~~l~~~l~~~gi-~veviPGiSs~~aa~a~~Gipl 143 (280)
T 1s4d_A 103 PFVFGRGGEEALTLVEHQV-PFRIVPGITAGIGGLAYAGIPV 143 (280)
T ss_dssp TTSSSSHHHHHHHHHTTTC-CEEEECCCCTTTHHHHHTTCCS
T ss_pred CccccCHHHHHHHHHHCCC-CEEEEcCccHHHHHHHHcCCCc
Confidence 455567788888897 57777652 33555667776
No 113
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=77.00 E-value=4.8 Score=26.89 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=33.9
Q ss_pred HHHHhccCCCCeEEEEeCCC--hhHHHHHHHHHH---CCCCceeEccccH
Q 031899 95 EEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AGFAGITDIAGGF 139 (151)
Q Consensus 95 ~~~~~~~~~~~~iv~~c~~g--~~a~~~~~~L~~---~G~~~v~~l~GG~ 139 (151)
+.++..++++..+|+.|-.| ..|...|..|.. .|..++..+-||-
T Consensus 65 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~ 114 (163)
T 4fak_A 65 QRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGS 114 (163)
T ss_dssp HHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBT
T ss_pred HHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECC
Confidence 44566678888888888777 567788887765 6877888888874
No 114
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=77.00 E-value=5.9 Score=25.19 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=30.8
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWR 143 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~ 143 (151)
+++-+|+++.++......+...|+..||..+..-..|..++.
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 455567777777665667788899999977776677777764
No 115
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=75.83 E-value=4.1 Score=28.30 Aligned_cols=30 Identities=30% Similarity=0.390 Sum_probs=25.5
Q ss_pred eEEEEeCCC-hhHHHHHHHHHHCCCCceeEcc
Q 031899 106 EIIVGCQSG-KRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 106 ~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
.+-++|.+. .||..+-..|++.|| +|..+-
T Consensus 27 r~avVCaSN~NRSMEAH~~L~k~Gf-~V~SfG 57 (214)
T 4h3k_B 27 RVAVVSSSNQNRSMEAHNILSKRGF-SVRSFG 57 (214)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHTTC-EEEEEE
T ss_pred eEEEECCCCcchhHHHHHHHHHCCC-ceEeec
Confidence 577889876 799999999999999 687664
No 116
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=74.31 E-value=14 Score=26.77 Aligned_cols=111 Identities=19% Similarity=0.123 Sum_probs=58.6
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCChhhHhcCCCC-CceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCC-C
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQS-G 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIp-gAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~-g 114 (151)
+.+..+|..-++.+.+.++++.|.|...+... +++ ++..+..............+..+.+......++.|++.+.. .
T Consensus 35 Gdp~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~i~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP 113 (294)
T 2ybo_A 35 GDPGLLTLRAWALLQQAEVVVYDRLVARELIA-LLPESCQRIYVGKRCGHHSLPQEEINELLVRLARQQRRVVRLKGGDP 113 (294)
T ss_dssp SCGGGSCHHHHHHHTTCSEEEECTTSCHHHHH-HSCTTSEEEECC--------CHHHHHHHHHHHHHTTCCEEEEEEBCT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcCCCCHHHHH-hcccCCeEEecccccccccCCHHHHHHHHHHHHHCCCeEEEEcCCCC
Confidence 35678898888888778888889886554432 222 22222211100000001112222333334445566666432 2
Q ss_pred ---hhHHHHHHHHHHCCCCceeEcccc---HHHHHhCCCCC
Q 031899 115 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 149 (151)
Q Consensus 115 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~pv 149 (151)
.+.......|.+.|+ .+.++-|= ..+....|.|+
T Consensus 114 ~i~g~g~~l~~~l~~~gi-~vevIPGiSS~~aa~a~~Gipl 153 (294)
T 2ybo_A 114 FIFGRGAEELERLLEAGV-DCQVVPGVTAASGCSTYAGIPL 153 (294)
T ss_dssp TSSSSHHHHHHHHHHTTC-CEEEECCCCHHHHHHHHTTCCS
T ss_pred CccCCHHHHHHHHHHCCC-CEEEECCHHHHHHHHHHcCCCc
Confidence 445567788888897 57777762 23455567776
No 117
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=74.17 E-value=4.3 Score=29.67 Aligned_cols=44 Identities=16% Similarity=0.182 Sum_probs=33.8
Q ss_pred HHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 94 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
+..+..... ..++++||++-..+..++..|...|+ .+..+.|++
T Consensus 19 L~~ll~~~~-~~~~LVF~~t~~~~~~l~~~L~~~g~-~~~~lhg~l 62 (300)
T 3i32_A 19 LSDLLYVAS-PDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDM 62 (300)
T ss_dssp HHHHHHHHC-CSSEEEECSSHHHHHHHHHHHHTTTC-CEEEECSCC
T ss_pred HHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 333333333 67899999998888899999999998 577888885
No 118
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=74.16 E-value=15 Score=26.35 Aligned_cols=76 Identities=11% Similarity=0.040 Sum_probs=43.3
Q ss_pred CEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCce
Q 031899 55 HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGI 132 (151)
Q Consensus 55 ~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v 132 (151)
-+++.|.+.+|....--.|+--|-.+...-...-.+.+....+...+|.+. ++++.+|..+..-...|+..|++.+
T Consensus 155 ~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~--~~VsESGI~t~~dv~~l~~~G~~a~ 230 (258)
T 4a29_A 155 EPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSNV--VKVAKLGISERNEIEELRKLGVNAF 230 (258)
T ss_dssp CCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTS--EEEEEESSCCHHHHHHHHHTTCCEE
T ss_pred HHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCCC--EEEEcCCCCCHHHHHHHHHCCCCEE
Confidence 467777777775532112332222211110111223455566666677654 5558899888888889999999644
No 119
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=73.26 E-value=20 Score=24.80 Aligned_cols=109 Identities=19% Similarity=0.089 Sum_probs=60.4
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHH-HHHHhccCCCCeEEEEeCCC-
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFV-EEVSTRFRKHDEIIVGCQSG- 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~-~~~~~~~~~~~~iv~~c~~g- 114 (151)
+.+..+|...++.+.+.++++.|.+...+... ++ ++..++........ ....+.+ +.+.+....++.|++.+...
T Consensus 13 G~~~~LT~~A~~~L~~advv~~~~~~~~~~l~-~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~g~~V~~l~~GDP 89 (235)
T 1ve2_A 13 GGPEHLTLKALRVLEVAEVVLHDRLVHPGVLA-LA-KGELVPVGKEGYGG-KTPQEAITARLIALAREGRVVARLKGGDP 89 (235)
T ss_dssp SSGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TC-CSEEEEC--------CCCHHHHHHHHHHHHHTTCEEEEEESBCT
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCCCCHHHHH-hh-CcEEEEecccCccc-ccCHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 34567888888888888888888877655543 22 33333221000000 0111222 23333344566777765432
Q ss_pred ---hhHHHHHHHHHHCCCCceeEcccc---HHHHHhCCCCC
Q 031899 115 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 149 (151)
Q Consensus 115 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~pv 149 (151)
.........+.+.|+ ++.++.|= ..+....|.|+
T Consensus 90 ~i~~~~~~l~~~l~~~gi-~v~viPGiSs~~aa~a~~g~pl 129 (235)
T 1ve2_A 90 MVFGRGGEEALALRRAGI-PFEVVPGVTSAVGALSALGLPL 129 (235)
T ss_dssp TSSTTHHHHHHHHHHHTC-CEEEECCCCTTHHHHHHTTCCS
T ss_pred CcccCHHHHHHHHHHCCC-CEEEECCHhHHHHHHHHcCCCc
Confidence 345566677888887 57777762 33566678776
No 120
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=72.41 E-value=5.9 Score=32.29 Aligned_cols=44 Identities=16% Similarity=0.256 Sum_probs=34.6
Q ss_pred HHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 95 EEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 95 ~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
..+...+..+.+++|+|++-.++..++..|.+.|+ ++..+.|++
T Consensus 436 ~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi-~~~~lh~~~ 479 (661)
T 2d7d_A 436 GEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGI-KVNYLHSEI 479 (661)
T ss_dssp HHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTC
T ss_pred HHHHHHHhcCCeEEEEECCHHHHHHHHHHHHhcCC-CeEEEeCCC
Confidence 33333345677899999999999999999999998 577788875
No 121
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=71.87 E-value=6.9 Score=28.80 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=31.3
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+..++++||++-..+..++..|...|+ .+..+.|++.
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 285 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGMP 285 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCC-cEEEEeCCCC
Confidence 467899999998889999999999998 5777888753
No 122
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=71.74 E-value=3.6 Score=32.45 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=32.2
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
++.+++|||++-..+..++..|...|+ ++..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~-~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGI-SAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 466899999998889999999999998 6888899874
No 123
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=71.11 E-value=5.8 Score=25.66 Aligned_cols=28 Identities=18% Similarity=0.229 Sum_probs=18.9
Q ss_pred CCCCeEEEEeCCC-hhHHH-H-HHHHHHCCC
Q 031899 102 RKHDEIIVGCQSG-KRSMM-A-ATDLLNAGF 129 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~~-~-~~~L~~~G~ 129 (151)
..+.+|+++|..| .||.. + +..++..|+
T Consensus 83 ~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 83 SQNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred HcCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 3578999999998 67653 3 344455565
No 124
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=70.72 E-value=6.6 Score=26.98 Aligned_cols=31 Identities=29% Similarity=0.281 Sum_probs=25.5
Q ss_pred CeEEEEeCCC-hhHHHHHHHHHHCCCCceeEcc
Q 031899 105 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
-.+-++|.+. .||..+-..|++.|| +|..+-
T Consensus 10 l~~avVCaSN~NRSMEaH~~L~k~G~-~V~SfG 41 (198)
T 3p9y_A 10 LAVAVVDSSNMNRSMEAHNFLAKKGF-NVRSYG 41 (198)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTC-EEEEEE
T ss_pred ceEEEEcCCCCcccHHHHHHHHhCCC-ceeecC
Confidence 4678889876 799999999999999 677653
No 125
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=70.65 E-value=14 Score=23.43 Aligned_cols=87 Identities=18% Similarity=0.244 Sum_probs=42.8
Q ss_pred CccccCHHHHHHH-HhCC-CEEEecCChh----hHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhcc------CCCC
Q 031899 38 VPTSVPVRVAHEL-LQAG-HRYLDVRTPE----EFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF------RKHD 105 (151)
Q Consensus 38 ~~~~i~~~~~~~~-~~~~-~~iiDvR~~~----e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 105 (151)
.|...+.+++.++ .+.+ ..||++++.. .+...++ .-+++|.. ++..+..+.+......+ +++.
T Consensus 23 ~p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~~-~~~~~p~~----d~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (159)
T 1rxd_A 23 NPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFD----DGAPPSNQIVDDWLSLVKIKFREEPGC 97 (159)
T ss_dssp CCCGGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTC-EEEECCC------CCCCCHHHHHHHHHHHHHHHHHSTTC
T ss_pred CCccccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHHcCC-EEEeCCCc----CCCCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 3445577774444 4455 5688888642 1211111 12334432 12222233333322221 3568
Q ss_pred eEEEEeCCC-hhHH-HHHHHHHHCCC
Q 031899 106 EIIVGCQSG-KRSM-MAATDLLNAGF 129 (151)
Q Consensus 106 ~iv~~c~~g-~~a~-~~~~~L~~~G~ 129 (151)
+|+|+|..| .|+. .++..|...|.
T Consensus 98 ~vlVHC~aG~~Rtg~~~a~~l~~~~~ 123 (159)
T 1rxd_A 98 CIAVHCVAGLGRAPVLVALALIEGGM 123 (159)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHTTC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 999999988 4554 34455555665
No 126
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=70.45 E-value=5.2 Score=32.60 Aligned_cols=38 Identities=8% Similarity=0.069 Sum_probs=32.3
Q ss_pred cCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 101 FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 101 ~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
...+.+++|+|++-.++..++..|.+.|+ ++..+.|++
T Consensus 436 ~~~~~~vlVf~~t~~~ae~L~~~L~~~gi-~~~~lh~~~ 473 (664)
T 1c4o_A 436 AARGERTLVTVLTVRMAEELTSFLVEHGI-RARYLHHEL 473 (664)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTC
T ss_pred HhcCCEEEEEECCHHHHHHHHHHHHhcCC-CceeecCCC
Confidence 34577899999999999999999999998 577778875
No 127
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=70.29 E-value=8.1 Score=25.87 Aligned_cols=47 Identities=19% Similarity=0.193 Sum_probs=32.7
Q ss_pred HHHHHHhccCCCCeEEEEeCCC--hhHHHHHHHHHH---CCCCceeEccccH
Q 031899 93 FVEEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AGFAGITDIAGGF 139 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~g--~~a~~~~~~L~~---~G~~~v~~l~GG~ 139 (151)
.-+.+++.++++.-+|+.|-.| ..|...|..|.. .|..++..+-||-
T Consensus 59 E~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa 110 (167)
T 1to0_A 59 EGDRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGS 110 (167)
T ss_dssp HHHHHHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCS
T ss_pred HHHHHHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECC
Confidence 3344555666665578888777 567788888876 5767788787874
No 128
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=70.02 E-value=27 Score=24.85 Aligned_cols=106 Identities=13% Similarity=0.043 Sum_probs=59.1
Q ss_pred CCccccCHHHHHHHHhCCCEEE-ecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC-
Q 031899 37 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG- 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~ii-DvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g- 114 (151)
+.+..+|..-++.+.+.++++. |.+-..+.....-+++.-++.. .....+..+.+......++.|++.+...
T Consensus 14 G~~~lLT~~A~~~L~~AdvV~~~~~~~~~~ll~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~G~~Va~L~~GDP 87 (264)
T 3ndc_A 14 GAADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTA------PMSLDAIIDTIAEAHAAGQDVARLHSGDL 87 (264)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEECSTTSCGGGGGGSCTTCEEEECT------TSCHHHHHHHHHHHHHHTCCEEEEESBCT
T ss_pred CChHHHHHHHHHHHHcCCEEEEECCCCCHHHHhhcCCCCEEEecC------CCCHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3467789998888888887777 7765444332222355444331 0111122333333344466677766321
Q ss_pred ---hhHHHHHHHHHHCCCCceeEcccc--H-HHHHhCCCCC
Q 031899 115 ---KRSMMAATDLLNAGFAGITDIAGG--F-AAWRQNGLPT 149 (151)
Q Consensus 115 ---~~a~~~~~~L~~~G~~~v~~l~GG--~-~~W~~~g~pv 149 (151)
.........|.+.|+ .+.++-|= + .+....|.|+
T Consensus 88 ~iyg~~~~l~~~l~~~gi-~veviPGiSs~~aaaA~lG~pl 127 (264)
T 3ndc_A 88 SIWSAMGEQLRRLRALNI-PYDVTPGVPSFAAAAATLGAEL 127 (264)
T ss_dssp TSSCSHHHHHHHHHHTTC-CEEEECCCCHHHHHHHHHTCCS
T ss_pred ccccHHHHHHHHHHhCCC-CEEEeCCHHHHHHHHHHhCCCc
Confidence 345567778888898 57777762 1 2333446665
No 129
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=72.84 E-value=0.92 Score=29.95 Aligned_cols=37 Identities=22% Similarity=0.157 Sum_probs=30.3
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
++.++++||++-..+..++..|+..|+ .+..+.|++.
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~ 65 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGI-NNCYLEGEMV 65 (170)
Confidence 346789999998888889999999998 5777888764
No 130
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=69.25 E-value=6.9 Score=28.52 Aligned_cols=24 Identities=8% Similarity=0.167 Sum_probs=17.0
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhH
Q 031899 43 PVRVAHELLQAG-HRYLDVRTPEEF 66 (151)
Q Consensus 43 ~~~~~~~~~~~~-~~iiDvR~~~e~ 66 (151)
+++++..+.+.+ ..||+++...+.
T Consensus 28 ~~~d~~~L~~~GIt~Vlnl~~~~e~ 52 (294)
T 3nme_A 28 TPEDVDKLRKIGVKTIFCLQQDPDL 52 (294)
T ss_dssp STHHHHHHHHTTEEEEEECCCHHHH
T ss_pred CHHHHHHHHHCCCCEEEECCCCcch
Confidence 455666666667 679999987663
No 131
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=68.42 E-value=5.2 Score=24.67 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=21.7
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHH----HCCCCceeE
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLL----NAGFAGITD 134 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~----~~G~~~v~~ 134 (151)
.+..+|++.|..|..+..++..++ +.|++ +.+
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~-v~i 39 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVR-VIA 39 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS-EEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCc-eEE
Confidence 345679999999987777776554 45763 444
No 132
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=67.05 E-value=23 Score=22.89 Aligned_cols=85 Identities=19% Similarity=0.181 Sum_probs=45.6
Q ss_pred ccCHHHHHHHHhCC-CEEEecCChhhHhc-----CCC--CC--ceeeccccccCCCCCCCHHHHHHHHhcc--CCCCeEE
Q 031899 41 SVPVRVAHELLQAG-HRYLDVRTPEEFSA-----GHA--TG--AINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEII 108 (151)
Q Consensus 41 ~i~~~~~~~~~~~~-~~iiDvR~~~e~~~-----ghI--pg--Ai~ip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv 108 (151)
.++.+.+..+.+.+ -++|+.|+..+-.. ..+ .| .+++|.+ . .....+.+..+...+ ..+++|+
T Consensus 27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~D-v----~~~~~~~v~~~~~~i~~~~G~dVL 101 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVD-W----QNPKVEDVEAFFAAMDQHKGKDVL 101 (157)
T ss_dssp CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCC-T----TSCCHHHHHHHHHHHHHTTTSCEE
T ss_pred CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCC-C----CCCCHHHHHHHHHHHHhcCCCCEE
Confidence 45778888888888 56788886543210 000 12 4455552 1 111124455544432 1233899
Q ss_pred EEeCCChhHHH-HHHHHHHCCCC
Q 031899 109 VGCQSGKRSMM-AATDLLNAGFA 130 (151)
Q Consensus 109 ~~c~~g~~a~~-~~~~L~~~G~~ 130 (151)
|.|.++.+... .+..+...|.+
T Consensus 102 VnnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 102 VHCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp EECSBSHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCHHHHHHHHHHHcCCC
Confidence 99998865443 33344556753
No 133
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=66.79 E-value=17 Score=22.15 Aligned_cols=26 Identities=23% Similarity=0.431 Sum_probs=18.0
Q ss_pred CeEEEEeCCChhHHH-HH----HHHHHCCCC
Q 031899 105 DEIIVGCQSGKRSMM-AA----TDLLNAGFA 130 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~-~~----~~L~~~G~~ 130 (151)
.+|++.|++|..++. +. ..+.+.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 579999999965443 33 356677885
No 134
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=66.20 E-value=14 Score=25.87 Aligned_cols=107 Identities=9% Similarity=0.005 Sum_probs=55.2
Q ss_pred ccCHHHHHHHHhCCCEEE-ecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC-----
Q 031899 41 SVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG----- 114 (151)
Q Consensus 41 ~i~~~~~~~~~~~~~~ii-DvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g----- 114 (151)
.+|..-++.+.+.++++. |.|...+.....-+++.-+.. ...........+..+.+...+..++.|++.|..|
T Consensus 20 LlTlrA~~~L~~aDvI~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~G~~Va~ls~~GdP~i~ 98 (242)
T 1wyz_A 20 VLPSYNTEIIRGIRHFIVEDVRSARRFLKKVDREIDIDSL-TFYPLNKHTSPEDISGYLKPLAGGASMGVISEAGCPAVA 98 (242)
T ss_dssp HSCTHHHHHHTTCCEEEESCHHHHHHHHHHHCSSSCTTCC-CCEECCSSCCHHHHHHHHHHHHTTCCEEEECC-------
T ss_pred ccCHHHHHHHHhCCEEEEeCCcchHHHHHhcCCCCceeee-eeecccccCHHHHHHHHHHHHHcCCEEEEEecCCCCccc
Confidence 478887777777777777 655444332211111110000 0000111112344455555555677888887533
Q ss_pred hhHHHHHHHHHHCCCCceeEcccc---HHHHHhCCCCC
Q 031899 115 KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 149 (151)
Q Consensus 115 ~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~pv 149 (151)
.+.......+++.|+ .+.++.|= ..+....|.|.
T Consensus 99 ~~g~~l~~~l~~~gi-~vevIPGiSs~~aa~a~~G~p~ 135 (242)
T 1wyz_A 99 DPGADVVAIAQRQKL-KVIPLVGPSSIILSVMASGFNG 135 (242)
T ss_dssp CHHHHHHHHHHHTTC-CEEECCCCCHHHHHHHHHTSCS
T ss_pred CcHHHHHHHHHHCCC-CEEEeCcHHHHHHHHHHcCCCC
Confidence 344456677788898 57777762 23445556663
No 135
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=65.82 E-value=6.3 Score=28.58 Aligned_cols=46 Identities=22% Similarity=0.281 Sum_probs=34.9
Q ss_pred HHHHHhcc-CCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 94 VEEVSTRF-RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 94 ~~~~~~~~-~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+..+...+ ....+++++|++-..+..++..|+..|+ ++..+.|++.
T Consensus 227 ~~~l~~~l~~~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 273 (367)
T 1hv8_A 227 FEALCRLLKNKEFYGLVFCKTKRDTKELASMLRDIGF-KAGAIHGDLS 273 (367)
T ss_dssp HHHHHHHHCSTTCCEEEECSSHHHHHHHHHHHHHTTC-CEEEECSSSC
T ss_pred HHHHHHHHhcCCCcEEEEECCHHHHHHHHHHHHhcCC-CeEEeeCCCC
Confidence 34443333 3566789999998889999999999998 5778888753
No 136
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=65.82 E-value=9 Score=25.36 Aligned_cols=28 Identities=21% Similarity=0.367 Sum_probs=19.1
Q ss_pred CCCCeEEEEeCCC-hhHHHH--HHHHHHCCC
Q 031899 102 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGF 129 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~~~--~~~L~~~G~ 129 (151)
..+.+|+++|..| .|+..+ +..+...|+
T Consensus 85 ~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 85 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred hcCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 3578999999988 566543 344455676
No 137
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=65.76 E-value=8.1 Score=28.90 Aligned_cols=83 Identities=12% Similarity=0.155 Sum_probs=44.5
Q ss_pred CHHHHHHHHh----CCCEEEecCChhhHhcCCCCC-ceeeccccccCCCCCCCHHHHHHHHhc----c--CCCCeEEEEe
Q 031899 43 PVRVAHELLQ----AGHRYLDVRTPEEFSAGHATG-AINVPYMYRVGSGMTKNLKFVEEVSTR----F--RKHDEIIVGC 111 (151)
Q Consensus 43 ~~~~~~~~~~----~~~~iiDvR~~~e~~~ghIpg-Ai~ip~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~iv~~c 111 (151)
+.+++..+++ +.+.|++++++..|....+.+ -.++|+.+ ...++.+.+...... + +++.+++++|
T Consensus 51 ~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD----~~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC 126 (339)
T 3v0d_A 51 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDD----HNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHS 126 (339)
T ss_dssp EHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECT----TSCCCHHHHHHHHHHHHHHHHTCTTCEEEEEC
T ss_pred CHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCC----CCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 4556655554 348899998655555443333 33556532 222333333222222 2 3457899999
Q ss_pred CCC-hhH-HHHHHHHHHCCC
Q 031899 112 QSG-KRS-MMAATDLLNAGF 129 (151)
Q Consensus 112 ~~g-~~a-~~~~~~L~~~G~ 129 (151)
..| .|+ ..++..|...|.
T Consensus 127 ~~G~gRtg~~ia~~Li~~~~ 146 (339)
T 3v0d_A 127 KGGKGRTGTLVSSWLLEDGK 146 (339)
T ss_dssp SSSSHHHHHHHHHHHHHTTS
T ss_pred CCCCcchHHHHHHHHHHhcC
Confidence 877 443 345555555543
No 138
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=65.67 E-value=6 Score=29.06 Aligned_cols=37 Identities=14% Similarity=0.162 Sum_probs=31.7
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
...++++||++-..+..++..|+..|+ ++..+.|++.
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~ 278 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDLQ 278 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCC-cEEEeCCCCC
Confidence 457899999998889999999999998 6888888853
No 139
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=65.39 E-value=11 Score=28.12 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=30.2
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.++.+++|+|++-..+..++..|...|+ ++..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGI-KAKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCC-CcEEEec
Confidence 4577899999998888899999999998 5777888
No 140
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=65.20 E-value=33 Score=24.11 Aligned_cols=106 Identities=8% Similarity=-0.027 Sum_probs=57.9
Q ss_pred CCccccCHHHHHHHHhCCCEEE-ecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC-
Q 031899 37 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG- 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~ii-DvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g- 114 (151)
+.+..+|...++.+.+.++++. |.+...+.....-+++.-+... .....+..+.+...+..++.|++.+...
T Consensus 15 G~~~~lT~~A~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~g~~V~~l~~GDP 88 (253)
T 4e16_A 15 GDKELITLKGYKLLSNADVVIYAGSLVNPELLEYCKEDCQIHNSA------HMDLQEIIDVMREGIENNKSVVRLQTGDF 88 (253)
T ss_dssp SCGGGSCHHHHHHHHHCSEEEECTTTSCGGGGGGSCTTCEEEEGG------GCCHHHHHHHHHHHHHTTCCEEEEESBCT
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHhhcCCCCEEEecC------CCCHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3457789998888888888777 6654443322111233222210 0011122333334444566777776321
Q ss_pred ---hhHHHHHHHHHHCCCCceeEcccc---HHHHHhCCCCC
Q 031899 115 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 149 (151)
Q Consensus 115 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~pv 149 (151)
.+.......|.+.|+ .+.++-|= ..+....|.|+
T Consensus 89 ~i~~~~~~l~~~l~~~gi-~veviPGiSS~~aa~a~~G~pl 128 (253)
T 4e16_A 89 SIYGSIREQVEDLNKLNI-DYDCTPGVSSFLGAASSLGVEY 128 (253)
T ss_dssp TTTCCHHHHHHHHHHHTC-CEEEECCCCHHHHHHHHHTCCS
T ss_pred ccccCHHHHHHHHHHCCC-CEEEECCHHHHHHHHHHhCCCc
Confidence 345567778888888 57777762 23444457775
No 141
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=64.99 E-value=6 Score=29.33 Aligned_cols=36 Identities=17% Similarity=0.349 Sum_probs=31.1
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
...++++||++-..+..++..|...|+ ++..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGH-QVALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCC-eEEEecCCC
Confidence 356899999998899999999999998 588888885
No 142
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=64.59 E-value=6.2 Score=29.39 Aligned_cols=36 Identities=11% Similarity=0.354 Sum_probs=30.9
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
..++++||++-..+..++..|.+.|+ ++..+.|++.
T Consensus 276 ~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~~ 311 (410)
T 2j0s_A 276 ITQAVIFCNTKRKVDWLTEKMREANF-TVSSMHGDMP 311 (410)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTSC
T ss_pred CCcEEEEEcCHHHHHHHHHHHHhCCC-ceEEeeCCCC
Confidence 45789999998889999999999998 5888888863
No 143
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=64.56 E-value=5.7 Score=29.44 Aligned_cols=37 Identities=16% Similarity=0.286 Sum_probs=31.3
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
...++++||++-..+..++..|...|+ .+..+.|++.
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGY-SCYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTC-CEEEECTTSC
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCC-CeEEecCCCC
Confidence 456899999998889999999999998 5778888763
No 144
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=64.23 E-value=9.4 Score=27.84 Aligned_cols=26 Identities=23% Similarity=0.194 Sum_probs=22.3
Q ss_pred ChhHHHHHHHHHHCCCCceeEccccH
Q 031899 114 GKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 114 g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
|..-..++..|+++|..+...||||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 35567899999999999999999984
No 145
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=63.63 E-value=10 Score=23.80 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=20.3
Q ss_pred EEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 108 IVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 108 v~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
|++|+.|.-...++..|.+.|+ +|.+++-
T Consensus 10 viIiG~G~~G~~la~~L~~~g~-~v~vid~ 38 (140)
T 3fwz_A 10 ALLVGYGRVGSLLGEKLLASDI-PLVVIET 38 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred EEEECcCHHHHHHHHHHHHCCC-CEEEEEC
Confidence 4556777777778888888887 4666653
No 146
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=63.14 E-value=30 Score=26.70 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=60.0
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCChhhHhcCCCC-CceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC-
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG- 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIp-gAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g- 114 (151)
+.+..+|..-+..+.+.++++.|.+.+.+... +++ ++..++.............+..+.+......++.|++.+...
