BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031903
(150 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 261 bits (668), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 129/148 (87%), Positives = 143/148 (96%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
+++L+ EQIV+FKEAF LFDKDGDGCITVEELATVIRSLDQNPTEEELQDMI+EVD+D N
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
GTIEF EFL+LMAKK+K+TDAEEELKEAFKVFDKDQNGYISA+ELRHVMINLGEKLTD+E
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 122 VEQMINEADLDGDGQVNYDEFVKMMMTI 149
VEQMI EADLDGDGQVNY+EFVKMMMT+
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMMMTV 148
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 239 bits (611), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/148 (78%), Positives = 134/148 (90%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT +QI EFKEAF LFDKDGDGCIT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFLNLMA+KMK+TD+EEELKEAF+VFDKDQNG+ISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMT 148
EV++MI EAD+DGDGQ+NYDEFVK+MM
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMA 148
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D D +G I + EF+
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVK 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 VMMAK 149
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 238 bits (608), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/148 (77%), Positives = 135/148 (91%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT++QI EFKEAF LFDKDGDGCIT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFLNLMA+KMK+TD+EEELKEAF+VFDKDQNG+ISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMT 148
EV++MI EAD+DGDGQ+NY+EFVK+MM
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D D +G I + EF+
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 VMMAK 149
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 232 bits (592), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/146 (76%), Positives = 130/146 (89%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV+QMI EAD+DGDGQVNY+EFV+MM
Sbjct: 121 EVDQMIREADIDGDGQVNYEEFVQMM 146
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ MI E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQ 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 MMTAK 149
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 232 bits (592), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 113/144 (78%), Positives = 130/144 (90%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT+EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFLNLMA+KMK+TD+EEELKEAF+VFDKD NG+ISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMMMT 148
MI EAD+DGDGQVNY+EFV++MM
Sbjct: 124 MIREADVDGDGQVNYEEFVQVMMA 147
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 84 ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 VMMAK 148
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 232 bits (591), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 113/144 (78%), Positives = 130/144 (90%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT+EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFLNLMA+KMK+TD+EEELKEAF+VFDKD NG+ISA ELRHVM NLGEKLTD+EV++
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 125 MINEADLDGDGQVNYDEFVKMMMT 148
MI EAD+DGDGQVNY+EFV++MM
Sbjct: 121 MIREADVDGDGQVNYEEFVQVMMA 144
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 81 ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 140
Query: 72 LMAKK 76
+M K
Sbjct: 141 VMMAK 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 231 bits (589), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 130/146 (89%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++MI EAD+DGDGQVNY+EFV+MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 231 bits (589), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 130/146 (89%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 63
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 64 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 123
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++MI EAD+DGDGQVNY+EFV+MM
Sbjct: 124 EVDEMIREADIDGDGQVNYEEFVQMM 149
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 88 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 147
Query: 72 LMAKK 76
+M K
Sbjct: 148 MMTAK 152
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 231 bits (588), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 130/146 (89%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++MI EAD+DGDGQVNY+EFV+MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 MMTAK 149
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 231 bits (588), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 130/144 (90%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT+EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFLNLMA+KMK+TD+EE+LKEAF+VFDKD NG+ISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMMMT 148
MI EAD+DGDGQVNY+EFV++MM
Sbjct: 124 MIREADVDGDGQVNYEEFVQVMMA 147
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
+ KEAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 84 KLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 VMMAK 148
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 231 bits (588), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 130/146 (89%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 121
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++MI EAD+DGDGQVNY+EFV+MM
Sbjct: 122 EVDEMIREADIDGDGQVNYEEFVQMM 147
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 86 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 145
Query: 72 LMAKK 76
+M K
Sbjct: 146 MMTAK 150
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 230 bits (587), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 130/146 (89%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++MI EAD+DGDGQVNY+EFV+MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 MMTAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 230 bits (587), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 130/146 (89%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++MI EAD+DGDGQVNY+EFV+MM
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 72 LMAKKM 77
+M K+
Sbjct: 145 MMTAKL 150
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 230 bits (586), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 72 LMAKK 76
+M K
Sbjct: 445 MMTAK 449
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 230 bits (586), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 72 LMAKK 76
+M K
Sbjct: 445 MMTAK 449
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 230 bits (586), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 426 MIREADIDGDGQVNYEEFVQMM 447
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 386 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 445
Query: 72 LMAKK 76
+M K
Sbjct: 446 MMTAK 450
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 229 bits (585), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/148 (75%), Positives = 130/148 (87%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NG+ISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMT 148
EV++MI EAD+DGDGQVNY+EFV MM T
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTT 148
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 MMTTK 149
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 229 bits (584), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 388 MIREADIDGDGQVNYEEFVQMM 409
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 229 bits (583), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 391 MIREADIDGDGQVNYEEFVQMM 412
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
Query: 72 LMAKK 76
+M K
Sbjct: 411 MMTAK 415
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 229 bits (583), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 126/142 (88%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 72 LMAKK 76
+M K
Sbjct: 445 MMTAK 449
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 229 bits (583), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 391 MIREADIDGDGQVNYEEFVQMM 412
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
Query: 72 LMAKK 76
+M K
Sbjct: 411 MMTAK 415
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 229 bits (583), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Query: 72 LMAKK 76
+M K
Sbjct: 142 MMTAK 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 229 bits (583), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 129
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 130 MIREADIDGDGQVNYEEFVQMM 151
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 90 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 149
Query: 72 LMAKK 76
+M K
Sbjct: 150 MMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 229 bits (583), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 MMTAK 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 229 bits (583), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 228 bits (582), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 110/148 (74%), Positives = 130/148 (87%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NG+ISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMT 148
EV++MI EAD+DGDGQVNY+EFV MM +
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 MMTSK 149
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 228 bits (582), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 121 MIREADIDGDGQVNYEEFVQMM 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 228 bits (581), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 228 bits (581), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 123 MIREADIDGDGQVNYEEFVQMM 144
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 228 bits (580), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D +GTI
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 424 MIREADIDGDGQVNYEEFVQMM 445
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 72 LMAKK 76
+M K
Sbjct: 444 MMTAK 448
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 228 bits (580), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 126/142 (88%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+ MK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 72 LMAKK 76
+M K
Sbjct: 445 MMTAK 449
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D +GTI
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 415
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 416 MIREADIDGDGQVNYEEFVQMM 437
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 376 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 435
Query: 72 LMAKK 76
+M K
Sbjct: 436 MMTAK 440
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/146 (74%), Positives = 128/146 (87%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
+ + LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
+GTI+F EFL +MA+KMK TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++MI EAD+DGDGQVNY+EFV+MM
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 72 LMAKK 76
+M K
Sbjct: 444 MMTAK 448
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/148 (73%), Positives = 130/148 (87%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M++ LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NG+ISA ELRHVM NLGEKLTD+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMT 148
EV++MI E+D+DGDGQVNY+EFV MM +
Sbjct: 121 EVDEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVT 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 MMTSK 149
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/141 (77%), Positives = 126/141 (89%)
Query: 6 TNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIE 65
T EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI+
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 66 FGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQM 125
F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++M
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 126 INEADLDGDGQVNYDEFVKMM 146
I EAD+DGDGQVNY+EFV+MM
Sbjct: 123 IREADIDGDGQVNYEEFVQMM 143
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Query: 72 LMAKK 76
+M K
Sbjct: 142 MMTAK 146
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/146 (74%), Positives = 128/146 (87%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
+ + LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
+GTI+F EFL +MA+KMK TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++MI EAD+DGDGQVNY+EFV+MM
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 72 LMAKK 76
+M K
Sbjct: 444 MMTAK 448
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 227 bits (578), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 126/142 (88%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D +GTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 72 LMAKK 76
+M K
Sbjct: 445 MMTAK 449
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 227 bits (578), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EA++DGDGQVNY+EFV+MM
Sbjct: 124 MIREANIDGDGQVNYEEFVQMM 145
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E + D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 MMTAK 148
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 227 bits (578), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/147 (75%), Positives = 128/147 (87%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
+E LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D N
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
GTI+F EFL+LMA+KMKE D+EEEL EAFKVFD+D NG ISA ELRHVM NLGEKLTDDE
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE 120
Query: 122 VEQMINEADLDGDGQVNYDEFVKMMMT 148
V++MI EAD+DGDG +NY+EFV+MM++
Sbjct: 121 VDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E EAF +FD+DG+G I+ EL V+ +L + T++E+ +MI E D D +G I + EF+
Sbjct: 84 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 MMVSK 148
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 227 bits (578), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 127/142 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D +GTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 MMTAK 148
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 226 bits (577), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/141 (77%), Positives = 126/141 (89%)
Query: 6 TNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIE 65
T EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI+
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 66 FGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQM 125
F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++M
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 126 INEADLDGDGQVNYDEFVKMM 146
I EAD+DGDGQVNY+EFV+MM
Sbjct: 121 IREADIDGDGQVNYEEFVQMM 141
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 80 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 139
Query: 72 LMAKK 76
+M K
Sbjct: 140 MMTAK 144
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 226 bits (577), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 127/144 (88%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NG+ISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMMMT 148
MI EAD+DGDGQVNY+EFV MM +
Sbjct: 124 MIREADIDGDGQVNYEEFVTMMTS 147
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 MMTSK 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 226 bits (577), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 126/142 (88%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGE LTD+EV++
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 124
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 72 LMAKK 76
+M K
Sbjct: 145 MMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 226 bits (577), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 126/142 (88%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGE LTD+EV++
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV+MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 MMTAK 148
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 226 bits (576), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 126/142 (88%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NG+ISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD+DGDGQVNY+EFV MM
Sbjct: 124 MIREADIDGDGQVNYEEFVTMM 145
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 MMTAK 148
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 226 bits (575), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/144 (76%), Positives = 126/144 (87%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL+LMA+KMKE D+EEEL EAFKVFD+D NG ISA ELRHVM NLGEKLTDDEV++
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMMMT 148
MI EAD+DGDG +NY+EFV+MM++
Sbjct: 124 MIREADIDGDGHINYEEFVRMMVS 147
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E EAF +FD+DG+G I+ EL V+ +L + T++E+ +MI E D D +G I + EF+
Sbjct: 84 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 143
Query: 72 LMAKK 76
+M K
Sbjct: 144 MMVSK 148
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 219 bits (558), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 125/144 (86%), Gaps = 2/144 (1%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK D+EEE++EAF+VFDKD NG+ISA ELRHVM NLGEKLTD+EV++
Sbjct: 64 DFPEFLTMMARKMK--DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 121
Query: 125 MINEADLDGDGQVNYDEFVKMMMT 148
MI EAD+DGDGQVNY+EFV MM +
Sbjct: 122 MIREADIDGDGQVNYEEFVTMMTS 145
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 82 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 141
Query: 72 LMAKK 76
+M K
Sbjct: 142 MMTSK 146
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 219 bits (558), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/141 (75%), Positives = 125/141 (88%), Gaps = 1/141 (0%)
Query: 6 TNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIE 65
T EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI+
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 66 FGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQM 125
F EFL +MA+KMK+TD+ EE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++M
Sbjct: 61 FPEFLTMMARKMKDTDS-EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 126 INEADLDGDGQVNYDEFVKMM 146
I EA++DGDGQVNY+EFV+MM
Sbjct: 120 IREANIDGDGQVNYEEFVQMM 140
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 36/102 (35%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQV------- 137
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 138 -----------------------------NYDEFVKMMMTIG 150
+ E +M +G
Sbjct: 67 MMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLG 108
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 219 bits (558), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/142 (72%), Positives = 124/142 (87%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT ++L TV+RSL QNPTE ELQDMINEV +D NGTI
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTI 364
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F +FL +MA+KMK+TD+EEE++EAF+VF KD NGYISA +LRHVM NLGEKLTD+EV++
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EA +DGDGQVNY++FV+MM
Sbjct: 425 MIREAGIDGDGQVNYEQFVQMM 446
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +F KDG+G I+ +L V+ +L + T+EE+ +MI E D +G + + +F+
Sbjct: 385 EIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQ 444
Query: 72 LMAKK 76
+M K
Sbjct: 445 MMTAK 449
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 213 bits (542), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 124/144 (86%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQ+ EFKEAF LFDKDGDGCIT EL TV+RSL QNPTE EL+DM++E+D D NGT+
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +MA+KMK+TD EEE++EAF+VFDKD NG++SA ELRHVM LGEKL+D+EV++
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVKMMMT 148
MI AD DGDGQVNY+EFV+++++
Sbjct: 124 MIRAADTDGDGQVNYEEFVRVLVS 147
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G ++ EL V+ L + ++EE+ +MI D+D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVR 143
Query: 72 LMAKK 76
++ K
Sbjct: 144 VLVSK 148
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 212 bits (539), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 118/140 (84%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV RSL QNPTE ELQD INEVD+D NGTI
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL A+K K+TD+EEE++EAF+VFDKD NGYISA ELRHV NLGEKLTD+EV+Q
Sbjct: 65 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQ 124
Query: 125 MINEADLDGDGQVNYDEFVK 144
I EAD+DGDGQVNY+EFV+
Sbjct: 125 XIREADIDGDGQVNYEEFVQ 144
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V +L + T+EE+ I E D D +G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQ 144
Query: 72 LMAKK 76
K
Sbjct: 145 XXTAK 149
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 210 bits (534), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 118/140 (84%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV RSL QNPTE ELQD INEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL A+K K+TD+EEE++EAF+VFDKD NGYISA ELRHV NLGEKLTD+EV++
Sbjct: 64 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVK 144
I EAD+DGDGQVNY+EFV+
Sbjct: 124 XIREADIDGDGQVNYEEFVQ 143
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V +L + T+EE+ + I E D D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Query: 72 LMAKK 76
K
Sbjct: 144 XXTAK 148
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 201 bits (512), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 115/140 (82%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV RSL NPTE ELQD INEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F EFL A+ K+TD+EEE++EAF+VFDKD NGYISA ELRHV NLGEKLTD+EV++
Sbjct: 64 NFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDE 123
Query: 125 MINEADLDGDGQVNYDEFVK 144
I EAD+DGDGQVNY+EFV+
Sbjct: 124 XIREADIDGDGQVNYEEFVQ 143
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V +L + T+EE+ + I E D D +G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Query: 72 LMAKK 76
K
Sbjct: 144 XXTAK 148
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 182 bits (463), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 116/146 (79%), Gaps = 1/146 (0%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
MSE LT EQI EFK+AF FDK+G G I EL T++R+L QNPTE ELQD+I E +++
Sbjct: 1 MSE-LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNN 59
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
NG + F EF +MAK+M+ETD EEE++EAFK+FD+D +G+IS ELR VMINLGEK+TD+
Sbjct: 60 NGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDE 119
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
E+++MI EAD DGDG +NY+EFV M+
Sbjct: 120 EIDEMIREADFDGDGMINYEEFVWMI 145
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FD+DGDG I+ EL V+ +L + T+EE+ +MI E D D +G I + EF+
Sbjct: 84 EMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVW 143
Query: 72 LMAKK 76
++++K
Sbjct: 144 MISQK 148
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 166 bits (419), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 110/146 (75%), Gaps = 1/146 (0%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
MS+ LT EQI EFKEAF LFDKD G I+ ELATV+RSL +P+E E+ D++NE+D D
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
N IEF EFL LM++++K D+E+EL EAFKVFDK+ +G ISA EL+HV+ ++GEKLTD
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
EV++M+ E DG G++N +F ++
Sbjct: 121 EVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 164 bits (414), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
S LT EQI EFKEAF LFDKD +G I+ ELATV+RSL +P+E E+ D++NE+D D N
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
IEF EFL LM++++K D+E+EL EAFKVFDK+ +G ISA EL+HV+ ++GEKLTD E
Sbjct: 62 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
V+ M+ E DG G++N +F ++
Sbjct: 122 VDDMLREVS-DGSGEINIQQFAALL 145
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 163 bits (412), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
S LT EQI EFKEAF LFDKD +G I+ ELATV+RSL +P+E E+ D++NE+D D N
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
IEF EFL LM++++K D+E+EL EAFKVFDK+ +G ISA EL+HV+ ++GEKLTD E
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
V+ M+ E DG G++N +F ++
Sbjct: 121 VDDMLREVS-DGSGEINIQQFAALL 144
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 149 bits (376), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 95/122 (77%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
S LT EQI EFKEAF LFDKD +G I+ ELATV+RSL +P+E E+ D++NE+D D N
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
IEF EFL LM++++K D+E+EL EAFKVFDK+ +G ISA EL+HV+ ++GEKLTD E
Sbjct: 61 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120
Query: 122 VE 123
+E
Sbjct: 121 LE 122
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD NG IS++EL VM +LG ++ EV ++NE D+DG+ Q+ + EF+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+V+EL TV+R L Q PT+EEL +I EVD D +GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 65 EFGEFLNLMAKKMKE---TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
+F EFL +M ++MKE +EEEL E F++FD++ +GYI A EL + GE +TD+E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
+E ++ + D + DG++++DEF+KMM
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 145 MMM 147
MM+
Sbjct: 78 MMV 80
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+V+EL TV+R L Q PT+EEL +I EVD D +GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 65 EFGEFLNLMAKKMKE---TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
+F EFL +M ++MKE +EEEL E F++FD++ +GYI A EL + GE +TD+E
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
+E ++ + D + DG++++DEF+KMM
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 145 MMM 147
MM+
Sbjct: 78 MMV 80
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 137 bits (345), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 99/142 (69%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQ E +EAF LFD DG G I +EL +R+L P +EE++ MI ++D D +GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +M KM E D+ EE+ +AF++FD D+ G IS L+ V LGE +TD+E+++
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI+EAD DGDG+VN +EF ++M
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIM 143
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M E + E+I++ AF LFD D G I+ + L V + L +N T+EELQ+MI+E D D
Sbjct: 74 MGERDSREEIMK---AFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDG 130
Query: 61 NGTIEFGEFLNLMAK 75
+G + EF +M K
Sbjct: 131 DGEVNEEEFFRIMKK 145
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 135 bits (341), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 76/87 (87%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFK 91
+F EFL +MA+KMK+TD+EEE++EAF+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 135 bits (340), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/71 (91%), Positives = 70/71 (98%)
Query: 79 ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVN 138
+TDAEEELKEAFKVFDKDQNGYISA+ELRHVMINLGEKLTD+EVEQMI EADLDGDGQVN
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 139 YDEFVKMMMTI 149
Y+EFVKMMMT+
Sbjct: 64 YEEFVKMMMTV 74
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF +FDKD +G I+ EL V+ +L + T+EE++ MI E D D +G + + EF+
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 72 LM 73
+M
Sbjct: 70 MM 71
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 135 bits (340), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 99/141 (70%)
Query: 6 TNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIE 65
T EQ E +EAF LFD DG G I V+EL +R+L P +EE++ MI+E+D + G +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 66 FGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQM 125
FG+FL +M +KM E D +EE+ +AFK+FD D+ G IS L+ V LGE LTD+E+++M
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 126 INEADLDGDGQVNYDEFVKMM 146
I+EAD DGDG+V+ EF+++M
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
MSE T E+I++ AF LFD D G I+ + L V + L +N T+EELQ+MI+E D D
Sbjct: 72 MSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 128
Query: 61 NGTIEFGEFLNLMAK 75
+G + EFL +M K
Sbjct: 129 DGEVSEQEFLRIMKK 143
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 133 bits (335), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 105/145 (72%), Gaps = 3/145 (2%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ +EL TV+R L QNPT+EEL +I EVD D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 EFGEFLNLMAKKMKE---TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
+F EFL +M ++MKE +EEEL++ F++FDK+ +G+I EL ++ GE +T+++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
+E ++ ++D + DG++++DEF+KMM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 145 MMM 147
MM+
Sbjct: 81 MMV 83
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/79 (82%), Positives = 75/79 (94%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
+++L+ EQIV+FKEAF LFDKDGDGCITVEELATVIRSLDQNPTEEELQDMI+EVD+D N
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIEFGEFLNLMAKKMKET 80
GTIEF EFL+LMAKK+K+T
Sbjct: 61 GTIEFDEFLSLMAKKVKDT 79
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
+ KEAF +FDKD +G I+ EL V+ +L + T++E++ MI+E D DG+G + +DEF+
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 104/145 (71%), Gaps = 3/145 (2%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ +EL TV+R L QNPT+EEL +I EVD D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 EFGEFLNLMAKKMKE---TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
+F EFL +M ++MKE +EEEL + F++FDK+ +G+I EL ++ GE +T+++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
+E ++ ++D + DG++++DEF+KMM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 145 MMM 147
MM+
Sbjct: 81 MMV 83
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 132 bits (333), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ +EL TV+R L QNPT+EEL +I EVD D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 EFGEFLNLMAKKMKE---TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
+F EFL +M ++MKE +EEEL F++FDK+ +G+I EL ++ GE +T+++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
+E ++ ++D + DG++++DEF+KMM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 145 MMM 147
MM+
Sbjct: 81 MMV 83
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 132 bits (333), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 99/142 (69%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQ E +EAF LFD DG G I +EL +R+L P +EE++ MI+E+D D +GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
+F EFL +M KM E D+ EE+ +AF++FD D +G I+ +LR V LGE LT++E+++
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
MI EAD + D +++ DEF+++M
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIM 163
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M E + E+I++ AF LFD D G IT+++L V + L +N TEEELQ+MI E D +
Sbjct: 94 MGERDSREEILK---AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRND 150
Query: 61 NGTIEFGEFLNLMAK 75
+ I+ EF+ +M K
Sbjct: 151 DNEIDEDEFIRIMKK 165
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 132 bits (332), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/69 (92%), Positives = 68/69 (98%)
Query: 81 DAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYD 140
DAEEELKEAFKVFDKDQNGYISA+ELRHVMINLGEKLTD+EVEQMI EADLDGDGQVNY+
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 141 EFVKMMMTI 149
EFVKMMMT+
Sbjct: 61 EFVKMMMTV 69
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF +FDKD +G I+ EL V+ +L + T+EE++ MI E D D +G + + EF+
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 72 LM 73
+M
Sbjct: 65 MM 66
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 132 bits (332), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ +EL TV+R L QNPT+EEL +I EVD D +GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 65 EFGEFLNLMAKKMKE---TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
+F EFL +M ++MKE +EEEL F++FDK+ +G+I EL ++ GE +T+++
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
+E ++ ++D + DG++++DEF+KMM
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 145 MMM 147
MM+
Sbjct: 78 MMV 80
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 102/145 (70%), Gaps = 3/145 (2%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ +EL TV+R L QNPT+EEL +I EVD D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 EFGEFLNLMAKKMKE---TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
+F EFL +M ++MKE +EEEL F++FDK+ +G+I EL ++ GE + +++
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
+E ++ ++D + DG++++DEF+KMM
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 145 MMM 147
MM+
Sbjct: 81 MMV 83
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 129 bits (324), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 72/76 (94%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
+++L+ EQIV+FKEAF LFDKDGDGCITVEELATVIRSLDQNPTEEELQDMI+EVD+D N
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 62 GTIEFGEFLNLMAKKM 77
GTIEF EFL+LMAKK+
Sbjct: 61 GTIEFDEFLSLMAKKV 76
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
+ KEAF +FDKD +G I+ EL V+ +L + T++E++ MI+E D DG+G + +DEF+
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 126 bits (317), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DGCI+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKETD---AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLT 118
GT++F EFL +M + MK+ EEEL + F++FDK+ +GYI EL+ ++ GE +T
Sbjct: 70 GTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+D++E+++ + D + DG+++YDEF++ M +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 126 bits (317), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/76 (80%), Positives = 68/76 (89%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT+EQI EFKEAF LFDKDGDGCIT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKET 80
+F EFLNLMA+KMK+T
Sbjct: 64 DFPEFLNLMARKMKDT 79
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 125 bits (313), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKETD---AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLT 118
GT++F EFL +M + MK+ +EEEL + F++FDK+ +GYI EL+ ++ GE +T
Sbjct: 70 GTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+D++E+++ + D + DG+++YDEF++ M +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 103/151 (68%), Gaps = 4/151 (2%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKETD---AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLT 118
GT++F EFL +M + MK+ EEEL + F++FDK+ +GYI EL+ ++ GE +T
Sbjct: 70 GTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+D++E+++ + D + DG+++YDEF++ M +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKETD---AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLT 118
GT++F EFL +M + MK+ +EEEL + F+++DK+ +GYI EL+ ++ GE +T
Sbjct: 70 GTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETIT 129
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+D++E+++ + D + DG+++YDEF++ M +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKETD---AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLT 118
GT++F EFL +M + MK+ +EEEL + F++FDK+ +GYI EL+ ++ GE +T
Sbjct: 70 GTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETIT 129
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+D++E+++ + D + DG+++YDE+++ M +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEWLEFMKGV 160
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 122 bits (305), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 66/77 (85%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKETD 81
+F EFL +MA+KMK+TD
Sbjct: 64 DFPEFLTMMARKMKDTD 80
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 103/151 (68%), Gaps = 4/151 (2%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKETD---AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLT 118
GT++F EFL +M + MK+ +EEEL + F++ DK+ +GYI EL+ ++ GE +T
Sbjct: 70 GTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETIT 129
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+D++E+++ + D + DG+++YDEF++ M +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 103/151 (68%), Gaps = 4/151 (2%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKETD---AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLT 118
GT++F EFL +M + MK+ +EEEL + F++FDK+ +GYI EL+ ++ GE +T
Sbjct: 70 GTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETIT 129
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+D++E+++ + D + DG+++YDE ++ M +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEXLEFMKGV 160
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 67/71 (94%)
Query: 76 KMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDG 135
KMK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++MI EAD+DGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 136 QVNYDEFVKMM 146
QVNY+EFV+MM
Sbjct: 61 QVNYEEFVQMM 71
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
Query: 72 LMAKK 76
+M K
Sbjct: 70 MMTAK 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 65/76 (85%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMKET 80
+F EFL +MA+KMK+T
Sbjct: 64 DFPEFLTMMARKMKDT 79
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/70 (78%), Positives = 66/70 (94%)
Query: 77 MKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQ 136
MK+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++MI EAD+DGDGQ
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 137 VNYDEFVKMM 146
VNY+EFV+MM
Sbjct: 61 VNYEEFVQMM 70
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
Query: 72 LMAKK 76
+M K
Sbjct: 69 MMTAK 73
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 65/76 (85%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D +GTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 65 EFGEFLNLMAKKMKET 80
+F EFL +MA+KMK+T
Sbjct: 64 DFPEFLTMMARKMKDT 79
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DGDG +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 118 bits (295), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 63/74 (85%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMK 78
+F EFL +MA+KMK
Sbjct: 64 DFPEFLTMMARKMK 77
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 116 bits (290), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 62/73 (84%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKM 77
+F EFL +MA+KM
Sbjct: 64 DFPEFLTMMARKM 76
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 116 bits (290), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 64/68 (94%)
Query: 81 DAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYD 140
D+EEELKEAF+VFDKDQNG+ISA ELRHVM NLGEKLTD+EV++MI EAD+DGDGQ+NY+
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 141 EFVKMMMT 148
EFVK+MM
Sbjct: 61 EFVKVMMA 68
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF +FDKD +G I+ EL V+ +L + T+EE+ +MI E D D +G I + EF+
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 72 LMAKK 76
+M K
Sbjct: 65 VMMAK 69
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 116 bits (290), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 62/73 (84%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKM 77
+F EFL +MA+KM
Sbjct: 64 DFPEFLTMMARKM 76
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 63/67 (94%)
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++MI EAD+DGDGQVNY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 140 DEFVKMM 146
+EFV+MM
Sbjct: 61 EEFVQMM 67
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 72 LM 73
+M
Sbjct: 66 MM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 64/68 (94%)
Query: 79 ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVN 138
+TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++MI EAD+DGDGQVN
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 139 YDEFVKMM 146
Y+EFV+MM
Sbjct: 61 YEEFVQMM 68
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
Query: 72 LMAKK 76
+M K
Sbjct: 67 MMTAK 71
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 65/70 (92%)
Query: 77 MKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQ 136
MK+TD+EEE++EAF+V DKD NGYISA ELRHVM NLGEKLTD+EV++MI EAD+DGDGQ
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 137 VNYDEFVKMM 146
VNY+EFV+MM
Sbjct: 82 VNYEEFVQMM 91
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF + DKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
Query: 72 LMAKK 76
+M K
Sbjct: 90 MMTAK 94
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 63/67 (94%)
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
TD+EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++MI EAD+DGDGQVNY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 140 DEFVKMM 146
+EFV+MM
Sbjct: 61 EEFVQMM 67
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 72 LM 73
+M
Sbjct: 66 MM 67
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKK 76
+F EFL +MA+K
Sbjct: 64 DFPEFLTMMARK 75
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MM 146
MM
Sbjct: 71 MM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 61/72 (84%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF LFDKDGDG IT +EL TV+RSL QNPTE ELQDMINEVD+D NGTI
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 65 EFGEFLNLMAKK 76
+F EFL +MA+K
Sbjct: 65 DFPEFLTMMARK 76
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD +G I+ EL VM +LG+ T+ E++ MINE D DG+G +++ EF+
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 145 MM 146
MM
Sbjct: 72 MM 73
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 64/72 (88%)
Query: 77 MKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQ 136
MKE D+EEEL EAFKVFD+D NG ISA ELRHVM NLGEKLTDDEV++MI EAD+DGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 137 VNYDEFVKMMMT 148
+NY+EFV+MM++
Sbjct: 61 INYEEFVRMMVS 72
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E EAF +FD+DG+G I+ EL V+ +L + T++E+ +MI E D D +G I + EF+
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 68