T Consensus 226 Gd~~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~~~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP 304 (457)
T 1pjq_A 226 GDAGLLTLKGLQQIQQADIVVYDRLVSDDIMN-LVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLKGGDP 304 (457)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TSCTTSEEEECSCC---CCCTTHHHHHHHHHHHHTTCEEEEEESBCT
T ss_pred CChHHccHHHHHHHHhCCEEEEeCCCCHHHHh-hcccCCEEEeccccccccCCCHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34678899988888888988999886655443 332 333333211111111112222333434444566777665432
Q ss_pred ---hhHHHHHHHHHHCCCCceeEcccc---HHHHHhCCCCC
Q 031899 115 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 149 (151)
Q Consensus 115 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~pv 149 (151)
.+.......|.+.|+ .+.++.|= ..+....|.|+
T Consensus 305 ~i~g~g~~l~~~l~~~gi-~v~vvPGiSs~~aa~a~~Gipl 344 (457)
T 1pjq_A 305 FIFGRGGEELETLCHAGI-PFSVVPGITAASGCSAYSGIPL 344 (457)
T ss_dssp TTSSSHHHHHTTTTTTTC-CEEEECCCCHHHHHHHHTTCCS
T ss_pred CccCCHHHHHHHHHHCCC-CEEEeCCHhHHHHHHHHcCCCc
Confidence 344455666677787 57777662 22344457775
No 147
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=63.02 E-value=11 Score=29.64 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=31.4
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHC---CCCceeEccccHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNA---GFAGITDIAGGFA 140 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~---G~~~v~~l~GG~~ 140 (151)
.++.+++|||++-..+..++..|... |+ .+..+.|++.
T Consensus 337 ~~~~~~iVF~~s~~~~~~l~~~L~~~~~~~~-~v~~~h~~~~ 377 (563)
T 3i5x_A 337 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDL-PILEFHGKIT 377 (563)
T ss_dssp TTCCEEEEECSCHHHHHHHHHHHHHHHTTTS-CEEEESTTSC
T ss_pred CCCCcEEEEcCcHHHHHHHHHHHHHhccCCc-eEEEecCCCC
Confidence 56778999999988888999999886 77 5778888863
No 148
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=62.99 E-value=12 Score=25.13 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=34.6
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE---cc----ccHHHHHhCCCCC
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---IA----GGFAAWRQNGLPT 149 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~---l~----GG~~~W~~~g~pv 149 (151)
.++++|+++.+ +|.....++..|++.|.+.|.+ ++ +|.....+.|.|+
T Consensus 124 ~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~~v 181 (190)
T 2dy0_A 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITS 181 (190)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTCEE
T ss_pred CCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCCcE
Confidence 46788988875 7888888999999999876542 22 4566665557665
No 149
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=62.21 E-value=13 Score=24.73 Aligned_cols=48 Identities=19% Similarity=0.212 Sum_probs=34.4
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCCceeEc------cccHHHHHhCCCCC
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI------AGGFAAWRQNGLPT 149 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l------~GG~~~W~~~g~pv 149 (151)
.++++|+++.+ +|.....++..|++.|.+.+.+. .+|-+...+.|.|+
T Consensus 112 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~ 168 (180)
T 2p1z_A 112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEY 168 (180)
T ss_dssp CTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCE
T ss_pred CCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeE
Confidence 45788888864 78888889999999998765432 25555555567775
No 150
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=61.84 E-value=8.6 Score=32.24 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=32.0
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+.++++|+|++-..+..++..|.+.|+ ...+|.|+..
T Consensus 473 ~gqpVLVFt~S~e~sE~Ls~~L~~~Gi-~~~vLhgkq~ 509 (822)
T 3jux_A 473 KGQPVLVGTTSIEKSELLSSMLKKKGI-PHQVLNAKYH 509 (822)
T ss_dssp HTCCEEEEESSHHHHHHHHHHHHTTTC-CCEEECSCHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCC-CEEEeeCCch
Confidence 578999999999999999999999999 4677888743
No 151
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=61.56 E-value=4 Score=25.01 Aligned_cols=28 Identities=14% Similarity=0.208 Sum_probs=17.9
Q ss_pred CCCeEEEEeCCChhHHHHHH----HHHHCCCC
Q 031899 103 KHDEIIVGCQSGKRSMMAAT----DLLNAGFA 130 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~----~L~~~G~~ 130 (151)
+.-+|++.|++|..++.++. .+.+.|++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 34469999999854335554 44556774
No 152
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=61.47 E-value=13 Score=28.25 Aligned_cols=34 Identities=24% Similarity=0.173 Sum_probs=29.4
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
.++++|++-..+..++..|.+.|+ ++..+.|++.
T Consensus 302 ~~lVF~~t~~~a~~l~~~L~~~~~-~~~~lhg~~~ 335 (434)
T 2db3_A 302 GTIVFVETKRGADFLASFLSEKEF-PTTSIHGDRL 335 (434)
T ss_dssp TEEEECSSHHHHHHHHHHHHHTTC-CEEEESTTSC
T ss_pred CEEEEEeCcHHHHHHHHHHHhCCC-CEEEEeCCCC
Confidence 389999998889999999999999 5888888853
No 153
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=61.15 E-value=29 Score=25.04 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=47.2
Q ss_pred cCHHHHHHHHh----CC-CEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChh
Q 031899 42 VPVRVAHELLQ----AG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 116 (151)
Q Consensus 42 i~~~~~~~~~~----~~-~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~ 116 (151)
++.+++.++.+ -+ .++++|.+.+|-....--|+--|-.+.......-.+.+....+...++.+. +++|.+|..
T Consensus 153 L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~--~vIaesGI~ 230 (272)
T 3tsm_A 153 VDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDR--LLVGESGIF 230 (272)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTS--EEEEESSCC
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCC--cEEEECCCC
Confidence 34455544432 23 456777777765432222221111110000111123355566666676554 455889988
Q ss_pred HHHHHHHHHHCCCCce
Q 031899 117 SMMAATDLLNAGFAGI 132 (151)
Q Consensus 117 a~~~~~~L~~~G~~~v 132 (151)
+..-+..+.+.|++-+
T Consensus 231 t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 231 THEDCLRLEKSGIGTF 246 (272)
T ss_dssp SHHHHHHHHTTTCCEE
T ss_pred CHHHHHHHHHcCCCEE
Confidence 8788888899999644
No 154
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=60.19 E-value=12 Score=29.55 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=31.3
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHC---CCCceeEccccHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNA---GFAGITDIAGGFA 140 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~---G~~~v~~l~GG~~ 140 (151)
.++.+++|||++-..+..++..|+.. |+ .+..+.|++.
T Consensus 286 ~~~~~~iVF~~t~~~~~~l~~~L~~~~~~~~-~v~~~hg~~~ 326 (579)
T 3sqw_A 286 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDL-PILEFHGKIT 326 (579)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHHTTTS-CEEEESTTSC
T ss_pred CCCCcEEEECCcHHHHHHHHHHHHHhhcCCC-cEEEecCCCC
Confidence 45778999999988888999999876 77 5778888853
No 155
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=60.04 E-value=40 Score=23.32 Aligned_cols=108 Identities=19% Similarity=0.136 Sum_probs=57.6
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC--
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g-- 114 (151)
+.+..+|...++.+.+.++++.|.+...+... +++ +-.++....... .....+..+.+......++.|++.+...
T Consensus 11 G~~~~LT~~A~~~L~~advI~~~~~~~~~~l~-~~~-~~~i~~~~~~~~-~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~ 87 (239)
T 1va0_A 11 GDPELLTLKAYRLLKEAPVVLYDRLVDERVLA-LAP-GEKVYVGKEEGE-SEKQEEIHRLLLRHARAHPFVVRLKGGDPM 87 (239)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TCC-SEEEECCCCC-----CHHHHHHHHHHHHHTSSEEEEEESBCTT
T ss_pred CCHHHHHHHHHHHHHhCCEEEEcCCCCHHHHh-hcc-ccEEeccccccc-ccCHHHHHHHHHHHHHCCCcEEEEeCCCCc
Confidence 34567888888888888888888776555442 333 333322100000 0011122223333344566777765432
Q ss_pred --hhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCC
Q 031899 115 --KRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 115 --~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv 149 (151)
.........|.+.|+ .+.++.| ..+...+|.|+
T Consensus 88 i~~~~~~l~~~l~~~gi-~v~viPG-iSs~~aag~pl 122 (239)
T 1va0_A 88 VFGRGGEEVLFLLRHGV-PVEVVPG-VTSLLASGLPL 122 (239)
T ss_dssp SSSSHHHHHHHHHHTTC-CEEEECC-CCGGGTTCCCS
T ss_pred cccCHHHHHHHHHHCCC-cEEEECC-cchHhhcCCCc
Confidence 345567777888887 5777764 33333335554
No 156
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=58.59 E-value=17 Score=30.76 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=32.7
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
.+.++++|+|.+-..+..++..|+..|+. +.+|.|...
T Consensus 439 ~~gqpvLVft~sie~se~Ls~~L~~~gi~-~~vLnak~~ 476 (853)
T 2fsf_A 439 AKGQPVLVGTISIEKSELVSNELTKAGIK-HNVLNAKFH 476 (853)
T ss_dssp TTTCCEEEEESSHHHHHHHHHHHHHTTCC-CEECCTTCH
T ss_pred cCCCCEEEEECcHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 46789999999999999999999999994 677888754
No 157
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=58.31 E-value=16 Score=24.34 Aligned_cols=47 Identities=26% Similarity=0.234 Sum_probs=32.0
Q ss_pred HHHHHhccCCCCeEEEEeCCC--hhHHHHHHHHHH---CCCCceeEccccHHH
Q 031899 94 VEEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AGFAGITDIAGGFAA 141 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g--~~a~~~~~~L~~---~G~~~v~~l~GG~~~ 141 (151)
-+.+.+.++++.-+|+.|..| ..|...|..|.+ .| .++..+-||-.+
T Consensus 55 ~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~i~FvIGGa~G 106 (163)
T 1o6d_A 55 TEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KDITILIGGPYG 106 (163)
T ss_dssp HHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CCEEEEECCTTC
T ss_pred HHHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 444556676665578888777 567778877765 47 688888888543
No 158
>1tf5_A Preprotein translocase SECA subunit; ATPase, helicase, translocation, secretion, protein transport; 2.18A {Bacillus subtilis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1tf2_A 3iqy_A 1m6n_A 1m74_A* 3iqm_A 3jv2_A* 2ibm_A* 3dl8_A 1sx0_A 1sx1_A 1tm6_A
Probab=57.48 E-value=9.2 Score=32.27 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=32.1
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+.++++|+|++-..+..++..|...|+. +.+|.|...
T Consensus 431 ~~~pvLVft~s~~~se~Ls~~L~~~gi~-~~vLhg~~~ 467 (844)
T 1tf5_A 431 TGQPVLVGTVAVETSELISKLLKNKGIP-HQVLNAKNH 467 (844)
T ss_dssp HTCCEEEEESCHHHHHHHHHHHHTTTCC-CEEECSSCH
T ss_pred cCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCcc
Confidence 4678999999999999999999999994 677888754
No 159
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=57.30 E-value=18 Score=24.60 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=34.4
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCCceeEc------cccHHHHHhCCCCC
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI------AGGFAAWRQNGLPT 149 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l------~GG~~~W~~~g~pv 149 (151)
.++++|+++.+ +|.....++..|++.|.+.+.++ .+|.+.....|.|+
T Consensus 109 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v 165 (205)
T 2wns_A 109 NPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRL 165 (205)
T ss_dssp CTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEE
T ss_pred CCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeE
Confidence 36778888864 78888889999999998765432 25566666667665
No 160
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=57.11 E-value=7.6 Score=28.80 Aligned_cols=37 Identities=5% Similarity=0.183 Sum_probs=28.4
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
...++++||++-..+..++..|...|+ ++..+.|++.
T Consensus 279 ~~~~~lvf~~~~~~~~~l~~~l~~~~~-~~~~~h~~~~ 315 (414)
T 3eiq_A 279 TITQAVIFINTRRKVDWLTEKMHARDF-TVSAMHGDMD 315 (414)
T ss_dssp CCSSCEEECSCHHHHHHHHHHHHTTTC-CCEEC---CH
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHhcCC-eEEEecCCCC
Confidence 345789999998889899999999998 5888888864
No 161
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=56.84 E-value=18 Score=25.45 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=35.1
Q ss_pred cCCCCeEEEEe---CCChhHHHHHHHHHHCCCCceeE---c----cccHHHHHhCCCCC
Q 031899 101 FRKHDEIIVGC---QSGKRSMMAATDLLNAGFAGITD---I----AGGFAAWRQNGLPT 149 (151)
Q Consensus 101 ~~~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~~---l----~GG~~~W~~~g~pv 149 (151)
+.++++|+++. .+|.....++..|++.|.+.+.+ + .+|.+.....|.|+
T Consensus 134 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v 192 (234)
T 3m3h_A 134 AEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVAS 192 (234)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCE
T ss_pred cCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCE
Confidence 34678888876 47888888999999999864432 2 24556666778776
No 162
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=56.07 E-value=10 Score=23.17 Aligned_cols=26 Identities=8% Similarity=0.074 Sum_probs=18.5
Q ss_pred CeEEEEeCCChhHHHHHH----HHHHCCCC
Q 031899 105 DEIIVGCQSGKRSMMAAT----DLLNAGFA 130 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~----~L~~~G~~ 130 (151)
.+|++.|++|..++.++. .+++.|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 469999999966555554 45667884
No 163
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=55.57 E-value=16 Score=24.00 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=25.8
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
++++|+++.+ +|.....++..|++.|.+.|.+
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEE
Confidence 4778888865 7888888999999999876653
No 164
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=55.15 E-value=13 Score=23.77 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=25.4
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
++++|+++.+ +|.....++..|++.|.+.|.+
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~ 116 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKI 116 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEE
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEE
Confidence 4678888864 7888888999999999876653
No 165
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=55.12 E-value=11 Score=30.91 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=32.0
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
...++++||++-..+..++..|++.|+ ++..+.|++.
T Consensus 395 ~~~~vLVFv~Tr~~ae~la~~L~~~g~-~v~~lHG~l~ 431 (666)
T 3o8b_A 395 RGGRHLIFCHSKKKCDELAAKLSGLGI-NAVAYYRGLD 431 (666)
T ss_dssp SSSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECTTSC
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHhCCC-cEEEecCCCC
Confidence 467899999999899999999999998 6888888764
No 166
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=55.01 E-value=18 Score=24.68 Aligned_cols=46 Identities=11% Similarity=0.093 Sum_probs=28.1
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCC
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPT 149 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv 149 (151)
..+++++|.. |..+..++..|++.||+-+.+++.....+.-.|+|+
T Consensus 11 ~~k~v~IiGA-Gg~g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~V 56 (220)
T 4ea9_A 11 AIGGVVIIGG-GGHAKVVIESLRACGETVAAIVDADPTRRAVLGVPV 56 (220)
T ss_dssp CSSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECSCC---CBTTBCE
T ss_pred CCCCEEEEcC-CHHHHHHHHHHHhCCCEEEEEEeCCcccCcCCCeeE
Confidence 3457888854 445667788888889976767776544333345554
No 167
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=54.98 E-value=25 Score=22.74 Aligned_cols=28 Identities=29% Similarity=0.393 Sum_probs=18.5
Q ss_pred CCCeEEEEeCCC-hhHH-HHHHHHHH-CCCC
Q 031899 103 KHDEIIVGCQSG-KRSM-MAATDLLN-AGFA 130 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~-~~~~~L~~-~G~~ 130 (151)
.+.+|+|+|..| .|+. .++..|.. .|++
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHhCCC
Confidence 578999999988 4544 34444443 6763
No 168
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=54.51 E-value=39 Score=25.45 Aligned_cols=72 Identities=8% Similarity=0.178 Sum_probs=39.6
Q ss_pred CCCEEEecCChhhHhcCCCCCc-eeeccccccCCCCCCCHHHHHHHHhc----c--CCCCeEEEEeCCC-hhH-HHHHHH
Q 031899 53 AGHRYLDVRTPEEFSAGHATGA-INVPYMYRVGSGMTKNLKFVEEVSTR----F--RKHDEIIVGCQSG-KRS-MMAATD 123 (151)
Q Consensus 53 ~~~~iiDvR~~~e~~~ghIpgA-i~ip~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~iv~~c~~g-~~a-~~~~~~ 123 (151)
+.+.|+.++. ..|......+. .++|+. +...++.+.+..+... + +++.+++++|..| .|+ ..++..
T Consensus 62 ~~y~V~NLse-~~Yd~~~f~~~V~~~~~p----D~~~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GRtg~~ia~~ 136 (361)
T 3n0a_A 62 DHYTVYNLSP-KSYRTAKFHSRVSECSWP----IRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAM 136 (361)
T ss_dssp TCEEEEECSS-SCCGGGSCGGGEEECCCC----SSSCCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHH
T ss_pred CeEEEEECCC-CCCChhhcCCcEEEeecC----CCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCccHHHHHHHH
Confidence 4588999964 56665555443 345553 2223333333222221 2 4567899999877 443 455556
Q ss_pred HHHCCC
Q 031899 124 LLNAGF 129 (151)
Q Consensus 124 L~~~G~ 129 (151)
|...|.
T Consensus 137 Li~~~~ 142 (361)
T 3n0a_A 137 FIFCNL 142 (361)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 666554
No 169
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=54.49 E-value=21 Score=23.70 Aligned_cols=47 Identities=15% Similarity=0.137 Sum_probs=33.1
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCcee---Ecc---ccHHHHHhCCCCC
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT---DIA---GGFAAWRQNGLPT 149 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~---~l~---GG~~~W~~~g~pv 149 (151)
++++|+++.+ +|.....++..|++.|.+.+. +++ +|.+...+.|.|+
T Consensus 105 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~ 160 (178)
T 2yzk_A 105 PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRL 160 (178)
T ss_dssp CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEE
T ss_pred CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcE
Confidence 6788888864 788888899999999986443 333 4455555566664
No 170
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=54.29 E-value=23 Score=24.30 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=25.3
Q ss_pred CCeEEEEeC---CChhHHHHHHHHHHCCCCceeEc
Q 031899 104 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 104 ~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
++.++++++ +|.....+...|++.|.++++++
T Consensus 124 ~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~ 158 (209)
T 1i5e_A 124 ERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFM 158 (209)
T ss_dssp TSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 567777764 78888889999999998887644
No 171
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=54.22 E-value=11 Score=23.78 Aligned_cols=26 Identities=35% Similarity=0.581 Sum_probs=17.8
Q ss_pred CCeEEEEeCCChhHHHH-H----HHHHHCCC
Q 031899 104 HDEIIVGCQSGKRSMMA-A----TDLLNAGF 129 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~-~----~~L~~~G~ 129 (151)
-.+|+++|++|..++.+ + ..|.+.|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 45799999999654443 3 34556787
No 172
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.06 E-value=19 Score=22.33 Aligned_cols=29 Identities=14% Similarity=0.088 Sum_probs=19.2
Q ss_pred EEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 108 IVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 108 v~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
|++|+.|.-...++..|.+.|+ +|.+++-
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~-~V~~id~ 37 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGK-KVLAVDK 37 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred EEEECCCHHHHHHHHHHHHCCC-eEEEEEC
Confidence 4445667666677788888887 4665553
No 173
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=53.72 E-value=23 Score=23.75 Aligned_cols=28 Identities=25% Similarity=0.340 Sum_probs=19.1
Q ss_pred CCCCeEEEEeCCC-hhHHH--HHHHHHHCCC
Q 031899 102 RKHDEIIVGCQSG-KRSMM--AATDLLNAGF 129 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~~--~~~~L~~~G~ 129 (151)
..+.+|+|+|..| .||.. +|..++..|.
T Consensus 115 ~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred hcCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 4578999999988 45543 4455566665
No 174
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=53.28 E-value=18 Score=30.88 Aligned_cols=38 Identities=13% Similarity=0.220 Sum_probs=32.5
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
.+.++++|+|.+-..+..++..|+..|+. +.+|.|...
T Consensus 458 ~~gqpvLVft~Sie~sE~Ls~~L~~~Gi~-~~vLnak~~ 495 (922)
T 1nkt_A 458 AKGQPVLIGTTSVERSEYLSRQFTKRRIP-HNVLNAKYH 495 (922)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHTTCC-CEEECSSCH
T ss_pred hcCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 35789999999999999999999999994 677888754
No 175
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=53.16 E-value=12 Score=22.99 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=18.0
Q ss_pred CCeEEEEeCCChhHHH-HH----HHHHHCCCC
Q 031899 104 HDEIIVGCQSGKRSMM-AA----TDLLNAGFA 130 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~-~~----~~L~~~G~~ 130 (151)
..+|++.|++|..++. ++ ..+.+.|++
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 3579999999955443 34 355667874
No 176
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=52.69 E-value=19 Score=25.54 Aligned_cols=49 Identities=10% Similarity=0.123 Sum_probs=34.2
Q ss_pred cCCCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE---cc----ccHHHHHhCCCCC
Q 031899 101 FRKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---IA----GGFAAWRQNGLPT 149 (151)
Q Consensus 101 ~~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~---l~----GG~~~W~~~g~pv 149 (151)
+.++++|+++.+ +|.....++..|++.|.+.+.+ ++ +|.+...+.|.|+
T Consensus 146 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~ 204 (243)
T 3dez_A 146 VTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKL 204 (243)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCE
T ss_pred cCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCE
Confidence 346788888864 7888888999999999864432 23 3455565667664
No 177
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=52.68 E-value=19 Score=23.82 Aligned_cols=33 Identities=12% Similarity=-0.032 Sum_probs=26.2
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
.++++|+++.+ +|.....++..|++.|.+.|.+
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~ 153 (180)
T 1zn8_A 118 EPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLEC 153 (180)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEE
Confidence 35778888864 7888888999999999876553
No 178
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=52.26 E-value=13 Score=26.54 Aligned_cols=38 Identities=11% Similarity=0.043 Sum_probs=30.0
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHC-CCCceeEccccHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNA-GFAGITDIAGGFA 140 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~-G~~~v~~l~GG~~ 140 (151)
..+.++||||+.-.....+...|... |+ .+..++|+..
T Consensus 110 ~~~~kvlIFs~~~~~~~~l~~~L~~~~g~-~~~~l~G~~~ 148 (271)
T 1z5z_A 110 DEGDKIAIFTQFVDMGKIIRNIIEKELNT-EVPFLYGELS 148 (271)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHHHCS-CCCEECTTSC
T ss_pred hCCCeEEEEeccHHHHHHHHHHHHHhcCC-cEEEEECCCC
Confidence 35678999999887788888899874 98 4777888863
No 179
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=51.45 E-value=19 Score=24.00 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=25.7
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
++++|+++++ +|.....++..|++.|-+.|.+
T Consensus 97 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 131 (185)
T 2geb_A 97 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 131 (185)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888864 7888888999999999877653
No 180
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=51.04 E-value=4 Score=28.12 Aligned_cols=20 Identities=10% Similarity=0.183 Sum_probs=17.6
Q ss_pred ccccCccccccccccccccC
Q 031899 7 QQRCDNIGFISSKILSFCPK 26 (151)
Q Consensus 7 ~~~~~~v~~l~gg~~~w~~~ 26 (151)
..+|++|.+|.||+..|...
T Consensus 144 ~~G~~~V~~L~GG~~~W~~~ 163 (211)
T 1qb0_A 144 SLYYPEMYILKGGYKEFFPQ 163 (211)
T ss_dssp CCSCCCEEEETTHHHHHTTT
T ss_pred hcCCCeEEEECCHHHHHHHH
Confidence 35899999999999999775
No 181
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=50.93 E-value=28 Score=23.21 Aligned_cols=33 Identities=6% Similarity=-0.031 Sum_probs=26.4
Q ss_pred ccCCCCeEEEEeCCChh--HHHHHHHHHHCCCCce
Q 031899 100 RFRKHDEIIVGCQSGKR--SMMAATDLLNAGFAGI 132 (151)
Q Consensus 100 ~~~~~~~iv~~c~~g~~--a~~~~~~L~~~G~~~v 132 (151)
.+.+.+.++++|++|.. ...+|..+++.|.+-|
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vI 108 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYS 108 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEE
Confidence 67788899999999854 4578889999998633
No 182
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=50.48 E-value=25 Score=25.91 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=27.4
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeEcc
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
+++.++++++ +|.....++..|++.|.+.|+.+.
T Consensus 216 ~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 4677888864 788888999999999998877554
No 183
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=50.36 E-value=66 Score=22.94 Aligned_cols=106 Identities=20% Similarity=0.138 Sum_probs=59.8
Q ss_pred CCccccCHHHHHHHHhCCCEEE-ecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCC-
Q 031899 37 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG- 114 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~ii-DvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g- 114 (151)
+.+..+|...++.+.+.++++. |.+-..+...-.-+++.-+... .....+..+.+......++.|++.+...
T Consensus 31 Gd~~~LT~~A~~~L~~AdvV~~~~~~~~~~ll~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~g~~Vv~L~~GDP 104 (285)
T 1cbf_A 31 GDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVLKTA------GMHLEEMVGTMLDRMREGKMVVRVHTGDP 104 (285)
T ss_dssp SCGGGSCHHHHHHHHHCSEEEECTTTSCHHHHTTSCTTCEEEECT------TCCHHHHHHHHHHHHTTTCCEEEEESBCT
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHhcCCCCEEEecC------CCCHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 3456789988888888887777 6654444332222344333221 0111233444445455567777777532
Q ss_pred ---hhHHHHHHHHHHCCCCceeEcccc---HHHHHhCCCCC
Q 031899 115 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 149 (151)
Q Consensus 115 ---~~a~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~pv 149 (151)
.+.......|.+.|+ .+.++-|= ..+....|.|+
T Consensus 105 ~i~g~~~~l~~~l~~~gi-~veviPGiSS~~aa~a~~G~pl 144 (285)
T 1cbf_A 105 AMYGAIMEQMVLLKREGV-DIEIVPGVTSVFAAAAAAEAEL 144 (285)
T ss_dssp TTTCCCHHHHHHHHHTTC-EEEEECCCCHHHHHHHHTTCCS
T ss_pred cccccHHHHHHHHHHCCC-cEEEECCchHHHHHHHHcCCCc
Confidence 344566777888887 57777762 22445567775
No 184
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=49.81 E-value=21 Score=23.66 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=25.6
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
++++|+++.+ +|.....++..|++.|-+.|.+
T Consensus 94 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~ 128 (183)
T 1hgx_A 94 EGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKV 128 (183)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888864 7888888999999999876653
No 185
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=49.28 E-value=37 Score=19.78 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=25.7
Q ss_pred CCCCeEEEEeCCC---hhHHHHHHHHHHCCCCceeEcc
Q 031899 102 RKHDEIIVGCQSG---KRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 102 ~~~~~iv~~c~~g---~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
.++.+|++.++.. .+-..+...|+..|+.++.+..
T Consensus 55 ~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l~t 92 (99)
T 2pfu_A 55 KKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVG 92 (99)
T ss_dssp CCSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEECTT
T ss_pred CCCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 4567788888866 3455677788999999987643
No 186
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=49.27 E-value=22 Score=23.85 Aligned_cols=48 Identities=13% Similarity=0.048 Sum_probs=33.3
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCCceeEc---c----ccHHHHHhCCCCC
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI---A----GGFAAWRQNGLPT 149 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l---~----GG~~~W~~~g~pv 149 (151)
.++++|+++.+ +|.....++..|++.|.+.|.++ + +|.....+.|.|+
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~~~~~ 175 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRV 175 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTCCE
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchhhhHHhcCCcE
Confidence 36788888875 78888889999999998765432 2 3444444556554
No 187
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=48.35 E-value=23 Score=23.57 Aligned_cols=32 Identities=9% Similarity=0.023 Sum_probs=25.9
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCCcee
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~ 133 (151)
.++++|+++.+ +|.....++..|++.|.+.|.