Query: 72 LMAKK 76
+M K
Sbjct: 69 MMVSK 73
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 112 bits (279), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/67 (77%), Positives = 61/67 (91%)
Query: 48 ELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELR 107
ELQDMINEVD+D NGTI+F EFL +MA+KMK+TD+EEE++EAF+VFDKD NGYISA ELR
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 108 HVMINLG 114
HVM NLG
Sbjct: 62 HVMTNLG 68
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSL 40
E +EAF +FDKDG+G I+ EL V+ +L
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNL 67
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMM 146
E++ MINE D DG+G +++ EF+ MM
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMM 27
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 64/68 (94%)
Query: 79 ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVN 138
+TD+EEE++EAF+VFDKD NGYISA +LRHVM NLGEKLTD+EV++MI EAD+DGDGQVN
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 139 YDEFVKMM 146
Y++FV+MM
Sbjct: 62 YEDFVQMM 69
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ +L V+ +L + T+EE+ +MI E D D +G + + +F+
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
Query: 72 LMAKK 76
+M K
Sbjct: 68 MMTAK 72
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 61/74 (82%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQI EFKEAF L+DKDGDG IT +EL TV+RSL NPTE ELQDMINEVD+D NGTI
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTI 63
Query: 65 EFGEFLNLMAKKMK 78
+F EFL +MA+ MK
Sbjct: 64 DFPEFLTMMARIMK 77
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF ++DKD +G I+ EL VM +LG T+ E++ MINE D DG+G +++ EF+
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 145 MMMTI 149
MM I
Sbjct: 71 MMARI 75
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 5/148 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG-- 62
+ EQ EFKEAF LFD+ GDG I + V+R+L QNPT E+ ++ SD
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 63 TIEFGEFLNLMA--KKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
T++F +FL +M K K+ E+ E +VFDK+ NG + E+RHV++ LGEK+T++
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 120
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMT 148
EVEQ++ + D +G +NY+E V+M+++
Sbjct: 121 EVEQLVAGHE-DSNGCINYEELVRMVLS 147
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 5/148 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG-- 62
+ EQ EFKEAF LFD+ GDG I + V+R+L QNPT E+ ++ SD
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 63 TIEFGEFLNLMA--KKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
T++F +FL +M K K+ E+ E +VFDK+ NG + E+RHV++ LGEK+T++
Sbjct: 63 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 122
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMT 148
EVEQ++ + D +G +NY+E V+M+++
Sbjct: 123 EVEQLVAGHE-DSNGCINYEELVRMVLS 149
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 7 NEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEF 66
++Q+ EFKEAF LFD + G IT E L TV++ +M NE D+ NG I+F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 67 GEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMI 126
EFL++M ++MK+T +E+ L++AF+ FD + GYI L+ ++NLG++L E + +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 127 NEADLDGDGQVNYDEFVKMMMT 148
+ + GQ+ YD F+ M T
Sbjct: 122 GITETE-KGQIRYDNFINTMFT 142
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 60/64 (93%)
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEF 142
EEE++EAF+VFDKD NGYISA ELRHVM NLGEKLTD+EV++MI EAD+DGDGQVNY+EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 143 VKMM 146
V+MM
Sbjct: 61 VQMM 64
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF +FDKDG+G I+ EL V+ +L + T+EE+ +MI E D D +G + + EF+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 72 LMAKK 76
+M K
Sbjct: 63 MMTAK 67
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
+ +E F +FDKD DG +++EEL + +RSL +NPT EL + ++++ + F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDLATFKT 62
Query: 72 LMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEAD 130
+ K +K T+ +E+ +AF+ DK+ NG I ELR +++NLG+ LT EVE+++ E
Sbjct: 63 VYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 131 LDGDGQVNYDEFVKMMMT 148
+ GDG +NY+ FV M++T
Sbjct: 123 VSGDGAINYESFVDMLVT 140
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
T + ++++E F++FDKD +G +S EL + +LG+ T+ E+ + GQ+N
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNA 52
Query: 140 DEF 142
EF
Sbjct: 53 KEF 55
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFG 67
EQ E +AF DK+G+G I EL ++ +L T E+++++ EV +G I +
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 68 EFLNLM 73
F++++
Sbjct: 133 SFVDML 138
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 105 bits (263), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 93/141 (65%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQ E +EAF LFD DG G I V+EL R+L P +EE++ I+E+D + G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
FG+FL + +K E D +EE+ +AFK+FD D+ G IS L+ V LGE LTD+E+++
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 144
Query: 125 MINEADLDGDGQVNYDEFVKM 145
I+EAD DGDG+V+ EF+++
Sbjct: 145 XIDEADRDGDGEVSEQEFLRI 165
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
SE T E+I++ AF LFD D G I+ + L V + L +N T+EELQ+ I+E D D +
Sbjct: 98 SEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGD 154
Query: 62 GTIEFGEFLNLMAK 75
G + EFL + K
Sbjct: 155 GEVSEQEFLRIXKK 168
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 9 QIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGE 68
QI EFKEAF + D++ DG I E+L ++ S+ +NPT+E L+ M++E G I F
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP----GPINFTM 60
Query: 69 FLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINE 128
FL + +K+ TD E+ ++ AF FD++ +G+I LR ++ +G++ TD+EV++M E
Sbjct: 61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 129 ADLDGDGQVNYDEFVKMM 146
A +D G NY EF +++
Sbjct: 121 APIDKKGNFNYVEFTRIL 138
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 86/141 (60%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L EQ E EAF LFD + DG + EL +++L + E+ D+I+E DS+ +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
++ +F +M +K+ + D +E+K AF++FD D G IS LR V LGE LTD+E+
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 125 MINEADLDGDGQVNYDEFVKM 145
MI E DLDGDG++N +EF+ +
Sbjct: 137 MIEEFDLDGDGEINENEFIAI 157
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEF 142
++E+ EAF +FD + +G++ EL+ M LG +L E+ +I+E D +G + YD+F
Sbjct: 22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDF 81
Query: 143 VKMM 146
+M
Sbjct: 82 YIVM 85
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 103 bits (256), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 95/151 (62%), Gaps = 5/151 (3%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M L E+I E +EAF FDKD DG I +L +R++ PTE EL ++ +++ +
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAE----EELKEAFKVFDKDQNGYISATELRHVMIN-LGE 115
G ++F +F+ LM K+ A+ +EL++AF+ FD + +G IS +ELR M LG
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGH 120
Query: 116 KLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
++ ++E++I + DL+GDG+V+++EFV+MM
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMINEVDSDRNGTIEFGE 68
+ E ++AF FD +GDG I+ EL +R L +++++I +VD + +G ++F E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 69 FLNLMAK 75
F+ +M++
Sbjct: 147 FVRMMSR 153
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 95/151 (62%), Gaps = 5/151 (3%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M L E+I E +EAF FDKD DG I +L +R++ PTE EL ++ +++ +
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 61 NGTIEFGEFLNLMAKKMKETDAE----EELKEAFKVFDKDQNGYISATELRHVMIN-LGE 115
G ++F +F+ LM K+ A+ +EL++AF+ FD + +G IS +ELR M LG
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 116 KLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
++ ++E++I + DL+GDG+V+++EFV+MM
Sbjct: 121 QVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMINEVDSDRNGTIEFGE 68
+ E ++AF FD +GDG I+ EL +R+L +++++I +VD + +G ++F E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 69 FLNLMAK 75
F+ +M++
Sbjct: 147 FVRMMSR 153
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 41/107 (38%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINLGEKLT---------------------DDEV 122
EEL+EAF+ FDKD++GYI+ +L + M +G T DD V
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 123 EQM--------------------INEADLDGDGQVNYDEFVKMMMTI 149
E M E D +GDG+++ E + M +
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL 117
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L E+I E +EAF FDKD DG I +L +R++ PTE EL ++ +++ + G +
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 65 EFGEFLNLMAKKMKETDAE----EELKEAFKVFDKDQNGYISATELRHVMIN-LGEKLTD 119
+F +F+ LM K+ A+ +EL++AF+ FD + +G IS +ELR M LG ++
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 138
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMM 146
++E++I + DL+GDG+V+++EFV+MM
Sbjct: 139 RDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMINEVDSDRNGTIEFGE 68
+ E ++AF FD +GDG I+ EL +R L +++++I +VD + +G ++F E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 69 FLNLMAK 75
F+ +M++
Sbjct: 161 FVRMMSR 167
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 91/149 (61%), Gaps = 5/149 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSD--RNG 62
+Q+ EFKEAF LFD+ GDG I + V+R+L QNPT E+ ++ SD ++
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 63 TIEFGEFLNLM--AKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
++F FL ++ K + E+ E F+VFDK+ NG + ELRHV+ LGEK+T++
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE 123
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMTI 149
EVE ++ + D +G +NY+ F+K ++++
Sbjct: 124 EVETVLAGHE-DSNGCINYEAFLKHILSV 151
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMI-NEVDSDRNGT-IE 65
++I +FKEAF LFD+ GD IT+ ++ ++R+L QNPT E+ ++ N + N I
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 66 FGEFLNLM--AKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVE 123
F EFL ++ A K+ E+ E +VFDK+ NG + ELRHV+ LGEK+T++EVE
Sbjct: 61 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVE 120
Query: 124 QMINEADLDGDGQVNYDEFVKMMMTI 149
+++ + D +G +NY+ FVK +M++
Sbjct: 121 ELMKGQE-DSNGCINYEAFVKHIMSV 145
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 82/141 (58%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L EQ E EAF LFD + DG + EL ++L + E+ D+I+E DS+
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
++ +F + +K+ + D +E+K AF++FD D G IS LR V LGE LTD+E+
Sbjct: 77 KYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 125 MINEADLDGDGQVNYDEFVKM 145
I E DLDGDG++N +EF+ +
Sbjct: 137 XIEEFDLDGDGEINENEFIAI 157
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSD--RNGTIEFGEF 69
+FKEAF LFD+ GD IT ++ + R+L QNPT E+ ++ + I F EF
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 66
Query: 70 LNLM--AKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
L ++ A K+ E+ E +VFDK+ NG + ELRHV+ LGEK+T++EVE+++
Sbjct: 67 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 126
Query: 128 EADLDGDGQVNYDEFVKMMMTI 149
+ D +G +NY+ FVK +M++
Sbjct: 127 GQE-DSNGCINYEAFVKHIMSV 147
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLD--GDGQVNY 139
A ++ KEAF +FD+ + I+A+++ + LG+ T+ E+ +++ + + +
Sbjct: 4 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 63
Query: 140 DEFVKMM 146
+EF+ M+
Sbjct: 64 EEFLPML 70
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 5/142 (3%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSD--RNGTIEFGEF 69
+FKEAF LFD+ GD IT ++ + R+L QNPT E+ ++ + I F EF
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 68
Query: 70 LNLM--AKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
L ++ A K+ E+ E +VFDK+ NG + ELRHV+ LGEK+T++EVE+++
Sbjct: 69 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK 128
Query: 128 EADLDGDGQVNYDEFVKMMMTI 149
+ D +G +NY+ FVK +M++
Sbjct: 129 GQE-DSNGCINYEAFVKHIMSV 149
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLD--GDGQVNY 139
A ++ KEAF +FD+ + I+A+++ + LG+ T+ E+ +++ + + +
Sbjct: 6 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 65
Query: 140 DEFVKMM 146
+EF+ M+
Sbjct: 66 EEFLPML 72
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
+E L+ E+I KE F + D D G IT +EL ++ + E E++D+++ D D++
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDE 121
GTI++GEF+ + + + EE L AF FDKD +GYI+ E++ + G L D
Sbjct: 61 GTIDYGEFIAATV-HLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIH 117
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
++ MI E D D DGQ++Y EF MM
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAAMM 142
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAK 75
AF FDKDG G IT++E+ + D + + DMI E+D D +G I++GEF +M K
Sbjct: 87 AFSYFDKDGSGYITLDEIQQACK--DFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144
Query: 76 K 76
+
Sbjct: 145 R 145
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
S LT EQI EFKEAF LFDKD +G I+ ELATV+RSL +P+E E+ D++NE+D D N
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 62 GTIEFGEFLNLMAKKMK 78
IEF EFL LM++++K
Sbjct: 61 HQIEFSEFLALMSRQLK 77
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E KEAF +FDKD NG IS++EL VM +LG ++ EV ++NE D+DG+ Q+ + EF+
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 145 MM 146
+M
Sbjct: 71 LM 72
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 83/136 (61%), Gaps = 6/136 (4%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGT-IEFGEFLNL 72
K+ F LFDK G G I + L +R++ NPT + +QD+IN S R+ + + + L
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 73 MAKKMKETDAEEELK-----EAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
+ KE DA + K +AF+VFDK+ G +S +LR+++ LGEKLTD EV++++
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 128 EADLDGDGQVNYDEFV 143
++D +G+++Y +F+
Sbjct: 127 GVEVDSNGEIDYKKFI 142
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 40/65 (61%)
Query: 6 TNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIE 65
T + +F +AF +FDK+ G ++V +L ++ L + T+ E+ +++ V+ D NG I+
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEID 137
Query: 66 FGEFL 70
+ +F+
Sbjct: 138 YKKFI 142
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 7/139 (5%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
+K+AF LFD+ G G I + ++R+ QNPT E I E++S ++ +FL
Sbjct: 6 PYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQ 61
Query: 72 LMAKK--MKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEA 129
++ + EE + F+VFDKD G I ELR+V+ +LGEKL+++E+++++
Sbjct: 62 VLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 121
Query: 130 DLDGDGQVNYDEFVKMMMT 148
+ DG VNY +FV+M++
Sbjct: 122 PVK-DGMVNYHDFVQMILA 139
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 10/151 (6%)
Query: 5 LTNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
L+ ++I + KE F LFD DG DG + ++ V R L NP E D+ + + G
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNE---DVFAVGGTHKMG 59
Query: 63 --TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD 119
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 119
Query: 120 DEVEQMINEADL--DGDGQVNYDEFVKMMMT 148
+EV+++IN DL D +G V Y+EFVK +MT
Sbjct: 120 EEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 150
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 85.9 bits (211), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 10/151 (6%)
Query: 5 LTNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
L+ ++I + KE F LFD DG DG + ++ V R L NP E D+ + + G
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNE---DVFAVGGTHKMG 60
Query: 63 --TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD 119
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D
Sbjct: 61 EKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 120
Query: 120 DEVEQMINEADL--DGDGQVNYDEFVKMMMT 148
+EV+++IN DL D +G V Y+EFVK +MT
Sbjct: 121 EEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 151
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 61/81 (75%)
Query: 66 FGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQM 125
FG+FL +M +KM E D +EE+ +AFK+FD D+ G IS L+ V LGE LTD+E+++M
Sbjct: 3 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 62
Query: 126 INEADLDGDGQVNYDEFVKMM 146
I+EAD DGDG+V+ EF+++M
Sbjct: 63 IDEADRDGDGEVSEQEFLRIM 83
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
MSE T E+I++ AF LFD D G I+ + L V + L +N T+EELQ+MI+E D D
Sbjct: 14 MSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 70
Query: 61 NGTIEFGEFLNLMAK 75
+G + EFL +M K
Sbjct: 71 DGEVSEQEFLRIMKK 85
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 33 LATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKV 92
L + + + + T+EE+ D D G I F L +AK++ E +EEL+E
Sbjct: 7 LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKN-LKRVAKELGENLTDEELQEMIDE 65
Query: 93 FDKDQNGYISATELRHVM 110
D+D +G +S E +M
Sbjct: 66 ADRDGDGEVSEQEFLRIM 83
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ Q+ E KEAF + D+D DG I +E+L + SL + P ++EL M+ E G +
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECP----GQL 65
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F FL L +K+ TD E+ L+ AF +FD+D G+I L+ ++ N+G+ + +E++
Sbjct: 66 NFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKN 125
Query: 125 MINEADLDGDGQVNYDEFV 143
+ +A L + Q NY++ V
Sbjct: 126 VWKDAPLK-NKQFNYNKMV 143
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ +EL TV+R L QNPT+EEL +I EVD D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 EFGEFLNLMAKKMKE 79
+F EFL +M ++MKE
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 145 MMM 147
MM+
Sbjct: 81 MMV 83
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 4 VLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGT 63
+ T Q+ EFKEAF L D+D DG I+ ++ SL + TE+EL M+ E G
Sbjct: 50 MFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGP 105
Query: 64 IEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVE 123
I F FL + ++ TD E+ + AF +FD + +G L+ + GEK + DEV+
Sbjct: 106 INFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVD 164
Query: 124 QMINEADLDGDGQVNYDEFVKMM 146
Q ++EA +DG+G ++ +F +++
Sbjct: 165 QALSEAPIDGNGLIDIKKFAQIL 187
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAK 75
AF LFD +GDG E L + + + +++E+ ++E D NG I+ +F ++ K
Sbjct: 131 AFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK 189
Query: 76 KMKETDA 82
KE A
Sbjct: 190 GAKEEGA 196
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ + L TV+R L QNPT+EEL +I EVD D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 65 EFGEFLNLMAKKMKE 79
+F EFL +M ++MKE
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS L VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 145 MMM 147
MM+
Sbjct: 81 MMV 83
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
++E L+ E+I KE F D D G IT EEL ++ + N E E+ D+ D D
Sbjct: 17 IAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDN 76
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
+GTI++ EF+ + + + E+ L AF FDKD +GYI+ EL+ G + D
Sbjct: 77 SGTIDYKEFIAATL-HLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDV 133
Query: 121 EVEQMINEADLDGDGQVNYDEFV 143
+E++ + D D DG+++Y+EFV
Sbjct: 134 RIEELXRDVDQDNDGRIDYNEFV 156
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ +EL TV+R L QNPT+EEL +I EVD D +GTI
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 65 EFGEFLNLMAKKMK 78
+F EFL +M ++MK
Sbjct: 63 DFEEFLVMMVRQMK 76
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T +E++ +I E D DG G ++++EF+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 145 MMM 147
MM+
Sbjct: 70 MMV 72
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 10/151 (6%)
Query: 5 LTNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
L+ ++I + K+ F LFD DG DG + +L V R L NP E D+ + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNE---DVFAVGGTHKMG 59
Query: 63 --TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD 119
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSD 119
Query: 120 DEVEQMINEADL--DGDGQVNYDEFVKMMMT 148
+EV+++IN DL D +G V Y+EFVK +M
Sbjct: 120 EEVDEIINLTDLQEDLEGNVKYEEFVKKVMA 150
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT+EQ EFK AF +F +D DGCI+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F EFL +M + MK+
Sbjct: 70 GTVDFDEFLVMMVRCMKD 87
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFDKD-QNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F +D ++G IS EL VM LG+ T +E+++MI+E D DG G V++DEF+
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 89/147 (60%), Gaps = 5/147 (3%)
Query: 5 LTNEQIVEFKEAFCLFD-KDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGT 63
L++ Q+ + AF F+ +G G ++ +++ ++ L T+ ++ +I+E D NG
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 64 IEFGEFLNLMAKKMKET----DAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD 119
I+F F + A+ + E ++EL+EAF+++DK+ NGYIS +R ++ L E L+
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSS 126
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMM 146
++++ MI+E D DG G V+++EF+ +M
Sbjct: 127 EDLDAMIDEIDADGSGTVDFEEFMGVM 153
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF L+DK+G+G I+ + + ++ LD+ + E+L MI+E+D+D +GT++F EF+
Sbjct: 92 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 151
Query: 72 LMA 74
+M
Sbjct: 152 VMT 154
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F +D DGCI+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F EFL +M + MK+
Sbjct: 70 GTVDFDEFLVMMVRCMKD 87
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFDKD-QNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F +D ++G IS EL VM LG+ T +E+++MI+E D DG G V++DEF+
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ E I EFK AF +FD DG G I+ +EL TV+R L QNPT+ EL +I EVD D +GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 65 EFGEFLNLMAKKMKE 79
+F EFL +M ++MKE
Sbjct: 74 DFEEFLVMMVRQMKE 88
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
E K AF +FD D G IS EL VM LG+ T E++ +I E D DG G ++++EF+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLV 80
Query: 145 MMM 147
MM+
Sbjct: 81 MMV 83
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F + DGCI+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F EFL +M + MK+
Sbjct: 70 GTVDFDEFLVMMVRCMKD 87
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFDKD-QNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F + ++G IS EL VM LG+ T +E+++MI+E D DG G V++DEF+
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DGCI+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F E+L +MA+ MK+
Sbjct: 70 GTVDFDEWLVMMARCMKD 87
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 85 ELKEAFKVFD-KDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F ++G IS EL VM LG+ T +E+++MI+E D DG G V++DE++
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 144 KMM 146
MM
Sbjct: 79 VMM 81
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L +QI E KEAF + D++ DG I + +L + SL + P ++EL M+ E G +
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GPL 68
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F FL++ + K+ TD+EE ++ AF +FD+ ++ ++ ++ N+G+ DE+
Sbjct: 69 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRM 128
Query: 125 MINEADLDGDGQVNYDEFVKMMMTIG 150
EA ++G G+ +Y FV M+ G
Sbjct: 129 TFKEAPVEG-GKFDYVRFVAMIKGSG 153
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 5 LTNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
L+ ++I + K+ F LFD DG DG + +L V R L NP E D+ + + G
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNE---DVFAVGGTHKMG 57
Query: 63 --TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD 119
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D
Sbjct: 58 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 117
Query: 120 DEVEQMINEADL--DGDGQVNYDEFVKMMMT 148
++V+++I DL D +G V Y++FVK +M
Sbjct: 118 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 91/151 (60%), Gaps = 9/151 (5%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M ++I + F D D G ++VEE + + L QNP +Q +I+ D+D
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDG 66
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM-INLGEKLTD 119
NG ++F EF+ +++ + D E++L+ AF+++D D++GYIS EL V+ + +G L D
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 126
Query: 120 DEVEQMINE----ADLDGDGQVNYDEFVKMM 146
+++Q++++ AD DGDG+++++EF ++
Sbjct: 127 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 21 DKDGDGCITVEELATVIRSLD 41
DKDGDG I+ EE V+ LD
Sbjct: 141 DKDGDGRISFEEFCAVVGGLD 161
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 91/151 (60%), Gaps = 9/151 (5%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M ++I + F D D G ++VEE + + L QNP +Q +I+ D+D
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDG 65
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM-INLGEKLTD 119
NG ++F EF+ +++ + D E++L+ AF+++D D++GYIS EL V+ + +G L D
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 125
Query: 120 DEVEQMINE----ADLDGDGQVNYDEFVKMM 146
+++Q++++ AD DGDG+++++EF ++
Sbjct: 126 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 21 DKDGDGCITVEELATVIRSLD 41
DKDGDG I+ EE V+ LD
Sbjct: 140 DKDGDGRISFEEFCAVVGGLD 160
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 90/144 (62%), Gaps = 9/144 (6%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFG 67
++I + F D D G ++VEE + + L QNP +Q +I+ D+D NG ++F
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFK 58
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM-INLGEKLTDDEVEQMI 126
EF+ +++ + D E++L+ AF+++D D++GYIS EL V+ + +G L D +++Q++
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 127 NE----ADLDGDGQVNYDEFVKMM 146
++ AD DGDG+++++EF ++
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVV 142
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 79 ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVN 138
+ D + L + FK D D +G +S E ++L E + V+++I+ D DG+G+V+
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVD 56
Query: 139 YDEFV 143
+ EF+
Sbjct: 57 FKEFI 61
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 21 DKDGDGCITVEELATVIRSLD 41
DKDGDG I+ EE V+ LD
Sbjct: 126 DKDGDGRISFEEFCAVVGGLD 146
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 88/140 (62%), Gaps = 9/140 (6%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFG 67
++I + F D D G ++VEE + + L QNP +Q +I+ D+D NG ++F
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFK 59
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM-INLGEKLTDDEVEQMI 126
EF+ +++ + D E++L+ AF+++D D++GYIS EL V+ + +G L D +++Q++
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 119
Query: 127 NE----ADLDGDGQVNYDEF 142
++ AD DGDG+++++EF
Sbjct: 120 DKTIINADKDGDGRISFEEF 139
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 79 ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVN 138
+ D + L + FK D D +G +S E ++L E + V+++I+ D DG+G+V+
Sbjct: 2 DADEIKRLGKRFKKLDLDNSGSLSVEEF----MSLPELQQNPLVQRVIDIFDTDGNGEVD 57
Query: 139 YDEFV 143
+ EF+
Sbjct: 58 FKEFI 62
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 21 DKDGDGCITVEELATVIRSLD 41
DKDGDG I+ EE V+ LD
Sbjct: 127 DKDGDGRISFEEFCAVVGGLD 147
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 5 LTNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
L+ ++I + K+ F LFD DG DG + +L V R L NP E D+ + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNE---DVFAVGGTHKMG 59
Query: 63 --TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD 119
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 120 DEVEQMINEADL--DGDGQVNYDEFVKMMMT 148
++V+++I DL D +G V Y++FVK +M
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 5 LTNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
L+ ++I + K+ F LFD DG DG + +L V R L NP E D+ + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNE---DVFAVGGTHKMG 59
Query: 63 --TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD 119
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 120 DEVEQMINEADL--DGDGQVNYDEFVKMMMT 148
++V+++I DL D +G V Y++FVK +M
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DGCI+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F EFL +M + MK+
Sbjct: 70 GTVDFDEFLVMMVRCMKD 87
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFD-KDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F ++G IS EL VM LG+ T +E+++MI+E D DG G V++DEF+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L +QI E KEAF + D D DG ++ E++ + L + P ++EL M+ E G +
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPL 67
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F FL++ + K+ TD+EE ++ AF +FD+ + ++ ++ ++ N+G+ DE+
Sbjct: 68 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 127
Query: 125 MINEADLDGDGQVNYDEFVKMMMTIG 150
EA ++G G+ +Y +F M+ G
Sbjct: 128 TFKEAPVEG-GKFDYVKFTAMIKGSG 152
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L +QI E KEAF + D D DG ++ E++ + L + P ++EL M+ E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPL 56
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F FL++ + K+ TD+EE ++ AF +FD+ + ++ ++ ++ N+G+ DE+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 125 MINEADLDGDGQVNYDEFVKMMMTIG 150
EA ++G G+ +Y +F M+ G
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMIKGSG 141
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L +QI E KEAF + D D DG ++ E++ + L + P ++EL M+ E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPL 56
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F FL++ + K+ TD+EE ++ AF +FD+ + ++ ++ ++ N+G+ DE+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
EA ++G G+ +Y +F M+
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMI 137
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DGCI+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F E+L +M + MK+
Sbjct: 70 GTVDFDEWLVMMVRCMKD 87
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFD-KDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F ++G IS EL VM LG+ T +E+++MI+E D DG G V++DE++
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWL 78
Query: 144 KMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
Query: 6 TNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG- 62
+ ++I + K+ F LFD DG DG + +L V R L NP E D+ + + G
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNE---DVFAVGGTHKMGE 57
Query: 63 -TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D+
Sbjct: 58 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 117
Query: 121 EVEQMINEADL--DGDGQVNYDEFVKMMMT 148
+V+++I DL D +G V Y++FVK +M
Sbjct: 118 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
Query: 6 TNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG- 62
+ ++I + K+ F LFD DG DG + +L V R L NP E D+ + + G
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNE---DVFAVGGTHKMGE 57
Query: 63 -TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D+
Sbjct: 58 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDE 117
Query: 121 EVEQMINEADL--DGDGQVNYDEFVKMMMT 148
+V+++I DL D +G V Y++FVK +M
Sbjct: 118 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F EFL +M + MK+
Sbjct: 70 GTVDFDEFLVMMVRSMKD 87
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFD-KDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F ++G IS EL VM LG+ T +E+++MI+E D DG G V++DEF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F EFL +M + MK+
Sbjct: 70 GTVDFDEFLVMMVRSMKD 87
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFD-KDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F ++G IS EL VM LG+ T +E+++MI+E D DG G V++DEF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DG I+ +EL V+R L QNPT EELQ+MI+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 62 GTIEFGEFLNLMAKKMKE 79
GT++F EFL +M + MK+
Sbjct: 70 GTVDFDEFLVMMVRSMKD 87
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 85 ELKEAFKVFD-KDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F ++G IS EL VM LG+ T +E+++MI+E D DG G V++DEF+
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 144 KMMM 147
MM+
Sbjct: 79 VMMV 82
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 6 TNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIE 65
+QI E KEAF + D D DG ++ E++ + L + P ++EL M+ E G +
Sbjct: 1 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPLN 56
Query: 66 FGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQM 125
F FL++ + K+ TD+EE ++ AF +FD+ + ++ ++ ++ N+G+ DE+
Sbjct: 57 FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 116
Query: 126 INEADLDGDGQVNYDEFVKMM 146
EA ++G G+ +Y +F M+
Sbjct: 117 FKEAPVEG-GKFDYVKFTAMI 136
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFG 67
+QI E KEAF + D D DG ++ E++ + L + P ++EL M+ E G + F
Sbjct: 1 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPLNFT 56
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
FL++ + K+ TD+EE ++ AF +FD+ + ++ ++ ++ N+G+ DE+
Sbjct: 57 MFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFK 116
Query: 128 EADLDGDGQVNYDEFVKMM 146
EA ++G G+ +Y +F M+
Sbjct: 117 EAPVEG-GKFDYVKFTAMI 134
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 84/151 (55%), Gaps = 10/151 (6%)
Query: 5 LTNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
L+ ++I + K+ F LF DG DG + +L V R L NP E D+ + + G
Sbjct: 3 LSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNE---DVFAVGGTHKMG 59
Query: 63 --TIEFGEFLNLMAKKMK-ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD 119
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+D
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD 119
Query: 120 DEVEQMINEADL--DGDGQVNYDEFVKMMMT 148
++V+++I DL D +G V Y++FVK +M
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF + D++ DG I + +L SL + P ++EL M+ E G + F FL+
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAP----GPLNFTMFLS 58
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADL 131
+ + K+ TD+EE ++ AF +FD+D ++ ++ ++ N+G+ DE+ EA +
Sbjct: 59 IFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 118
Query: 132 DGDGQVNYDEFVKMM 146
+G G+ +Y FV M+
Sbjct: 119 EG-GKFDYVRFVAMI 132
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
+E+KEAF + D++++G+I +L+ +LG D E+ M+ EA G +N+ F+
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA----PGPLNFTMFL 57
Query: 144 KM 145
+
Sbjct: 58 SI 59
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQ E +EAF LFD DG G I +EL +R+L P +EE++ MI+E+D D +GTI
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 65 EFGEFLNLMAKKM 77
+F EFL +M KM
Sbjct: 84 DFEEFLTMMTAKM 96
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEF 142
++E++EAF +FD D +G I A EL+ M LG + +E+++MI+E D DG G ++++EF
Sbjct: 29 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 88
Query: 143 VKMM 146
+ MM
Sbjct: 89 LTMM 92
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 54/73 (73%)
Query: 74 AKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDG 133
+KM E D +EE+ +AFK+FD D+ G IS L+ V LGE LTD+E+++MI+EAD DG
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 134 DGQVNYDEFVKMM 146
DG+V+ EF+++M
Sbjct: 61 DGEVSEQEFLRIM 73
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
MSE T E+I++ AF LFD D G I+ + L V + L +N T+EELQ+MI+E D D
Sbjct: 4 MSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 61 NGTIEFGEFLNLMAK 75
+G + EFL +M K
Sbjct: 61 DGEVSEQEFLRIMKK 75
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 38 RSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQ 97
+ + + T+EE+ D D G I F L +AK++ E +EEL+E D+D
Sbjct: 2 QKMSEKDTKEEILKAFKLFDDDETGKISFKN-LKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 98 NGYISATELRHVM 110
+G +S E +M
Sbjct: 61 DGEVSEQEFLRIM 73
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L + + E KEAF + D++ DG I + +L + SL + P ++EL M+ E G +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GPL 72
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F FL++ + K+ TD+EE ++ AF +FD+ ++ ++ ++ N+G+ DE+
Sbjct: 73 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRM 132
Query: 125 MINEADLDGDGQVNYDEFVKMMMTIG 150
EA ++G G+ +Y FV M+ G
Sbjct: 133 TFKEAPVEG-GKFDYVRFVAMIKGSG 157
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L + + E KEAF + D++ DG I + +L + SL + P ++EL M+ E G +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAP----GPL 72
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F FL++ + K+ TD+EE ++ AF +FD+ ++ ++ ++ N+G+ DE+
Sbjct: 73 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRM 132
Query: 125 MINEADLDGDGQVNYDEFVKMMMTIG 150
EA ++G G+ +Y FV M+ G
Sbjct: 133 TFKEAPVEG-GKFDYVRFVAMIKGSG 157
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 91/158 (57%), Gaps = 15/158 (9%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEEL---ATVIRSLDQ-----NPTEEELQDMI 53
S++ T E+ E + F DK+GDG + +EL V+R+ EEE+ +++
Sbjct: 346 SKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNIL 405
Query: 54 NEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHV--MI 111
EVD D+NG IE+ EF+++ K + +EE L+ AF +FD D++G I+ EL ++ +
Sbjct: 406 KEVDFDKNGYIEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT 464
Query: 112 NLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
++ EK +D ++ EAD + D +++DEFV MM I
Sbjct: 465 SISEKTWND----VLGEADQNKDNMIDFDEFVSMMHKI 498
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
LT EQ E +EAF LFD DG G I V+EL +R+L P +EE++ MI+E+D + G +
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 65 EFGEFLNLMAKKM 77
FG+FL +M +KM
Sbjct: 85 NFGDFLTVMTQKM 97
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 43/64 (67%)
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEF 142
++E++EAF +FD D G I EL+ M LG + +E+++MI+E D +G G++N+ +F
Sbjct: 30 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDF 89
Query: 143 VKMM 146
+ +M
Sbjct: 90 LTVM 93
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 47/63 (74%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E+L+ AF+ FD+D +G+I+ ELR M LG+ L +E++ MI EAD+D DG+VNY+EF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 144 KMM 146
+M+
Sbjct: 66 RML 68
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAK 75
AF FD+DGDG ITV+EL + L Q +EEL MI E D D++G + + EF ++A+
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70
Query: 76 K 76
+
Sbjct: 71 E 71
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSL-----------DQNPTEEELQ 50
S++ + ++ E F DK+GDG + EL + L D + E E+
Sbjct: 349 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 408
Query: 51 DMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM 110
+++ VD D+NG IE+ EF+ + A K + E L+ AF++FD D +G IS+TEL +
Sbjct: 409 QVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI- 466
Query: 111 INLGEKLTDDEV-EQMINEADLDGDGQVNYDEFVKMMMTI 149
G D E + +++E D + DG+V++DEF +M++ +
Sbjct: 467 --FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 504
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSL-----------DQNPTEEELQ 50
S++ + ++ E F DK+GDG + EL + L D + E E+
Sbjct: 326 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 385
Query: 51 DMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM 110
+++ VD D+NG IE+ EF+ + A K + E L+ AF++FD D +G IS+TEL +
Sbjct: 386 QVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI- 443
Query: 111 INLGEKLTDDEV-EQMINEADLDGDGQVNYDEFVKMMMTI 149
G D E + +++E D + DG+V++DEF +M++ +
Sbjct: 444 --FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEF 142
E ELKEAF+V DK++ G I LR ++ +LG++LT+DE+E MI E D DG G V+Y+EF
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 143 VKMMMT 148
+MM+
Sbjct: 66 KCLMMS 71
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E KEAF + DK+ G I V+ L +++SL TE+E+++MI E D+D +GT+++ EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 72 LM 73
LM
Sbjct: 68 LM 69
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSL-----------DQNPTEEELQ 50
S++ + ++ E F DK+GDG + EL + L D + E E+
Sbjct: 350 SKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVD 409
Query: 51 DMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM 110
+++ VD D+NG IE+ EF+ + A K + E L+ AF++FD D +G IS+TEL +
Sbjct: 410 QVLDAVDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI- 467
Query: 111 INLGEKLTDDEV-EQMINEADLDGDGQVNYDEFVKMMMTI 149
G D E + +++E D + DG+V++DEF +M++ +
Sbjct: 468 --FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 505
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSL-----------DQNPTEEELQ 50
S++ + ++ E F DK+GDG + EL + L D + E E+
Sbjct: 326 SKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVD 385
Query: 51 DMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM 110
+++ VD D+NG IE+ EF+ + A K + E L+ AF+ FD D +G IS+TEL +
Sbjct: 386 QVLDAVDFDKNGYIEYSEFVTV-AXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI- 443
Query: 111 INLGEKLTDDEV-EQMINEADLDGDGQVNYDEFVKMMMTI 149
G D E + +++E D + DG+V++DEF + ++ +
Sbjct: 444 --FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLLKL 481
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEEL-----------ATVIRSLDQNPTEEELQ 50
S++ T E+ E + F D +GDG + +EL + LD + E E+
Sbjct: 31 SKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVD 90
Query: 51 DMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM 110
++ VD DRNG IE+ EF+ + K + + E L AF+ FD D +G I+ EL +
Sbjct: 91 HILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGRL- 148
Query: 111 INLGEKLTDDEV-EQMINEADLDGDGQVNYDEFVKMMMTI 149
G DDE Q++ E D + DG+V+++EFV+MM I
Sbjct: 149 --FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 68.9 bits (167), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
+VLT E+ E+KEAF LFDKD D +T EEL TV+R+L NPT++++ +++ + D D +G
Sbjct: 6 KVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSG 65
Query: 63 TIEFGEFLNLMAKKMKETDA 82
+ FL +M + +E D+
Sbjct: 66 KFDQETFLTIMLEYGQEVDS 85
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 75 KKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGD 134
KK+ + ++E KEAF++FDKD + ++A EL VM LG T ++ +++ + D D
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 135 GQVNYDEFVKMMMTIG 150
G+ + + F+ +M+ G
Sbjct: 65 GKFDQETFLTIMLEYG 80
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRN 61
E LT EQ EFK AF +F DGCI+ +EL V R L QNPT EELQ+ I+EVD D +
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGS 69
Query: 62 GTIEFGEFL 70