T Consensus 120 ~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 154 (187)
T 1g2q_A 120 PAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLE 154 (187)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEE
Confidence 35778888864 788888899999999987655
No 188
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=48.01 E-value=27 Score=23.74 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=26.0
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeEc
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
++++|+++.+ +|.....++..|++.|-..|.+.
T Consensus 119 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~ 154 (208)
T 1wd5_A 119 KGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVA 154 (208)
T ss_dssp TTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4678888865 67788888999999998776643
No 189
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=48.00 E-value=21 Score=27.34 Aligned_cols=33 Identities=15% Similarity=0.027 Sum_probs=28.6
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
..++++||++-..+..++..|+..|+ ++..+.|
T Consensus 177 ~~~~lVF~~s~~~a~~l~~~L~~~~~-~v~~lhg 209 (440)
T 1yks_A 177 KRPTAWFLPSIRAANVMAASLRKAGK-SVVVLNR 209 (440)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTC-CEEECCS
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCC-CEEEecc
Confidence 56799999998889999999999998 5777877
No 190
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=47.88 E-value=4.1 Score=28.37 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=16.4
Q ss_pred ccCccccccccccccccC
Q 031899 9 RCDNIGFISSKILSFCPK 26 (151)
Q Consensus 9 ~~~~v~~l~gg~~~w~~~ 26 (151)
+|++|.+|.||+.+|...
T Consensus 159 Gf~~V~~L~GG~~aW~~~ 176 (216)
T 3op3_A 159 YYPELYILKGGYRDFFPE 176 (216)
T ss_dssp SCCCEEEETTHHHHHTTT
T ss_pred CCCcEEEECCcHHHHHHh
Confidence 789999999999999874
No 191
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=47.61 E-value=23 Score=24.01 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=25.6
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
++++|+++++ +|.....++..|++.|-+.|.+
T Consensus 117 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 151 (205)
T 1yfz_A 117 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 151 (205)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888864 7888888999999999877653
No 192
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=47.42 E-value=19 Score=22.80 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=22.2
Q ss_pred eEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccHH
Q 031899 106 EIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 106 ~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+|+|+|... -||..|...|+...-+++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 588888765 57776666676654345666655543
No 193
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=47.19 E-value=38 Score=20.19 Aligned_cols=8 Identities=25% Similarity=0.551 Sum_probs=3.1
Q ss_pred HHHHHCCC
Q 031899 122 TDLLNAGF 129 (151)
Q Consensus 122 ~~L~~~G~ 129 (151)
..|...||
T Consensus 23 ~~L~~~g~ 30 (129)
T 3h1g_A 23 NTLSRLGY 30 (129)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 33333343
No 194
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=46.94 E-value=14 Score=24.04 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=23.2
Q ss_pred CeEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
..|+|+|... -||..|...|+...-+++.+...|.
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt 56 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGT 56 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEeccc
Confidence 4688889765 5777777777766544555555554
No 195
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=46.75 E-value=48 Score=21.82 Aligned_cols=42 Identities=14% Similarity=0.242 Sum_probs=31.7
Q ss_pred HHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCcee
Q 031899 91 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 91 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~ 133 (151)
...++.....+.++..+++.+............|++.|| ++.
T Consensus 122 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~-~~~ 163 (204)
T 3e05_A 122 EEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY-MVE 163 (204)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC-EEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC-cee
Confidence 456677777788888888887766666678889999998 443
No 196
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=46.54 E-value=25 Score=23.24 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=25.2
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCC-CCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G-~~~v~~ 134 (151)
++++|+++.+ +|.....++..|++.| .+.|.+
T Consensus 95 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~ 130 (181)
T 1ufr_A 95 TGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYL 130 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 4678888864 7888888999999999 776653
No 197
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=46.52 E-value=28 Score=27.26 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=24.9
Q ss_pred HhccCCCCeEEEEeCCCh---hHHHHHHHHHHCCCCceeEc
Q 031899 98 STRFRKHDEIIVGCQSGK---RSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 98 ~~~~~~~~~iv~~c~~g~---~a~~~~~~L~~~G~~~v~~l 135 (151)
.+.+++.++|+++|+.|+ ..-.+++.|... + +|.++
T Consensus 40 ~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~-~-~V~v~ 78 (475)
T 3k5w_A 40 LQNASLGAKVIILCGSGDNGGDGYALARRLVGR-F-RVLVF 78 (475)
T ss_dssp HTTSCTTCEEEEEECSSHHHHHHHHHHHHHBTT-B-EEEEE
T ss_pred HHHcCCCCeEEEEECCCCCHHHHHHHHHHHHcC-C-ceEEE
Confidence 334566789999999874 455678888866 6 45543
No 198
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=46.48 E-value=26 Score=23.06 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=30.0
Q ss_pred HHHHHhccCCCCeEEEEeCCC--hhHHHHHHHHHH---CCCCceeEccccH
Q 031899 94 VEEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AGFAGITDIAGGF 139 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g--~~a~~~~~~L~~---~G~~~v~~l~GG~ 139 (151)
-+.+.+.++++ .+|+.|..| ..|...|..|.. .| .++..+-||-
T Consensus 57 ~~~il~~i~~~-~vi~Ld~~Gk~~sS~~fA~~l~~~~~~g-~~i~FvIGG~ 105 (155)
T 1ns5_A 57 GEQMLAAAGKN-RIVTLDIPGKPWDTPQLAAELERWKLDG-RDVSLLIGGP 105 (155)
T ss_dssp HHHHHHHHTTS-EEEEEEEEEECCCHHHHHHHHHHHHHHC-SCEEEEECBT
T ss_pred HHHHHHhcCCC-cEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 34455556665 577777776 567778877765 47 6888888875
No 199
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=45.91 E-value=31 Score=26.68 Aligned_cols=34 Identities=18% Similarity=0.130 Sum_probs=27.8
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeEcc
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
++++|+++.+ +|.....++..|++.|-+.|+++.
T Consensus 337 ~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~ 373 (459)
T 1ao0_A 337 EGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKI 373 (459)
T ss_dssp TTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 4678999886 688888899999999998777543
No 200
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=45.76 E-value=26 Score=24.30 Aligned_cols=32 Identities=3% Similarity=-0.044 Sum_probs=26.0
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
+++.|+++.+ +|.....++..|++.|-..|.+
T Consensus 102 ~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v 136 (220)
T 1tc1_A 102 EGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKT 136 (220)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888864 7888888999999999877664
No 201
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=45.48 E-value=32 Score=22.91 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=25.8
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCC--cee
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFA--GIT 133 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~--~v~ 133 (151)
.+++.|+++.+ +|.....++..|++.|.. .|.
T Consensus 115 ~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~ 151 (186)
T 1l1q_A 115 GPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIY 151 (186)
T ss_dssp CTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEE
Confidence 35778888875 788888899999999987 655
No 202
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=45.22 E-value=27 Score=23.90 Aligned_cols=32 Identities=13% Similarity=0.032 Sum_probs=25.9
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
++++|+++.+ +|.....++..|++.|-+.|.+
T Consensus 117 ~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v 151 (211)
T 1pzm_A 117 ENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKT 151 (211)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEE
Confidence 5678888864 7888888999999999876653
No 203
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=45.16 E-value=27 Score=27.21 Aligned_cols=30 Identities=13% Similarity=0.067 Sum_probs=23.3
Q ss_pred cCCCCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 101 FRKHDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 101 ~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
+.+.++|++....|..|..++..|++.|++
T Consensus 7 l~~~~KVvVA~SGGlDSSvll~~L~e~G~e 36 (455)
T 1k92_A 7 LPVGQRIGIAFSGGLDTSAALLWMRQKGAV 36 (455)
T ss_dssp CCTTSEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred hcCCCeEEEEEcChHHHHHHHHHHHHcCCE
Confidence 456677888778888888888888888884
No 204
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=45.09 E-value=42 Score=19.11 Aligned_cols=7 Identities=14% Similarity=-0.382 Sum_probs=2.8
Q ss_pred HHHHCCC
Q 031899 123 DLLNAGF 129 (151)
Q Consensus 123 ~L~~~G~ 129 (151)
.+....+
T Consensus 40 ~l~~~~~ 46 (119)
T 2j48_A 40 QLDLLQP 46 (119)
T ss_dssp HHHHHCC
T ss_pred HHHhcCC
Confidence 3344344
No 205
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=44.57 E-value=38 Score=23.57 Aligned_cols=32 Identities=25% Similarity=0.217 Sum_probs=24.5
Q ss_pred CCeEEEEeC---CChhHHHHHHHHHHCCCCceeEc
Q 031899 104 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 104 ~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
++.++++++ +|.....+...|++.|.++++++
T Consensus 136 gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~~ 170 (221)
T 1o5o_A 136 DKEVFLLDPMLATGVSSIKAIEILKENGAKKITLV 170 (221)
T ss_dssp TCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEE
Confidence 556777753 78888888899999998877654
No 206
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=44.34 E-value=14 Score=24.27 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=24.4
Q ss_pred CeEEEEeCCC-hhHHHHHHHHH----HCCCCceeEccccHHHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLL----NAGFAGITDIAGGFAAW 142 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~----~~G~~~v~~l~GG~~~W 142 (151)
..|+|+|... -||..|...|+ +.|..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 4688999765 46665554444 44665566777777666
No 207
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=44.24 E-value=28 Score=22.95 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=25.2
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCC-CCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G-~~~v~~ 134 (151)
++++|+++.+ +|.....++..|++.| ...|.+
T Consensus 97 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~ 132 (181)
T 1a3c_A 97 TDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQL 132 (181)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 4678888864 7888888999999997 776653
No 208
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=44.13 E-value=31 Score=24.86 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=25.8
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
+++.++++.+ +|.....++..|++.|.+.|+.
T Consensus 204 ~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~ 238 (284)
T 1u9y_A 204 KDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIA 238 (284)
T ss_dssp TTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEE
Confidence 4577888764 7888888999999999987763
No 209
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=43.85 E-value=33 Score=25.53 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=31.7
Q ss_pred HHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCcee-Ecccc
Q 031899 92 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGIT-DIAGG 138 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~-~l~GG 138 (151)
+.+..+.... +.++++||++-..+..++..|...|+. +. .+.|.
T Consensus 242 ~~l~~~l~~~--~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~h~~ 286 (414)
T 3oiy_A 242 EKLVELLEIF--RDGILIFAQTEEEGKELYEYLKRFKFN-VGETWSEF 286 (414)
T ss_dssp HHHHHHHHHH--CSSEEEEESSHHHHHHHHHHHHHTTCC-EEESSSCH
T ss_pred HHHHHHHHHc--CCCEEEEECCHHHHHHHHHHHHHcCCc-eehhhcCc
Confidence 3344444442 467899999988899999999999984 55 66653
No 210
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=43.84 E-value=31 Score=27.71 Aligned_cols=34 Identities=9% Similarity=0.111 Sum_probs=26.8
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHC------CCCceeEcccc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNA------GFAGITDIAGG 138 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~------G~~~v~~l~GG 138 (151)
+.++||||.+-..+..++..|.+. |+ ++..+.|+
T Consensus 400 ~~~~IVF~~s~~~~~~l~~~L~~~~~l~~~g~-~~~~lhg~ 439 (699)
T 4gl2_A 400 SARGIIFTKTRQSAYALSQWITENEKFAEVGV-KAHHLIGA 439 (699)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHSSCSCC------CEECCCS
T ss_pred CCcEEEEECcHHHHHHHHHHHHhCccccccCc-ceEEEECC
Confidence 678999999988888999999987 87 57778887
No 211
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=43.09 E-value=59 Score=20.26 Aligned_cols=43 Identities=5% Similarity=0.086 Sum_probs=27.9
Q ss_pred HHHHHHHhccCCCCeEEEEeCC----ChhHHHHHHHHHHCCCCceeE
Q 031899 92 KFVEEVSTRFRKHDEIIVGCQS----GKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~c~~----g~~a~~~~~~L~~~G~~~v~~ 134 (151)
+.+-.....++.++++.+++.- ...-......|++.||.++++
T Consensus 7 ~qivd~il~~~egtri~iLAPvv~~rKg~~~~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 7 EQMVDRLLSYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVRI 53 (119)
T ss_dssp HHHHHHHHTSCTTCEEEEEEEEEEEECSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEEEEeeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 4444444456778888777641 223346788899999987764
No 212
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=43.04 E-value=15 Score=24.17 Aligned_cols=38 Identities=21% Similarity=0.385 Sum_probs=24.0
Q ss_pred CeEEEEeCCC-hhHHHHHHHHHH----CCCC-ceeEccccHHHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLLN----AGFA-GITDIAGGFAAW 142 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~~----~G~~-~v~~l~GG~~~W 142 (151)
.+|+|+|... -||..|...|+. .|.. ++.+...|..+|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 4788999765 466655554443 3543 466777777766
No 213
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=42.38 E-value=16 Score=23.96 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=26.1
Q ss_pred CCeEEEEeCCC-hhHHHHHHHHHH----CCC-CceeEccccHHHHH
Q 031899 104 HDEIIVGCQSG-KRSMMAATDLLN----AGF-AGITDIAGGFAAWR 143 (151)
Q Consensus 104 ~~~iv~~c~~g-~~a~~~~~~L~~----~G~-~~v~~l~GG~~~W~ 143 (151)
..+|+|+|... -||..+...|+. .|. +++.+...|...|.
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCc
Confidence 34789999765 466655555544 365 36777777877763
No 214
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=42.37 E-value=46 Score=21.00 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=23.1
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
..+|+ +|+.|.-...++..|...|+ +|.+++-
T Consensus 19 ~~~v~-IiG~G~iG~~la~~L~~~g~-~V~vid~ 50 (155)
T 2g1u_A 19 SKYIV-IFGCGRLGSLIANLASSSGH-SVVVVDK 50 (155)
T ss_dssp CCEEE-EECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcEE-EECCCHHHHHHHHHHHhCCC-eEEEEEC
Confidence 44444 45778888889999999998 5776643
No 215
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=42.02 E-value=46 Score=19.85 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=24.6
Q ss_pred HHHhccCCCCeEEEEeCC------ChhHHHHHHHHHHCCCC
Q 031899 96 EVSTRFRKHDEIIVGCQS------GKRSMMAATDLLNAGFA 130 (151)
Q Consensus 96 ~~~~~~~~~~~iv~~c~~------g~~a~~~~~~L~~~G~~ 130 (151)
.....+-...+|++|..+ ...+.++-..|.+.|.+
T Consensus 9 ~~v~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~ 49 (109)
T 3ipz_A 9 DTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVP 49 (109)
T ss_dssp HHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCC
Confidence 333333345678888874 57788889999999875
No 216
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=41.87 E-value=50 Score=21.88 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=25.4
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 142 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W 142 (151)
...|+++.+.......+...|...||..|.....|-.++
T Consensus 61 ~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~~~eal 99 (206)
T 3mm4_A 61 GKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEAL 99 (206)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESSHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCCHHHHH
Confidence 345666655555566677788888886666666665554
No 217
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=41.79 E-value=33 Score=23.33 Aligned_cols=48 Identities=13% Similarity=0.162 Sum_probs=32.2
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCCcee---Ecc----ccHHHHHhCCCCC
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT---DIA----GGFAAWRQNGLPT 149 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~---~l~----GG~~~W~~~g~pv 149 (151)
.++++|+++.+ +|.....++..|++.|.+.+. +++ +|.+...+.|.|+
T Consensus 115 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~ 172 (211)
T 2aee_A 115 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKL 172 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCE
T ss_pred CCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCE
Confidence 35778888864 788888899999999987643 222 3444444445553
No 218
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=41.63 E-value=56 Score=19.57 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=22.5
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 142 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W 142 (151)
..+|+++.+...........|...|| ++.....+-.++
T Consensus 15 ~~~ilivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~al 52 (138)
T 2b4a_A 15 PFRVTLVEDEPSHATLIQYHLNQLGA-EVTVHPSGSAFF 52 (138)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC-EEEEESSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCC-EEEEeCCHHHHH
Confidence 44555554454555566777777787 466555555554
No 219
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=41.40 E-value=5.6 Score=30.58 Aligned_cols=36 Identities=17% Similarity=0.341 Sum_probs=0.0
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
..++++||++-..+..++..|...|+ ++..+.|++.
T Consensus 333 ~~~~lvF~~s~~~~~~l~~~L~~~~~-~v~~lh~~~~ 368 (479)
T 3fmp_B 333 IAQAMIFCHTRKTASWLAAELSKEGH-QVALLSGEMM 368 (479)
T ss_dssp -------------------------------------
T ss_pred CCceEEEeCcHHHHHHHHHHHHhCCc-cEEEecCCCC
Confidence 45789999998888899999999998 5888888864
No 220
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=41.30 E-value=53 Score=19.26 Aligned_cols=20 Identities=20% Similarity=0.425 Sum_probs=8.3
Q ss_pred HHHHHHHHCCCCceeEcccc
Q 031899 119 MAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 119 ~~~~~L~~~G~~~v~~l~GG 138 (151)
.....|...||..+.....|
T Consensus 19 ~l~~~l~~~~~~~v~~~~~~ 38 (128)
T 1jbe_A 19 IVRNLLKELGFNNVEEAEDG 38 (128)
T ss_dssp HHHHHHHHTTCCCEEEESSH
T ss_pred HHHHHHHHcCCcEEEeeCCH
Confidence 34444444454334333333
No 221
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=41.20 E-value=37 Score=20.56 Aligned_cols=24 Identities=25% Similarity=0.271 Sum_probs=12.3
Q ss_pred eCCChhHHHHHHHHHHCCCCceeEc
Q 031899 111 CQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 111 c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
|+.|.-...++..|.+.|+ +|.++
T Consensus 10 iG~G~iG~~~a~~L~~~g~-~v~~~ 33 (140)
T 1lss_A 10 AGIGRVGYTLAKSLSEKGH-DIVLI 33 (140)
T ss_dssp ECCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred ECCCHHHHHHHHHHHhCCC-eEEEE
Confidence 3445555555555555554 34444
No 222
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=41.19 E-value=30 Score=21.91 Aligned_cols=34 Identities=21% Similarity=0.007 Sum_probs=21.5
Q ss_pred eEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccH
Q 031899 106 EIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 106 ~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
.|+|+|... -||..|...|+...-.++.+...|.
T Consensus 5 ~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt 39 (139)
T 1jl3_A 5 IIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGI 39 (139)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcC
Confidence 588888765 5777666666665433555555554
No 223
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=41.07 E-value=40 Score=26.41 Aligned_cols=33 Identities=12% Similarity=0.068 Sum_probs=27.3
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCceeEc
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
++++|+++.+ +|.....++..|++.|-+.|++.
T Consensus 358 ~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~ 393 (504)
T 1ecf_A 358 RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLA 393 (504)
T ss_dssp TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEE
Confidence 4678999876 68888889999999999887754
No 224
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=40.98 E-value=39 Score=20.95 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=21.8
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHH
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 142 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W 142 (151)
+|+++.+...-...+...|++.||+-+..-..|-+++
T Consensus 10 rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl 46 (123)
T 2lpm_A 10 RVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEAL 46 (123)
T ss_dssp CEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 4666666555555667777777875333444555544
No 225
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=40.91 E-value=35 Score=24.98 Aligned_cols=82 Identities=12% Similarity=0.271 Sum_probs=39.2
Q ss_pred CHHHHHHHHh----CCCEEEecCChhhHhcCCCC-CceeeccccccCCCCCCCHHHHHHH----Hhcc--CCCCeEEEEe
Q 031899 43 PVRVAHELLQ----AGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEEV----STRF--RKHDEIIVGC 111 (151)
Q Consensus 43 ~~~~~~~~~~----~~~~iiDvR~~~e~~~ghIp-gAi~ip~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~iv~~c 111 (151)
....+..+++ ....|+++.+...|...... .-.++|+.+. ..++.+.+... ...+ +++.+|+|+|
T Consensus 43 ~i~~Vv~~l~~~~~~~~~v~nl~~e~~y~~~~~~~~~~~~~~~D~----~~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC 118 (324)
T 1d5r_A 43 NIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFEDH----NPPQLELIKPFCEDLDQWLSEDDNHVAAIHC 118 (324)
T ss_dssp BHHHHHHHHHHHSSSCEEEEEEESSCCCCTTSCSSCEEEEEECTT----SCCCHHHHHHHHHHHHHHHTTTSCSEEEEEC
T ss_pred CHHHHHHHHHhcCCCcEEEEEcCCCCCCChHHhCCeEEEEeecCC----CCCcHHHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence 3444444443 34778888654334433332 2345665321 12222333222 2222 3467999999
Q ss_pred CCC-hhHH-HHHHHHHHCC
Q 031899 112 QSG-KRSM-MAATDLLNAG 128 (151)
Q Consensus 112 ~~g-~~a~-~~~~~L~~~G 128 (151)
..| .|+. .++..|...+
T Consensus 119 ~aG~gRTGt~ia~yL~~~~ 137 (324)
T 1d5r_A 119 KAGKGRTGVMICAYLLHRG 137 (324)
T ss_dssp SSSSHHHHHHHHHHHHHHT
T ss_pred CCCCChhHHHHHHHHHHhc
Confidence 988 4543 3444444333
No 226
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=40.88 E-value=6.8 Score=26.58 Aligned_cols=39 Identities=26% Similarity=0.316 Sum_probs=25.3
Q ss_pred CCeEEEEeCCC-hhHHHHHHHHHH----CCCCceeEccccHHHHH
Q 031899 104 HDEIIVGCQSG-KRSMMAATDLLN----AGFAGITDIAGGFAAWR 143 (151)
Q Consensus 104 ~~~iv~~c~~g-~~a~~~~~~L~~----~G~~~v~~l~GG~~~W~ 143 (151)
..+|+|+|... -||..|...|+. .|. ++.+...|..+|.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 35799999865 467665555544 342 5777777777663
No 227
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=40.71 E-value=30 Score=26.31 Aligned_cols=35 Identities=17% Similarity=0.011 Sum_probs=29.4
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
..+++++|++-..+..++..|++.|+ ++..+.|+.
T Consensus 171 ~~~~lVF~~~~~~~~~l~~~L~~~~~-~v~~lhg~~ 205 (431)
T 2v6i_A 171 DGRTVWFVHSIKQGAEIGTCLQKAGK-KVLYLNRKT 205 (431)
T ss_dssp SSCEEEECSSHHHHHHHHHHHHHTTC-CEEEESTTT
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCC-eEEEeCCcc
Confidence 44688999998889899999999997 688888864
No 228
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=40.33 E-value=24 Score=24.27 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=36.1
Q ss_pred HHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCC--CCceeEcc
Q 031899 91 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAG--FAGITDIA 136 (151)
Q Consensus 91 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G--~~~v~~l~ 136 (151)
...+......+.++..+++++............|++.| |..+..+.
T Consensus 174 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 174 ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEE
Confidence 45677777778788888988887777777888999999 98776654
No 229
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=39.95 E-value=39 Score=22.55 Aligned_cols=31 Identities=16% Similarity=0.053 Sum_probs=25.1
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~ 133 (151)
++++++++. .+|.....++..|++.|-+.++
T Consensus 94 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 127 (181)
T 2ywu_A 94 HGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVR 127 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEE
Confidence 467888876 4888888899999999987655
No 230
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=39.81 E-value=50 Score=21.23 Aligned_cols=42 Identities=7% Similarity=0.065 Sum_probs=30.5
Q ss_pred HHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeE
Q 031899 92 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
..+..+...+ ++..+++.+........+...|++.||+.+.+
T Consensus 105 ~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 105 EVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp HHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEE
Confidence 4566666667 67777777766666777888999999975443
No 231
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=39.73 E-value=13 Score=29.01 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=27.5
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
...++++||++-..+..++..|.+.|+ .+..+.|++.
T Consensus 356 ~~~~~LVF~~s~~~a~~l~~~L~~~~~-~v~~~hg~~~ 392 (508)
T 3fho_A 356 TIGQSIIFCKKKDTAEEIARRMTADGH-TVACLTGNLE 392 (508)
T ss_dssp -CCCEEEBCSSTTTTTHHHHHHTTTTC-CCCEEC----
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhCCC-cEEEEeCCCC
Confidence 456789999998888899999999998 5778888764
No 232
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=39.53 E-value=29 Score=26.27 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=20.5
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
+..+|++-...|..|+.++..|++.||+
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~~G~~ 43 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQQGYQ 43 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHTTCCE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHcCCe
Confidence 3456777777777888888888888874
No 233
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=39.31 E-value=59 Score=19.17 Aligned_cols=24 Identities=8% Similarity=0.008 Sum_probs=11.0
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCC
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
+|+++.+...........|...||
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~ 32 (130)
T 3eod_A 9 QILIVEDEQVFRSLLDSWFSSLGA 32 (130)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCc
Confidence 344444443334444455555555
No 234
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=39.28 E-value=43 Score=24.05 Aligned_cols=18 Identities=22% Similarity=0.575 Sum_probs=13.2
Q ss_pred CCCCeEEEEeCCC-hhHHH
Q 031899 102 RKHDEIIVGCQSG-KRSMM 119 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~~ 119 (151)
..+.||||+|..| .|+..
T Consensus 207 ~~~~PivVHCsaGvGRTGt 225 (287)
T 2b49_A 207 VDSEPVLVHCSAGIGRTGV 225 (287)
T ss_dssp CTTCCEEEECSSSSHHHHH
T ss_pred cCCCcEEEEcCCCCcHHHH
Confidence 3468999999987 45443
No 235
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=39.08 E-value=27 Score=19.99 Aligned_cols=26 Identities=15% Similarity=0.069 Sum_probs=21.5
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHC
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNA 127 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~ 127 (151)
..+.+|++.|+++..+..+...+++.
T Consensus 48 AGDDTIlvi~r~~~~a~~l~~~i~~l 73 (78)
T 1xxa_A 48 AGDDTIFTTPANGFTVKDLYEAILEL 73 (78)
T ss_dssp ECSSEEEEEECTTCCHHHHHHHHHTT
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHHH
Confidence 46789999999999888888888654
No 236
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=38.70 E-value=74 Score=22.20 Aligned_cols=84 Identities=13% Similarity=0.128 Sum_probs=41.9
Q ss_pred cCHHHHHHHHh---CC-CEEEecCCh------hhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhcc----C--CCC
Q 031899 42 VPVRVAHELLQ---AG-HRYLDVRTP------EEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF----R--KHD 105 (151)
Q Consensus 42 i~~~~~~~~~~---~~-~~iiDvR~~------~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~----~--~~~ 105 (151)
.+++++.+.++ .+ ..|||++.. ..|...+|. -+++|+.+ .+..++.+.+......+ . ++.
T Consensus 67 ~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi~-y~~~p~~D---~~~~P~~~~l~~~~~~i~~~~~~~~~~ 142 (241)
T 2c46_A 67 FHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIK-YIKLQCKG---HGECPTTENTETFIRLCERFNERNPPE 142 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTCE-EEECCCCC---TTCCCCHHHHHHHHHHHTTC-----CE
T ss_pred CCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCCE-EEEEecCC---CCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence 45777655543 24 679999864 233322221 22344321 01233444444444332 2 347
Q ss_pred eEEEEeCCC-hhHH-HHHHHH-HHCCC
Q 031899 106 EIIVGCQSG-KRSM-MAATDL-LNAGF 129 (151)
Q Consensus 106 ~iv~~c~~g-~~a~-~~~~~L-~~~G~ 129 (151)
+|+|.|..| .|+. .++..| +..|+
T Consensus 143 ~VlVHC~aG~gRTGt~ia~yLm~~~~~ 169 (241)
T 2c46_A 143 LIGVHCTHGFNRTGFLICAFLVEKMDW 169 (241)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHTTCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 899999988 4544 344444 44565
No 237
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=38.47 E-value=35 Score=25.72 Aligned_cols=27 Identities=26% Similarity=0.441 Sum_probs=22.0
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
..+|++....|..|+.++..|++.|++
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G~~ 35 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQGYD 35 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcCCc
Confidence 457777778888888899999999984
No 238
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=38.46 E-value=25 Score=19.67 Aligned_cols=25 Identities=20% Similarity=0.369 Sum_probs=20.7
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLN 126 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~ 126 (151)
..+.+|++.|+++..+..+...+++
T Consensus 45 AGDDTIlvi~r~~~~a~~l~~~i~~ 69 (71)
T 1b4b_A 45 CGDDTCLIICRTPKDAKKVSNQLLS 69 (71)
T ss_dssp ECSSEEEEEESSHHHHHHHHHHHHT
T ss_pred eeCCEEEEEECCHHHHHHHHHHHHH
Confidence 4688999999999888888887764
No 239
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=38.44 E-value=35 Score=26.21 Aligned_cols=33 Identities=18% Similarity=0.019 Sum_probs=27.8
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
..++++||++-..+..++..|+..|+ ++..|.|
T Consensus 190 ~~~~LVF~~s~~~~~~l~~~L~~~g~-~v~~lh~ 222 (459)
T 2z83_A 190 AGKTVWFVASVKMGNEIAMCLQRAGK-KVIQLNR 222 (459)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTC-CEEEEST
T ss_pred CCCEEEEeCChHHHHHHHHHHHhcCC-cEEecCH
Confidence 45789999998889999999999998 5666765
No 240
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=38.34 E-value=6.6 Score=28.88 Aligned_cols=36 Identities=17% Similarity=0.320 Sum_probs=0.0
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
..++++||++-..+..++..|+..|+ ++..+.|++.