GT++F EFL
Sbjct: 70 GTVDFDEFL 78
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 85 ELKEAFKVFD-KDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E K AF +F ++G IS EL V LG+ T +E+++ I+E D DG G V++DEF+
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFL 78
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSL-----------DQNPTEEELQ 50
S++ T E+ E + F D +GDG + +EL R L D + E E+
Sbjct: 305 SKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVD 364
Query: 51 DMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVM 110
++ VD DRNG IE+ EF+ + K + + E L AF+ FD D +G I+ EL +
Sbjct: 365 HILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGRL- 422
Query: 111 INLGEKLTDDEV-EQMINEADLDGDGQVNYDEFVKMMMTI 149
G DDE Q++ E D + DG+V+++EFV+MM I
Sbjct: 423 --FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 460
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 9 QIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQ-NPTEEELQDMINEVDSDRNGTIEFG 67
+I +FKEAF + D++ DG I ++L ++ + N EEL MI E +G I F
Sbjct: 23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFT 78
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
FL + +K+K D E+ + AFKV D D G I + L ++ G + T +E++ M
Sbjct: 79 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 138
Query: 128 EADLDGDGQVNY 139
D G V+Y
Sbjct: 139 AFPPDVAGNVDY 150
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 84/144 (58%), Gaps = 12/144 (8%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMINEVDSDRNGTIEFGE 68
+ + K AF D++G G IT +L + RS P +L +++++DSD +G I++ E
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSDGSGNIDYTE 111
Query: 69 FLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD------DEV 122
FL A + +++ + AF+VFD D +G I+ EL HV+ N G K + ++V
Sbjct: 112 FL--AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFN-GNKRGNITERDVNQV 168
Query: 123 EQMINEADLDGDGQVNYDEFVKMM 146
++MI E D +GDG++++ EF +MM
Sbjct: 169 KKMIREVDKNGDGKIDFYEFSEMM 192
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 9 QIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQ-NPTEEELQDMINEVDSDRNGTIEFG 67
+I +FKEAF + D++ DG I ++L ++ + N EEL MI E +G I F
Sbjct: 5 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFT 60
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
FL + +K+K D E+ + AFKV D D G I + L ++ G + T +E++ M
Sbjct: 61 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 120
Query: 128 EADLDGDGQVNY 139
D G V+Y
Sbjct: 121 AFPPDVAGNVDY 132
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 5 LTNEQIVEFKEAFCLFD-KDG-DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG 62
LT ++I E +E F LFD DG DG + ++ ++R L NPTE ++ G
Sbjct: 3 LTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQ--------HGG 54
Query: 63 TIEFGEF------LNLMAKKMKETD---AEEELKEAFKVFDKDQNGYISATELRHVMINL 113
T + GE + + ++M D A +E EAFK FD++ G IS+ E+R+V+ L
Sbjct: 55 TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKML 114
Query: 114 GEKLTDDEVEQMINEADL--DGDGQVNYDEFVKMMMT 148
GE++T+D+ + D+ D DG + Y++ +K +M
Sbjct: 115 GERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMIN--EVDS 58
MS T EF EAF FD++G G I+ E+ V++ L + TE++ D+ ++
Sbjct: 75 MSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIRE 134
Query: 59 DRNGTIEF 66
D +G I++
Sbjct: 135 DIDGNIKY 142
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 81 DAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYD 140
D EE++EAFKVFD+D NG+IS EL M +LG + E+E +I D+DGDGQV+++
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 141 EFVKMM 146
EFV ++
Sbjct: 93 EFVTLL 98
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
+ +++ E +EAF +FD+DG+G I+ +EL T +RSL P E EL+ +I +D D +G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 65 EFGEFLNLMAK 75
+F EF+ L+
Sbjct: 90 DFEEFVTLLGP 100
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 9 QIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQ-NPTEEELQDMINEVDSDRNGTIEFG 67
QI +FKEAF + D++ DG I ++L ++ + N EEL MI E +G I F
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFT 65
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
FL + +K+K D E+ + AFKV D D G I + L ++ ++ T +E++ M
Sbjct: 66 VFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWA 125
Query: 128 EADLDGDGQVNY 139
D G V+Y
Sbjct: 126 AFPPDVAGNVDY 137
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSL--------DQNPTEEELQDMI 53
S++ + E+ E + F DK+GDG + +EL L D E E+ ++
Sbjct: 54 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 113
Query: 54 NEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL 113
D DRNG I++ EF+ + A K ++++L+ AF+ FD+D NG IS EL V
Sbjct: 114 GAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV---F 169
Query: 114 G-EKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
G + L ++MI+ D + DG V+++EF KM+ +
Sbjct: 170 GLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 206
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 73 MAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL-GEKLT-------DDEVEQ 124
MA K+ + +EL + F+ DK+ +G + EL L GE++ + EV+
Sbjct: 52 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 111
Query: 125 MINEADLDGDGQVNYDEFVKMMM 147
++ AD D +G ++Y EFV + M
Sbjct: 112 ILGAADFDRNGYIDYSEFVTVAM 134
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 86/144 (59%), Gaps = 16/144 (11%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQN----PTEEELQDMINEVDSDRNGTIEFG 67
+ K F + D+DG G IT E+L + L+++ P +L +++++DSD +G I++
Sbjct: 53 KLKSTFLVLDEDGKGYITKEQLK---KGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYT 107
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEK--LTD---DEV 122
EF+ A ++ +++ + AF+VFD D +G I+ EL H++ N +K +T + V
Sbjct: 108 EFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRV 165
Query: 123 EQMINEADLDGDGQVNYDEFVKMM 146
++MI + D + DG++++ EF +MM
Sbjct: 166 KRMIRDVDKNNDGKIDFHEFSEMM 189
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSL--------DQNPTEEELQDMI 53
S++ + E+ E + F DK+GDG + +EL L D E E+ ++
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 54 NEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL 113
D DRNG I++ EF+ + A K ++++L+ AF+ FD+D NG IS EL V
Sbjct: 397 GAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV---F 452
Query: 114 G-EKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
G + L ++MI+ D + DG V+++EF KM+ +
Sbjct: 453 GLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 489
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL-GEKLT-------DDE 121
L MA K+ + +EL + F+ DK+ +G + EL L GE++ + E
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 122 VEQMINEADLDGDGQVNYDEFVKMMM 147
V+ ++ AD D +G ++Y EFV + M
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAM 417
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
+++ L + +I + F D D G ++ +E+ ++ + ++ ++ ++DS+
Sbjct: 47 IAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNA 106
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMI--NLGEKLT 118
+G I + +FL K E L FK FD D NG IS EL+ + ++ L
Sbjct: 107 SGQIHYTDFLAATIDKQTYLKKEVCLI-PFKFFDIDGNGKISVEELKRIFGRDDIENPLI 165
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMM 146
D ++ ++ E DL+GDG++++ EF+ MM
Sbjct: 166 DKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSLD-QNP-TEEELQDMINEVDSDRNGTIEFGEFLNLM 73
F FD DG+G I+VEEL + D +NP ++ + ++ EVD + +G I+F EF+ +M
Sbjct: 134 PFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
Query: 74 AKK 76
+KK
Sbjct: 194 SKK 196
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEA 129
L ++AK + + + L+ F D D +G +S+ E+ + +G + ++ Q++ +
Sbjct: 44 LTIIAKHLCDVEINN-LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDI 102
Query: 130 DLDGDGQVNYDEFV 143
D + GQ++Y +F+
Sbjct: 103 DSNASGQIHYTDFL 116
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%)
Query: 79 ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVN 138
E D+ EE+ +AF++FD D +G I+ +LR V LGE LT++E+++MI EAD + D +++
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 139 YDEFVKMM 146
DEF+++M
Sbjct: 64 EDEFIRIM 71
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +AF LFD D G IT+++L V + L +N TEEELQ+MI E D + + I+ EF+
Sbjct: 10 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIR 69
Query: 72 LMAK 75
+M K
Sbjct: 70 IMKK 73
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%)
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEF 142
++EL+EAF+++DK+ NGYIS +R ++ L E L+ ++++ MI+E D DG G V+++EF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 143 VKMM 146
+ +M
Sbjct: 62 MGVM 65
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 45/62 (72%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E +EAF L+DK+G+G I+ + + ++ LD+ + E+L MI+E+D+D +GT++F EF+
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 63
Query: 72 LM 73
+M
Sbjct: 64 VM 65
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 50/68 (73%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDE 141
+EEEL + F++FDK+ +GYI EL+ ++ GE +T+D++E+++ + D + DG+++YDE
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 142 FVKMMMTI 149
F++ M +
Sbjct: 63 FLEFMKGV 70
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E + F +FDK+ DG I +EEL ++++ + TE+++++++ + D + +G I++ EFL
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 65
Query: 72 LM 73
M
Sbjct: 66 FM 67
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 50/68 (73%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDE 141
+EEEL + F++FDK+ +GYI EL+ ++ GE +T+D++E+++ + D + DG+++YDE
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 142 FVKMMMTI 149
F++ M +
Sbjct: 65 FLEFMKGV 72
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E + F +FDK+ DG I +EEL ++++ + TE+++++++ + D + +G I++ EFL
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 67
Query: 72 LM 73
M
Sbjct: 68 FM 69
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 50/68 (73%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDE 141
+EEEL + F++FDK+ +GYI EL+ ++ GE +T+D++E+++ + D + DG+++YDE
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 142 FVKMMMTI 149
F++ M +
Sbjct: 64 FLEFMKGV 71
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 41/62 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E + F +FDK+ DG I ++EL ++++ + TE+++++++ + D + +G I++ EFL
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 66
Query: 72 LM 73
M
Sbjct: 67 FM 68
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
++ EQ+ EF+ +F FD+ G + E+ + S+ N E E +++ VD +R G +
Sbjct: 719 ISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVV 778
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQ 124
F F++ M+++ +TD +++ +FK+ D+N YI+ ELR +L D+ E
Sbjct: 779 TFQAFIDFMSRETADTDTADQVMASFKILAGDKN-YITVDELR-------RELPPDQAEY 830
Query: 125 MINE-ADLDG----DGQVNYDEF 142
I A +G G ++Y F
Sbjct: 831 CIARMAPYNGRDAVPGALDYMSF 853
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDE 141
EEEL + F++FDK+ +GYI EL+ ++ GE +T+D++E+++ + D + DG+++YDE
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 142 FVKMMMTI 149
F++ M +
Sbjct: 68 FLEFMKGV 75
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E + F +FDK+ DG I +EEL ++++ + TE+++++++ + D + +G I++ EFL
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 70
Query: 72 LM 73
M
Sbjct: 71 FM 72
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 49/68 (72%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDE 141
EEEL + F++FDK+ +GYI EL+ ++ GE +T+D++E+++ + D + DG+++YDE
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 142 FVKMMMTI 149
F++ M +
Sbjct: 73 FLEFMKGV 80
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E + F +FDK+ DG I +EEL ++++ + TE+++++++ + D + +G I++ EFL
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 75
Query: 72 LM 73
M
Sbjct: 76 FM 77
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINL-GEKLTDDEVEQMINEADLDGDGQVNYDEF 142
+EL++AF+ FD + +G IS +ELR M L G ++ ++E++I + DL+GDG+V+++EF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 143 VKMM 146
V+MM
Sbjct: 67 VRMM 70
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRS-LDQNPTEEELQDMINEVDSDRNGTIEFGE 68
+ E ++AF FD +GDG I+ EL +R L +++++I +VD + +G ++F E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 69 FLNLMAK 75
F+ +M++
Sbjct: 66 FVRMMSR 72
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 19/161 (11%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELAT------VIRSLDQNP--------TEE 47
S++ T ++ + E F D + DG + +EL ++ +D N E+
Sbjct: 322 SKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIED 381
Query: 48 ELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETD--AEEELKEAFKVFDKDQNGYISATE 105
++ ++ +D D +G+IE+ EF+ A + T + E ++ AFK+FDKD +G IS E
Sbjct: 382 QIDSLMPLLDMDGSGSIEYSEFI---ASAIDRTILLSRERMERAFKMFDKDGSGKISTKE 438
Query: 106 LRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
L + + +E+E +I + D + DG+V+++EFV+M+
Sbjct: 439 LFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 45/60 (75%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E+ +AF+VFDK+ G +S +LR+++ LGEKLTD EV++++ ++D +G+++Y +F+
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFL 70
+F +AF +FDK+ G ++V +L ++ L + T+ E+ +++ V+ D NG I++ +F+
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLT 118
GT ++ F +L+ K K TDA+ +KE F++ DKDQ+G+I EL+ V+ G L
Sbjct: 22 GTFDYKRFFHLVGLKGK-TDAQ--VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78
Query: 119 DDEVEQMINEADLDGDGQVNYDEFVKMM 146
D E + ++ D D DG++ DEF KM+
Sbjct: 79 DTETKALLAAGDSDHDGKIGADEFAKMV 106
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
L + + KE F + DKD G I EEL V++ + + E + ++ DSD +
Sbjct: 35 LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHD 94
Query: 62 GTIEFGEFLNLMAK 75
G I EF ++A+
Sbjct: 95 GKIGADEFAKMVAQ 108
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 47/65 (72%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDE 141
+EEEL F++FDK+ +G+I EL ++ GE + ++++E ++ ++D + DG++++DE
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 142 FVKMM 146
F+KMM
Sbjct: 68 FLKMM 72
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E F +FDK+ DG I +EEL ++R+ ++ EE+++D++ + D + +G I+F EFL
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 70
Query: 72 LM 73
+M
Sbjct: 71 MM 72
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 25 DGCITVEELATVIRSLDQNPTEEEL-QDMINEV-DSDRNGTIEFGEFLNLMAKKMKETDA 82
DG I EE +L +N L D I +V D RNG IEFGEF+ +
Sbjct: 53 DGLIHKEEFQL---ALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPV 109
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEK----LTDDEVEQMIN----EADLDGD 134
E++K AFK++D Q G+I EL+ +++ L + L++D +E M++ +AD D
Sbjct: 110 HEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKND 169
Query: 135 GQVNYDEF 142
G+++ DE+
Sbjct: 170 GKIDIDEW 177
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 25 DGCITVEELATVIRSLDQNPTEEEL-QDMINEV-DSDRNGTIEFGEFLNLMAKKMKETDA 82
DG I EE +L +N L D I +V D RNG IEFGEF+ +
Sbjct: 53 DGLIHKEEFQL---ALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPV 109
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEK----LTDDEVEQMIN----EADLDGD 134
E++K AFK++D Q G+I EL+ +++ L + L++D +E M++ +AD D
Sbjct: 110 HEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKND 169
Query: 135 GQVNYDEF 142
G+++ DE+
Sbjct: 170 GKIDIDEW 177
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L+ EQ E KEAF LFD + G I EL +R+L + + E+ +++NE D + NG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 65 EFGEFLNLMAKKMKETD 81
F +FL++M +K+K D
Sbjct: 61 GFDDFLDIMTEKIKNRD 77
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEF 142
++E+KEAF +FD ++ G I EL+ M LG + E+ +++NE D +G+G + +D+F
Sbjct: 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDF 65
Query: 143 VKMM 146
+ +M
Sbjct: 66 LDIM 69
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKK 76
F +FDKD +G I EE TV+ + + EE+L D + +G I F E L ++A
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 77 MK-----------ETDAEEELKEAFKVFDKDQNGYISATELR 107
K E E +K+ FK+ DK+++GYI+ E R
Sbjct: 129 YKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 26 GCITVEELATVIRSLDQNPTEEELQDMINEV-DSDRNGTIEFGEFLNLMAKKMKETDAEE 84
G + E+ + + + E+ + + V D D NG I F EF+ +++ + T EE
Sbjct: 41 GQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGT-LEE 99
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMIN----LGEKLTDDE--------VEQMINEADLD 132
+L AF+++D + +GYI+ E+ ++ + +G +T +E V+++ D +
Sbjct: 100 KLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKN 159
Query: 133 GDGQVNYDEF 142
DG + DEF
Sbjct: 160 EDGYITLDEF 169
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 41/89 (46%)
Query: 61 NGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDD 120
+G + +F+ + + E+ F VFDKD NG+I E V+ ++
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99
Query: 121 EVEQMINEADLDGDGQVNYDEFVKMMMTI 149
++ DL+ DG + +DE + ++ ++
Sbjct: 100 KLSWAFELYDLNHDGYITFDEMLTIVASV 128
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKK 76
F D +GDG ++ EE+ + S E+ LQ + +D D NG I+ EF A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAA-A 64
Query: 77 MKETDAEEE---LKEAFKVFDKDQNGYISATELRHVMINLG-EKLTDDEVEQMINEADLD 132
+KE D +E LK +K+ D D +G ++ E+ G EK+ D I +AD +
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVD-----QIMKADAN 119
Query: 133 GDGQVNYDEFV 143
GDG + +EF+
Sbjct: 120 GDGYITLEEFL 130
Score = 32.3 bits (72), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L++E+ V K + L D DGDG +T EE+ T + E++ D I + D++ +G I
Sbjct: 70 LSDEK-VGLKILYKLMDADGDGKLTKEEVTTFFKKFGY----EKVVDQIMKADANGDGYI 124
Query: 65 EFGEFL 70
EFL
Sbjct: 125 TLEEFL 130
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEA-DLDGDGQVNYDEFVKMMMT 148
FK D + +G +S E++ ++ + ++++ Q+I +A D+DG+G+++ EF K
Sbjct: 6 FKQLDANGDGSVSYEEVK-AFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 149 I 149
+
Sbjct: 65 V 65
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDR 60
M+E L+ E+I KE F + D D G IT +EL ++ + E E++D+++ D D+
Sbjct: 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 61 NGTIEFGEFL 70
+GTI++GEF+
Sbjct: 73 SGTIDYGEFI 82
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 75 KKMKETDAEEE---LKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADL 131
K M E +EEE LKE FK+ D D +G I+ EL+ + +G +L + E++ +++ AD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 132 DGDGQVNYDEFV 143
D G ++Y EF+
Sbjct: 71 DKSGTIDYGEFI 82
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
L E+I E +EAF FDKD DG I +L +R++ PTE EL ++ +++ + G +
Sbjct: 4 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 63
Query: 65 EFGEFLNLMAKKM 77
+F +F+ LM K+
Sbjct: 64 DFDDFVELMGPKL 76
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 45/63 (71%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
EEL+EAF+ FDKD++GYI+ +L + M +G T+ E+ ++ + +++ G V++D+FV
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 144 KMM 146
++M
Sbjct: 70 ELM 72
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 81 DAEEELKEAFKVFDKDQNGYISATELRHVMINLG-EKLTDDEVEQMINEADLDGDGQVNY 139
D EEE+ AFKVFD + +G I E + +M +G E LTD EVE+ + EAD DG+G ++
Sbjct: 5 DDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDI 64
Query: 140 DEFVKMM 146
EF+ ++
Sbjct: 65 PEFMDLI 71
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSLDQNP-TEEELQDMINEVDSDRNGTIEFGEFLNLMA 74
AF +FD +GDG I +E +++ + + P T+ E+++ + E D D NG I+ EF++L+
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72
Query: 75 K 75
K
Sbjct: 73 K 73
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 46 EEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATE 105
EEE+ D++ +G I+F EF +M K +E + E++EA K D+D NG I E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 106 L 106
Sbjct: 67 F 67
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 21 DKDGDGCITVEELATVIRSLDQNPTEE-ELQDMINEVDSDRNGTIEFGEFLNLMAKKMKE 79
DKD G I+ EL + + P ++ +I+ D + + F EF +
Sbjct: 36 DKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI--- 92
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
+ + F+ +D+D +G I EL+ + G +L+D + +I + D G GQ+ +
Sbjct: 93 ----TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAF 148
Query: 140 DEFVK 144
D+F++
Sbjct: 149 DDFIQ 153
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEF 69
I +++ F +D+D G I EL + +++ +I + D G I F +F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISAT 104
+ + + L + F+ +D DQ+G+I +
Sbjct: 152 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 179
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 21 DKDGDGCITVEELATVIRSLDQNPTEE-ELQDMINEVDSDRNGTIEFGEFLNLMAKKMKE 79
DKD G I+ EL + + P ++ +I+ D + + F EF +
Sbjct: 13 DKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK----- 67
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
+ + F+ +D+D +G I EL+ + G +L+D + +I + D G GQ+ +
Sbjct: 68 --YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAF 125
Query: 140 DEFVK 144
D+F++
Sbjct: 126 DDFIQ 130
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEF 69
I +++ F +D+D G I EL + +++ +I + D G I F +F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISAT 104
+ + + L + F+ +D DQ+G+I +
Sbjct: 129 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 156