T Consensus 259 ~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 294 (394)
T 1fuu_A 259 VTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDLP 294 (394)
T ss_dssp -------------------------------------
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCC-eEEEeeCCCC
Confidence 45789999998888889999999888 5777888764
No 241
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=38.28 E-value=47 Score=22.70 Aligned_cols=31 Identities=10% Similarity=0.025 Sum_probs=25.0
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+++.|+++. .+|.....++..|++.|-+.+.
T Consensus 115 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 148 (204)
T 3hvu_A 115 EGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVK 148 (204)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEE
Confidence 467888876 4788888899999999987655
No 242
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=37.52 E-value=40 Score=23.21 Aligned_cols=31 Identities=10% Similarity=0.117 Sum_probs=23.6
Q ss_pred CCeEEEEeC---CChhHHHHHHHHHHCCCCceeE
Q 031899 104 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 104 ~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
++.++++++ +|.....+...|++.|.+++++
T Consensus 121 ~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 154 (208)
T 2e55_A 121 GKIVVILDPMLATGGTLEVALREILKHSPLKVKS 154 (208)
T ss_dssp TSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 456777754 7888888889999999877664
No 243
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=37.46 E-value=41 Score=23.20 Aligned_cols=31 Identities=6% Similarity=0.063 Sum_probs=25.1
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+++.|+++.+ +|.....+...|++.|-+.|.
T Consensus 133 ~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~ 166 (225)
T 2jbh_A 133 AGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIK 166 (225)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888864 788888899999999987665
No 244
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=37.44 E-value=43 Score=22.21 Aligned_cols=32 Identities=13% Similarity=0.010 Sum_probs=25.3
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
++++|+++. .+|.....++..|++.|-+.+.+
T Consensus 90 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~ 124 (177)
T 3ohp_A 90 KGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRI 124 (177)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEE
Confidence 467888876 47888888999999999876553
No 245
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=37.40 E-value=67 Score=23.18 Aligned_cols=17 Identities=24% Similarity=0.563 Sum_probs=12.9
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+...||||+|..| .|+.
T Consensus 220 ~~~~PivVHCsaGvGRTG 237 (297)
T 1jln_A 220 EGRGPVVVHCSAGIGRTG 237 (297)
T ss_dssp TTSCCEEEESSSSSHHHH
T ss_pred CCCCCEEEEeCCCchhhH
Confidence 4578999999987 4544
No 246
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=37.39 E-value=32 Score=26.28 Aligned_cols=36 Identities=14% Similarity=-0.015 Sum_probs=30.1
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
..+++++|++-..+..++..|++.|+ ++..+.|...
T Consensus 188 ~~~~lVF~~s~~~a~~l~~~L~~~g~-~~~~lh~~~~ 223 (451)
T 2jlq_A 188 QGKTVWFVPSIKAGNDIANCLRKSGK-RVIQLSRKTF 223 (451)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHTTTC-CEEEECTTTH
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHcCC-eEEECCHHHH
Confidence 45789999998889999999999998 5777877654
No 247
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=37.29 E-value=83 Score=22.90 Aligned_cols=16 Identities=31% Similarity=0.609 Sum_probs=12.3
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||.|..| .|+.
T Consensus 232 ~~~PIvVHCsaGvGRTG 248 (309)
T 1zc0_A 232 HPGPIVVHCSAGIGRTG 248 (309)
T ss_dssp SCCCEEEEESSSSHHHH
T ss_pred CCCCEEEEeCCCcchhH
Confidence 467999999987 4544
No 248
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=37.16 E-value=41 Score=23.13 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=25.0
Q ss_pred CCeEEEEeC---CChhHHHHHHHHHHCCCCceeEc
Q 031899 104 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 104 ~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
++.++++++ +|.....+...|++.|.++++++
T Consensus 123 ~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~ 157 (208)
T 1v9s_A 123 ERRAFLLDPMLATGGSASLALSLLKERGATGVKLM 157 (208)
T ss_dssp GSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEE
Confidence 467777754 78888889999999998877643
No 249
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=37.15 E-value=58 Score=23.57 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=18.3
Q ss_pred CCCHHHHHHHHhc---cCCCCeEEEEeCCC-hhHH
Q 031899 88 TKNLKFVEEVSTR---FRKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 88 ~~~~~~~~~~~~~---~~~~~~iv~~c~~g-~~a~ 118 (151)
..+...+..+... ...+.|+||+|..| .|+.
T Consensus 203 P~~~~~~l~~~~~v~~~~~~~PivVHCsaGvGRTG 237 (306)
T 3m4u_A 203 PESAASFDELLSVIKNCVTTSPILVHCSAGIGRTG 237 (306)
T ss_dssp CSCHHHHHHHHHHHHTCCCSSCEEEECSSSSHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCCEEEEcCCCCcchh
Confidence 3344444444433 23468999999987 4544
No 250
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=37.06 E-value=66 Score=19.35 Aligned_cols=23 Identities=22% Similarity=0.183 Sum_probs=10.1
Q ss_pred EEEEeCCChhHHHHHHHHHHCCC
Q 031899 107 IIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 107 iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
|+++.+.......+...|...||
T Consensus 8 ilivdd~~~~~~~l~~~L~~~g~ 30 (140)
T 3h5i_A 8 ILIVEDSKFQAKTIANILNKYGY 30 (140)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC
Confidence 33333333333344445555555
No 251
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=37.04 E-value=45 Score=24.73 Aligned_cols=33 Identities=27% Similarity=0.208 Sum_probs=26.4
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCceeEc
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+++.++++. .+|.....++..|++.|-+.++.+
T Consensus 212 ~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~ 247 (326)
T 3s5j_B 212 KDRVAILVDDMADTCGTICHAADKLLSAGATRVYAI 247 (326)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEE
Confidence 466777775 578888899999999999877744
No 252
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=36.91 E-value=43 Score=23.28 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=25.2
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+++.|+++.+ +|.....+...|++.|-+.|.
T Consensus 141 ~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~ 174 (233)
T 1fsg_A 141 RDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMR 174 (233)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888864 788888899999999987655
No 253
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=36.91 E-value=4.8 Score=26.03 Aligned_cols=38 Identities=8% Similarity=-0.014 Sum_probs=21.5
Q ss_pred CeEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccHHHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAAW 142 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~~W 142 (151)
.+|+|+|... -||..+...|+...-+++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 3578888654 4665555555554333344555565555
No 254
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=36.83 E-value=50 Score=24.36 Aligned_cols=33 Identities=12% Similarity=0.022 Sum_probs=26.6
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCceeEc
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+++.++++. .+|.....++..|++.|-+.|+.+
T Consensus 215 ~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~ 250 (319)
T 3dah_A 215 EGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAY 250 (319)
T ss_dssp CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEE
Confidence 467788875 578888899999999999887744
No 255
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=36.76 E-value=75 Score=22.19 Aligned_cols=112 Identities=14% Similarity=0.133 Sum_probs=56.8
Q ss_pred CCccccCHHHHHHHHhCCCEEEe-cCC----hhhHhcCCC-----CCceee----ccccccCCCCCCCHHHHHHHHhccC
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLD-VRT----PEEFSAGHA-----TGAINV----PYMYRVGSGMTKNLKFVEEVSTRFR 102 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiD-vR~----~~e~~~ghI-----pgAi~i----p~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
+.+..+|...++.+.+.++++.| .|. ..+.....+ +++.-+ |...........-.+..+.+...+.
T Consensus 15 G~~~~LT~~A~~~L~~advV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 94 (259)
T 2e0n_A 15 GDPGLITVKALSQLREADVIYYPGTVSASGAVTSVALDILKEFDLDPSKLRGMLVPMSRSRGAAEASYAANYASMAEEVQ 94 (259)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEEEEEECTTCCEECHHHHHHTTTTCCGGGEEEEEEECC---------CGGGHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCEEEEeccccccccHHHHHHHHHHhcCCCCCEEEeeccCCccchhhhHHHHHHHHHHHHHHHH
Confidence 34567898888888888888887 221 111111111 233222 2211000000001123344444444
Q ss_pred CCCeEEEEeCCC----hhHHHHHHHHHHCCCCceeEcccc--H-HHHHhCCCCC
Q 031899 103 KHDEIIVGCQSG----KRSMMAATDLLNAGFAGITDIAGG--F-AAWRQNGLPT 149 (151)
Q Consensus 103 ~~~~iv~~c~~g----~~a~~~~~~L~~~G~~~v~~l~GG--~-~~W~~~g~pv 149 (151)
.++.|++.+.+. .+.......+.+.|+ .+.++-|= + .+....|.|+
T Consensus 95 ~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi-~v~viPGiSs~~aa~a~~G~pl 147 (259)
T 2e0n_A 95 AGRRVAVVSVGDGGFYSTASAIIERARRDGL-DCSMTPGIPAFIAAGSAAGMPL 147 (259)
T ss_dssp TTCEEEEEESBCTTBSCTHHHHHHHHHTTTC-CEEEECCCCHHHHHHHHTTCCS
T ss_pred CCCeEEEEeCCCCcccccHHHHHHHHHHCCC-CEEEeCChhHHHHHHHhcCCCC
Confidence 566777776432 345567788888887 57777762 2 2445567776
No 256
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=36.62 E-value=69 Score=20.37 Aligned_cols=32 Identities=25% Similarity=0.469 Sum_probs=20.4
Q ss_pred HHHHHHHHHHCCCCceeEccccHHHHHh-CCCCCC
Q 031899 117 SMMAATDLLNAGFAGITDIAGGFAAWRQ-NGLPTE 150 (151)
Q Consensus 117 a~~~~~~L~~~G~~~v~~l~GG~~~W~~-~g~pv~ 150 (151)
....+..|.++||+ ++. .+|...|.+ +|+|++
T Consensus 39 l~~~a~~l~~lGf~-i~A-T~GTa~~L~~~Gi~v~ 71 (143)
T 2yvq_A 39 FLGVAEQLHNEGFK-LFA-TEATSDWLNANNVPAT 71 (143)
T ss_dssp HHHHHHHHHTTTCE-EEE-EHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHCCCE-EEE-CchHHHHHHHcCCeEE
Confidence 44577888899993 443 356555544 677764
No 257
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=36.60 E-value=51 Score=23.61 Aligned_cols=18 Identities=28% Similarity=0.373 Sum_probs=13.4
Q ss_pred cCCCCeEEEEeCCC-hhHH
Q 031899 101 FRKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 101 ~~~~~~iv~~c~~g-~~a~ 118 (151)
.+...|+||+|..| .|+.
T Consensus 203 ~~~~~PivVHCsaGvGRTG 221 (288)
T 4grz_A 203 LPHAGPIIVHSSAGIGRTG 221 (288)
T ss_dssp STTCCCEEEECSSSSHHHH
T ss_pred cCCCCcEEEEeCCCCcHHH
Confidence 35578999999987 4544
No 258
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=36.57 E-value=44 Score=23.30 Aligned_cols=32 Identities=6% Similarity=0.053 Sum_probs=25.8
Q ss_pred CCCCeEEEEeC---CChhHHHHHHHHHHCCCCcee
Q 031899 102 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 102 ~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~ 133 (151)
.++++|+++.+ +|.....++..|++.|.+.+.
T Consensus 136 ~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~ 170 (236)
T 1qb7_A 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVE 170 (236)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEE
Confidence 46788888864 788888899999999987554
No 259
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=36.57 E-value=29 Score=19.85 Aligned_cols=25 Identities=20% Similarity=0.129 Sum_probs=20.7
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLN 126 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~ 126 (151)
..+.+|++.|.+...+..+...|.+
T Consensus 53 AGDDTIlvi~r~~~~a~~l~~~l~~ 77 (79)
T 2zfz_A 53 AGDDTILVVAREPTTGAQLAGMFEN 77 (79)
T ss_dssp ECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHh
Confidence 4688999999999888888877765
No 260
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=36.52 E-value=47 Score=29.01 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=35.8
Q ss_pred HHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHC--CCCceeEccccHH
Q 031899 94 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNA--GFAGITDIAGGFA 140 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~--G~~~v~~l~GG~~ 140 (151)
...+...+..+..++++|++-..+..++..|++. |+ ++..+.|++.
T Consensus 802 ~~~il~~l~~g~qvlvf~~~v~~~~~l~~~L~~~~p~~-~v~~lhg~~~ 849 (1151)
T 2eyq_A 802 REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEA-RIAIGHGQMR 849 (1151)
T ss_dssp HHHHHHHHTTTCEEEEECCCSSCHHHHHHHHHHHCTTS-CEEECCSSCC
T ss_pred HHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHhCCCC-eEEEEeCCCC
Confidence 4445555667788999999988888899999887 65 6888998864
No 261
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=36.46 E-value=28 Score=22.45 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=23.1
Q ss_pred CeEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
++|+|+|... -||..|...|+... .++.+...|..
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~ 44 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVG 44 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETT
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEecccc
Confidence 3689999765 57777777777654 23556666654
No 262
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=36.33 E-value=39 Score=21.94 Aligned_cols=29 Identities=17% Similarity=-0.011 Sum_probs=20.1
Q ss_pred EEEeCCChhHHHHHHHHHHC-CCCceeEccc
Q 031899 108 IVGCQSGKRSMMAATDLLNA-GFAGITDIAG 137 (151)
Q Consensus 108 v~~c~~g~~a~~~~~~L~~~-G~~~v~~l~G 137 (151)
|++|+.|.-...++..|.+. |+ +|.+++-
T Consensus 42 v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~ 71 (183)
T 3c85_A 42 VLILGMGRIGTGAYDELRARYGK-ISLGIEI 71 (183)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCS-CEEEEES
T ss_pred EEEECCCHHHHHHHHHHHhccCC-eEEEEEC
Confidence 34457777777788888888 87 4666643
No 263
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=36.27 E-value=46 Score=22.32 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=25.1
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+++.|+++. .+|.....+...|++.|-+.+.
T Consensus 93 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 126 (186)
T 3o7m_A 93 TGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALK 126 (186)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEE
Confidence 467888876 4788888899999999987655
No 264
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=36.23 E-value=67 Score=18.92 Aligned_cols=11 Identities=9% Similarity=-0.013 Sum_probs=4.7
Q ss_pred HHHHHHHHCCC
Q 031899 119 MAATDLLNAGF 129 (151)
Q Consensus 119 ~~~~~L~~~G~ 129 (151)
.....|.+.||
T Consensus 21 ~l~~~L~~~g~ 31 (132)
T 3lte_A 21 AIERVLKRDHW 31 (132)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCc
Confidence 34444444444
No 265
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=36.22 E-value=43 Score=27.81 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=31.2
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
..+.++||+|..-.....+...|...|+ ++..++|+..
T Consensus 570 ~~g~kvLIFsq~~~~ld~L~~~L~~~g~-~~~~i~G~~~ 607 (800)
T 3mwy_W 570 KDGHRVLIFSQMVRMLDILGDYLSIKGI-NFQRLDGTVP 607 (800)
T ss_dssp TTTCCEEEEESCHHHHHHHHHHHHHHTC-CCEEESTTSC
T ss_pred hCCCeEEEEechHHHHHHHHHHHHhCCC-CEEEEeCCCC
Confidence 4567899999987778888999999999 5777899864
No 266
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=36.16 E-value=70 Score=19.11 Aligned_cols=23 Identities=17% Similarity=0.224 Sum_probs=9.7
Q ss_pred EEEEeCCChhHHHHHHHHHHCCC
Q 031899 107 IIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 107 iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
|+++.+.......+...|...||
T Consensus 9 iLivdd~~~~~~~l~~~l~~~g~ 31 (140)
T 3grc_A 9 ILICEDDPDIARLLNLMLEKGGF 31 (140)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC
T ss_pred EEEEcCCHHHHHHHHHHHHHCCC
Confidence 33333333333344444444554
No 267
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination-DNA binding COM; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=35.88 E-value=32 Score=27.79 Aligned_cols=36 Identities=8% Similarity=0.085 Sum_probs=30.2
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
.+.++||+|+.-.....+...|...|+ .+..++|++
T Consensus 415 ~~~k~lIFs~~~~~~~~l~~~l~~~g~-~~~~l~G~~ 450 (644)
T 1z3i_X 415 TSDKVVLVSNYTQTLDLFEKLCRNRRY-LYVRLDGTM 450 (644)
T ss_dssp CCCEEEEEESCHHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred CCCEEEEEEccHHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 467899999988777888899999999 467789986
No 268
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=35.81 E-value=45 Score=22.57 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=24.7
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCC-CCcee
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G-~~~v~ 133 (151)
+++.|+++.+ +|.....++..|++.| .+.|.
T Consensus 111 ~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~ 145 (201)
T 1w30_A 111 DDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQ 145 (201)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEE
Confidence 4678888864 7888888999999999 77664
No 269
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=35.75 E-value=21 Score=25.13 Aligned_cols=46 Identities=9% Similarity=0.174 Sum_probs=34.5
Q ss_pred HHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 92 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
..+......+.++..+++++.+......+...|++.||..+..+.-
T Consensus 194 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 194 NYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp GTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEE
Confidence 5677777777778888888877666667788888999987665543
No 270
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=35.66 E-value=75 Score=21.08 Aligned_cols=44 Identities=9% Similarity=0.021 Sum_probs=32.0
Q ss_pred HHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeE
Q 031899 91 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 91 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
..++......+.++..+++.|+.......+...|.+.||..+..
T Consensus 136 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 136 KTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp HHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 46777777778888888888776555556777888889965443
No 271
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=35.40 E-value=49 Score=23.66 Aligned_cols=17 Identities=29% Similarity=0.356 Sum_probs=12.9
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+...||||+|..| .|+.
T Consensus 202 ~~~~pivVHCsaGvGRTG 219 (284)
T 1fpr_A 202 PHAGPIIVHSSAGIGRTG 219 (284)
T ss_dssp TTCCCEEEESSBSSHHHH
T ss_pred CCCCcEEEEcCCCCcHHH
Confidence 4578999999987 4544
No 272
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=35.29 E-value=40 Score=25.84 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=30.5
Q ss_pred cCCCCeEEEEeCCChhHHHHHHHHHHC-CCCceeEccccHH
Q 031899 101 FRKHDEIIVGCQSGKRSMMAATDLLNA-GFAGITDIAGGFA 140 (151)
Q Consensus 101 ~~~~~~iv~~c~~g~~a~~~~~~L~~~-G~~~v~~l~GG~~ 140 (151)
...+.+++++|..-..+..+...|... |+ ++..++|+..
T Consensus 338 ~~~~~k~lvF~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~ 377 (500)
T 1z63_A 338 LDEGDKIAIFTQFVDMGKIIRNIIEKELNT-EVPFLYGELS 377 (500)
T ss_dssp HTTTCCEEEECSCHHHHHHHHHHHHHHHTC-CCCEEETTSC
T ss_pred HccCCcEEEEEehHHHHHHHHHHHHHhhCC-CeEEEECCCC
Confidence 356778999999877777888888875 87 5777888863
No 273
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=34.93 E-value=40 Score=27.19 Aligned_cols=34 Identities=15% Similarity=0.028 Sum_probs=29.0
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
..++++||++-..+..++..|++.|+ ++..+.|.
T Consensus 355 ~~~~LVF~~s~~~a~~l~~~L~~~g~-~v~~lhg~ 388 (618)
T 2whx_A 355 QGKTVWFVPSIKAGNDIANCLRKSGK-RVIQLSRK 388 (618)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHHTTC-CEEEECTT
T ss_pred CCCEEEEECChhHHHHHHHHHHHcCC-cEEEEChH
Confidence 55799999999999999999999998 57777764
No 274
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=34.87 E-value=49 Score=22.78 Aligned_cols=31 Identities=16% Similarity=0.034 Sum_probs=24.8
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~ 133 (151)
++++|+++.+ +|.....++..|++.|.+.+.
T Consensus 124 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~ 157 (226)
T 2ps1_A 124 ENKRILIIDDVMTAGTAINEAFEIISNAKGQVVG 157 (226)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CcCEEEEEEecccChHHHHHHHHHHHHcCCeEEE
Confidence 5778888865 788888899999999986544
No 275
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=34.83 E-value=1e+02 Score=22.76 Aligned_cols=32 Identities=6% Similarity=0.101 Sum_probs=20.2
Q ss_pred CCCCHHHHHHHHh---ccCCCCeEEEEeCCCh-hHH
Q 031899 87 MTKNLKFVEEVST---RFRKHDEIIVGCQSGK-RSM 118 (151)
Q Consensus 87 ~~~~~~~~~~~~~---~~~~~~~iv~~c~~g~-~a~ 118 (151)
..+.++.+..+.. .++.+.+++|.|..|. |+.
T Consensus 193 ~aP~~e~id~fl~~v~~l~~~~~i~vHC~aG~GRTg 228 (314)
T 3mmj_A 193 VWPTPENIDRFLAFYRTLPQDAWLHFHSEAGVGRTT 228 (314)
T ss_dssp SCCCHHHHHHHHHHHHTCCTTCEEEEECSSSSHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCCCEEEECCCCCchHH
Confidence 3445555544443 3567789999999873 543
No 276
>2wv9_A Flavivirin protease NS2B regulatory subunit, FLAV protease NS3 catalytic subunit; nucleotide-binding, capsid protein; 2.75A {Murray valley encephalitis virus}
Probab=34.83 E-value=35 Score=27.88 Aligned_cols=35 Identities=20% Similarity=0.011 Sum_probs=29.6
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
...++++||++-..+..++..|+..|+ ++..+.|.
T Consensus 409 ~~~~~lVF~~s~~~~e~la~~L~~~g~-~v~~lHg~ 443 (673)
T 2wv9_A 409 YAGKTVWFVASVKMSNEIAQCLQRAGK-RVIQLNRK 443 (673)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCC-eEEEeChH
Confidence 466789999998888899999999998 57778774
No 277
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=34.80 E-value=84 Score=19.64 Aligned_cols=43 Identities=12% Similarity=0.087 Sum_probs=24.3
Q ss_pred HHHHHHhccCCCCeEEEEeCC-Chh-HHHHHHHHHHCCCCceeEccc
Q 031899 93 FVEEVSTRFRKHDEIIVGCQS-GKR-SMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~-g~~-a~~~~~~L~~~G~~~v~~l~G 137 (151)
.+.+..+.++.++.++++|+- |.. ...+...+.+ ..++.++.|
T Consensus 47 ~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~~~~--~~~v~vi~G 91 (135)
T 1pdo_A 47 KYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVD--KEHYEVIAG 91 (135)
T ss_dssp HHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHHHTT--CTTEEEEES
T ss_pred HHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHhc--cCCEEEEeC
Confidence 344445556666678888885 433 3334444433 347877765
No 278
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=34.71 E-value=91 Score=21.64 Aligned_cols=29 Identities=14% Similarity=0.163 Sum_probs=23.4
Q ss_pred EEEEeCCChhHHHHHHHHHHCCCC--ceeEc
Q 031899 107 IIVGCQSGKRSMMAATDLLNAGFA--GITDI 135 (151)
Q Consensus 107 iv~~c~~g~~a~~~~~~L~~~G~~--~v~~l 135 (151)
++++|.+...+.-+...|++.|.+ ++.++
T Consensus 199 ~~i~~~nD~~A~g~~~al~~~g~~v~di~vv 229 (306)
T 8abp_A 199 WLIVGMNDSTVLGGVRATEGQGFKAADIIGI 229 (306)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCCCCceEEE
Confidence 368898888888899999999995 66654
No 279
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=34.63 E-value=57 Score=21.95 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=24.9
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
+++|+|...+|.-...++..|.+.|+ +|..+.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~ 52 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGH-EPVAMV 52 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCC-eEEEEE
Confidence 56777777788777788899989998 576654
No 280
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=34.37 E-value=94 Score=22.66 Aligned_cols=17 Identities=35% Similarity=0.608 Sum_probs=12.9
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
....||||+|..| .|+.
T Consensus 237 ~~~~PivVHCsaGvGRTG 254 (315)
T 1wch_A 237 HRSGPIITHCSAGIGRSG 254 (315)
T ss_dssp CCSSCEEEECSSSSHHHH
T ss_pred CCCCCEEEEcCCCCcHHH
Confidence 4578999999987 4544
No 281
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=34.25 E-value=45 Score=22.95 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=24.3
Q ss_pred CCeEEEEe---CCChhHHHHHHHHHHCCCCceeEc
Q 031899 104 HDEIIVGC---QSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 104 ~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
++.+++++ .+|.....+...|++.|.+++.++
T Consensus 123 ~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~~~ 157 (208)
T 2ehj_A 123 ERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVL 157 (208)
T ss_dssp GCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEE
Confidence 45677775 478888888899999998876643
No 282
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=34.08 E-value=54 Score=20.49 Aligned_cols=36 Identities=19% Similarity=0.012 Sum_probs=22.5
Q ss_pred CeEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
..|+|+|... -||..|...|+...-.++.+...|..
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 40 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIE 40 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESS
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCC
Confidence 3588888765 57776666676653245666665554
No 283
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=33.92 E-value=57 Score=19.73 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=19.9
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
++++ ++.|.-...++..|.+.|+ +|.+++-
T Consensus 8 ~v~I-~G~G~iG~~~a~~l~~~g~-~v~~~d~ 37 (144)
T 2hmt_A 8 QFAV-IGLGRFGGSIVKELHRMGH-EVLAVDI 37 (144)
T ss_dssp SEEE-ECCSHHHHHHHHHHHHTTC-CCEEEES
T ss_pred cEEE-ECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3444 4557777778888888887 4666554
No 284
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=33.89 E-value=32 Score=22.79 Aligned_cols=36 Identities=25% Similarity=0.217 Sum_probs=24.9
Q ss_pred CeEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccHHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAA 141 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~~ 141 (151)
.+|+|+|... -||..|...|+... .++.+...|..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 3799999866 58877777777654 346666666643
No 285
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=33.79 E-value=88 Score=22.78 Aligned_cols=17 Identities=24% Similarity=0.526 Sum_probs=13.0
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+...||||.|..| .|+.
T Consensus 237 ~~~~PivVHCsaGvGRTG 254 (316)
T 3b7o_A 237 MDAGPVVVHCSAGIGRTG 254 (316)
T ss_dssp TTCCCEEEEESSSSHHHH
T ss_pred CCCCCEEEEcCCCCcHHH
Confidence 4678999999987 4544
No 286
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=33.77 E-value=30 Score=19.97 Aligned_cols=25 Identities=20% Similarity=0.344 Sum_probs=20.6
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLN 126 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~ 126 (151)
..+.+|++.|.++..+..+...+++
T Consensus 57 AGDDTIlvi~r~~~~a~~l~~~l~~ 81 (83)
T 2p5m_A 57 CGDDTILIICRTPEDTEGVKNRLLE 81 (83)
T ss_dssp ECSSEEEEECSSHHHHHHHHHHHHT
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHH
Confidence 4688999999999888888877764
No 287
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=33.72 E-value=77 Score=18.87 Aligned_cols=36 Identities=8% Similarity=-0.121 Sum_probs=21.0
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
..+|+++.+.......+...|...|| ++.....+-.
T Consensus 18 ~~~ilivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~ 53 (137)
T 2pln_A 18 SMRVLLIEKNSVLGGEIEKGLNVKGF-MADVTESLED 53 (137)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTC-EEEEESCHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCc-EEEEeCCHHH
Confidence 44566655555555566677777777 4554444433
No 288
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=33.55 E-value=56 Score=24.19 Aligned_cols=17 Identities=29% Similarity=0.563 Sum_probs=12.8
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+.+.||||+|..| .|+.
T Consensus 235 ~~~~PiVVHCSAGvGRTG 252 (342)
T 3i36_A 235 PPESPILVHCSAGVGRTG 252 (342)
T ss_dssp CSSCCEEEESSSSSHHHH
T ss_pred CCCCCEEEEcCCCChHHH
Confidence 4578999999987 4544
No 289
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=33.31 E-value=44 Score=23.23 Aligned_cols=50 Identities=26% Similarity=0.326 Sum_probs=26.0
Q ss_pred HhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 66 FSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 66 ~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
...|||.+.-.+|+. -.+ .+++++|+ +.|.-+.+.+..|.+.|. +|.+++
T Consensus 12 ~~~~~~~~~~~~Pif------------------l~L-~gk~VLVV-GgG~va~~ka~~Ll~~GA-~VtVva 61 (223)
T 3dfz_A 12 HSSGHIEGRHMYTVM------------------LDL-KGRSVLVV-GGGTIATRRIKGFLQEGA-AITVVA 61 (223)
T ss_dssp ----------CCEEE------------------ECC-TTCCEEEE-CCSHHHHHHHHHHGGGCC-CEEEEC
T ss_pred cccCcccccCccccE------------------EEc-CCCEEEEE-CCCHHHHHHHHHHHHCCC-EEEEEC
Confidence 346888888888873 112 24555554 667777778888888887 577664
No 290
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=33.30 E-value=77 Score=18.78 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=17.1
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
.|+++.+.......+...|...|| ++.....+-.
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~ 42 (136)
T 3hdv_A 9 LVLVVDDNAVNREALILYLKSRGI-DAVGADGAEE 42 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC-CEEEESSHHH
T ss_pred eEEEECCCHHHHHHHHHHHHHcCc-eEEEeCCHHH
Confidence 444444444444455666666666 3444444433
No 291
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=32.95 E-value=80 Score=18.84 Aligned_cols=32 Identities=22% Similarity=0.354 Sum_probs=14.8
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
+|+++.+...........|...|| +|.....+
T Consensus 9 ~iLivdd~~~~~~~l~~~L~~~g~-~v~~~~~~ 40 (142)
T 3cg4_A 9 DVMIVDDDAHVRIAVKTILSDAGF-HIISADSG 40 (142)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC-EEEEESSH
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCe-EEEEeCCH
Confidence 344444444444445555555555 34433333
No 292
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=32.50 E-value=62 Score=23.44 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=25.6
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
+++.++++. .+|.....++..|++.|-+.++.
T Consensus 202 ~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 236 (286)
T 3lrt_A 202 NGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYV 236 (286)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEE
T ss_pred CcCEEEEEeccccccHHHHHHHHHHHhCCCCEEEE
Confidence 467788875 57888889999999999887653
No 293
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.50 E-value=82 Score=18.86 Aligned_cols=6 Identities=0% Similarity=-0.269 Sum_probs=2.3
Q ss_pred HHHCCC
Q 031899 124 LLNAGF 129 (151)
Q Consensus 124 L~~~G~ 129 (151)
+....+
T Consensus 44 ~~~~~~ 49 (136)
T 3t6k_A 44 IYKNLP 49 (136)
T ss_dssp HHHSCC
T ss_pred HHhCCC
Confidence 334333
No 294
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=32.29 E-value=1.3e+02 Score=25.18 Aligned_cols=36 Identities=14% Similarity=0.053 Sum_probs=27.7
Q ss_pred CCCeEEEEeCCC----hhHHHHHHHHHHCCCCceeEcccc
Q 031899 103 KHDEIIVGCQSG----KRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 103 ~~~~iv~~c~~g----~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
.+-.+|.+|... .....+...|++.|..++.++.||
T Consensus 654 ~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG 693 (762)
T 2xij_A 654 ADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGG 693 (762)
T ss_dssp TTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred cCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 355688888642 245568889999999889999998
No 295
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.15 E-value=79 Score=19.44 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=10.4
Q ss_pred EEEEeCCChhHHHHHHHHHHCCC
Q 031899 107 IIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 107 iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
|+++.+.......+...|...||
T Consensus 10 ILivdd~~~~~~~l~~~L~~~g~ 32 (154)
T 3gt7_A 10 ILIVEDSPTQAEHLKHILEETGY 32 (154)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHCCC
Confidence 44443333334444455555555
No 296
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=32.12 E-value=45 Score=22.89 Aligned_cols=31 Identities=6% Similarity=0.012 Sum_probs=24.4
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+++.|+++.+ +|.....+...|++.|-+.+.
T Consensus 125 ~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~ 158 (217)
T 1z7g_A 125 TGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVK 158 (217)
T ss_dssp TTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888864 677788888999999987655
No 297
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=31.86 E-value=94 Score=22.59 Aligned_cols=16 Identities=31% Similarity=0.663 Sum_probs=12.2
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||+|..| .|+.
T Consensus 208 ~~~PivVHCsaGvGRTG 224 (314)
T 1l8k_A 208 DHGPAVIHCSAGIGRSG 224 (314)
T ss_dssp TSCCEEEEESSSSSHHH
T ss_pred CCCcEEEEcCCCCcHHH
Confidence 467999999987 4544
No 298
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=31.85 E-value=59 Score=24.59 Aligned_cols=32 Identities=19% Similarity=-0.010 Sum_probs=26.1
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCceeE
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
+++.+|++. .+|.....++..|++.|-+.|+.
T Consensus 271 ~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 305 (379)
T 2ji4_A 271 GGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV 305 (379)
T ss_dssp TTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEE
Confidence 467788875 47888889999999999987764
No 299
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=31.63 E-value=96 Score=19.39 Aligned_cols=44 Identities=5% Similarity=0.081 Sum_probs=25.7
Q ss_pred HHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 93 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.+.+....++.++-|++.++-|.-...+.....+.+. ++.++.|
T Consensus 50 ~i~~~i~~~d~~~GVLiL~DmGSp~n~a~~l~~~~~~-~v~vI~g 93 (130)
T 3gx1_A 50 KLKQTVVKLNPVKGVLILSDMGSLTSFGNILTEELGI-RTKTVTM 93 (130)
T ss_dssp HHHHHHHTSCCTTCEEEEECSGGGGTHHHHHHHHHCC-CEEEECS
T ss_pred HHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHHhcCC-CEEEEeC
Confidence 3444455567677788888876444433434444354 5777765
No 300
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=31.59 E-value=38 Score=22.38 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=23.4
Q ss_pred CeEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
++|+|+|... -||..|...|+... .++.+...|..
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~ 58 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH-PELKVESAGLG 58 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETT
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecC
Confidence 3789999765 57877777777654 24666666664
No 301
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=31.57 E-value=97 Score=19.85 Aligned_cols=45 Identities=11% Similarity=0.058 Sum_probs=24.4
Q ss_pred HHHHHHhccCCCCeEEEEeCC--ChhHHHHHHHHHHCC---CCceeEccc
Q 031899 93 FVEEVSTRFRKHDEIIVGCQS--GKRSMMAATDLLNAG---FAGITDIAG 137 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~--g~~a~~~~~~L~~~G---~~~v~~l~G 137 (151)
.+......++.+..|+++|+- |.-...+...+...+ ..++.++.|
T Consensus 47 ~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~~~~~~~~~~~~v~vI~G 96 (150)
T 3ipr_A 47 QIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVINELEPALQKKIFVVSG 96 (150)
T ss_dssp HHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHHHTTSCHHHHTTEEEEES
T ss_pred HHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHhhhhccCCCEEEEeC
Confidence 344444556666778888884 433333444443321 136777765
No 302
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=31.51 E-value=47 Score=22.40 Aligned_cols=24 Identities=29% Similarity=0.396 Sum_probs=14.3
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCC
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
++++.+.+|..|..++..|.+.|+
T Consensus 8 kv~v~~SGG~DS~~ll~ll~~~g~ 31 (203)
T 3k32_A 8 DVHVLFSGGKDSSLSAVILKKLGY 31 (203)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTTE
T ss_pred eEEEEEECcHHHHHHHHHHHHcCC
Confidence 455555566666666666666665
No 303
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=31.41 E-value=97 Score=22.36 Aligned_cols=16 Identities=38% Similarity=0.609 Sum_probs=12.2
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||+|..| .|+.
T Consensus 223 ~~~PivVHCsaGvGRTG 239 (301)
T 2i1y_A 223 RSCPIIVHCSDGAGRTG 239 (301)
T ss_dssp SSCCEEEECSSSSHHHH
T ss_pred CCCCEEEEECCCCchhH
Confidence 457999999987 4544
No 304
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=31.37 E-value=77 Score=22.85 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=18.1
Q ss_pred CCCHHHHHHHHhcc---CCCCeEEEEeCCC-hhHH
Q 031899 88 TKNLKFVEEVSTRF---RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 88 ~~~~~~~~~~~~~~---~~~~~iv~~c~~g-~~a~ 118 (151)
..+...+..+...+ ....|+||+|..| .|+.
T Consensus 200 P~~~~~~l~~~~~v~~~~~~~PivVHCsaGvGRTG 234 (302)
T 4az1_A 200 PQSATSLEALLTNVKNSPTTVPVVVHCSAGIGRTG 234 (302)
T ss_dssp CSCHHHHHHHHHHHHHSCTTSCEEEESSSSSSHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCEEEECCCCCcHHH
Confidence 33444444444432 2467999999987 4544
No 305
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=31.37 E-value=67 Score=17.49 Aligned_cols=28 Identities=14% Similarity=0.006 Sum_probs=15.9
Q ss_pred eCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 111 CQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 111 c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
+.....-..++..+.+.++..+-+.++|
T Consensus 5 v~p~~tv~ea~~~M~~~~i~~~~V~d~~ 32 (70)
T 3ghd_A 5 VQPKDTVDRVAKILSRNKAGSAVVMEGD 32 (70)
T ss_dssp ECTTCBHHHHHHHHHHTTCSEEEEEETT
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEECC
Confidence 3444445566666777666555555543
No 306
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=31.26 E-value=85 Score=18.65 Aligned_cols=38 Identities=5% Similarity=-0.049 Sum_probs=29.2
Q ss_pred HHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 93 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
.....+..+..+..+.|..+.......+..+++..||+
T Consensus 42 ~tkkaL~~l~~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~ 79 (98)
T 1jdq_A 42 ETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHE 79 (98)
T ss_dssp HHHHHHHTCCTTCEEEEEESSCTHHHHHHHHHHHSSCC
T ss_pred HHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 34556667778888888888776666788899999995
No 307
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=31.06 E-value=16 Score=23.98 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=23.5
Q ss_pred CeEEEEeCCC-hhHHHHHHHHH----HCCC-CceeEccccHHHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLL----NAGF-AGITDIAGGFAAW 142 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~----~~G~-~~v~~l~GG~~~W 142 (151)
..|+|+|... -||..|...|+ +.|. +++.+...|..+|
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 48 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSY 48 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCT
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCc
Confidence 4688889765 46655444443 4555 3566777777666
No 308
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}
Probab=31.06 E-value=1.2e+02 Score=22.15 Aligned_cols=16 Identities=38% Similarity=0.783 Sum_probs=12.1
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||+|..| .|+.
T Consensus 251 ~~~PivVHCsaGvGRTG 267 (325)
T 2bzl_A 251 RHPPIVVHCSAGVGRTG 267 (325)
T ss_dssp CCCCEEEESSSSSHHHH
T ss_pred CCCCEEEEeCCCCcHHH
Confidence 467999999987 4543
No 309
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=30.83 E-value=82 Score=18.31 Aligned_cols=14 Identities=0% Similarity=-0.197 Sum_probs=5.8
Q ss_pred HHHHHCCCCceeEcc
Q 031899 122 TDLLNAGFAGITDIA 136 (151)
Q Consensus 122 ~~L~~~G~~~v~~l~ 136 (151)
..+....+ ++.+++
T Consensus 40 ~~~~~~~~-dlii~D 53 (120)
T 3f6p_A 40 EMVEELQP-DLILLD 53 (120)
T ss_dssp HHHHTTCC-SEEEEE
T ss_pred HHHhhCCC-CEEEEe
Confidence 33444444 344443
No 310
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=30.72 E-value=15 Score=24.05 Aligned_cols=38 Identities=16% Similarity=-0.010 Sum_probs=24.5
Q ss_pred CeEEEEeCCC-hhHHHHHHHHH----HCCCC-c-eeEccccHHHH
Q 031899 105 DEIIVGCQSG-KRSMMAATDLL----NAGFA-G-ITDIAGGFAAW 142 (151)
Q Consensus 105 ~~iv~~c~~g-~~a~~~~~~L~----~~G~~-~-v~~l~GG~~~W 142 (151)
.+|+|+|... -||..|-..|+ +.|.. + +.+...|..+|
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC
Confidence 4699999765 46665554444 34653 3 67777777766
No 311
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=30.64 E-value=88 Score=22.64 Aligned_cols=39 Identities=13% Similarity=0.281 Sum_probs=25.9
Q ss_pred cCCCCeEEEEeCCChhHHHHHHHHHHC----CCCcee--EccccH
Q 031899 101 FRKHDEIIVGCQSGKRSMMAATDLLNA----GFAGIT--DIAGGF 139 (151)
Q Consensus 101 ~~~~~~iv~~c~~g~~a~~~~~~L~~~----G~~~v~--~l~GG~ 139 (151)
+.++.++++-+.+|..|..++..|.+. |++++. .++-|+
T Consensus 21 ~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~ 65 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHML 65 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCS
T ss_pred CCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCC
Confidence 456678888888888888877777764 664233 344443
No 312
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=30.62 E-value=21 Score=24.54 Aligned_cols=45 Identities=7% Similarity=-0.010 Sum_probs=33.9
Q ss_pred HHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 92 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
..+......+.++..+++++............|++.||..+..++
T Consensus 179 ~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 179 KVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp GGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEE
Confidence 567777777777888888887766666777888889997666554
No 313
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=30.40 E-value=89 Score=20.99 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=23.0
Q ss_pred CCeEEEEeCCC----hhHHHHHHHHHHCCCCceeEcc
Q 031899 104 HDEIIVGCQSG----KRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 104 ~~~iv~~c~~g----~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
..+|++.|-.| .-...++..|+..|| +|..|.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~-~v~~LG 123 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGF-TVYNLG 123 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTC-EEEECC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCC-EEEECC
Confidence 45788888655 345578889999999 466553
No 314
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=30.37 E-value=28 Score=25.65 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=30.3
Q ss_pred HHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 91 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 91 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.+.+..+.....++..++.||..| .+-+.|++.|| .|.-..|
T Consensus 206 ~e~f~~l~~~~~pgg~laTYtaag----~VRR~L~~aGF-~V~k~~G 247 (308)
T 3vyw_A 206 LDFLSLIKERIDEKGYWVSYSSSL----SVRKSLLTLGF-KVGSSRE 247 (308)
T ss_dssp HHHHHHHHTTEEEEEEEEESCCCH----HHHHHHHHTTC-EEEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEEeCcH----HHHHHHHHCCC-EEEecCC
Confidence 456666666667788899998875 35567999999 4665554
No 315
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=30.35 E-value=71 Score=25.60 Aligned_cols=34 Identities=6% Similarity=-0.120 Sum_probs=26.0
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCC----CCceeEccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAG----FAGITDIAG 137 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G----~~~v~~l~G 137 (151)
++.+++|||++-..+..++..|...| + ++..+.|
T Consensus 397 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~-~~~~l~G 434 (696)
T 2ykg_A 397 PETITILFVKTRALVDALKNWIEGNPKLSFL-KPGILTG 434 (696)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHCTTCCSC-CEEC---
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCcccc-ceeEEEc
Confidence 46789999999888999999999998 5 4555644
No 316
>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription factor, RNA polymerase recycling, activator, ATP-binding, DNA-binding; 3.20A {Escherichia coli K12}
Probab=30.34 E-value=54 Score=28.00 Aligned_cols=38 Identities=13% Similarity=0.309 Sum_probs=31.1
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHH-CCCCceeEccccHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLN-AGFAGITDIAGGFA 140 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~-~G~~~v~~l~GG~~ 140 (151)
.++.++++||++-..+..++..|.. .|+ ++..+.|++.
T Consensus 501 ~~~~k~iVF~~~~~~~~~l~~~L~~~~g~-~~~~lhG~~~ 539 (968)
T 3dmq_A 501 HRSQKVLVICAKAATALQLEQVLREREGI-RAAVFHEGMS 539 (968)
T ss_dssp TSSSCCCEECSSTHHHHHHHHHHHTTTCC-CEEEECTTSC
T ss_pred CCCCCEEEEeCcHHHHHHHHHHHHHHcCC-cEEEEeCCCC
Confidence 3567889999998888899999984 698 5888999863
No 317
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=30.22 E-value=60 Score=19.51 Aligned_cols=28 Identities=7% Similarity=-0.120 Sum_probs=20.7
Q ss_pred CCCeEEEEeC------CChhHHHHHHHHHHCCCC
Q 031899 103 KHDEIIVGCQ------SGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 103 ~~~~iv~~c~------~g~~a~~~~~~L~~~G~~ 130 (151)
.+.+||+|.. ....+..+-..|.+.|.+
T Consensus 14 ~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~ 47 (111)
T 3zyw_A 14 HAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQ 47 (111)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred hcCCEEEEEecCCCCCcchhHHHHHHHHHHcCCC
Confidence 3567888875 336677888899999874
No 318
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.17 E-value=90 Score=19.04 Aligned_cols=23 Identities=4% Similarity=-0.112 Sum_probs=9.8
Q ss_pred EEEEeCCChhHHHHHHHHHHCCC
Q 031899 107 IIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 107 iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
|+++++...........|...||
T Consensus 10 iLivdd~~~~~~~l~~~L~~~g~ 32 (154)
T 2rjn_A 10 VMLVDDEQPILNSLKRLIKRLGC 32 (154)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC
T ss_pred EEEEcCCHHHHHHHHHHHHHcCC
Confidence 33333333333344444444454
No 319
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=30.08 E-value=88 Score=18.45 Aligned_cols=11 Identities=0% Similarity=-0.185 Sum_probs=4.3
Q ss_pred HHHCCCCceeEc
Q 031899 124 LLNAGFAGITDI 135 (151)
Q Consensus 124 L~~~G~~~v~~l 135 (151)
+....+ ++.++
T Consensus 43 ~~~~~~-dlvl~ 53 (136)
T 1mvo_A 43 AETEKP-DLIVL 53 (136)
T ss_dssp HHHHCC-SEEEE
T ss_pred HhhcCC-CEEEE
Confidence 333344 34433
No 320
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=29.86 E-value=68 Score=22.56 Aligned_cols=27 Identities=22% Similarity=0.164 Sum_probs=21.6
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCc
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAG 131 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~ 131 (151)
.++++...+|..|..++..+++.||+-
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~~G~eV 31 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIKNRFSV 31 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEecCcHHHHHHHHHHHHcCCeE
Confidence 456777788888888888999999853
No 321
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=29.67 E-value=1.3e+02 Score=20.42 Aligned_cols=112 Identities=11% Similarity=0.061 Sum_probs=57.5
Q ss_pred CCccccCHHHHHHHHhCCCEEEecCC------hhhHhcCCCC----CceeeccccccCCCCCC----CHHHHHHHHhccC
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVRT------PEEFSAGHAT----GAINVPYMYRVGSGMTK----NLKFVEEVSTRFR 102 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR~------~~e~~~ghIp----gAi~ip~~~~~~~~~~~----~~~~~~~~~~~~~ 102 (151)
+.+..+|...++.+.+.++++.+-+. ..+....+++ ++.-+++..-....... ..+..+.+...+.
T Consensus 13 G~~~~lT~~A~~~L~~advv~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 92 (232)
T 2qbu_A 13 GDSELLTLRAVNVLRSVPVICAPRSSSERESIALSIVEDILTERRDGCRILDPVFPMTDDRDELESHWDSAARMVAAELE 92 (232)
T ss_dssp SCGGGSBHHHHHHHHHCSEEECCBCTTCSSCHHHHHHHHHHHHCSSCCEEECCBCCSCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCEEEEeCCCCCccchHHHHHHHHhccccCCcEEEEecCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 34567888888888888888887663 2222222222 23222211000000000 0122233333344
Q ss_pred CCCeEEEEeCCC----hhHHHHHHHHHHCCCCceeEcccc--H-HHHHhCCCCC
Q 031899 103 KHDEIIVGCQSG----KRSMMAATDLLNAGFAGITDIAGG--F-AAWRQNGLPT 149 (151)
Q Consensus 103 ~~~~iv~~c~~g----~~a~~~~~~L~~~G~~~v~~l~GG--~-~~W~~~g~pv 149 (151)
.++.|++.+... .........+.+.|+ .+.++-|= + .+....|.|+
T Consensus 93 ~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi-~v~viPGiSs~~aa~a~~g~pl 145 (232)
T 2qbu_A 93 DGRDVAFITLGDPSIYSTFSYLQQRIEDMGF-KTEMVPGVTSFTACAATAGRTL 145 (232)
T ss_dssp TTCCEEEEESBCTTBSCSHHHHHHHHHHTTC-CEEEECCCCHHHHHHHHTTCCC
T ss_pred CCCeEEEEeCCCCccchhHHHHHHHHHHCCC-cEEEeCCccHHHHHHHHhCCCC
Confidence 566777776532 345567788888897 58777762 2 2445567775
No 322
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.65 E-value=83 Score=18.79 Aligned_cols=10 Identities=30% Similarity=0.508 Sum_probs=3.9
Q ss_pred HHHHHHHCCC
Q 031899 120 AATDLLNAGF 129 (151)
Q Consensus 120 ~~~~L~~~G~ 129 (151)
....|...||
T Consensus 20 l~~~L~~~g~ 29 (142)
T 2qxy_A 20 VKNALEKDGF 29 (142)
T ss_dssp HHHHHGGGTC
T ss_pred HHHHHHhCCC
Confidence 3333433444
No 323
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=29.63 E-value=1.8e+02 Score=24.26 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=27.3
Q ss_pred CCeEEEEeCCC----hhHHHHHHHHHHCCCCceeEcccc
Q 031899 104 HDEIIVGCQSG----KRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 104 ~~~iv~~c~~g----~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
+-.+|.+|..- .....+...|++.|..++.++.||
T Consensus 647 ~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivGG 685 (727)
T 1req_A 647 DVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGG 685 (727)
T ss_dssp TCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEcC
Confidence 55688888743 245568889999999889999998
No 324
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=29.56 E-value=79 Score=18.45 Aligned_cols=14 Identities=14% Similarity=0.223 Sum_probs=6.0
Q ss_pred HHHHHHCCCCceeEc
Q 031899 121 ATDLLNAGFAGITDI 135 (151)
Q Consensus 121 ~~~L~~~G~~~v~~l 135 (151)
...+.+..+ ++.++
T Consensus 40 ~~~l~~~~~-dlii~ 53 (127)
T 3i42_A 40 LHAMSTRGY-DAVFI 53 (127)
T ss_dssp HHHHHHSCC-SEEEE
T ss_pred HHHHHhcCC-CEEEE
Confidence 334444444 34444
No 325
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=29.38 E-value=15 Score=24.13 Aligned_cols=39 Identities=10% Similarity=0.170 Sum_probs=24.9
Q ss_pred CCeEEEEeCCC-hhHHHHHHHHH----HCCCC-ceeEccccHHHH
Q 031899 104 HDEIIVGCQSG-KRSMMAATDLL----NAGFA-GITDIAGGFAAW 142 (151)
Q Consensus 104 ~~~iv~~c~~g-~~a~~~~~~L~----~~G~~-~v~~l~GG~~~W 142 (151)
..+|+|+|... -||..|...|+ ..|.. ++.+...|...|
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 49 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGY 49 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSST
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCcc
Confidence 34689999765 46665544443 45664 577777777766
No 326
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=29.23 E-value=81 Score=24.37 Aligned_cols=50 Identities=18% Similarity=0.158 Sum_probs=31.5
Q ss_pred HHHHHHhc-cCCCCeEEEEeCCChhHHHHHHHHHH--CCCCceeEccccHHHHH
Q 031899 93 FVEEVSTR-FRKHDEIIVGCQSGKRSMMAATDLLN--AGFAGITDIAGGFAAWR 143 (151)
Q Consensus 93 ~~~~~~~~-~~~~~~iv~~c~~g~~a~~~~~~L~~--~G~~~v~~l~GG~~~W~ 143 (151)
.+.+.+.. ++ .-.-|++|++|..|..+|-.|.. -|=+++..++|+|.+|.
T Consensus 131 ~lae~l~~~~p-~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t 183 (454)
T 4ao9_A 131 RLARLICERFP-QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGV 183 (454)
T ss_dssp HHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTT
T ss_pred HHHHHHHHhCC-CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCcc
Confidence 34444443 44 44567889999887776665543 25556777888887654
No 327
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=29.18 E-value=85 Score=22.75 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=23.0
Q ss_pred HHhccCCCCeEEEEeCCChhHHHHHHHHHHC-CCC
Q 031899 97 VSTRFRKHDEIIVGCQSGKRSMMAATDLLNA-GFA 130 (151)
Q Consensus 97 ~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~-G~~ 130 (151)
+...+. +.++++...+|..|..++..|.+. |++
T Consensus 14 ir~~v~-~~kvlvalSGGvDSsvla~ll~~~~g~~ 47 (308)
T 2dpl_A 14 IRETVG-DSKAIIALSGGVDSSTAAVLAHKAIGDR 47 (308)
T ss_dssp HHHHHT-TSCEEEECCSSHHHHHHHHHHHHHHGGG
T ss_pred HHHHhC-CCCEEEEEeChHHHHHHHHHHHHhhCCC
Confidence 333344 456777778888888888888776 863
No 328
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=29.08 E-value=1.8e+02 Score=21.71 Aligned_cols=28 Identities=14% Similarity=-0.040 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHCCCCceeEccccHHHHHh
Q 031899 116 RSMMAATDLLNAGFAGITDIAGGFAAWRQ 144 (151)
Q Consensus 116 ~a~~~~~~L~~~G~~~v~~l~GG~~~W~~ 144 (151)
.+..+.+.|++.|+ ++..+.=|-.+|..
T Consensus 169 ts~~L~~~l~~~G~-~a~~~~tgqtg~~~ 196 (349)
T 2obn_A 169 TSLELHWAAKLRGW-RSKFLATGQTGVML 196 (349)
T ss_dssp HHHHHHHHHHHTTC-CEEEECCSHHHHHH
T ss_pred HHHHHHHHHHhcCC-cEEEEeccchhhhh
Confidence 35567889999999 56666656665543
No 329
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=28.89 E-value=86 Score=21.70 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=23.7
Q ss_pred CCeEEEEeC---CChhHHHHHHHHHHCCC--CceeEc
Q 031899 104 HDEIIVGCQ---SGKRSMMAATDLLNAGF--AGITDI 135 (151)
Q Consensus 104 ~~~iv~~c~---~g~~a~~~~~~L~~~G~--~~v~~l 135 (151)
++.+++... +|.....+...|++.|. +++.++
T Consensus 129 ~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~ 165 (217)
T 3dmp_A 129 DRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFL 165 (217)
T ss_dssp TCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEE
T ss_pred CCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEE
Confidence 456666653 78888888899999998 776644
No 330
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=28.86 E-value=67 Score=24.43 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=23.0
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
..||| .++|.....+|..|.+.|+ +|.+++
T Consensus 12 ~dvvV-IGaG~~GL~aA~~La~~G~-~V~vlE 41 (453)
T 2bcg_G 12 YDVIV-LGTGITECILSGLLSVDGK-KVLHID 41 (453)
T ss_dssp CSEEE-ECCSHHHHHHHHHHHHTTC-CEEEEC
T ss_pred CCEEE-ECcCHHHHHHHHHHHHCCC-eEEEEe
Confidence 34444 5888888889999999998 577775
No 331
>2ivy_A Hypothetical protein SSO1404; structural genomics, unknown function, CAS, RNAI, crispr; 1.4A {Sulfolobus solfataricus} SCOP: d.58.58.1 PDB: 2i8e_A
Probab=28.82 E-value=61 Score=19.45 Aligned_cols=27 Identities=19% Similarity=0.057 Sum_probs=16.2
Q ss_pred EEEEeC-CChhHHHHHHHHHHCCCCcee
Q 031899 107 IIVGCQ-SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 107 iv~~c~-~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+|+|+= +..+..+++..|+..|+..+.