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMIN-LGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
L F+ DKD++G IS TEL+ + N V +I+ D + VN+ EF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 145 MMMTI 149
+ I
Sbjct: 65 VWKYI 69
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 21 DKDGDGCITVEELATVIRSLDQNPTEE-ELQDMINEVDSDRNGTIEFGEFLNLMAKKMKE 79
DKD G I+ EL + + P ++ +I+ D + + F EF +
Sbjct: 14 DKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYIT-- 71
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
+ + F+ +D+D +G I EL+ + G +L+D + +I + D G GQ+ +
Sbjct: 72 -----DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAF 126
Query: 140 DEFVK 144
D+F++
Sbjct: 127 DDFIQ 131
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEF 69
I +++ F +D+D G I EL + +++ +I + D G I F +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISAT 104
+ + + L + F+ +D DQ+G+I +
Sbjct: 130 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 157
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMIN-LGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
L F+ DKD++G IS TEL+ + N V +I+ D + VN+ EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 145 MMMTI 149
+ I
Sbjct: 66 VWKYI 70
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 21 DKDGDGCITVEELATVIRSLDQNPTEE-ELQDMINEVDSDRNGTIEFGEFLNLMAKKMKE 79
DKD G I+ EL + + P ++ +I+ D + + F EF +
Sbjct: 35 DKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYIT-- 92
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
+ + F+ +D+D +G I EL+ + G +L+D + +I + D G GQ+ +
Sbjct: 93 -----DWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAF 147
Query: 140 DEFVK 144
D+F++
Sbjct: 148 DDFIQ 152
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEF 69
I +++ F +D+D G I EL + +++ +I + D G I F +F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISAT 104
+ + + L + F+ +D DQ+G+I +
Sbjct: 151 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 178
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMIN-LGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
L F+ DKD++G IS TEL+ + N V +I+ D + VN+ EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 145 MMMTI 149
+ I
Sbjct: 87 VWKYI 91
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 21 DKDGDGCITVEELATVIRSLDQNPTEE-ELQDMINEVDSDRNGTIEFGEFLNLMAKKMKE 79
DKD G I+ EL + + P ++ +I+ D + + F EF +
Sbjct: 17 DKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI--- 73
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
+ + F+ +D+D +G I EL+ + G +L+D + +I + D G GQ+ +
Sbjct: 74 ----TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAF 129
Query: 140 DEFVK 144
D+F++
Sbjct: 130 DDFIQ 134
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEF 69
I +++ F +D+D G I EL + +++ +I + D G I F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISAT 104
+ + + L + F+ +D DQ+G+I +
Sbjct: 133 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMIN-LGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
L F+ DKD++G IS TEL+ + N V +I+ D + VN+ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 145 MMMTI 149
+ I
Sbjct: 69 VWKYI 73
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
E E F D DG G I+V EL + S + + +++ D + +G I F EF +
Sbjct: 28 ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKD 87
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADL 131
L + ++E F+ D +G + + E+R +++ G ++++ + ++ + D
Sbjct: 88 LHHFIL-------SMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDR 140
Query: 132 DGDGQVNYDEFVKMMMTI 149
G + +D++V++ + +
Sbjct: 141 QRRGSLGFDDYVELSIFV 158
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 71 NLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEAD 130
+ A + + +EL E F+ D D +G IS EL + + G + E++++ D
Sbjct: 14 GVYAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYD 73
Query: 131 LDGDGQVNYDEF 142
+ G++ +DEF
Sbjct: 74 KNHSGEITFDEF 85
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEF 69
I+ +E F D GDG + E+ + S +E+ Q ++ + D R G++ F ++
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISAT 104
+ L + ++ F +D+++ G ++ T
Sbjct: 152 VELSIFVCR-------VRNVFAFYDRERTGQVTFT 179
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSLDQNPTEE-ELQDMINEVDSDRNGTIEFGEFLNLMA 74
F DKD G I+ EL + + P ++ +I+ D + + F EF +
Sbjct: 12 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 71
Query: 75 KKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGD 134
+ + F+ +D+D +G I EL+ + G +L+D + +I + D G
Sbjct: 72 YIT-------DWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGR 124
Query: 135 GQVNYDEFVK 144
GQ+ +D+F++
Sbjct: 125 GQIAFDDFIQ 134
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEF 69
I +++ F +D+D G I EL + +++ +I + D G I F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 70 LNLMAKKMKETDAEEELKEAFKVFDKDQNGYISAT 104
+ + + L + F+ +D DQ+G+I +
Sbjct: 133 I-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 160
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMIN-LGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
L F+ DKD++G IS TEL+ + N V +I+ D + VN+ EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 145 MMMTI 149
+ I
Sbjct: 69 VWKYI 73
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
FK FD + +G IS++EL + LG +T DEV +M+ E D DGDG +++DEF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFT 69
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 6 TNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIE 65
T + I + + F FD +GDG I+ EL +++L + T +E++ M+ E+D+D +G I
Sbjct: 6 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAEIDTDGDGFIS 64
Query: 66 FGEFLNL 72
F EF +
Sbjct: 65 FDEFTDF 71
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
++ QI F DK +G ++ E+ I L NP + + IN S+ +
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQR-IPELAINPLGDRI---INAFFSEGEDQV 78
Query: 65 EFGEFLNLMAK--------KMKETDAEEELKE-------AFKVFDKDQNGYISATELRHV 109
F F+ +A K K+ + E L AF+++D D++ IS EL V
Sbjct: 79 NFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQV 138
Query: 110 M-INLGEKLTDDEV----EQMINEADLDGDGQVNYDEFVKMM 146
+ + +G ++D+++ ++ I EAD DGD +++ EFVK++
Sbjct: 139 LRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDM----INEVDSDRNGTIEFGEFL 70
AF L+D D D I+ +EL V+R + N ++E+L + I E D D + I F EF+
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 71 NLMAK 75
++ K
Sbjct: 178 KVLEK 182
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
E + FK FD + +G ISA EL + LG +T DEV+ M+ E D DGDG +++ EF
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEFT 67
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNL 72
F FD +GDG I+ EL +++L + T +E++ M+ E+D+D +G I F EF +
Sbjct: 15 FKRFDANGDGKISAAELGEALKTL-GSITPDEVKHMMAEIDTDGDGFISFQEFTDF 69
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 60/107 (56%), Gaps = 13/107 (12%)
Query: 50 QDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHV 109
+ + D++ +GTI+F EF+ ++ + E++LK AF ++D D NGYIS E+ +
Sbjct: 66 EHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGNGYISKAEMLEI 124
Query: 110 ------MINLGEKLTDDE------VEQMINEADLDGDGQVNYDEFVK 144
M++ K+ +DE E++ + D + DG+++ +EF++
Sbjct: 125 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSL------------DQNPTEEELQDMINEVDSD 59
+ K AF ++D DG+G I+ E+ +++++ D++ E+ + + ++D++
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTN 159
Query: 60 RNGTIEFGEFLN 71
R+G + EF+
Sbjct: 160 RDGKLSLEEFIR 171
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 15 EAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMA 74
F FD +GDG I E + + E++L+ + D D NG I E L ++
Sbjct: 67 HVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQ 126
Query: 75 KKMK-----------ETDAEEELKEAFKVFDKDQNGYISATEL 106
K E+ E+ ++ F+ D +++G +S E
Sbjct: 127 AIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 83 EEELKEAFKVFDKD-QNGYISATELRHVMINLGEKLTDDE-VEQMINEADLDGDGQVNYD 140
E E++E +K F +D +G++S E + + N + E + D +GDG +++
Sbjct: 24 EHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFR 83
Query: 141 EFV 143
EF+
Sbjct: 84 EFI 86
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINEADLDGDGQVNYDE 141
++K+ F+ D DQ+GY+ EL++ + +LT+ E + +++ AD DGDG++ DE
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
Query: 142 FVKMMMT 148
F +M+ +
Sbjct: 102 FQEMVHS 108
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 44 PTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISA 103
PTE + M+ E S ++ + L +MA+KM + EL + F + + I+A
Sbjct: 3 PTE---KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITA 59
Query: 104 TELRHVMINLG-EKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTIG 150
LR LG E ++ ++ + M+ E DLDGDG +N EF +M+ +
Sbjct: 60 ESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 62 GTIEFGEFLNLMA-KKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKL 117
G+ +F L+ K M D +K+ FK D D +G+I EL+ V+ + G L
Sbjct: 23 GSFNHKKFFALVGLKAMSAND----VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL 78
Query: 118 TDDEVEQMINEADLDGDGQVNYDEF 142
TD E + + AD DGDG++ DEF
Sbjct: 79 TDAETKAFLKAADKDGDGKIGIDEF 103
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSL---DQNPTEEELQDMINEVDSDRNGTIEFGEFL 70
K+ F D D G I EEL V++S ++ T+ E + + D D +G I EF
Sbjct: 45 KKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFE 104
Query: 71 NLM 73
L+
Sbjct: 105 TLV 107
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 73 MAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINEA 129
M+KK + +LKE F++ D DQ+G+I EL++ + LT E + + A
Sbjct: 35 MSKK-----SSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAA 89
Query: 130 DLDGDGQVNYDEFVKMMMT 148
D DGDG++ +EF +M+ +
Sbjct: 90 DHDGDGKIGAEEFQEMVQS 108
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 26 GCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEE 85
G + + E + D + ++ M D++ + TI+F E++ + ++ T E +
Sbjct: 38 GTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT-LEHK 96
Query: 86 LKEAFKVFDKDQNGYISATELRHVMINL----------------GEKLTDDE-VEQMINE 128
LK FK++DKD+NG I EL ++ ++ G+ LT +E V+++
Sbjct: 97 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLL 156
Query: 129 ADLDGDGQVNYDEFV 143
D +GDGQ++ +EFV
Sbjct: 157 VDENGDGQLSLNEFV 171
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINEADLDGDGQVNYD 140
+++K+AF V D+D++G+I EL+ + N LTD E + + + D DGDG + D
Sbjct: 41 DDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVD 100
Query: 141 EFVKMM 146
EF M+
Sbjct: 101 EFAAMI 106
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 21 DKDGDGCITVEELATVIRS 39
DKDGDG I V+E A +I++
Sbjct: 90 DKDGDGMIGVDEFAAMIKA 108
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
L ++ + + K+AF + D+D G I +EL +++ + T+ E + + + D D +
Sbjct: 35 LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 94
Query: 62 GTIEFGEFLNLM 73
G I EF ++
Sbjct: 95 GMIGVDEFAAMI 106
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINE 128
AK + + +++K+AF + D+D++G+I EL+ + N LTD E + +
Sbjct: 30 FFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKA 89
Query: 129 ADLDGDGQVNYDEFVKMM 146
D DGDG++ DEF ++
Sbjct: 90 GDSDGDGKIGVDEFTALV 107
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
LT++ + K+AF + D+D G I +EL +++ + T+ E + + DSD +
Sbjct: 36 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 95
Query: 62 GTIEFGEFLNLM 73
G I EF L+
Sbjct: 96 GKIGVDEFTALV 107
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
++ QI F DK +G ++ E+ I L NP + + IN + +
Sbjct: 23 FSHSQITRLYSRFTSLDKGENGTLSREDFQR-IPELAINPLGDRI---INAFFPEGEDQV 78
Query: 65 EFGEFLNLMAK--------KMKETDAEEELKE-------AFKVFDKDQNGYISATELRHV 109
F F+ +A K K+ + E L AF+++D D++ IS EL V
Sbjct: 79 NFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQV 138
Query: 110 M-INLGEKLTDDEV----EQMINEADLDGDGQVNYDEFVKMM 146
+ + +G ++D+++ ++ I EAD DGD +++ EFVK++
Sbjct: 139 LRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDM----INEVDSDRNGTIEFGEFL 70
AF L+D D D I+ +EL V+R + N ++E+L + I E D D + I F EF+
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 71 NLMAK 75
++ K
Sbjct: 178 KVLEK 182
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
++++ FK FD + +G IS +EL + LG + DEV++M+ E D DGDG ++++EF+
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEFI 61
Query: 144 KM 145
Sbjct: 62 SF 63
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNL 72
F FD +GDG I++ EL +R+L + + +E+Q M+ E+D+D +G I+F EF++
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTL-GSTSADEVQRMMAEIDTDGDGFIDFNEFISF 63
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
++++ FK FD + +G IS +EL + LG + DEV++M+ E D DGDG ++++EF+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEFI 60
Query: 144 KM 145
Sbjct: 61 SF 62
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNL 72
F FD +GDG I++ EL +R+L + + +E+Q M+ E+D+D +G I+F EF++
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTL-GSTSADEVQRMMAEIDTDGDGFIDFNEFISF 62
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 82 AEEELKEAFKVF---DKDQNGYISATELRHVMINLGEKLTD--DEVEQMINEADLDGDGQ 136
+ EE+K AF+VF + D N IS EL+ VM LG L +++MI E D +GDG+
Sbjct: 3 SPEEIKGAFEVFAAKEGDPN-QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 137 VNYDEFVKMMMTI 149
V+++EF+ MM I
Sbjct: 62 VSFEEFLVMMKKI 74
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 12 EFKEAFCLFD-KDGDG-CITVEELATVIRSLDQNPTE--EELQDMINEVDSDRNGTIEFG 67
E K AF +F K+GD I+ EEL V+++L + + L +MI EVD + +G + F
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 68 EFLNLMAK 75
EFL +M K
Sbjct: 66 EFLVMMKK 73
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 26 GCITVEELATVI--RSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAE 83
G T+ E T++ + L+Q + + + N D++++G ++F EF+ + M+E E
Sbjct: 35 GLQTLHEFKTLLGLQGLNQK-ANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEK-ME 92
Query: 84 EELKEAFKVFDKDQNGYISATELRHVM-----INLGEKLTDDE-VEQMINEADLDGDGQV 137
++LK FK++D D NG I EL + +N + L+ +E + + ++ D++ DG++
Sbjct: 93 QKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGEL 152
Query: 138 NYDEFVKMM 146
+EF+ M
Sbjct: 153 TLEEFINGM 161
Score = 32.3 bits (72), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 12 EFKEAFCLFDKDGDGCITVEELA---TVIRSLD--QNPTEEELQDMI-NEVDSDRNGTIE 65
+ K F L+D DG+G I EL +++L+ Q + EE +++ +++D + +G +
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELT 153
Query: 66 FGEFLNLMAK 75
EF+N MAK
Sbjct: 154 LEEFINGMAK 163
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 15 EAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNL 72
+ + FD + DG + E + + Q E++L+ D+D NG+I+ E L++
Sbjct: 61 QVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDM 118
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/82 (18%), Positives = 40/82 (48%)
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
EF L+ + A + + + + FD +++G++ E + + ++ + +++
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 128 EADLDGDGQVNYDEFVKMMMTI 149
D DG+G ++ +E + M M +
Sbjct: 101 LYDADGNGSIDKNELLDMFMAV 122
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSLDQNPTEE-ELQDMINEVDSDRNGTIEFGEFLNLMA 74
F DKD G I+ EL + + P ++ +I+ D + + F EF +
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK 68
Query: 75 KKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGD 134
+ + F+ +D+D +G I EL+ + G +L+D + +I + D G
Sbjct: 69 YIT-------DWQNVFRTYDRDNSGMIDKNELKQAL--SGYRLSDQFHDILIRKFDRQGR 119
Query: 135 GQVNYDEFVK 144
GQ+ +D+F++
Sbjct: 120 GQIAFDDFIQ 129
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 10 IVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQD-MINEVDSDRNGTIEFGE 68
I +++ F +D+D G I EL ++L ++ D +I + D G I F +
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELK---QALSGYRLSDQFHDILIRKFDRQGRGQIAFDD 126
Query: 69 FLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISAT 104
F+ + + L + F+ +D DQ+G+I +
Sbjct: 127 FI-------QGCIVLQRLTDIFRRYDTDQDGWIQVS 155
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMIN-LGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
L F+ DKD++G IS TEL+ + N V +I+ D + VN+ EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 145 MMMTI 149
+ I
Sbjct: 66 VWKYI 70
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 52 MINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATEL----- 106
+ N D+D NG I F +F+ ++ ++ T E+LK AF ++D +++G I+ E+
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGT-VHEKLKWAFNLYDINKDGCITKEEMLAIMK 192
Query: 107 -------RHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
RH L E + VE+ + D + DG V DEF+
Sbjct: 193 SIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFL 236
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 12/71 (16%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRS------------LDQNPTEEELQDMINEVDSD 59
+ K AF L+D + DGCIT EE+ +++S L ++ E ++ ++D +
Sbjct: 166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRN 225
Query: 60 RNGTIEFGEFL 70
++G + EFL
Sbjct: 226 QDGVVTIDEFL 236
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMA-- 74
F FD DG+G I E+ + L + E+L+ N D +++G I E L +M
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194
Query: 75 ---------KKMKETDAEEELKEAFKVFDKDQNGYISATEL 106
++E E ++ F+ D++Q+G ++ E
Sbjct: 195 YDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKK 76
F D +GDG ++ EE+ + E+ LQ + +D+D NG I+ EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 77 MKE--TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGD 134
+ +D + LK +K+ D D +G ++ E+ +K ++V + + +AD +GD
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF----KKHGIEKVAEQVMKADANGD 121
Query: 135 GQVNYDEFVKMMM 147
G + +EF++ +
Sbjct: 122 GYITLEEFLEFSL 134
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 11 VEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFL 70
+ K + L D DGDG +T EE+ + + E++ + + + D++ +G I EFL
Sbjct: 75 IGLKVLYKLMDVDGDGKLTKEEVTSFFK----KHGIEKVAEQVMKADANGDGYITLEEFL 130
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEA-DLDGDGQVNYDEFVKMMMT 148
FK D + +G +S E++ ++ + ++++ Q+I ++ D DG+G+++ +EF K +
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 149 I 149
I
Sbjct: 65 I 65
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKK 76
F D +GDG ++ EE+ + E+ LQ + +D+D NG I+ EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 77 MKE--TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGD 134
+ +D + LK +K+ D D +G ++ E+ +K ++V + + +AD +GD
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF----KKHGIEKVAEQVMKADANGD 121
Query: 135 GQVNYDEFVKMMM 147
G + +EF++ +
Sbjct: 122 GYITLEEFLEFSL 134
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 11 VEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFL 70
+ K + L D DGDG +T EE+ + + E++ + + + D++ +G I EFL
Sbjct: 75 IGLKVLYKLMDVDGDGKLTKEEVTSFFK----KHGIEKVAEQVMKADANGDGYITLEEFL 130
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEA-DLDGDGQVNYDEFVKMMMT 148
FK D + +G +S E++ ++ + ++++ Q+I ++ D DG+G+++ +EF K +
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 149 I 149
I
Sbjct: 65 I 65
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 25/163 (15%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
+ ++ F D++ G ++ +L I +L NP + + I D + +
Sbjct: 23 FSQASLLRLHHRFRALDRNKKGYLSRMDLQQ-IGALAVNPLGDRI---IESFFPDGSQRV 78
Query: 65 EFGEFLNLMA--KKMKETDAEEE--------------LKEAFKVFDKDQNGYISATELRH 108
+F F+ ++A + +++ D E + L AF+++D D++G IS E+
Sbjct: 79 DFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQ 138
Query: 109 VM-INLGEKLTDDEVE----QMINEADLDGDGQVNYDEFVKMM 146
V+ + +G ++T++++E + + EAD DGDG V++ EF K +
Sbjct: 139 VLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINE 128
AK + + +++K+AF + D+D++G+I EL+ + N LTD E + +
Sbjct: 29 FFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKA 88
Query: 129 ADLDGDGQVNYDEFVKMM 146
D DGDG++ DE+ ++
Sbjct: 89 GDSDGDGKIGVDEWTALV 106
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
LT++ + K+AF + D+D G I +EL +++ + T+ E + + DSD +
Sbjct: 35 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 62 GTIEFGEFLNLM 73
G I E+ L+
Sbjct: 95 GKIGVDEWTALV 106
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 87 KEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
K F+ FDK+++G +S E R V + T +++ + E D+DG+G++N DEF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLM 73
K F FDK+ DG ++++E V + T+E++ E+D D NG + EF + +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 74 AKKM 77
K +
Sbjct: 64 EKML 67
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 52 MINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHV-- 109
+ N D+D+NG I+F EF+ ++ + + ++L AF+++D D NG IS E+ +
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSR-GELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 110 ----MINLGEKLTDDE------VEQMINEADLDGDGQVNYDEFV 143
M+ KL +DE V ++ N D + DGQ+ +EF
Sbjct: 127 AIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFC 170
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 45 TEEELQDMINEVDSDR---------------NGTIEFGEFLNLMAKKMKETDAEEELKEA 89
++++LQD++ D+ +G + EF + + D +
Sbjct: 9 SQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYV 68
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
F VFD D+NGYI E + +D++ DLD +G ++YDE ++++ I
Sbjct: 69 FNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAI 128