T Consensus 6 lV~YDI~~~kr~~kv~k~L~~yGl~rvQ 33 (101)
T 2ivy_A 6 LIFYDITDDNLRNRVAEFLKKKGLDRIQ 33 (101)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCChHHHHHHHHHHHHhCChhcc
Confidence 445542 345666777788888865443
No 332
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=28.82 E-value=1.8e+02 Score=21.60 Aligned_cols=45 Identities=13% Similarity=0.239 Sum_probs=30.7
Q ss_pred CHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 90 NLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 90 ~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
+.+....+...+...++++++ +.|..+..++..|.+.|. +|.++.
T Consensus 131 ~~~~~~~l~~~~~~~~~vvVi-GgG~~g~E~A~~l~~~g~-~Vtlv~ 175 (408)
T 2gqw_A 131 TLEDARRIQAGLRPQSRLLIV-GGGVIGLELAATARTAGV-HVSLVE 175 (408)
T ss_dssp SHHHHHHHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CHHHHHHHHHHhhcCCeEEEE-CCCHHHHHHHHHHHhCCC-EEEEEE
Confidence 334444454455556677765 677788889999999997 577664
No 333
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=28.62 E-value=85 Score=17.79 Aligned_cols=38 Identities=3% Similarity=-0.028 Sum_probs=28.1
Q ss_pred HHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 93 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
.....+..++.+..+.+.++.......+..+++..||+
T Consensus 26 ~~kkal~~l~~G~~l~V~~dd~~a~~di~~~~~~~G~~ 63 (82)
T 3lvj_C 26 MVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHE 63 (82)
T ss_dssp HHHHHHHTSCTTCEEEEEECCTTHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 34555666777777877777766666788889999995
No 334
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=28.58 E-value=90 Score=21.27 Aligned_cols=30 Identities=10% Similarity=0.186 Sum_probs=14.2
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeE
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~ 134 (151)
+.++|...++.-...++..|.+.|+++|.+
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~ 35 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVI 35 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEE
Confidence 334444444444444555555556543433
No 335
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=28.49 E-value=1e+02 Score=21.65 Aligned_cols=31 Identities=13% Similarity=0.322 Sum_probs=22.5
Q ss_pred CCeEEEEeCCC----hhHHHHHHHHHHCCCCceeEc
Q 031899 104 HDEIIVGCQSG----KRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 104 ~~~iv~~c~~g----~~a~~~~~~L~~~G~~~v~~l 135 (151)
..+|++.|-.| .-...++..|+..||+ |..|
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~-Vi~L 157 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYN-VVDL 157 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCE-EEEC
Confidence 45788888765 3455788899999994 6544
No 336
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=28.37 E-value=50 Score=25.48 Aligned_cols=44 Identities=14% Similarity=0.134 Sum_probs=28.2
Q ss_pred hccCC-CCeEEEEeCCChhHHHHHHHHHHC--CCCceeEccccHHHH
Q 031899 99 TRFRK-HDEIIVGCQSGKRSMMAATDLLNA--GFAGITDIAGGFAAW 142 (151)
Q Consensus 99 ~~~~~-~~~iv~~c~~g~~a~~~~~~L~~~--G~~~v~~l~GG~~~W 142 (151)
...+. .-.-+++|++|..|..+|-.|.+. |=+++..++|||.+|
T Consensus 118 ~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~ 164 (456)
T 4atq_A 118 RLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGR 164 (456)
T ss_dssp HHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCS
T ss_pred HhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCc
Confidence 33443 345688899998877776665432 444566777877654
No 337
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=28.28 E-value=84 Score=22.55 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=12.7
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+...||||+|..| .|+.
T Consensus 216 ~~~~PivVHCsaGvGRTG 233 (291)
T 2hc1_A 216 PGAGPTVVHCSAGVGRTG 233 (291)
T ss_dssp SCCCCEEEECSSSSHHHH
T ss_pred CCCCCEEEEeCCCCchhH
Confidence 4567999999987 4543
No 338
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=28.28 E-value=98 Score=22.35 Aligned_cols=16 Identities=38% Similarity=0.764 Sum_probs=12.2
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||.|..| .|+.
T Consensus 213 ~~~PivVHCsaGvGRTG 229 (304)
T 2cm2_A 213 EHGPVVVHCSAGIGRSG 229 (304)
T ss_dssp TSBCEEEESSSSSSHHH
T ss_pred CCCcEEEEcCcCCchhh
Confidence 467999999987 4544
No 339
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=28.25 E-value=1e+02 Score=24.01 Aligned_cols=28 Identities=7% Similarity=0.017 Sum_probs=19.7
Q ss_pred CCCeEEEEeCCC-------hhHHHHHHHHHHCCCC
Q 031899 103 KHDEIIVGCQSG-------KRSMMAATDLLNAGFA 130 (151)
Q Consensus 103 ~~~~iv~~c~~g-------~~a~~~~~~L~~~G~~ 130 (151)
....+++||++. ..+..+...|.+.|+.
T Consensus 145 r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~ 179 (462)
T 3gh1_A 145 ATPNLVVCWGGHSINEVEYQYTREVGHELGLRELN 179 (462)
T ss_dssp CCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 456899999875 2344566777888884
No 340
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=28.10 E-value=80 Score=22.07 Aligned_cols=17 Identities=29% Similarity=0.514 Sum_probs=12.7
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
....||||+|..| .|+.
T Consensus 174 ~~~~pivVHCsaGvGRTG 191 (253)
T 1p15_A 174 SGNHPITVHCSAGAGRTG 191 (253)
T ss_dssp TTSCCEEEESSSSSHHHH
T ss_pred cCCCCEEEEcCCCCchhH
Confidence 3567999999987 4544
No 341
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=27.72 E-value=81 Score=19.00 Aligned_cols=11 Identities=27% Similarity=0.516 Sum_probs=4.5
Q ss_pred HHHHHHHHCCC
Q 031899 119 MAATDLLNAGF 129 (151)
Q Consensus 119 ~~~~~L~~~G~ 129 (151)
.+...|...||
T Consensus 23 ~l~~~L~~~g~ 33 (147)
T 2zay_A 23 ASISALSQEGF 33 (147)
T ss_dssp HHHHHHHHHTE
T ss_pred HHHHHHHHcCC
Confidence 33444444444
No 342
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.65 E-value=90 Score=18.47 Aligned_cols=15 Identities=13% Similarity=0.020 Sum_probs=6.5
Q ss_pred HHHHHHCCCCceeEcc
Q 031899 121 ATDLLNAGFAGITDIA 136 (151)
Q Consensus 121 ~~~L~~~G~~~v~~l~ 136 (151)
...+....+ ++.+++
T Consensus 40 ~~~l~~~~~-dlvi~d 54 (140)
T 2qr3_A 40 STVLREENP-EVVLLD 54 (140)
T ss_dssp HHHHHHSCE-EEEEEE
T ss_pred HHHHHcCCC-CEEEEe
Confidence 344444444 344443
No 343
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=27.56 E-value=93 Score=17.92 Aligned_cols=14 Identities=0% Similarity=-0.223 Sum_probs=6.2
Q ss_pred HHHHHCCCCceeEcc
Q 031899 122 TDLLNAGFAGITDIA 136 (151)
Q Consensus 122 ~~L~~~G~~~v~~l~ 136 (151)
..+....+ ++.+++
T Consensus 39 ~~~~~~~~-dlvi~D 52 (124)
T 1mb3_A 39 SIARENKP-DLILMD 52 (124)
T ss_dssp HHHHHHCC-SEEEEE
T ss_pred HHHhcCCC-CEEEEe
Confidence 34444444 344443
No 344
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=27.35 E-value=93 Score=22.25 Aligned_cols=16 Identities=31% Similarity=0.627 Sum_probs=12.2
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||+|..| .|+.
T Consensus 211 ~~~PivVHCsaGvGRTG 227 (286)
T 2ooq_A 211 EAGPIVVHCSAGAGRTG 227 (286)
T ss_dssp TSCCEEEECSSSSHHHH
T ss_pred CCCcEEEEeCCCCcHHH
Confidence 467999999987 4544
No 345
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=27.27 E-value=1.3e+02 Score=19.66 Aligned_cols=43 Identities=26% Similarity=0.328 Sum_probs=25.8
Q ss_pred HHHHHHHhccCCCCeEEEEeCC--ChhHHHHHHHHHHCCCCceeEccc
Q 031899 92 KFVEEVSTRFRKHDEIIVGCQS--GKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~c~~--g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
+.+....+.++.+..|+|.|+- |.-.. ++..+.. ..++.++.|
T Consensus 65 ~~~~~~i~~~~~~~gVLiLtDl~GGSP~n-~a~~~~~--~~~v~vItG 109 (159)
T 3mtq_A 65 QQVEALVARFPAQDELIVITDIFAGSVNN-EFVRFLS--RPHFHLLSG 109 (159)
T ss_dssp HHHHHHHHTSCTTSEEEEEESCTTSHHHH-HHHGGGG--STTEEEEEC
T ss_pred HHHHHHHHhcCCCCCEEEEEeCCCCCHHH-HHHHHhc--CCCeEEEeC
Confidence 4456666667778889999884 43333 3333322 246777765
No 346
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=27.21 E-value=94 Score=18.95 Aligned_cols=9 Identities=11% Similarity=-0.031 Sum_probs=3.4
Q ss_pred HHHHHHCCC
Q 031899 121 ATDLLNAGF 129 (151)
Q Consensus 121 ~~~L~~~G~ 129 (151)
...|...||
T Consensus 31 ~~~L~~~g~ 39 (153)
T 3hv2_A 31 QQLLSPLPY 39 (153)
T ss_dssp HHHHTTSSC
T ss_pred HHHhcccCc
Confidence 333333333
No 347
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=27.10 E-value=1.3e+02 Score=22.23 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=26.8
Q ss_pred HHHHhccCCCCeEEEEeCCC-----hhHHHHHHHHHHCCCCceeEccc
Q 031899 95 EEVSTRFRKHDEIIVGCQSG-----KRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 95 ~~~~~~~~~~~~iv~~c~~g-----~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
+++...++...-+++.|+-| ..+..++..+++.|+.-+.++.+
T Consensus 72 ~eI~~~l~~aD~VFVtaGLGGGTGTGaAPVvAeiake~GalvVavVt~ 119 (315)
T 3r4v_A 72 PALMDTIPEADFYIVCYSLGGGSGSVLGPLITGQLADRKASFVSFVVG 119 (315)
T ss_dssp HHHHHTSCCBSCEEEEEESSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHhcCCCCEEEEEeccCCccccchHHHHHHHHHHcCCCEEEEEec
Confidence 34445566555555555532 45667899999999965554443
No 348
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=27.07 E-value=1.1e+02 Score=21.05 Aligned_cols=31 Identities=19% Similarity=0.012 Sum_probs=24.3
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
.+-.++|.++..+.-+...|++.|..++.++
T Consensus 191 ~~~ai~~~~d~~a~g~~~al~~~g~~di~vv 221 (291)
T 3l49_A 191 DVGAIWACWDVPMIGATQALQAAGRTDIRTY 221 (291)
T ss_dssp SCCEEEESSHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CcCEEEECCCchHHHHHHHHHHcCCCCeEEE
Confidence 4456678888888888999999998766654
No 349
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=26.97 E-value=77 Score=23.63 Aligned_cols=31 Identities=16% Similarity=0.348 Sum_probs=23.2
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
..|||+ +.|.....+|..|.+.|+++|.+++
T Consensus 7 ~dVvII-GgG~aGlsaA~~La~~G~~~V~vlE 37 (438)
T 3dje_A 7 SSLLIV-GAGTWGTSTALHLARRGYTNVTVLD 37 (438)
T ss_dssp SCEEEE-CCSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCEEEE-CCCHHHHHHHHHHHHcCCCcEEEEe
Confidence 345554 7777777789999999985688875
No 350
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=26.96 E-value=1e+02 Score=23.42 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=25.1
Q ss_pred cCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 101 FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 101 ~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
+++...|+|+ +.|.....+|..|.+.|+ +|.+++
T Consensus 8 ~~~~~~v~II-GaG~aGl~aA~~L~~~g~-~v~v~E 41 (489)
T 2jae_A 8 VKGSHSVVVL-GGGPAGLCSAFELQKAGY-KVTVLE 41 (489)
T ss_dssp CCSCCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEC
T ss_pred ccCCCCEEEE-CCCHHHHHHHHHHHHCCC-CEEEEe
Confidence 3445566654 777777788999999998 688875
No 351
>4dfc_B Uvrabc system protein A; alpha/beta domains, DNA repair, ATP binding, DNA binding, NU excision repair, hydrolase-DNA binding protein complex; 2.80A {Escherichia coli}
Probab=26.88 E-value=75 Score=19.95 Aligned_cols=43 Identities=5% Similarity=0.003 Sum_probs=27.4
Q ss_pred HHHHHHHhccCCCCeEEEEeCC--C--hhHHHHHHHHHHCCCCceeE
Q 031899 92 KFVEEVSTRFRKHDEIIVGCQS--G--KRSMMAATDLLNAGFAGITD 134 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~c~~--g--~~a~~~~~~L~~~G~~~v~~ 134 (151)
+.+-.....++.++++.+++.- + ..-......|++.||.++++
T Consensus 9 ~qivd~il~~~egtki~iLAPvv~~rKg~~~~ll~~l~~~Gf~Rvrv 55 (126)
T 4dfc_B 9 SQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 55 (126)
T ss_dssp HHHHHHTTSSCTTCCEEEEEEEEEEEESCCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEeEEEeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 3444444456778888777642 1 22345788889999987764
No 352
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=26.84 E-value=1e+02 Score=22.33 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=12.1
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||+|..| .|+.
T Consensus 225 ~~~PivVHCsaGvGRTG 241 (303)
T 2oc3_A 225 GPEPLCVHCSAGCGRTG 241 (303)
T ss_dssp SCCCEEEECSSSSHHHH
T ss_pred CCCcEEEEECCCCccee
Confidence 467999999987 4544
No 353
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=26.84 E-value=1.2e+02 Score=23.20 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=19.0
Q ss_pred cCCCCeEEEEeCCChhHHHHHHHHHH
Q 031899 101 FRKHDEIIVGCQSGKRSMMAATDLLN 126 (151)
Q Consensus 101 ~~~~~~iv~~c~~g~~a~~~~~~L~~ 126 (151)
+.++++|++.+.+|..|..++..|.+
T Consensus 10 l~~~~~vlVa~SGG~DS~~Ll~ll~~ 35 (433)
T 1ni5_A 10 LLTSRQILVAFSGGLDSTVLLHQLVQ 35 (433)
T ss_dssp HTTCSEEEEECCSBHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEcchHHHHHHHHHHHH
Confidence 45667788877888777777777765
No 354
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=26.73 E-value=91 Score=18.00 Aligned_cols=37 Identities=5% Similarity=-0.002 Sum_probs=27.6
Q ss_pred HHHHHhccC-CCCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 94 VEEVSTRFR-KHDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 94 ~~~~~~~~~-~~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
....+..++ .+..+.+.+++......+..+++..||+
T Consensus 18 ~kkal~~l~~~G~~L~V~~dd~~a~~dI~~~~~~~G~~ 55 (87)
T 3hz7_A 18 AKKALAELGEAGGVVTVLVDNDISRQNLQKMAEGMGYQ 55 (87)
T ss_dssp HHHHHHTTGGGCCEEEEEESSHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHhccCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 445556675 6778888888776666788889999995
No 355
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=26.71 E-value=99 Score=22.32 Aligned_cols=16 Identities=31% Similarity=0.569 Sum_probs=12.2
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||+|..| .|+.
T Consensus 224 ~~~PivVHCsaGvGRTG 240 (302)
T 1yfo_A 224 YAGAIVVHCSAGVGRTG 240 (302)
T ss_dssp TSCCEEEECSSSSHHHH
T ss_pred CCCCEEEECCCCCcHHH
Confidence 467999999987 4544
No 356
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=26.71 E-value=1.1e+02 Score=18.53 Aligned_cols=24 Identities=13% Similarity=0.159 Sum_probs=10.8
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCC
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
+|+++.+...........|...|+
T Consensus 6 ~ILivddd~~~~~~l~~~L~~~g~ 29 (152)
T 3heb_A 6 TIVMIEDDLGHARLIEKNIRRAGV 29 (152)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCC
Confidence 344443333334444455555554
No 357
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=26.58 E-value=83 Score=22.14 Aligned_cols=33 Identities=9% Similarity=0.043 Sum_probs=22.0
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
.+.+.++|...+|.-...++..|.+.|+ +|..+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~ 42 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNV-EVFGT 42 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCC-EEEEE
Confidence 4566677777778777778888888887 46544
No 358
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=26.51 E-value=65 Score=20.47 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=27.7
Q ss_pred HHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCcee
Q 031899 91 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 91 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~ 133 (151)
...+......+.++..+++..............|++.|| ++.
T Consensus 114 ~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~-~~~ 155 (192)
T 1l3i_A 114 QEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF-DVN 155 (192)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC-CCE
T ss_pred HHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC-ceE
Confidence 355666666666666666665554555677888999999 444
No 359
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica}
Probab=26.32 E-value=51 Score=23.91 Aligned_cols=104 Identities=10% Similarity=-0.021 Sum_probs=52.8
Q ss_pred CCccccCHHHHHHHHhCCCEEEecC-----ChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEe
Q 031899 37 GVPTSVPVRVAHELLQAGHRYLDVR-----TPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGC 111 (151)
Q Consensus 37 ~~~~~i~~~~~~~~~~~~~~iiDvR-----~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c 111 (151)
+.+..+|..-++.+.+.++++.|-- -..+..... ++..-+...... ..+..+.+...... +.|++.+
T Consensus 31 Gd~~~LT~rA~~~L~~ADvV~~e~~~s~~~~~~~~L~~~-~~~~~i~~~~~~------~~~~~~~i~~~a~~-~~Vv~L~ 102 (292)
T 3i4t_A 31 YDEKDITVRGLEAVKSCDLVFLEHYTAILQCDVAKLEEF-YGKKVIIGDRDL------VETEADQILEPAKT-KNVALLV 102 (292)
T ss_dssp SSGGGSCHHHHHHHHHCSEEEECGGGGGSSSCHHHHHHH-HTSCCEEC-------------CCCTTHHHHTT-SEEEEEE
T ss_pred CChHHhhHHHHHHHHhCCEEEEecccccccCCHHHHHhC-CCCeEEEccccc------HHHHHHHHHHHhcC-CCEEEEe
Confidence 3456789998888888887776543 111111111 222111211000 00001111122233 6677766
Q ss_pred CCC-----hhHHHHHHHHHHCCCCceeEccc--cHHHHHhCCCCCC
Q 031899 112 QSG-----KRSMMAATDLLNAGFAGITDIAG--GFAAWRQNGLPTE 150 (151)
Q Consensus 112 ~~g-----~~a~~~~~~L~~~G~~~v~~l~G--G~~~W~~~g~pv~ 150 (151)
+| .+.......+.+.|+ .+.++.| .+.+-...|.|+.
T Consensus 103 -~GDP~i~g~g~~l~~~l~~~gi-~veviPGiSs~~A~a~~G~pl~ 146 (292)
T 3i4t_A 103 -VGDVYGATTHSDIFVRCQKMGI-EVKVIHNASIMNAIGCSGLQLY 146 (292)
T ss_dssp -SBCHHHHCTTHHHHHHHHHHTC-CEEEECCCCHHHHGGGGSCCGG
T ss_pred -cCCCCccccHHHHHHHHHHCCC-cEEEECCHHHHHHHHHhCCCcc
Confidence 44 234457777888898 5888888 5666555677763
No 360
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=26.31 E-value=1.2e+02 Score=21.08 Aligned_cols=24 Identities=29% Similarity=0.389 Sum_probs=18.1
Q ss_pred CChhHHHHHHHHHHCCCCceeEccc
Q 031899 113 SGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 113 ~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
+|.....++..|.+.|+ +|.++.+
T Consensus 33 Sg~iG~aiA~~~~~~Ga-~V~l~~~ 56 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGA-NVTLVSG 56 (226)
T ss_dssp CSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccHHHHHHHHHHHHCCC-EEEEEEC
Confidence 47777788899999998 5665544
No 361
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=26.27 E-value=77 Score=23.20 Aligned_cols=16 Identities=31% Similarity=0.729 Sum_probs=12.3
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||+|..| .|+.
T Consensus 236 ~~~PivVHCsaGvGRTG 252 (320)
T 2i75_A 236 KEEPVVVHCSAGIGRTG 252 (320)
T ss_dssp CCSCEEEECSSSSSHHH
T ss_pred CCCCEEEEcCCCCcHHH
Confidence 468999999987 4544
No 362
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=26.24 E-value=89 Score=21.82 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=25.1
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
+.+|+++ +.|.-...++..|...|+.++.++|..
T Consensus 28 ~~~Vlvv-G~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLII-GLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEE-CCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEE-ccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4455555 455555578999999999999888765
No 363
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=26.08 E-value=65 Score=24.51 Aligned_cols=27 Identities=22% Similarity=0.219 Sum_probs=21.9
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
+.++++.+.+|..|..++..|.+.|++
T Consensus 187 ~~kvlvalSGGvDS~vll~ll~~~G~~ 213 (413)
T 2c5s_A 187 GGKVMVLLSGGIDSPVAAYLTMKRGVS 213 (413)
T ss_dssp TEEEEEECCSSSHHHHHHHHHHHBTEE
T ss_pred CCeEEEEeCCCChHHHHHHHHHHcCCc
Confidence 556788778888898888888888874
No 364
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=26.03 E-value=1.4e+02 Score=21.65 Aligned_cols=16 Identities=31% Similarity=0.598 Sum_probs=11.8
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
++.||||.|..| .|+.
T Consensus 232 ~~~PivVHCSaGvGRTG 248 (314)
T 4ge6_A 232 PEPPIVVHCSAGIGRTG 248 (314)
T ss_dssp CSCCEEEECSSSSHHHH
T ss_pred CCCCEEEECCCCCcHHH
Confidence 356999999987 4543
No 365
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=25.75 E-value=71 Score=22.56 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=24.2
Q ss_pred CCeEEEEe---CCChhHHHHHHHHHHCCC--CceeEc
Q 031899 104 HDEIIVGC---QSGKRSMMAATDLLNAGF--AGITDI 135 (151)
Q Consensus 104 ~~~iv~~c---~~g~~a~~~~~~L~~~G~--~~v~~l 135 (151)
++.+++++ .+|.....+...|++.|. +++.++
T Consensus 156 ~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I~~~ 192 (243)
T 1bd3_D 156 ERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFV 192 (243)
T ss_dssp GSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCcceEEEE
Confidence 45677765 378888889999999998 776643
No 366
>1f08_A Replication protein E1; DNA-binding domain, initiator protein, helicase; 1.90A {Bovine papillomavirus} SCOP: d.89.1.2 PDB: 1ksx_A 1ksy_A
Probab=25.58 E-value=46 Score=21.73 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=41.3
Q ss_pred CCHHHHHHHHhc-cCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHHhC
Q 031899 89 KNLKFVEEVSTR-FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQN 145 (151)
Q Consensus 89 ~~~~~~~~~~~~-~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~ 145 (151)
++.+.+..++.. ++-...-++....-.||..+|-+..+.+..+.....|-+++|...
T Consensus 86 KsReTV~kll~~lLnv~e~q~L~ePPK~RS~~aALfwYK~~~s~~~~~~G~~PeWI~~ 143 (148)
T 1f08_A 86 KSRETVRNLMANMLNVREECLMLQPPKIRGLSAALFWFKSSLSPATLKHGALPEWIRA 143 (148)
T ss_dssp ECHHHHHHHHHHHHTCCGGGEEEECBCCSCHHHHHHHHHHTTSSSCEEEECCCHHHHH
T ss_pred CCHHHHHHHHHHhcCCCHHHEecCCCCCCCcceeeeeeeccccCcceEECCCcHHHHH
Confidence 455666666665 343333344445568999999999999998988889999999864
No 367
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=25.55 E-value=1.2e+02 Score=23.45 Aligned_cols=45 Identities=11% Similarity=0.045 Sum_probs=26.5
Q ss_pred HHhccCCCCeEEEEeCCChhHHHHHHHHH-----HCCCC---ceeEccccHHH
Q 031899 97 VSTRFRKHDEIIVGCQSGKRSMMAATDLL-----NAGFA---GITDIAGGFAA 141 (151)
Q Consensus 97 ~~~~~~~~~~iv~~c~~g~~a~~~~~~L~-----~~G~~---~v~~l~GG~~~ 141 (151)
+.+..+.+-.-|++|++|..|..+|-.|. ..|.+ .+..+.|||.+
T Consensus 120 L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG 172 (473)
T 4e3q_A 120 LVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHG 172 (473)
T ss_dssp HHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCC
T ss_pred HHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECC
Confidence 33344555556889999977666554442 34543 35556676654
No 368
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=25.39 E-value=1.1e+02 Score=20.49 Aligned_cols=32 Identities=9% Similarity=0.020 Sum_probs=19.9
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
++.++|...+|.-...++..|.+.|+ +|..++
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~ 38 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGA-KVVAVT 38 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEe
Confidence 34566665666656667777777777 455543
No 369
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=25.38 E-value=84 Score=22.46 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=23.5
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
+.+.|+|...+|.-...++..|.+.|+ +|..++
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~ 50 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFD 50 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEe
Confidence 355677777788888888999999998 566553
No 370
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=25.33 E-value=1.3e+02 Score=21.75 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=12.7
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+...||||.|..| .|+.
T Consensus 229 ~~~~PivVHCsaGvGRTG 246 (305)
T 2cjz_A 229 PHCAPIIVHSSAGIGRTG 246 (305)
T ss_dssp SSCCCEEEEESSSSHHHH
T ss_pred CCCCCEEEEeCCCcchhH
Confidence 3568999999987 4543
No 371
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=25.32 E-value=1.9e+02 Score=20.72 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=24.3
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.+++++++ +.|..+..++..|.+.|.++|.++.-
T Consensus 121 ~~k~vlvl-GaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 121 KNNICVVL-GSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp TTSEEEEE-CSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred cCCEEEEE-CCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 35666665 55666667888899999988877653
No 372
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=25.26 E-value=77 Score=18.61 Aligned_cols=26 Identities=23% Similarity=0.244 Sum_probs=15.9
Q ss_pred EEEEeCC-ChhHHHHHHHHHHCCCCce
Q 031899 107 IIVGCQS-GKRSMMAATDLLNAGFAGI 132 (151)
Q Consensus 107 iv~~c~~-g~~a~~~~~~L~~~G~~~v 132 (151)
+|+|+=+ ..|-.++++.|+..|+..|
T Consensus 7 lV~YDI~~~krr~kv~k~l~~yGl~rv 33 (91)
T 3exc_X 7 LVVYDVSDDSKRNKLANNLKKLGLERI 33 (91)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHhCCccc
Confidence 4555533 2455677888888886443
No 373
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=25.23 E-value=1.7e+02 Score=20.04 Aligned_cols=37 Identities=14% Similarity=-0.069 Sum_probs=24.3
Q ss_pred cCCCCeEEEEeCC-----------ChhHHHHHHHHHHCCCCceeEccc
Q 031899 101 FRKHDEIIVGCQS-----------GKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 101 ~~~~~~iv~~c~~-----------g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
...+-|+|++... -..+..++..|.+.|++++.++.|
T Consensus 88 ~~~~iPvV~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~i~~i~~ 135 (289)
T 3g85_A 88 ASLTLPIILFNRLSNKYSSVNVDNYKMGEKASLLFAKKRYKSAAAILT 135 (289)
T ss_dssp CCCSSCEEEESCCCSSSEEEEECHHHHHHHHHHHHHHTTCCBCEEEEC
T ss_pred ccCCCCEEEECCCCCCCCEEEeCHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3445666666432 133456888899999998887765
No 374
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=25.21 E-value=13 Score=26.33 Aligned_cols=46 Identities=9% Similarity=0.112 Sum_probs=33.3
Q ss_pred HHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 91 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 91 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
...++.....+.++..++++|............|++.||..+..+.