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNG-TIEFGEFLNL 72
K+ F LFDK G G I + L +R++ NPT + +QD+IN S R+ ++ + L
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 73 MAKKMKETDA 82
+ KE DA
Sbjct: 67 IEVNEKELDA 76
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 26 GCITVEELATVIRSLDQNPTEEE-LQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEE 84
G +T+ E + +P+ + ++ M D +++G I+F E++ ++ +K ++
Sbjct: 30 GQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLK-GKVDQ 88
Query: 85 ELKEAFKVFDKDQNGYISATELRHVM-----IN-LGEKLTDDEVEQMI-NEADLDGDGQV 137
+L+ FK++D D NG I EL +++ IN E +T +E M+ ++ D++GDG++
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGEL 148
Query: 138 NYDEFV 143
+ +EF+
Sbjct: 149 SLEEFM 154
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 1 MSEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSL------DQNPTEEELQDMI- 53
+S VL + + + F L+D DG+GCI EL +I+++ ++ T EE +M+
Sbjct: 78 LSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVF 137
Query: 54 NEVDSDRNGTIEFGEFL 70
+++D + +G + EF+
Sbjct: 138 DKIDINGDGELSLEEFM 154
Score = 32.3 bits (72), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 34 ATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVF 93
+ + L + + + E S + EF +F L K A + +++ F+ F
Sbjct: 5 SKAVEELSATECHQWYKKFMTECPSGQLTLYEFKQFFGL---KNLSPSANKYVEQMFETF 61
Query: 94 DKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D +++GYI E + + + D ++ D+DG+G ++ E + ++ I
Sbjct: 62 DFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAI 117
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINEADLDGDGQVNYDE 141
++K+ F+ D DQ+GY+ EL+ + +LT+ E + ++ AD DGDG++ +E
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEE 102
Query: 142 FVKMMMT 148
F +M+ +
Sbjct: 103 FQEMVHS 109
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 25 DGCITVEELATVIRSLDQNPTEEELQDMINEV-DSDRNGTIEFGEFLNLMAKKMKETDAE 83
DG I EE + N E D + ++ D+ NG + F EF ++ +
Sbjct: 64 DGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPID 121
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMI--------NLGEKLTDDEVEQMINEADLDGDG 135
+++ +F+++D Q G+I E++ +++ NL + + +D +++ EAD DG
Sbjct: 122 DKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDG 181
Query: 136 QVNYDEFVKMMM 147
+++ +E+ +++
Sbjct: 182 KIDKEEWRSLVL 193
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELR---HVMINLGEKLTDDEVEQMINE 128
AK + +++K+AF V D+D++G+I EL+ V LTD E + +
Sbjct: 30 FFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKA 89
Query: 129 ADLDGDGQVNYDEFVKMM 146
D DGDG + DE+ ++
Sbjct: 90 GDSDGDGAIGVDEWAALV 107
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
LT + + K+AF + D+D G I +EL ++ T+ E + + DSD +
Sbjct: 36 LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGD 95
Query: 62 GTIEFGEFLNLM 73
G I E+ L+
Sbjct: 96 GAIGVDEWAALV 107
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 25 DGCITVEELATVIRSLDQNPTEEELQDMINEV-DSDRNGTIEFGEFLNLMAKKMKETDAE 83
DG I EE + N E D + ++ D+ NG + F EF ++ +
Sbjct: 33 DGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPID 90
Query: 84 EELKEAFKVFDKDQNGYISATELRHVMI--------NLGEKLTDDEVEQMINEADLDGDG 135
+++ +F+++D Q G+I E++ +++ NL + + +D +++ EAD DG
Sbjct: 91 DKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDG 150
Query: 136 QVNYDEFVKMMM 147
+++ +E+ +++
Sbjct: 151 KIDKEEWRSLVL 162
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 22 KDGDGCITVEELATVIRSLDQNPT---EEELQDMINEVDSDRNGTIEFGEFLNLMAKKMK 78
K +G + +E+ + R L P+ E++++D+ + ++ + ++L + +
Sbjct: 7 KSSNGKLRIEDASHNARKLGLAPSSTDEKKIRDLYGD-------SLTYEQYLEYLTXCVH 59
Query: 79 ETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVN 138
+ D EEL + F FD + +G+++ + ++++ G+ LT+ E +N + ++N
Sbjct: 60 DRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNA--FSSEDRIN 117
Query: 139 YDEFV 143
Y F
Sbjct: 118 YKLFC 122
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINE 128
AK + + +++K+AF + +D++G+I EL+ + N LTD E + +
Sbjct: 29 FFAKVGLTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKA 88
Query: 129 ADLDGDGQVNYDEFVKMM 146
D DGDG++ DE+ ++
Sbjct: 89 GDSDGDGKIGVDEWTALV 106
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
LT++ + K+AF + +D G I +EL +++ + T+ E + + DSD +
Sbjct: 35 LTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 62 GTIEFGEFLNLM 73
G I E+ L+
Sbjct: 95 GKIGVDEWTALV 106
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTI 64
+ N I E F D + +G ++ E+ TV+ S+ + ++ ++ +D + G I
Sbjct: 33 VINNHIKYINELFYKLDTNHNGSLSHREIYTVLASV--GIKKWDINRILQALDINDRGNI 90
Query: 65 EFGEFLNLMAKKMKETDAEEE-LKEAFKVFDKDQNGYISATEL 106
+ EF MA + + E LK AF DKD++GYIS +++
Sbjct: 91 TYTEF---MAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDI 130
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
+ D D++GY+S E + + +G LTDD+ N D + +GQ++ DEF+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
+ D D++GY+S E + + +G LTDD+ N D + +GQ++ DEF+
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 2 SEVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQ---------NPTEEELQDM 52
S ++T Q F E + FD DG G + +EL +I+ L Q +P + D
Sbjct: 10 SSLITASQ---FFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQ 66
Query: 53 INEVDSDRNGTIEFGEFLN-----LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELR 107
+ D + G +E L L+ + ++ + EE + ++ +D D +G+I EL+
Sbjct: 67 YGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELK 126
Query: 108 HVMINLGEKL---TDDE-----VEQMINEADLDGDGQVNYDEFVKMM 146
+ + +L EK DD + M+ D + DG++ E +++
Sbjct: 127 NFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSL--------DQNPTEEELQDMINEVDSDRNGT 63
EF + + +D D G I EEL ++ L D E M+ DS+ +G
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGK 163
Query: 64 IEFGEFL-------NLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEK 116
+E E N + K +E +AF+++D+D NGYI EL ++ +L EK
Sbjct: 164 LELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEK 223
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEE 47
EF +AF L+D+DG+G I EL +++ L + +E
Sbjct: 192 EFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQE 227
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINE 128
AK + + +++K+AF + +D++G+I EL+ + N LTD E + +
Sbjct: 29 FFAKVGLTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKA 88
Query: 129 ADLDGDGQVNYDEFVKMM 146
D DGDG++ D++ ++
Sbjct: 89 GDSDGDGKIGVDDWTALV 106
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Query: 83 EEELKEAFKVFDKDQNGYISATELRHVMINLG--EKLTDDEVE----QMINEADLDGDGQ 136
+ EL+ AFK D + +GY++A EL+ M+ L + L+ D+V+ ++I AD + DG+
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 137 VNYDEFV 143
++ +EF+
Sbjct: 66 ISKEEFL 72
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 11 VEFKEAFCLFDKDGDGCITVEELATVI------RSLDQNPTEEELQDMINEVDSDRNGTI 64
E + AF D +GDG +T EL T + ++L ++ +E +I D + +G I
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKI 66
Query: 65 EFGEFLN 71
EFLN
Sbjct: 67 SKEEFLN 73
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 18/156 (11%)
Query: 3 EVLTNEQIVE-FKEAFCLFDKDGDGCITVEELATVI-RSLDQNP-------TEEELQDMI 53
+VL+ E+I + FK F D D I+V+EL T++ R + ++ + E + M+
Sbjct: 525 KVLSEEEIDDNFKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMV 583
Query: 54 NEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL 113
N +D D NG + EF N++ +++ F+ FD D++G +SA E+R +
Sbjct: 584 NLMDRDGNGKLGLVEF-NILWNRIR------NYLTIFRKFDLDKSGSMSAYEMRMAIEAA 636
Query: 114 GEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
G KL ++ Q+I D + +++D FV+ ++ +
Sbjct: 637 GFKLP-CQLHQVIVARFADDELIIDFDNFVRCLVRL 671
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 27 CITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEEL 86
C+T +A + + E + M++ +D D +GT+ F EF L A
Sbjct: 57 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWA-------VLNGW 105
Query: 87 KEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
++ F FD D++G + EL+ + +G +L+ V + +G++ +D+++
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR--YSTNGKITFDDYI 160
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELR---HVMINLGEKLTDDEVEQMINE 128
AK + +++K+AF D+D++G+I EL+ V LTD E + +
Sbjct: 30 FFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKA 89
Query: 129 ADLDGDGQVNYDEFVKMM 146
D DGDG + +E+V ++
Sbjct: 90 GDSDGDGAIGVEEWVALV 107
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELA---TVIRSLDQNPTEEELQDMINEVDSDRN 61
L+ + + K+AF D+D G I +EL V ++ + T+ E + + DSD +
Sbjct: 36 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 95
Query: 62 GTIEFGEFLNLM 73
G I E++ L+
Sbjct: 96 GAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 72 LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELR---HVMINLGEKLTDDEVEQMINE 128
AK + +++K+AF D+D++G+I EL+ V LTD E + +
Sbjct: 29 FFAKCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKA 88
Query: 129 ADLDGDGQVNYDEFVKMM 146
D DGDG + +E+V ++
Sbjct: 89 GDSDGDGAIGVEEWVALV 106
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELA---TVIRSLDQNPTEEELQDMINEVDSDRN 61
L+ + + K+AF D+D G I +EL V ++ + T+ E + + DSD +
Sbjct: 35 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 94
Query: 62 GTIEFGEFLNLM 73
G I E++ L+
Sbjct: 95 GAIGVEEWVALV 106
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 17 FCLFDKDGDGCITVEELAT-----VIRSLDQNPTE-----EELQDMINEVDSDRNGTIEF 66
F D +G+G IT++E+ + + L P + E ++ ++ D +EF
Sbjct: 29 FNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGLDYGKEVEF 88
Query: 67 GEFLN----------LMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEK 116
F+N + + K++ + F +FDKD +G IS E + G
Sbjct: 89 PAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGIC 148
Query: 117 LTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
+D++ E+ DLD G+++ DE + +
Sbjct: 149 PSDEDAEKTFKHCDLDNSGKLDVDEMTRQHL 179
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 63 TIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEK---LTD 119
+ + F + + K D ++K+ F + D+D++G+I EL+ + N LT
Sbjct: 23 SFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 79
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMM 146
E + + D DGDG++ +EF ++
Sbjct: 80 AETKAFLAAGDTDGDGKIGVEEFQSLV 106
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
L+++ + K+ F + D+D G I EEL +++ + T E + + D+D +
Sbjct: 35 LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGD 94
Query: 62 GTIEFGEFLNLM 73
G I EF +L+
Sbjct: 95 GKIGVEEFQSLV 106
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 63 TIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEK---LTD 119
+ + F + + K D ++K+ F + D+D++G+I EL+ + N LT
Sbjct: 24 SFNYKSFFSTVGLSSKTPD---QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTS 80
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMM 146
E + + D DGDG++ +EF ++
Sbjct: 81 AETKAFLAAGDTDGDGKIGVEEFQSLV 107
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
L+++ + K+ F + D+D G I EEL +++ + T E + + D+D +
Sbjct: 36 LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGD 95
Query: 62 GTIEFGEFLNLM 73
G I EF +L+
Sbjct: 96 GKIGVEEFQSLV 107
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQ 124
+F ++ K K D ++K+ F + DKD++G+I EL ++ L+ E +
Sbjct: 29 KFFQMVGLKKKSAD---DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKM 85
Query: 125 MINEADLDGDGQVNYDEF 142
++ D DGDG++ DEF
Sbjct: 86 LMAAGDKDGDGKIGVDEF 103
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRNGTIEFGEFL 70
K+ F + DKD G I +EL +++ + + +E + ++ D D +G I EF
Sbjct: 45 KKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFS 104
Query: 71 NLMA 74
L+A
Sbjct: 105 TLVA 108
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 40 LDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNG 99
L NP +E + + + S ++ F +FL+L++ + + AF++FD D +G
Sbjct: 56 LKANPFKERICRVFST--SPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDG 113
Query: 100 YISATELRHVMINL-GE----KLTDDEVEQMIN----EADLDGDGQVNYDEF 142
++ +L ++ L GE +L+ E++Q+I+ E+D+D DG +N EF
Sbjct: 114 TLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 165
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSL-----DQNPTEEELQDMIN----EVDSDRNGTIEF 66
AF +FD D DG + E+L+ ++ L D + E++ +I+ E D DR+GTI
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 67 GEFLNLMAK 75
EF +++++
Sbjct: 163 SEFQHVISR 171
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 27 CITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEEL 86
C+T +A + + E + M++ +D D +GT+ F EF L A
Sbjct: 26 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWA-------VLNGW 74
Query: 87 KEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
++ F FD D++G + EL+ + +G +L V + G++ +D+++
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR--YSTSGKITFDDYI 129
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 13 FKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNL 72
FKE + FD +G+G I + L ++ L T EL+ +I EV S T + +FL +
Sbjct: 34 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 93
Query: 73 MAKK 76
M K
Sbjct: 94 MLGK 97
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQ 124
+F ++ K K D ++K+ F + DKD++G+I EL ++ L+ E +
Sbjct: 28 KFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKT 84
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
++ D DGDG++ +EF ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRNGTIEFGEFL 70
K+ F + DKD G I +EL ++++ + + +E + ++ D D +G I EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 71 NLMA 74
L+A
Sbjct: 104 TLVA 107
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 40 LDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNG 99
L NP +E + + + S ++ F +FL+L++ + + AF++FD D +G
Sbjct: 87 LKANPFKERICRVFST--SPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDG 144
Query: 100 YISATELRHVMINL-GE----KLTDDEVEQMIN----EADLDGDGQVNYDEF 142
++ +L ++ L GE +L+ E++Q+I+ E+D+D DG +N EF
Sbjct: 145 TLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 196
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSL-----DQNPTEEELQDMIN----EVDSDRNGTIEF 66
AF +FD D DG + E+L+ ++ L D + E++ +I+ E D DR+GTI
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 67 GEFLNLMAK 75
EF +++++
Sbjct: 194 SEFQHVISR 202
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQ 124
+F ++ K K D ++K+ F + DKD++G+I EL ++ L+ E +
Sbjct: 28 KFFQMVGLKKKSAD---DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKT 84
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
++ D DGDG++ +EF ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 5 LTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRN 61
L + + K+ F + DKD DG I +EL ++++ + + +E + ++ D D +
Sbjct: 35 LKKKSADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGD 94
Query: 62 GTIEFGEFLNLMA 74
G I EF L+A
Sbjct: 95 GKIGVEEFSTLVA 107
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD---DEVEQ 124
+F ++ K K D ++K+ F + DKD++G+I EL ++ D E +
Sbjct: 28 KFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKT 84
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
++ D DGDG++ +EF ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRNGTIEFGEFL 70
K+ F + DKD G I +EL ++++ + + +E + ++ D D +G I EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 71 NLMA 74
L+A
Sbjct: 104 TLVA 107
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 13 FKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNL 72
FKE + FD +G+G I + L ++ L T EL+ +I EV S T + +FL +
Sbjct: 53 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 112
Query: 73 MAKK 76
M K
Sbjct: 113 MLGK 116
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 17 FCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKK 76
F D+DG + +E + L + E + + + D + +GT++ EFL +
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102
Query: 77 MKETDAEEELKEAFKVFDKDQNGYISATELR-------HVMINLGEKLTDDEVEQMINEA 129
M + E + AF D+ +G ++ +LR H + GE D+ + + ++
Sbjct: 103 MSQAR-EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNF 161
Query: 130 D-LDGDGQVNYDEF 142
D + DGQV EF
Sbjct: 162 DSSEKDGQVTLAEF 175
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKM 145
L F+ D+D + + A E R + LG L E E + + D +G G ++ +EF++
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 146 M 146
+
Sbjct: 99 L 99
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 16 AFCLFDKDGDGCITVEELATVIRSLDQNP-------TEEE-LQDMINEVD-SDRNGTIEF 66
AF D+ GDG +TV++L V S +P TE+E L+ ++ D S+++G +
Sbjct: 114 AFAKLDRSGDGVVTVDDLRGVY-SGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTL 172
Query: 67 GEFLNLMAKKMKETDAEEEL 86
EF + + + +EE
Sbjct: 173 AEFQDYYSGVSASMNTDEEF 192
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 21 DKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKET 80
+K G I+++ + R L P+ + + I E+ D + + ++L ++ + +
Sbjct: 25 EKSSGGKISIDNASYNARKLGLAPSSID-EKKIKELYGDN---LTYEQYLEYLSICVHDK 80
Query: 81 DAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMIN 127
D EEL + F FD + GY++ +++++++ G+ LTD E +N
Sbjct: 81 DNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALN 127
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 27 CITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEEL 86
C+T +A + + E + M++ +D D +GT+ F EF L A
Sbjct: 57 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWA-------VLNGW 105
Query: 87 KEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFV 143
++ F D D++G + EL+ + +G +L+ V + +G++ +D+++
Sbjct: 106 RQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR--YSTNGKITFDDYI 160
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 77 MKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQMINEADLDG 133
MK D ++K+ F + DKD++G+I EL ++ L+ E + ++ D DG
Sbjct: 1 MKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDG 57
Query: 134 DGQVNYDEFVKMM 146
DG++ +EF ++
Sbjct: 58 DGKIGVEEFSTLV 70
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRNGTIEFGEFL 70
K+ F + DKD G I +EL ++++ + + +E + ++ D D +G I EF
Sbjct: 8 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 67
Query: 71 NLMA 74
L+A
Sbjct: 68 TLVA 71
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVI 37
E K DKDGDG I VEE +T++
Sbjct: 45 ETKTLMAAGDKDGDGKIGVEEFSTLV 70
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Query: 25 DGCITVEELATVIRSLDQNPTE-----EELQDMINEVDSDRNGTIEFGEFLNLMAKKMKE 79
DG + EEL + N T E + MI +D D G + F F L A
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA----- 67
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
A KE F D+D +G + ELR + +G +L+ + ++ +G++ +
Sbjct: 68 --ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR--YSKNGRIFF 123
Query: 140 DEFV 143
D++V
Sbjct: 124 DDYV 127
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 13 FKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNL 72
+KE F D+DG G + EL I + + + L ++ +NG I F +++
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVAC 129
Query: 73 MAKKMKETD 81
K TD
Sbjct: 130 CVKLRALTD 138
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Query: 25 DGCITVEELATVIRSLDQNPTE-----EELQDMINEVDSDRNGTIEFGEFLNLMAKKMKE 79
DG + EEL + N T E + MI +D D G + F F L A
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA----- 67
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
A KE F D+D +G + ELR + +G +L+ + ++ +G++ +
Sbjct: 68 --ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR--YSKNGRIFF 123
Query: 140 DEFV 143
D++V
Sbjct: 124 DDYV 127
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 13 FKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNL 72
+KE F D+DG G + EL I + + + L ++ +NG I F +++
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVAC 129
Query: 73 MAKKMKETD 81
K TD
Sbjct: 130 CVKLRALTD 138
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 45 TEEEL----QDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGY 100
TEEEL Q + E S G I EF + +K E D + + F+ FD + +G
Sbjct: 23 TEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGT 79
Query: 101 ISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+ E + T+ ++E + D+DG+G ++ +E ++++ I
Sbjct: 80 LDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLM 73
+ F FD + DG + +E + T ++L+ + D D NGTI E L ++
Sbjct: 66 QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 74 AKKMK 78
K
Sbjct: 126 TAIFK 130
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 45 TEEEL----QDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGY 100
TEEEL Q + E S G I EF + +K E D + + F+ FD + +G
Sbjct: 23 TEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGT 79
Query: 101 ISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+ E + T+ ++E + D+DG+G ++ +E ++++ I
Sbjct: 80 LDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLM 73
+ F FD + DG + +E + T ++L+ + D D NGTI E L ++
Sbjct: 66 QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 74 AKKMK 78
K
Sbjct: 126 TAIFK 130
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 45 TEEEL----QDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGY 100
TEEEL Q + E S G I EF + +K E D + + F+ FD + +G
Sbjct: 24 TEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGT 80
Query: 101 ISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+ E + T+ ++E + D+DG+G ++ +E ++++ I
Sbjct: 81 LDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLM 73