T Consensus 191 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 191 WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEE
Confidence 3567777777777778888887665666777888889997665544
No 375
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=25.19 E-value=1.2e+02 Score=23.46 Aligned_cols=42 Identities=10% Similarity=-0.011 Sum_probs=30.3
Q ss_pred HHHHHHhccC----CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 93 FVEEVSTRFR----KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 93 ~~~~~~~~~~----~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+++.+.+.++ ++-+|+++|..|.....+-..|+++|++ +..+
T Consensus 163 Yi~~~~~~~~~~~~~~lkivvd~~~Ga~~~~~~~~l~~lG~~-v~~l 208 (481)
T 4hjh_A 163 YADRYAGFLGKGSLNGLRVGVYQHSSVARDLLMYLLTTLGVE-PVAL 208 (481)
T ss_dssp HHHHHHHHHCTTTTTTCEEEEEEETCTTHHHHHHHHHHTTCE-EEEE
T ss_pred HHHHHHHhcCcccccCCEEEEECCCChHHHHHHHHHHHcCCe-EEEe
Confidence 4555544443 3467999998888888888999999994 5544
No 376
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=25.07 E-value=66 Score=17.94 Aligned_cols=38 Identities=11% Similarity=-0.027 Sum_probs=27.5
Q ss_pred HHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 93 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
.....+..++.+..+.+..+.......+..+++..||+
T Consensus 22 ~~k~al~~l~~G~~L~V~~dd~~a~~di~~~~~~~G~~ 59 (78)
T 1pav_A 22 ELIKAYKQAKVGEVISVYSTDAGTKKDAPAWIQKSGQE 59 (78)
T ss_dssp HHHHHHTTSCTTCCEECCBSSSCHHHHHHHHHHHHTEE
T ss_pred HHHHHHHcCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 34556666777777777777766566778888999984
No 377
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=25.00 E-value=97 Score=18.89 Aligned_cols=15 Identities=20% Similarity=0.231 Sum_probs=10.3
Q ss_pred hhHHHHHHHHHHCCC
Q 031899 115 KRSMMAATDLLNAGF 129 (151)
Q Consensus 115 ~~a~~~~~~L~~~G~ 129 (151)
..+..++..|++.|+
T Consensus 26 ~~a~eA~~~L~~~Gi 40 (118)
T 3ju3_A 26 GPILDVIEDLKEEGI 40 (118)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCC
Confidence 445567777877776
No 378
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=24.90 E-value=87 Score=18.61 Aligned_cols=38 Identities=16% Similarity=0.133 Sum_probs=26.6
Q ss_pred HHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 93 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
.....+..++.+..+.+.++.......+..+++..||+
T Consensus 43 ktkkaL~~l~~Ge~L~Vl~dd~~a~~dIp~~~~~~G~~ 80 (97)
T 1je3_A 43 ATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYT 80 (97)
T ss_dssp HHHHHTTTCCSSCEEEEEEBCSSSSCHHHHHHHHHTCS
T ss_pred HHHHHHHcCCCCCEEEEEECCcchHHHHHHHHHHCCCE
Confidence 45556667777777777776655444577888999995
No 379
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=24.69 E-value=65 Score=22.23 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=24.8
Q ss_pred CCCeEEEEeCCC-hhHHHHHHHHHHCCCCceeEccccH
Q 031899 103 KHDEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
....|+|+|... -||..+...|+...-+++.+...|.
T Consensus 80 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 80 PVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 356899999866 5787777777765434566665554
No 380
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=24.63 E-value=1.6e+02 Score=21.28 Aligned_cols=17 Identities=35% Similarity=0.624 Sum_probs=12.5
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+...||||.|..| .|+.
T Consensus 233 ~~~~PIvVHCsaGvGRTG 250 (307)
T 3s3e_A 233 AEQRPIVVHCSAGVGRSG 250 (307)
T ss_dssp SCCSCEEEECSSSSHHHH
T ss_pred CCCCCEEEEcCCCchHHH
Confidence 3467999999987 4544
No 381
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.56 E-value=1.2e+02 Score=18.16 Aligned_cols=84 Identities=15% Similarity=0.276 Sum_probs=47.9
Q ss_pred HHHHHh-CCCEEEecCChhhHhcC--CCCCceeeccccccCCCCCCCHHHHHHHH---hccCCCCeEEEEeCCChhHHHH
Q 031899 47 AHELLQ-AGHRYLDVRTPEEFSAG--HATGAINVPYMYRVGSGMTKNLKFVEEVS---TRFRKHDEIIVGCQSGKRSMMA 120 (151)
Q Consensus 47 ~~~~~~-~~~~iiDvR~~~e~~~g--hIpgAi~ip~~~~~~~~~~~~~~~~~~~~---~~~~~~~~iv~~c~~g~~a~~~ 120 (151)
+++.++ +++.+=-+|+|.|.... .+-.-.|..+-.. ...+.++.+... ..+...--||+|.+...|-...
T Consensus 18 fkdiikkngfkvrtvrspqelkdsieelvkkynativvv----vvddkewaekairfvkslgaqvliiiydqdqnrleef 93 (134)
T 2l69_A 18 FKDIIKKNGFKVRTVRSPQELKDSIEELVKKYNATIVVV----VVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEF 93 (134)
T ss_dssp HHHHHHHTTCEEEEECSHHHHHHHHHHHTTCCCCEEEEE----ECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHHHHH
T ss_pred HHHHHHhcCceEEEecCHHHHHHHHHHHHHHhCCeEEEE----EEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHHHHH
Confidence 444444 45888889998876521 1111111111000 012333333332 2355667788998888888888
Q ss_pred HHHHHHCCCCceeEc
Q 031899 121 ATDLLNAGFAGITDI 135 (151)
Q Consensus 121 ~~~L~~~G~~~v~~l 135 (151)
.+..++.||+ |..+
T Consensus 94 srevrrrgfe-vrtv 107 (134)
T 2l69_A 94 SREVRRRGFE-VRTV 107 (134)
T ss_dssp HHHHHHTTCC-EEEE
T ss_pred HHHHHhcCce-EEEe
Confidence 9999999995 5544
No 382
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=24.54 E-value=83 Score=16.31 Aligned_cols=17 Identities=12% Similarity=-0.089 Sum_probs=7.0
Q ss_pred HHHHHHHHCCCCceeEc
Q 031899 119 MAATDLLNAGFAGITDI 135 (151)
Q Consensus 119 ~~~~~L~~~G~~~v~~l 135 (151)
.+...+.+.++..+.++
T Consensus 13 ~a~~~m~~~~~~~~pV~ 29 (70)
T 3fio_A 13 RVAKILSRNKAGSAVVM 29 (70)
T ss_dssp HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEE
Confidence 34444444444333333
No 383
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=24.47 E-value=1.2e+02 Score=21.63 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=24.8
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
.++++++. +.|.-+..++..|.+.|.++|.+++--
T Consensus 126 ~~k~vlVl-GaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQV-GAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEE-CCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 35556555 557667778889999999888876543
No 384
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=24.47 E-value=95 Score=18.66 Aligned_cols=36 Identities=25% Similarity=0.291 Sum_probs=20.5
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCC-CCceeEccccHHH
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAG-FAGITDIAGGFAA 141 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G-~~~v~~l~GG~~~ 141 (151)
.+|+++.+.......+...|...| | .+.....+-.+
T Consensus 21 ~~ilivdd~~~~~~~l~~~L~~~g~~-~v~~~~~~~~~ 57 (146)
T 4dad_A 21 INILVASEDASRLAHLARLVGDAGRY-RVTRTVGRAAQ 57 (146)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCSC-EEEEECCCHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHhhCCCe-EEEEeCCHHHH
Confidence 455555555555556667777777 6 35444444433
No 385
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=24.47 E-value=98 Score=21.59 Aligned_cols=29 Identities=7% Similarity=-0.026 Sum_probs=23.6
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCc
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAG 131 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~ 131 (151)
++++|+++.+ +|.....++..|++.|.+-
T Consensus 135 ~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~v 166 (232)
T 3mjd_A 135 TNKKVLLIDDVMTAGTAFYESYNKLKIINAKI 166 (232)
T ss_dssp TTCEEEEECSCCSSSHHHHHHHHHHHTTTCEE
T ss_pred CCCEEEEEEeeccccHHHHHHHHHHHHCCCEE
Confidence 5788888875 6788888999999999753
No 386
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=24.46 E-value=82 Score=23.30 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=26.5
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
+.+|++ .+.|.-...++..|...|+.++.++|+.
T Consensus 36 ~~~Vli-vG~GGlG~~ia~~La~~Gvg~itlvD~d 69 (346)
T 1y8q_A 36 ASRVLL-VGLKGLGAEIAKNLILAGVKGLTMLDHE 69 (346)
T ss_dssp TCEEEE-ECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEE-ECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 445554 5677777789999999999999988865
No 387
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=24.41 E-value=82 Score=22.35 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=25.0
Q ss_pred CCCeEEEEe---CCChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGC---QSGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c---~~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+++.|+++. .+|.....+...|++.|-+.+.
T Consensus 155 ~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~ 188 (250)
T 3ozf_A 155 KGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVA 188 (250)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEE
Confidence 477888876 4788888899999999987655
No 388
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=24.39 E-value=1.2e+02 Score=18.01 Aligned_cols=11 Identities=18% Similarity=0.229 Sum_probs=5.4
Q ss_pred EEEeCCChhHH
Q 031899 108 IVGCQSGKRSM 118 (151)
Q Consensus 108 v~~c~~g~~a~ 118 (151)
|..|.++..+.
T Consensus 30 v~~~~~~~~al 40 (133)
T 2r25_B 30 IELACDGQEAF 40 (133)
T ss_dssp EEEESSHHHHH
T ss_pred EEEECCHHHHH
Confidence 44455554443
No 389
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=24.21 E-value=1.1e+02 Score=23.74 Aligned_cols=50 Identities=22% Similarity=0.339 Sum_probs=34.9
Q ss_pred cCCCCeEEEEeC---CChhHHHHHHHHHHCCCCcee---Ec---cccHHHHHhCCCCCC
Q 031899 101 FRKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT---DI---AGGFAAWRQNGLPTE 150 (151)
Q Consensus 101 ~~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~---~l---~GG~~~W~~~g~pv~ 150 (151)
+.++++|+++.+ +|.....+...|++.|.+-+. ++ .||-+...+.|+|+.
T Consensus 362 ~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~~g~~~l~~~g~~v~ 420 (453)
T 3qw4_B 362 YKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDMGAKAFLNKLGYDFE 420 (453)
T ss_dssp CCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSSSHHHHHHHTTCCEE
T ss_pred cCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCcchHHHHHhcCCCEE
Confidence 446788888864 788888899999999975433 22 356666777788763
No 390
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=24.21 E-value=1.4e+02 Score=19.98 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=24.2
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
.+-.++|.+...+.-+...|++.|++++.++
T Consensus 172 ~~~ai~~~~d~~A~g~~~al~~~g~~di~vi 202 (255)
T 1byk_A 172 ETTALLCATDTLALGASKYLQEQRIDTLQLA 202 (255)
T ss_dssp TCCEEEESSHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCEEEEeChHHHHHHHHHHHHcCCCcEEEE
Confidence 3556778887778888999999998766654
No 391
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=24.10 E-value=1.3e+02 Score=20.63 Aligned_cols=38 Identities=18% Similarity=0.137 Sum_probs=26.9
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHH
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWR 143 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~ 143 (151)
.+|+++.++......+...|...|| +|.....|-.++.
T Consensus 130 ~~ILivdd~~~~~~~l~~~L~~~g~-~v~~a~~~~eal~ 167 (254)
T 2ayx_A 130 MMILVVDDHPINRRLLADQLGSLGY-QCKTANDGVDALN 167 (254)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHTS-EEEEECCSHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCC-EEEEECCHHHHHH
Confidence 3466666666666678888888999 5777777766654
No 392
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=23.94 E-value=78 Score=19.48 Aligned_cols=21 Identities=24% Similarity=0.349 Sum_probs=11.7
Q ss_pred EEEEeCCC-hhHHHHHHHHHHC
Q 031899 107 IIVGCQSG-KRSMMAATDLLNA 127 (151)
Q Consensus 107 iv~~c~~g-~~a~~~~~~L~~~ 127 (151)
|+|+|... -||..|...|+..
T Consensus 2 VLFVC~gN~cRSpmAEa~~~~~ 23 (124)
T 1y1l_A 2 VLFVCIHNTARSVMAEALFNAM 23 (124)
T ss_dssp EEEEESSCSSHHHHHHHHHHTT
T ss_pred EEEEeCCChhHHHHHHHHHHHh
Confidence 56666544 4565555555554
No 393
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=23.82 E-value=1.2e+02 Score=20.61 Aligned_cols=30 Identities=20% Similarity=0.129 Sum_probs=15.3
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+.++|...++.-...++..|.+.|+ +|.++
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~-~V~~~ 43 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGA-RVIIA 43 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEE
Confidence 3444444445444455566666665 34443
No 394
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=23.53 E-value=1.4e+02 Score=19.90 Aligned_cols=43 Identities=9% Similarity=0.017 Sum_probs=31.3
Q ss_pred HHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCcee
Q 031899 91 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 91 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~ 133 (151)
..++..+...+.++..+++.++.......+...|.+.||..+.
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~ 175 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTY 175 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 5677777777888888888776655555667778888986544
No 395
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=23.50 E-value=1.5e+02 Score=18.88 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=15.1
Q ss_pred EEEEeCCChhHHHHHHHHHHCCCCceeEccccHHH
Q 031899 107 IIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAA 141 (151)
Q Consensus 107 iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~ 141 (151)
|+++.+...........|...|| .|.....|-.+
T Consensus 10 iLivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~a 43 (184)
T 3rqi_A 10 FLVIDDNEVFAGTLARGLERRGY-AVRQAHNKDEA 43 (184)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC-EEEEECSHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHCCC-EEEEeCCHHHH
Confidence 44433333334444555555555 34444444333
No 396
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=23.43 E-value=1.1e+02 Score=17.51 Aligned_cols=13 Identities=8% Similarity=-0.002 Sum_probs=5.5
Q ss_pred HHHHHCCCCceeEc
Q 031899 122 TDLLNAGFAGITDI 135 (151)
Q Consensus 122 ~~L~~~G~~~v~~l 135 (151)
..+....+ ++.++
T Consensus 41 ~~~~~~~~-dlvi~ 53 (123)
T 1xhf_A 41 QILSEYDI-NLVIM 53 (123)
T ss_dssp HHHHHSCC-SEEEE
T ss_pred HHHhcCCC-CEEEE
Confidence 34444444 34444
No 397
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=23.38 E-value=1.2e+02 Score=17.67 Aligned_cols=10 Identities=40% Similarity=0.670 Sum_probs=3.9
Q ss_pred HHHHHHHCCC
Q 031899 120 AATDLLNAGF 129 (151)
Q Consensus 120 ~~~~L~~~G~ 129 (151)
....|...||
T Consensus 21 l~~~L~~~g~ 30 (132)
T 2rdm_A 21 FESTLTDAGF 30 (132)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 3333333444
No 398
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=23.37 E-value=1.2e+02 Score=17.85 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=14.6
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccccHH
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 140 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~ 140 (151)
+|+++.+...........|...|| +|.....|-.
T Consensus 9 ~ILivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~ 42 (136)
T 1dcf_A 9 KVLVMDENGVSRMVTKGLLVHLGC-EVTTVSSNEE 42 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC-EEEEESSHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCC-eEEEeCCHHH
Confidence 344443333333344455555555 3443333333
No 399
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=23.36 E-value=87 Score=20.00 Aligned_cols=43 Identities=21% Similarity=0.292 Sum_probs=23.4
Q ss_pred HHHHHHhcc-CCCCeEEEEeCC-ChhHHHHHHHHHHCCCCceeEccc
Q 031899 93 FVEEVSTRF-RKHDEIIVGCQS-GKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 93 ~~~~~~~~~-~~~~~iv~~c~~-g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.+......+ +.++.|+|+|+- |..-...+..+.+ + .++.++.|
T Consensus 49 ~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l~~-~-~~v~vItG 93 (144)
T 3lfh_A 49 EVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSMMK-E-YDVKVITG 93 (144)
T ss_dssp HHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHHHH-H-HCCEEEES
T ss_pred HHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHHhc-C-CCEEEEeC
Confidence 344445556 767889999884 3332333333332 2 35666655
No 400
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=23.28 E-value=1.8e+02 Score=22.75 Aligned_cols=17 Identities=24% Similarity=0.526 Sum_probs=12.7
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+...||||+|..| .|+.
T Consensus 450 ~~~~PivVHCsaGvGRTG 467 (525)
T 2shp_A 450 MDAGPVVVHCSAGIGRTG 467 (525)
T ss_dssp TTCCCEEEECSSSSHHHH
T ss_pred CCCCCEEEEcCCCCchhH
Confidence 4578999999987 4543
No 401
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=23.28 E-value=1.3e+02 Score=21.05 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=24.5
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
.++|+|...+|.-...++..|.+.|+ +|..++
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~ 38 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGE-EVTVLD 38 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCC-EEEEEe
Confidence 45677777788878888999988998 566554
No 402
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=23.21 E-value=1.5e+02 Score=23.90 Aligned_cols=44 Identities=23% Similarity=0.319 Sum_probs=28.8
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHHHHhCCCCCC
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 150 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~pv~ 150 (151)
.+++-...-.....+++.|.++|| ++..-.|=.....++|+|++
T Consensus 7 ~aLISV~DK~~iv~lAk~L~~lGf-~I~ATgGTAk~L~e~GI~v~ 50 (593)
T 1g8m_A 7 LALLSVSEKAGLVEFARSLNALGL-GLIASGGTATALRDAGLPVR 50 (593)
T ss_dssp EEEEEESCCTTHHHHHHHHHHTTC-EEEECHHHHHHHHHTTCCCE
T ss_pred EEEEEEeCcHhHHHHHHHHHHCCC-EEEEchHHHHHHHHCCCeEE
Confidence 444444445556679999999999 45543333455566898874
No 403
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=23.19 E-value=1.1e+02 Score=20.79 Aligned_cols=30 Identities=7% Similarity=-0.006 Sum_probs=23.4
Q ss_pred CCCeEEEEeC---CChhHHHHHHHHHHCCCCcee
Q 031899 103 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 103 ~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~ 133 (151)
++ +|+++.+ +|.....++..|++.|.+.+.
T Consensus 117 ~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~ 149 (213)
T 1lh0_A 117 QG-RVMLVDDVITAGTAIRESMEIIQAHGATLAG 149 (213)
T ss_dssp CS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEE
T ss_pred CC-CEEEEEecccchHHHHHHHHHHHHCCCeEEE
Confidence 56 8888875 677888889999999986543
No 404
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=23.17 E-value=1.5e+02 Score=21.67 Aligned_cols=35 Identities=9% Similarity=0.103 Sum_probs=25.2
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
.++++++. +.|..+..++..|.+.|.++|.+..--
T Consensus 147 ~gk~~lVl-GAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLL-GAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEE-CcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35555555 567777778899999999888876433
No 405
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=23.08 E-value=1.2e+02 Score=20.38 Aligned_cols=32 Identities=9% Similarity=-0.015 Sum_probs=19.3
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
++.++|...++.-...++..|.+.|+ +|.+++
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~-~V~~~~ 42 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGA-RLILID 42 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 34555555566555567777777776 455543
No 406
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=23.08 E-value=1.6e+02 Score=19.00 Aligned_cols=15 Identities=20% Similarity=0.228 Sum_probs=8.0
Q ss_pred HHHHHh-CCCEEEecC
Q 031899 47 AHELLQ-AGHRYLDVR 61 (151)
Q Consensus 47 ~~~~~~-~~~~iiDvR 61 (151)
+..++. .++.++|.-
T Consensus 38 va~~l~~~G~eVi~lG 53 (161)
T 2yxb_A 38 VARALRDAGFEVVYTG 53 (161)
T ss_dssp HHHHHHHTTCEEECCC
T ss_pred HHHHHHHCCCEEEECC
Confidence 333433 567777653
No 407
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=23.02 E-value=1.1e+02 Score=22.75 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=26.9
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
+.+|+++ +.|.-...++..|...|+.++.++|...
T Consensus 34 ~~~VlIv-GaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLL-GAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEE-CCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4555554 6676777899999999999999888753
No 408
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=22.92 E-value=1.2e+02 Score=17.38 Aligned_cols=15 Identities=13% Similarity=-0.186 Sum_probs=7.0
Q ss_pred HHHHHHCCCCceeEcc
Q 031899 121 ATDLLNAGFAGITDIA 136 (151)
Q Consensus 121 ~~~L~~~G~~~v~~l~ 136 (151)
...+....+ ++.+++
T Consensus 37 ~~~~~~~~~-dlil~D 51 (121)
T 2pl1_A 37 DYYLNEHIP-DIAIVD 51 (121)
T ss_dssp HHHHHHSCC-SEEEEC
T ss_pred HHHHhccCC-CEEEEe
Confidence 344455444 455544
No 409
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=22.91 E-value=1.1e+02 Score=17.29 Aligned_cols=14 Identities=0% Similarity=0.313 Sum_probs=6.2
Q ss_pred HHHHHCCCCceeEcc
Q 031899 122 TDLLNAGFAGITDIA 136 (151)
Q Consensus 122 ~~L~~~G~~~v~~l~ 136 (151)
..+....+ ++.+++
T Consensus 39 ~~~~~~~~-dlvl~D 52 (116)
T 3a10_A 39 KKFFSGNY-DLVILD 52 (116)
T ss_dssp HHHHHSCC-SEEEEC
T ss_pred HHHhcCCC-CEEEEE
Confidence 34444444 344443
No 410
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=22.89 E-value=1.3e+02 Score=17.91 Aligned_cols=14 Identities=0% Similarity=0.226 Sum_probs=5.9
Q ss_pred HHHHHCCCCceeEcc
Q 031899 122 TDLLNAGFAGITDIA 136 (151)
Q Consensus 122 ~~L~~~G~~~v~~l~ 136 (151)
..+....+ ++.+++
T Consensus 42 ~~~~~~~~-dlvllD 55 (136)
T 2qzj_A 42 GKIFSNKY-DLIFLE 55 (136)
T ss_dssp HHHHHCCC-SEEEEE
T ss_pred HHHHhcCC-CEEEEe
Confidence 34444444 344443
No 411
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=22.77 E-value=77 Score=19.37 Aligned_cols=27 Identities=15% Similarity=0.010 Sum_probs=20.6
Q ss_pred CCeEEEEeCC------ChhHHHHHHHHHHCCCC
Q 031899 104 HDEIIVGCQS------GKRSMMAATDLLNAGFA 130 (151)
Q Consensus 104 ~~~iv~~c~~------g~~a~~~~~~L~~~G~~ 130 (151)
..+|++|..+ ...+..+-..|.+.|.+
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~ 47 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVD 47 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBC
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCC
Confidence 5578888774 56777888889988875
No 412
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=22.69 E-value=97 Score=21.57 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=26.4
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccccH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 139 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~ 139 (151)
+++|+++ +.|.-...++..|...|+.++.+++...
T Consensus 31 ~~~VlVv-G~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIV-GLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEE-eeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3455554 6677777899999999998888887653
No 413
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=22.64 E-value=1.1e+02 Score=23.51 Aligned_cols=26 Identities=15% Similarity=0.355 Sum_probs=18.0
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
.++|+....|..|+.++..|++.||+
T Consensus 15 ~KVVVA~SGGlDSSv~a~~Lke~G~e 40 (421)
T 1vl2_A 15 EKVVLAYSGGLDTSVILKWLCEKGFD 40 (421)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred CCEEEEeCCcHHHHHHHHHHHHCCCe
Confidence 34666556677777777777777874
No 414
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=22.63 E-value=1.7e+02 Score=20.24 Aligned_cols=32 Identities=3% Similarity=-0.041 Sum_probs=23.9
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCC---ceeEc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFA---GITDI 135 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~---~v~~l 135 (151)
+.+-.|+|.+...+.-+...|++.|+. ++.++
T Consensus 191 ~~~~ai~~~~d~~A~g~~~al~~~g~~vP~di~vi 225 (295)
T 3hcw_A 191 NIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTA 225 (295)
T ss_dssp TSCEEEEESSHHHHHHHHHHHHHTTCCTTTTEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHHcCCCCCCceEEE
Confidence 356677888877788888999999984 55543
No 415
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=22.48 E-value=1.4e+02 Score=20.06 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=18.8
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
++.++|...++.-...++..|.+.|+ +|.++.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~ 38 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGA-RVVAVS 38 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 34555555555555566677777776 455443
No 416
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=22.39 E-value=1.5e+02 Score=23.20 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=12.6
Q ss_pred CCCCeEEEEeCCC-hhHH
Q 031899 102 RKHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 102 ~~~~~iv~~c~~g-~~a~ 118 (151)
+...||||+|..| .|+.
T Consensus 444 ~~~~PivVHCsaG~GRTG 461 (532)
T 2b3o_A 444 PHAGPIIVHCSAGIGRTG 461 (532)
T ss_dssp TTCCCEEEECSSSSSHHH
T ss_pred CCCCCEEEEcCCCCchhH
Confidence 4578999999987 3443
No 417
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=22.32 E-value=1.4e+02 Score=21.68 Aligned_cols=16 Identities=25% Similarity=0.470 Sum_probs=12.1
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||.|..| .|+.
T Consensus 219 ~~~PivVHCsaGvGRTG 235 (309)
T 2p6x_A 219 DSVPICIHCSAGCGRTG 235 (309)
T ss_dssp CSSCEEEECSSSSSHHH
T ss_pred CCCcEEEEeCCCCcHHH
Confidence 568999999987 4543
No 418
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=22.30 E-value=1.2e+02 Score=21.60 Aligned_cols=33 Identities=9% Similarity=0.032 Sum_probs=25.3
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
..++|+|...+|.-...++..|.+.|+ +|..+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~ 56 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLD 56 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 356788877788888888999999998 566553
No 419
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=22.28 E-value=55 Score=20.66 Aligned_cols=27 Identities=22% Similarity=0.138 Sum_probs=20.2
Q ss_pred CCeEEEEeC------CChhHHHHHHHHHHCCCC
Q 031899 104 HDEIIVGCQ------SGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 104 ~~~iv~~c~------~g~~a~~~~~~L~~~G~~ 130 (151)
..+|++|+. ....+..+-..|.+.|++
T Consensus 34 ~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~ 66 (135)
T 2wci_A 34 ENPILLYMKGSPKLPSCGFSAQAVQALAACGER 66 (135)
T ss_dssp HCSEEEEESBCSSSBSSHHHHHHHHHHHTTCSC
T ss_pred cCCEEEEEEecCCCCCCccHHHHHHHHHHcCCc
Confidence 346888877 346677888889998875
No 420
>1zat_A L,D-transpeptidase; L,D-transpeptidation, peptidoglycan, beta-lactam insensitive transpeptidase, antibiotic resistance, transferase; 2.40A {Enterococcus faecium} SCOP: b.160.1.1 d.335.1.1 PDB: 2hkl_A
Probab=22.26 E-value=67 Score=22.39 Aligned_cols=19 Identities=16% Similarity=0.155 Sum_probs=16.0
Q ss_pred HHHHHHHhccCCCCeEEEE
Q 031899 92 KFVEEVSTRFRKHDEIIVG 110 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~ 110 (151)
+.++++...++.+.+|+||
T Consensus 232 ~da~~l~~~v~~Gt~V~I~ 250 (250)
T 1zat_A 232 SVMKELFGMVEKGTPVLVF 250 (250)
T ss_dssp HHHHHHHHHCCTTCEEEEC
T ss_pred HHHHHHHhhCCCCCEEEeC
Confidence 6788888888889999875
No 421
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=22.25 E-value=1.5e+02 Score=20.99 Aligned_cols=40 Identities=13% Similarity=-0.024 Sum_probs=28.0
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCcee-EccccHHHHHh
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGIT-DIAGGFAAWRQ 144 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~-~l~GG~~~W~~ 144 (151)
...|+++.++......+...|...|| .|. ....|..++..
T Consensus 160 ~~rILvVdD~~~~~~~l~~~L~~~g~-~v~~~a~~g~eAl~~ 200 (286)
T 3n0r_A 160 ATEVLIIEDEPVIAADIEALVRELGH-DVTDIAATRGEALEA 200 (286)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred CCcEEEEcCCHHHHHHHHHHhhccCc-eEEEEeCCHHHHHHH
Confidence 34566666666666678889999999 465 67777777643
No 422
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=22.20 E-value=1.5e+02 Score=20.13 Aligned_cols=31 Identities=26% Similarity=0.249 Sum_probs=21.9
Q ss_pred CCeEEEEeCCC----hhHHHHHHHHHHCCCCceeEc
Q 031899 104 HDEIIVGCQSG----KRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 104 ~~~iv~~c~~g----~~a~~~~~~L~~~G~~~v~~l 135 (151)
..++++.|-.| .-...++..|+..||+ |..|
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~-Vi~L 126 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQ-IVDL 126 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCE-EEEC
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCe-EEEc
Confidence 35788888654 3455788899999994 5544
No 423
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=22.11 E-value=80 Score=18.84 Aligned_cols=35 Identities=11% Similarity=-0.098 Sum_probs=18.9
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccccHHH
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAA 141 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG~~~ 141 (151)
+|+++.+.......+...|...|| ++.....+-.+
T Consensus 8 ~ilivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~a 42 (136)
T 3kto_A 8 IIYLVDHQKDARAALSKLLSPLDV-TIQCFASAESF 42 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSSS-EEEEESSHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCc-EEEEeCCHHHH
Confidence 455555554555556666666676 45444444443
No 424
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=22.09 E-value=1.2e+02 Score=17.30 Aligned_cols=27 Identities=11% Similarity=0.169 Sum_probs=11.0
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
.++..|.++..+ ...+....+ ++.+++
T Consensus 28 ~vv~~~~~~~~a---~~~~~~~~~-dlil~D 54 (120)
T 1tmy_A 28 EVAGEATNGREA---VEKYKELKP-DIVTMD 54 (120)
T ss_dssp EEEEEESSHHHH---HHHHHHHCC-SEEEEE
T ss_pred EEEEEECCHHHH---HHHHHhcCC-CEEEEe
Confidence 334445544322 233444344 344443
No 425
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=21.91 E-value=83 Score=21.67 Aligned_cols=31 Identities=19% Similarity=0.138 Sum_probs=23.9
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
.+-.++|.+...+.-+...|++.|..++.++
T Consensus 195 ~~~ai~~~~d~~a~g~~~al~~~g~~di~vi 225 (293)
T 3l6u_A 195 PFDAVYCHNDDIAMGVLEALKKAKISGKIVV 225 (293)
T ss_dssp CCSEEEESSHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCCEEEECCchHHHHHHHHHHhCCCCCeEEE
Confidence 3446778888888888999999998766654
No 426
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=21.81 E-value=1.5e+02 Score=18.19 Aligned_cols=25 Identities=12% Similarity=0.093 Sum_probs=12.9
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
+|+++.+.......+...|...||.
T Consensus 38 ~Ilivdd~~~~~~~l~~~L~~~g~~ 62 (157)
T 3hzh_A 38 NVLIVDDSVFTVKQLTQIFTSEGFN 62 (157)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCCe
Confidence 3444444444444555566666663
No 427
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=21.73 E-value=1.7e+02 Score=22.87 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=25.5
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCcee--EccccH
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGIT--DIAGGF 139 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~--~l~GG~ 139 (151)
+.++++-...|..|..++..|.+.|+ ++. .++-|+
T Consensus 209 ~~kvvvalSGGvDSsvla~ll~~~g~-~v~av~vd~g~ 245 (503)
T 2ywb_A 209 KDRVLLAVSGGVDSSTLALLLAKAGV-DHLAVFVDHGL 245 (503)
T ss_dssp TSEEEEEECSSHHHHHHHHHHHHHTC-EEEEEEEECSC
T ss_pred CccEEEEecCCcchHHHHHHHHHcCC-eEEEEEEeCCC
Confidence 46788888889999999988888886 443 344443
No 428
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=21.67 E-value=1.4e+02 Score=21.63 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=17.5
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCC
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFA 130 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~ 130 (151)
.++++...+ ..|..++..|.+.|++
T Consensus 180 ~kvlvllSG-vDS~vaa~ll~~~G~~ 204 (307)
T 1vbk_A 180 GRMIGILHD-ELSALAIFLMMKRGVE 204 (307)
T ss_dssp CEEEEECSS-HHHHHHHHHHHHBTCE
T ss_pred CcEEEEEeC-CcHHHHHHHHHhCCCe
Confidence 345555455 7788888888888884
No 429
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=21.49 E-value=1.3e+02 Score=17.35 Aligned_cols=14 Identities=0% Similarity=-0.137 Sum_probs=5.7
Q ss_pred HHHHHCCCCceeEcc
Q 031899 122 TDLLNAGFAGITDIA 136 (151)
Q Consensus 122 ~~L~~~G~~~v~~l~ 136 (151)
..+....+ ++.+++
T Consensus 41 ~~~~~~~~-dlvl~D 54 (124)
T 1srr_A 41 DIVTKERP-DLVLLD 54 (124)
T ss_dssp HHHHHHCC-SEEEEE
T ss_pred HHHhccCC-CEEEEe
Confidence 33344344 344443
No 430
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=21.41 E-value=90 Score=21.57 Aligned_cols=29 Identities=10% Similarity=-0.142 Sum_probs=21.9
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+-.++|.+.. +.-+...|++.|.+++.++
T Consensus 201 ~~ai~~~~d~-a~g~~~al~~~g~~di~vi 229 (304)
T 3gbv_A 201 VKHGITFNSK-VYIIGEYLQQRRKSDFSLI 229 (304)
T ss_dssp CCEEEESSSC-THHHHHHHHHTTCCSCEEE
T ss_pred eEEEEEcCcc-hHHHHHHHHHcCCCCcEEE
Confidence 4466677777 7788999999998666654
No 431
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=21.39 E-value=1e+02 Score=22.69 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=22.8
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.|+| .+.|.....+|..|.+.|+ +|.+++-
T Consensus 25 dV~I-VGaG~aGl~~A~~La~~G~-~V~v~E~ 54 (407)
T 3rp8_A 25 KAIV-IGAGIGGLSAAVALKQSGI-DCDVYEA 54 (407)
T ss_dssp EEEE-ECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred EEEE-ECCCHHHHHHHHHHHhCCC-CEEEEeC
Confidence 4444 5778777788999999998 5877763
No 432
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=21.32 E-value=2.2e+02 Score=20.13 Aligned_cols=34 Identities=26% Similarity=0.162 Sum_probs=24.9
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.++++++. +.|..+..++..|.+.|..++.+++-
T Consensus 124 ~~~~~lil-GaGGaarai~~aL~~~g~~~i~i~nR 157 (269)
T 3tum_A 124 AGKRALVI-GCGGVGSAIAYALAEAGIASITLCDP 157 (269)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred ccCeEEEE-ecHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 45565554 66767777888899999988887753
No 433
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=21.31 E-value=1.8e+02 Score=20.67 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=23.9
Q ss_pred CCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 104 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 104 ~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
++++++. +.|..+..++..|.+.|+.+|.++.-
T Consensus 120 ~k~~lvl-GaGg~~~aia~~L~~~G~~~v~i~~R 152 (272)
T 3pwz_A 120 NRRVLLL-GAGGAVRGALLPFLQAGPSELVIANR 152 (272)
T ss_dssp TSEEEEE-CCSHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEE-CccHHHHHHHHHHHHcCCCEEEEEeC
Confidence 4555555 56766777888999999878877653
No 434
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=21.30 E-value=75 Score=21.78 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=24.1
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+-.++|.+...+.-+...|++.|++++.++
T Consensus 183 ~~ai~~~nD~~A~g~~~al~~~g~~dv~vv 212 (271)
T 2dri_A 183 VQAVFAQNDEMALGALRALQTAGKSDVMVV 212 (271)
T ss_dssp CCEEEESSHHHHHHHHHHHHHHTCCSCEEE
T ss_pred ccEEEECCCcHHHHHHHHHHHcCCCCcEEE
Confidence 456778888888888999999999777654
No 435
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=21.29 E-value=1.2e+02 Score=21.43 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=22.0
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
++.+|+|...+|.-...++..|.+.|+ +|..+
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~ 44 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGY-RVHGL 44 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 456777777778777778888888887 46554
No 436
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=21.18 E-value=1.5e+02 Score=20.88 Aligned_cols=32 Identities=16% Similarity=0.275 Sum_probs=21.9
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+++.|+|...+|.-...++..|.+.|+ +|..+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~ 41 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGT 41 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEE
Confidence 355677766677666677788877887 46544
No 437
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=21.18 E-value=1.3e+02 Score=21.09 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=23.3
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
+++++ +.|..+..++..|.+.|++++.+++-
T Consensus 110 ~vlii-GaGg~a~ai~~~L~~~G~~~I~v~nR 140 (253)
T 3u62_A 110 PVVVV-GAGGAARAVIYALLQMGVKDIWVVNR 140 (253)
T ss_dssp SEEEE-CCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred eEEEE-CcHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 55554 66777777888899999988887654
No 438
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=21.17 E-value=1.7e+02 Score=18.54 Aligned_cols=43 Identities=9% Similarity=0.066 Sum_probs=23.9
Q ss_pred HHHHHhc--cCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 94 VEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 94 ~~~~~~~--~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
+...... ++.++-|++.++-|.-+..+.....+.+. ++.++.|
T Consensus 51 i~~~i~~~~~d~g~GVLiL~DmGSp~n~a~~l~~~~~~-~v~vI~g 95 (139)
T 3gdw_A 51 LRNQVITQKESLNNGILLLTDMGSLNSFGNMLFEETGI-RTKAITM 95 (139)
T ss_dssp HHHHHHTSTGGGTTCEEEEECSGGGGGHHHHHHHHHCC-CEEEECS
T ss_pred HHHHHHhhcCCCCCCEEEEEeCCCHHHHHHHHHHhhCC-CEEEEeC
Confidence 3444444 44566788888876444434444444354 5777765
No 439
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=21.16 E-value=1.6e+02 Score=18.33 Aligned_cols=19 Identities=32% Similarity=0.405 Sum_probs=9.7
Q ss_pred HHHHHHHCCCCceeEcccc
Q 031899 120 AATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 120 ~~~~L~~~G~~~v~~l~GG 138 (151)
....|++.|..++.++-||
T Consensus 74 ~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 74 LRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp HHHHHHHTTCTTCEEEEEE
T ss_pred HHHHHHhcCCCCCEEEEEC
Confidence 4445555555445555555
No 440
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=21.12 E-value=1.4e+02 Score=17.75 Aligned_cols=11 Identities=9% Similarity=-0.019 Sum_probs=4.7
Q ss_pred HHHHHHHHCCC
Q 031899 119 MAATDLLNAGF 129 (151)
Q Consensus 119 ~~~~~L~~~G~ 129 (151)
.+...|...|+
T Consensus 20 ~l~~~L~~~~~ 30 (144)
T 3kht_A 20 LIRRVLDRKDI 30 (144)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 34444444444
No 441
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=21.05 E-value=1.3e+02 Score=21.73 Aligned_cols=30 Identities=17% Similarity=0.040 Sum_probs=23.1
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.|+| .+.|.....+|..|.+.|+ +|.+++-
T Consensus 19 dvvI-IGgG~~Gl~~A~~La~~G~-~V~llE~ 48 (382)
T 1ryi_A 19 EAVV-IGGGIIGSAIAYYLAKENK-NTALFES 48 (382)
T ss_dssp EEEE-ECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CEEE-ECcCHHHHHHHHHHHhCCC-cEEEEeC
Confidence 4554 4788777788999999998 6888863
No 442
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.02 E-value=1.5e+02 Score=20.19 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=22.3
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
+++.++|...++.-...++..|.+.|+ +|.+++
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~ 50 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICA 50 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEc
Confidence 355666666666666678888888898 466543
No 443
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=21.01 E-value=2e+02 Score=23.04 Aligned_cols=16 Identities=25% Similarity=0.310 Sum_probs=11.9
Q ss_pred CCCeEEEEeCCC-hhHH
Q 031899 103 KHDEIIVGCQSG-KRSM 118 (151)
Q Consensus 103 ~~~~iv~~c~~g-~~a~ 118 (151)
...||||+|..| .|+.
T Consensus 222 ~~~PivVHCsaGvGRTG 238 (610)
T 1ygr_A 222 FSGPIVVHSSAGVGRTG 238 (610)
T ss_dssp TCCCEEEECSSSSHHHH
T ss_pred CCCCeEEEcCCCCCchh
Confidence 357999999987 4543
No 444
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.88 E-value=1.2e+02 Score=18.14 Aligned_cols=25 Identities=12% Similarity=0.114 Sum_probs=10.9
Q ss_pred EEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 108 IVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 108 v~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
|..|.++.. +...+....+ ++.+++
T Consensus 31 v~~~~~~~~---a~~~l~~~~~-dlvllD 55 (137)
T 3cfy_A 31 IFHVETGRD---AIQFIERSKP-QLIILD 55 (137)
T ss_dssp EEEESSHHH---HHHHHHHHCC-SEEEEC
T ss_pred EEEeCCHHH---HHHHHHhcCC-CEEEEe
Confidence 344555432 3334444444 455443
No 445
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.87 E-value=1.4e+02 Score=17.67 Aligned_cols=13 Identities=15% Similarity=-0.051 Sum_probs=5.5
Q ss_pred HHHHHHHHHHCCC
Q 031899 117 SMMAATDLLNAGF 129 (151)
Q Consensus 117 a~~~~~~L~~~G~ 129 (151)
.......|...|+
T Consensus 19 ~~~l~~~L~~~g~ 31 (149)
T 1k66_A 19 FSTFQRLLQREGV 31 (149)
T ss_dssp HHHHHHHHHHTTB
T ss_pred HHHHHHHHHHcCC
Confidence 3334444444444
No 446
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=20.79 E-value=1.5e+02 Score=20.49 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=15.0
Q ss_pred CeEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 105 DEIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 105 ~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+.++|...++.-...++..|.+.|+ +|.++
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~-~V~~~ 62 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGL-KVVGC 62 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEE
Confidence 3444444444444455555555665 34433
No 447
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=20.78 E-value=1.3e+02 Score=21.40 Aligned_cols=34 Identities=26% Similarity=0.354 Sum_probs=24.4
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.+++++++ +.|..+..++..|.+.|..++.+++-
T Consensus 118 ~~~~vlvl-GaGgaarav~~~L~~~G~~~i~v~nR 151 (271)
T 1npy_A 118 KNAKVIVH-GSGGMAKAVVAAFKNSGFEKLKIYAR 151 (271)
T ss_dssp TTSCEEEE-CSSTTHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCEEEEE-CCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 44566655 56666666788899999988887754
No 448
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=20.76 E-value=71 Score=19.63 Aligned_cols=21 Identities=29% Similarity=0.300 Sum_probs=12.9
Q ss_pred CeEEEEeCCC---hhHHHHHHHHH
Q 031899 105 DEIIVGCQSG---KRSMMAATDLL 125 (151)
Q Consensus 105 ~~iv~~c~~g---~~a~~~~~~L~ 125 (151)
+-.|.||... .|+...++.|.
T Consensus 10 ~V~I~YC~~C~w~lRa~~laqeLl 33 (108)
T 2ojl_A 10 RIAIQYCTQCQWLLRAAWMAQELL 33 (108)
T ss_dssp EEEEEEETTTTCHHHHHHHHHHHH
T ss_pred EEEEEECCCCCChHHHHHHHHHHH
Confidence 3468999865 45555555543
No 449
>4ddu_A Reverse gyrase; topoisomerase, DNA supercoiling, archaea, helicase, hydrolas; 3.00A {Thermotoga maritima} PDB: 4ddt_A 4ddv_A 4ddw_A 4ddx_A
Probab=20.75 E-value=1e+02 Score=26.77 Aligned_cols=42 Identities=17% Similarity=0.133 Sum_probs=31.0
Q ss_pred HHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCcee-Eccc
Q 031899 93 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGIT-DIAG 137 (151)
Q Consensus 93 ~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~-~l~G 137 (151)
.+..+.... +.++++||++-..+..++..|...|+ ++. .+.|
T Consensus 300 ~L~~ll~~~--~~~~LVF~~s~~~a~~l~~~L~~~g~-~~~~~lhg 342 (1104)
T 4ddu_A 300 KLVELLEIF--RDGILIFAQTEEEGKELYEYLKRFKF-NVGETWSE 342 (1104)
T ss_dssp HHHHHHHHH--CSSEEEEESSSHHHHHHHHHHHHTTC-CEEESSSS
T ss_pred HHHHHHHhc--CCCEEEEECcHHHHHHHHHHHHhCCC-CeeeEecC
Confidence 344444433 36789999999999999999999998 465 5655
No 450
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=20.74 E-value=80 Score=22.81 Aligned_cols=33 Identities=6% Similarity=-0.081 Sum_probs=26.0
Q ss_pred cCCCCeEEEEeC---CChhHHHHHHHHHHCCCCcee
Q 031899 101 FRKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 101 ~~~~~~iv~~c~---~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+.++++|+++.+ +|.....++..|++.|.+.|.
T Consensus 193 l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~ 228 (291)
T 1o57_A 193 MKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAG 228 (291)
T ss_dssp SCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEE
T ss_pred CCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEE
Confidence 346788888875 788888899999999986544
No 451
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=20.70 E-value=91 Score=21.47 Aligned_cols=30 Identities=17% Similarity=0.069 Sum_probs=22.7
Q ss_pred eEEEEeCCChhHHHHHHHHHHCCCCceeEc
Q 031899 106 EIIVGCQSGKRSMMAATDLLNAGFAGITDI 135 (151)
Q Consensus 106 ~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l 135 (151)
+-.++|.+...+..+...|++.|++++.++
T Consensus 192 ~~ai~~~~d~~a~g~~~al~~~g~~dv~vi 221 (290)
T 2fn9_A 192 IKAIWCGNDAMALGAMKACEAAGRTDIYIF 221 (290)
T ss_dssp CCEEEESSHHHHHHHHHHHHHTTCTTCEEE
T ss_pred CcEEEECCchHHHHHHHHHHHCCCCCeEEE
Confidence 445668777777788899999998667654
No 452
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=20.64 E-value=2.6e+02 Score=20.65 Aligned_cols=45 Identities=13% Similarity=0.163 Sum_probs=30.9
Q ss_pred CHHHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCceeEcc
Q 031899 90 NLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 90 ~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~ 136 (151)
+.+....+...+...++++++ +.|..+..++..|.+.|. +|.++.
T Consensus 129 ~~~d~~~l~~~~~~~~~vvVi-GgG~~g~E~A~~l~~~g~-~Vtvv~ 173 (410)
T 3ef6_A 129 TYGDVQVLRDSWTSATRLLIV-GGGLIGCEVATTARKLGL-SVTILE 173 (410)
T ss_dssp SHHHHHHHHHHCCTTCEEEEE-CCSHHHHHHHHHHHHTTC-EEEEEC
T ss_pred cHHHHHHHHHHhccCCeEEEE-CCCHHHHHHHHHHHhCCC-eEEEEe
Confidence 334445555556566777665 677788889999999997 577664
No 453
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=20.43 E-value=1.9e+02 Score=18.82 Aligned_cols=54 Identities=19% Similarity=0.289 Sum_probs=31.5
Q ss_pred HHhCCCEEEecCChhhHhcCCCCCceeeccccccCCCCCCCHHHHHHHHhccCCCCeEEEEeCCChhHHHHHH
Q 031899 50 LLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAAT 122 (151)
Q Consensus 50 ~~~~~~~iiDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~ 122 (151)
+.+.+..++|+-+..+ . .++..|- +.......+.+...-|++|.+|.-.+.+|.
T Consensus 29 L~~~G~eV~D~G~~~~---~---~~~dYpd-------------~a~~va~~V~~~d~GIliCGTGiG~siaAN 82 (148)
T 4em8_A 29 LRDLGCEVFDCGCDPK---E---HSVDYPD-------------YVHDVVREVSDTSFGVLICGTGIGMSIAAN 82 (148)
T ss_dssp HHHTTCEEEECCCCTT---C---SCCCGGG-------------GTHHHHTTCBTTBEEEEEESSSHHHHHHHT
T ss_pred HHHCCCEEEEeCCCCC---C---CCCChHH-------------HHHHHHHHHHHhCeEEEEccCcHHHHHHHh
Confidence 3356799999976431 1 0333442 333444443355677999999966555554
No 454
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=20.36 E-value=66 Score=24.24 Aligned_cols=26 Identities=12% Similarity=0.054 Sum_probs=21.6
Q ss_pred HHHHHHHHHHCCCCceeEccccHHHHH
Q 031899 117 SMMAATDLLNAGFAGITDIAGGFAAWR 143 (151)
Q Consensus 117 a~~~~~~L~~~G~~~v~~l~GG~~~W~ 143 (151)
...+...|++.|+ .|+++.||+..+.
T Consensus 226 ~~eLi~~L~~~G~-~v~IVSgg~~~~v 251 (385)
T 4gxt_A 226 MVDLYRSLEENGI-DCYIVSASFIDIV 251 (385)
T ss_dssp HHHHHHHHHHTTC-EEEEEEEEEHHHH
T ss_pred HHHHHHHHHHCCC-eEEEEcCCcHHHH
Confidence 5568889999999 5999999987654
No 455
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=20.32 E-value=77 Score=21.10 Aligned_cols=25 Identities=20% Similarity=0.129 Sum_probs=19.0
Q ss_pred CCCCeEEEEeCCChhHHHHHHHHHH
Q 031899 102 RKHDEIIVGCQSGKRSMMAATDLLN 126 (151)
Q Consensus 102 ~~~~~iv~~c~~g~~a~~~~~~L~~ 126 (151)
..+.+|++.|.++..+..+...|..
T Consensus 144 AGDDTIlVi~r~~~~a~~l~~~l~~ 168 (170)
T 3lap_A 144 AGDDTILVVAREPTTGAQLAGMFEN 168 (170)
T ss_dssp ECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred ecCCEEEEEeCCHHHHHHHHHHHHh
Confidence 4677888888888777777777655
No 456
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.21 E-value=1.8e+02 Score=18.64 Aligned_cols=42 Identities=12% Similarity=0.069 Sum_probs=28.1
Q ss_pred HHHHHhccCCCCeEEEEeCCCh--hHHHHHHHHHHCCCCceeEcc
Q 031899 94 VEEVSTRFRKHDEIIVGCQSGK--RSMMAATDLLNAGFAGITDIA 136 (151)
Q Consensus 94 ~~~~~~~~~~~~~iv~~c~~g~--~a~~~~~~L~~~G~~~v~~l~ 136 (151)
+......++++..+|+++.+|. ....++..+++.|.+ +..+.
T Consensus 78 ~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~-vi~IT 121 (187)
T 3sho_A 78 LTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVP-TMALT 121 (187)
T ss_dssp HHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCC-EEEEE
T ss_pred HHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCC-EEEEe
Confidence 3344455677777888888884 344678888999985 44443
No 457
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=20.20 E-value=2.6e+02 Score=20.37 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=24.2
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.+++++|. +.|.-+..++..|.+.|.++|.+..-
T Consensus 153 ~gk~~lVl-GaGG~g~aia~~L~~~Ga~~V~i~nR 186 (315)
T 3tnl_A 153 IGKKMTIC-GAGGAATAICIQAALDGVKEISIFNR 186 (315)
T ss_dssp TTSEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred cCCEEEEE-CCChHHHHHHHHHHHCCCCEEEEEEC
Confidence 35556555 55766777888999999987876643
No 458
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=20.20 E-value=1.6e+02 Score=20.97 Aligned_cols=34 Identities=24% Similarity=0.143 Sum_probs=24.2
Q ss_pred CCCeEEEEeCCChhHHHHHHHHHHCCCCceeEccc
Q 031899 103 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 137 (151)
Q Consensus 103 ~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~~l~G 137 (151)
.++++++. +.|..+..++..|.+.|+.+|.+++-
T Consensus 125 ~~k~vlvl-GaGg~g~aia~~L~~~G~~~v~v~~R 158 (281)
T 3o8q_A 125 KGATILLI-GAGGAARGVLKPLLDQQPASITVTNR 158 (281)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHTTCCSEEEEEES
T ss_pred cCCEEEEE-CchHHHHHHHHHHHhcCCCeEEEEEC
Confidence 34555555 56766777888999999878877653
No 459
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=20.17 E-value=1.6e+02 Score=21.00 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=26.6
Q ss_pred HHHHHHHhccCCCCeEEEEeCCChhHHHHHHHHHHCCCCcee
Q 031899 92 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGIT 133 (151)
Q Consensus 92 ~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~L~~~G~~~v~ 133 (151)
+.+..+...++.+.++| +.+|..+..-+..+.+.|.+-+.
T Consensus 201 ~~~~~l~~~v~~~~pvV--aegGI~t~edv~~l~~~Gadgvl 240 (272)
T 3qja_A 201 DCFARIAPGLPSSVIRI--AESGVRGTADLLAYAGAGADAVL 240 (272)
T ss_dssp THHHHHGGGSCTTSEEE--EESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCcccCEEE--EECCCCCHHHHHHHHHcCCCEEE
Confidence 45566666665554444 67887766667788889986543
No 460
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=20.14 E-value=1.3e+02 Score=23.46 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=23.4
Q ss_pred EEEeCCChhHHHHHHHHHHCCCCceeEcccc
Q 031899 108 IVGCQSGKRSMMAATDLLNAGFAGITDIAGG 138 (151)
Q Consensus 108 v~~c~~g~~a~~~~~~L~~~G~~~v~~l~GG 138 (151)
+++.++|.-...+|..|.+.|+ +|.+|+.|
T Consensus 10 ~iIvG~G~aG~~~A~~L~~~g~-~VlvlE~g 39 (546)
T 1kdg_A 10 YIIVGAGPGGIIAADRLSEAGK-KVLLLERG 39 (546)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3445788777788999998998 68888765
No 461
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=20.13 E-value=1.4e+02 Score=17.20 Aligned_cols=23 Identities=26% Similarity=0.224 Sum_probs=9.6
Q ss_pred EEEEeCCChhHHHHHHHHHHCCC
Q 031899 107 IIVGCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 107 iv~~c~~g~~a~~~~~~L~~~G~ 129 (151)
|+++.+...........|...||
T Consensus 5 ilivdd~~~~~~~l~~~l~~~g~ 27 (127)
T 2jba_A 5 ILVVEDEAPIREMVCFVLEQNGF 27 (127)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC
T ss_pred EEEEcCCHHHHHHHHHHHHHCCc
Confidence 33333333333344444555555
No 462
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=20.11 E-value=2e+02 Score=19.14 Aligned_cols=8 Identities=13% Similarity=0.322 Sum_probs=3.7
Q ss_pred EEEEeCCC
Q 031899 107 IIVGCQSG 114 (151)
Q Consensus 107 iv~~c~~g 114 (151)
.++++++|
T Consensus 72 ~~v~vd~g 79 (215)
T 1sur_A 72 PVILTDTG 79 (215)
T ss_dssp EEEEEECS
T ss_pred eEEEeeCC
Confidence 34444444
No 463
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=20.09 E-value=1.5e+02 Score=17.46 Aligned_cols=14 Identities=14% Similarity=0.166 Sum_probs=5.9
Q ss_pred HHHHHCCCCceeEcc
Q 031899 122 TDLLNAGFAGITDIA 136 (151)
Q Consensus 122 ~~L~~~G~~~v~~l~ 136 (151)
..+....+ ++.+++
T Consensus 41 ~~~~~~~~-dlvl~D 54 (132)
T 3crn_A 41 AKIENEFF-NLALFX 54 (132)
T ss_dssp HHHHHSCC-SEEEEC
T ss_pred HHHhcCCC-CEEEEe
Confidence 33444444 344443
No 464
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=20.03 E-value=47 Score=22.61 Aligned_cols=20 Identities=10% Similarity=0.182 Sum_probs=10.1
Q ss_pred EeCCChhHHHHHHHHHHCCC
Q 031899 110 GCQSGKRSMMAATDLLNAGF 129 (151)
Q Consensus 110 ~c~~g~~a~~~~~~L~~~G~ 129 (151)
+|+.|.-+..++..|.+.|+
T Consensus 14 I~G~G~~G~~la~~L~~~g~ 33 (234)
T 2aef_A 14 ICGWSESTLECLRELRGSEV 33 (234)
T ss_dssp EESCCHHHHHHHHHSTTSEE
T ss_pred EECCChHHHHHHHHHHhCCe
Confidence 34445445555555555554
Done!