+ F FD + DG + +E + T ++L+ + D D NGTI E L ++
Sbjct: 67 QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 126
Query: 74 AKKMKETDAE 83
K E
Sbjct: 127 TAIFKMISPE 136
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 45 TEEEL----QDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGY 100
TEEEL Q + E S G I EF + +K E D + + F+ FD + +G
Sbjct: 23 TEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGT 79
Query: 101 ISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+ E + T+ ++E + D+DG+G ++ +E ++++ I
Sbjct: 80 LDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLM 73
+ F FD + DG + +E + T ++L+ + D D NGTI E L ++
Sbjct: 66 QHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 74 AKKMK 78
K
Sbjct: 126 TAIFK 130
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 68 EFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL---GEKLTDDEVEQ 124
+F ++ K K D ++K+ F + DKD++G+I EL ++ L+ E +
Sbjct: 28 KFFQMVGLKKKSAD---DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKT 84
Query: 125 MINEADLDGDGQVNYDEFVKMM 146
++ D DG G++ +EF ++
Sbjct: 85 LMAAGDKDGSGKIEVEEFSTLV 106
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNP---TEEELQDMINEVDSDRNGTIEFGEFL 70
K+ F + DKD G I +EL ++++ + + +E + ++ D D +G IE EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEFS 103
Query: 71 NLMA 74
L+A
Sbjct: 104 TLVA 107
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 23/152 (15%)
Query: 17 FCLFDKDGDGCITVEELATVIRSL----------DQN-----PTEEELQDMINEVDSDRN 61
F FD+DG+G I + + ++L D+ E Q + D D +
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 62 GTIEFGEFLNLMAKKMKETD------AEEELKEAFKVFDKDQNGYISATELRHVMINLGE 115
I EF+ K++++ A L A V D D +G ++ + + G
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALTAFG- 128
Query: 116 KLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
+ +D Q D DGDG+V E V
Sbjct: 129 -VPEDLARQAAAALDTDGDGKVGETEIVPAFA 159
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 83 EEELKEAFKVFDKDQNGYISATEL----RHVMINLGEKLTDDEVEQMINE---------- 128
E + F FD+D NG+I ++ + ++ G D + +
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 129 -ADLDGDGQVNYDEFV 143
AD DGD ++ +EFV
Sbjct: 63 IADRDGDQRITREEFV 78
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELAT-----VIRSLDQNPTE-EELQDMINEVDSDRN 61
+ I K F D +G+G IT++E+ + + ++L P + + QD + R
Sbjct: 17 KWIKRHKFMFDYLDINGNGQITLDEIVSKASDDICKNLGATPAQTQRHQDCVEAFF--RG 74
Query: 62 GTIEFG------EFL----NL----MAKKMK--ETDAEEELKEAFKVFDKDQNGYISATE 105
+E+G EFL NL +AK + T E F +FDKD +G I+ E
Sbjct: 75 CGLEYGKETKFPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDE 134
Query: 106 LRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
+ G ++++ E+ DLD G+++ DE + +
Sbjct: 135 WKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTRQHL 176
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 35/151 (23%)
Query: 5 LTNEQIVEFKEAF-CLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGT 63
+T+E++ + K++F +D DG + +EELA I P EE
Sbjct: 50 ITDERVQQIKKSFXSAYDATFDGRLQIEELANXIL-----PQEEN--------------- 89
Query: 64 IEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINL----GEKLTD 119
FL L+ ++ D E + ++ +D D +GYISA EL++ + +L +K+
Sbjct: 90 -----FL-LIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPP 143
Query: 120 DEVEQMINEA----DLDGDGQVNYDEFVKMM 146
+++++ + D + DG+++ ++ +++
Sbjct: 144 NKLDEYTDAXXKIFDKNKDGRLDLNDLARIL 174
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 88 EAFKVFDKDQNGYISATEL----RHVMINL--GEKLTDDEVEQM----INEADLDGDGQV 137
+ ++ FD D NGYI EL RH + L +K+TD+ V+Q+ + D DG++
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRL 74
Query: 138 NYDEFVKMMMT 148
+E ++
Sbjct: 75 QIEELANXILP 85
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 45 TEEEL----QDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGY 100
TEEEL Q + E S G I EF + +K E D + + F+ FD + +G
Sbjct: 23 TEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGT 79
Query: 101 ISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+ + + T+ ++E + D+DG+G ++ +E ++++ I
Sbjct: 80 LDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLM 73
+ F FD + DG + ++ + T ++L+ + D D NGTI E L ++
Sbjct: 66 QHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 74 AKKMKETDAE 83
K E
Sbjct: 126 TAIFKMISPE 135
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 45 TEEEL----QDMINEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGY 100
TEEEL Q + E S G I EF + +K E D + + F+ FD + +G
Sbjct: 23 TEEELSSWYQSFLKECPS---GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGT 79
Query: 101 ISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+ + + T+ ++E + D+DG+G ++ +E ++++ I
Sbjct: 80 LDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLM 73
+ F FD + DG + ++ + T ++L+ + D D NGTI E L ++
Sbjct: 66 QHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 125
Query: 74 AKKMK 78
K
Sbjct: 126 TAIFK 130
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 82 AEEELKEAFKVFDKDQNGYISATEL------------RHVMINLGEKLTDDEVEQMINEA 129
E+LK AF ++D +++GYI+ E+ RH L E + VE+ +
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKM 66
Query: 130 DLDGDGQVNYDEFV 143
D + DG V +EF+
Sbjct: 67 DRNQDGVVTIEEFL 80
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRS------------LDQNPTEEELQDMINEVDSD 59
+ K AF L+D + DG IT EE+ +++S L ++ E ++ ++D +
Sbjct: 10 KLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRN 69
Query: 60 RNGTIEFGEFL 70
++G + EFL
Sbjct: 70 QDGVVTIEEFL 80
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 23/151 (15%)
Query: 17 FCLFDKDGDGCITVEELATVIRSL----------DQN-----PTEEELQDMINEVDSDRN 61
F FD+DG+G I + + +++ D+ E Q + D D +
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 62 GTIEFGEFLNLMAKKMKETD------AEEELKEAFKVFDKDQNGYISATELRHVMINLGE 115
I EF+ K++++ A L A V D D +G ++ + + G
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG- 128
Query: 116 KLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
+ +D Q D DGDG+V E V
Sbjct: 129 -VPEDLARQAAAALDTDGDGKVGETEIVPAF 158
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 83 EEELKEAFKVFDKDQNGYISATEL----RHVMINLGEKLTDDEVEQMINE---------- 128
E + F FD+D NG+I ++ + ++ G D + +
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 129 -ADLDGDGQVNYDEFV 143
AD DGD ++ +EFV
Sbjct: 63 IADRDGDQRITREEFV 78
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELAT-----VIRSLDQNPTEEELQDMINEVDSDRNG 62
I K F D +G+G IT++E+ + + L+ P + + + E G
Sbjct: 17 RWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCG 76
Query: 63 T-----IEFGEFLN----LMAKKMKETDAEE-----ELKEA-FKVFDKDQNGYISATELR 107
I F +FL+ L ++K+ E E +A F +FDKD +G I+ E +
Sbjct: 77 MEYGKEIAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 108 HVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
G + ++ E DLD G ++ DE + +
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHL 176
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELAT-----VIRSLDQNPTEEELQDMINEVDSDRNG 62
I K F D +G+G IT++E+ + + L+ P + + + E G
Sbjct: 17 RWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCG 76
Query: 63 T-----IEFGEFLN----LMAKKMKETDAEE-----ELKEA-FKVFDKDQNGYISATELR 107
I F +FL+ L ++K+ E E +A F +FDKD +G I+ E +
Sbjct: 77 MEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 108 HVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
G + ++ E DLD G ++ DE + +
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHL 176
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELAT-----VIRSLDQNPTEEELQDMINEVDSDRNG 62
I K F D +G+G IT++E+ + + L+ P + + + E G
Sbjct: 17 RWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCG 76
Query: 63 T-----IEFGEFLN----LMAKKMKETDAEE-----ELKEA-FKVFDKDQNGYISATELR 107
I F +FL+ L ++K+ E E +A F +FDKD +G I+ E +
Sbjct: 77 MEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 108 HVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
G + ++ E DLD G ++ DE + +
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHL 176
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 87 KEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
++ F DK +G+++ + R +++ L ++ + N +D+D DG++ +EF+ M
Sbjct: 17 RQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
Query: 147 MTI 149
I
Sbjct: 75 HLI 77
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 45 TEEELQDMINEVDSD-RNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISA 103
+EEEL D G I +F ++ AK +TD + + F+ FD + +G +
Sbjct: 31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDF 90
Query: 104 TELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
E + T+ ++E + D+DG+G ++ +E ++++ I
Sbjct: 91 KEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAI 136
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 14 KEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLNLM 73
+ F FD + DG + +E + T ++L+ + D D NGTI E L ++
Sbjct: 74 QHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 133
Query: 74 AKKMKETDAEE 84
K E+
Sbjct: 134 XAIFKXITPED 144
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELAT-----VIRSLDQNPTEEELQDMINEVDSDRNG 62
I K F D +G+G IT++E+ + + L+ P + + + E G
Sbjct: 17 RWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCG 76
Query: 63 T-----IEFGEFLN----LMAKKMKETDAEE-----ELKEA-FKVFDKDQNGYISATELR 107
I F +FL+ L ++K+ E E +A F +FDKD +G I+ E +
Sbjct: 77 MEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 108 HVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
G + ++ E DLD G ++ DE + +
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 176
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
Query: 8 EQIVEFKEAFCLFDKDGDGCITVEELAT-----VIRSLDQNPTEEELQDMINEVDSDRNG 62
I K F D +G+G IT++E+ + + L+ P + + + E G
Sbjct: 17 RWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCG 76
Query: 63 T-----IEFGEFLN----LMAKKMKETDAEE-----ELKEA-FKVFDKDQNGYISATELR 107
I F +FL+ L ++K+ E E +A F +FDKD +G I+ E +
Sbjct: 77 MEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK 136
Query: 108 HVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
G + ++ E DLD G ++ DE + +
Sbjct: 137 AYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTRQHL 176
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
F + DKDQNG IS E + + G + ++ E+ D+D GQ++ DE + +
Sbjct: 115 FDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 82 AEEELKEAFKVFDKDQNGYISATELRHVMINLG 114
+EEEL AF++FDK+ +GYI EL ++ G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 12 EFKEAFCLFDKDGDGCITVEELATVIRS 39
E AF +FDK+ DG I +EEL ++R+
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILRA 33
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKM 145
KE + FD + G I L+ +M LG T E+++MI+E ++Y +FV M
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 146 MM 147
M+
Sbjct: 112 ML 113
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKM 145
KE + FD + G I L+ +M LG T E+++MI+E ++Y +FV M
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 146 MM 147
M+
Sbjct: 112 ML 113
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 98 NGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
NG++S +++ V++N KL D + ++ +D+D DG ++ DEF M +
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 98 NGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
NG++S +++ V++N KL D + ++ +D+D DG ++ DEF M +
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 72
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 98 NGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
NG++S +++ V++N KL D + ++ +D+D DG ++ DEF M +
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 72
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 98 NGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
NG++S +++ V++N KL D + ++ +D+D DG ++ DEF M +
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 80 TDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNY 139
T + + F+ FD + IS E R + + LTD++ +++ NE ++ G++ Y
Sbjct: 20 TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKY 79
Query: 140 DEFV 143
+F+
Sbjct: 80 PDFL 83
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 21 DKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEF 69
D +GDG ++ EE+ + E+ LQ + +D+D NG I+ EF
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEA-DLDGDGQVNYDEFVKMMMT 148
FK D + +G +S E++ ++ + ++++ Q+I ++ D DG+G+++ +EF K +
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 149 I 149
I
Sbjct: 65 I 65
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
F + DKDQNG I+ E + G + ++ E+ D+D GQ++ DE + +
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 90 FKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMM 147
F + DKDQNG I+ E + G + ++ E+ D+D GQ++ DE + +
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTRQHL 172
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 26/30 (86%)
Query: 117 LTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
+T++++E ++ ++D + DG++++DEF+KMM
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 45 TEEELQDMINEVDSDRNGTIEFGEFLNLM 73
TEE+++D++ + D + +G I+F EFL +M
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
Query: 17 FCLFDKD-------GDGCITVEELATVIRSLDQNPT--------EEELQDMINEVDSDRN 61
FCL++ G CI ++ +R+ P + VD DR+
Sbjct: 8 FCLWNLQPIQGSWMGAACI--YQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRS 65
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATEL 106
GT+E E + + L+ ++FD D NG+IS E
Sbjct: 66 GTLEINELMMGQFPGGIRLSPQTALRMM-RIFDTDFNGHISFYEF 109
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 81 DAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYD 140
D + + F D+D++G + EL G +L+ +M+ D D +G +++
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 141 EFVKM 145
EF+ M
Sbjct: 108 EFMAM 112
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 7 NEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEF 66
E++ + F D + G + EE + L P + E + +D+DR+G I F
Sbjct: 23 GEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGAITF 80
Query: 67 GEF 69
EF
Sbjct: 81 QEF 83
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 81 DAEE--ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVN 138
D EE L+ F D +++G + E R + L ++ + E + D D DG +
Sbjct: 22 DGEELARLRSVFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAIT 79
Query: 139 YDEFVKMMM 147
+ EF + +
Sbjct: 80 FQEFARGFL 88
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 17 FCLFDKD-------GDGCITVEELATVIRS------LDQNPTEE--ELQDMINEVDSDRN 61
FCL++ G CI ++ +R+ L+ P ++ + VD DR+
Sbjct: 8 FCLWNLQPIQGSWMGAACI--YQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRS 65
Query: 62 GTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATEL 106
GT+E E + + L+ ++FD D NG+IS E
Sbjct: 66 GTLEINELMMGQFPGGIRLSPQTALRMM-RIFDTDFNGHISFYEF 109
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 81 DAEEELKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYD 140
D + + F D+D++G + EL G +L+ +M+ D D +G +++
Sbjct: 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 141 EFVKM 145
EF+ M
Sbjct: 108 EFMAM 112
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 101 ISATELRHVM---INLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTIG 150
+S EL+ ++ + +G KL D E+ +++ + D + D +VN+ E+V + +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALA 81
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 94 DKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
DK+ +G I+A E + LG ++ E + N+ D +G+G+++ DE + +
Sbjct: 112 DKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAV 162
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 21 DKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFL 70
DK+ DG I +E A + +L ++ E + N+VD++ NG + E L
Sbjct: 112 DKNADGQINADEFAAWLTALGM--SKAEAAEAFNQVDTNGNGELSLDELL 159
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 122 VEQMINEADLDGDGQVNYDEFVKMMMTIG 150
V+ ++ D + DGQ+N DEF + +G
Sbjct: 104 VKGIVGMCDKNADGQINADEFAAWLTALG 132
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 73 MAKKMKETDAEEELKEAFKVFDKD-----QNGYISATELRHVMINLGEKLTDDE-----V 122
MAK+ ET E ++ +F K N IS TE M T ++ +
Sbjct: 1 MAKRPTET--ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVL 58
Query: 123 EQMINEADLDGDGQVNYDEFVKMM 146
++M+ + DLD DGQ+++ EF+ ++
Sbjct: 59 DRMMKKLDLDSDGQLDFQEFLNLI 82
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 49 LQDMINEVDSDRNGTIEFGEFLNLMA 74
L M+ ++D D +G ++F EFLNL+
Sbjct: 58 LDRMMKKLDLDSDGQLDFQEFLNLIG 83
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 29.3 bits (64), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 85 ELKEAFKVFDKDQNGYISATELRHVMINLGEKLTD-DEVEQMINEADLDGDGQVNYDEFV 143
EL F DKD + + E + + L E D + + NE D +G G V +DEF
Sbjct: 134 ELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFS 193
Query: 144 KMMMT 148
+T
Sbjct: 194 CWAVT 198
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 101 ISATELRHVM---INLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTIG 150
+S EL+ ++ + +G KL D E+ ++ + D + D +VN+ E+V + +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFLGALA 81
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 43 NPTEEELQDMI----NEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQN 98
N T+ ELQ + NE S G + F + A+ DA F FD Q
Sbjct: 11 NFTKRELQVLYRGFKNECPS---GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQT 67
Query: 99 GYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
G + + + L +++ N D++ DG +N +E + ++ I
Sbjct: 68 GSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 101 ISATELRHVM---INLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
+S EL+ ++ + +G KL D E+ +++++ D + D +VN+ E++ +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFL 77
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 43 NPTEEELQDMI----NEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQN 98
N T+ ELQ + NE S G + F + A+ DA F FD Q
Sbjct: 11 NFTKRELQVLYRGFKNECPS---GVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQT 67
Query: 99 GYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
G + + + L +++ N D++ DG +N +E + ++ I
Sbjct: 68 GSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 88 EAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEF 142
E F DKD +G++S E+R + + G L + + + D G+++ D+F
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQF 66
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 45 TEEELQDMINEVDSD-RNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISA 103
TE+E+Q D +G ++ F + + D + F VFD++++G I
Sbjct: 23 TEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEF 82
Query: 104 TELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+E + D+++ DLD DG + +E + ++ I
Sbjct: 83 SEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ E D DGDG+V++ E+V ++ +
Sbjct: 52 DAVDKVMKELDEDGDGEVDFQEYVVLVAAL 81
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Query: 16 AFCLFDKDGDGCITVEELATVIRS------------LDQNPTEEELQDMINEVDSDRNGT 63
AF L+D + DG IT EE+ ++++ L ++ + ++ ++D +++G
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGV 202
Query: 64 IEFGEFL 70
+ EF+
Sbjct: 203 VTIDEFI 209
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 45 TEEELQDMINEVDSD-RNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISA 103
T++ELQ + ++ +G + F + ++ + D+ F FD D NG +S
Sbjct: 62 TKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSF 121
Query: 104 TELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+ + L +++ N D++ DG + +E + +M I
Sbjct: 122 EDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAI 167
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 43 NPTEEELQDMI----NEVDSDRNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQN 98
N T+ ELQ + NE S G + F + A+ DA F FD Q
Sbjct: 47 NFTKRELQVLYRGFKNECPS---GVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQT 103
Query: 99 GYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
G + + + L +++ N D++ DG +N +E + ++ I
Sbjct: 104 GSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 154
>pdb|5R1R|A Chain A, Ribonucleotide Reductase E441a Mutant R1 Protein From
Escherichia Coli
pdb|5R1R|B Chain B, Ribonucleotide Reductase E441a Mutant R1 Protein From
Escherichia Coli
pdb|5R1R|C Chain C, Ribonucleotide Reductase E441a Mutant R1 Protein From
Escherichia Coli
Length = 761
Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|1RLR|A Chain A, Structure Of Ribonucleotide Reductase Protein R1
Length = 761
Score = 27.7 bits (60), Expect = 2.2, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|7R1R|A Chain A, Ribonucleotide Reductase E441q Mutant R1 Protein From
Escherichia Coli
pdb|7R1R|B Chain B, Ribonucleotide Reductase E441q Mutant R1 Protein From
Escherichia Coli
pdb|7R1R|C Chain C, Ribonucleotide Reductase E441q Mutant R1 Protein From
Escherichia Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.3, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|2XAX|A Chain A, Ribonucleotide Reductase Y730no2y And Y731a Modified R1
Subunit Of E. Coli
pdb|2XAX|B Chain B, Ribonucleotide Reductase Y730no2y And Y731a Modified R1
Subunit Of E. Coli
pdb|2XAX|C Chain C, Ribonucleotide Reductase Y730no2y And Y731a Modified R1
Subunit Of E. Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|2XAP|A Chain A, Ribonucleotide Reductase Y731no2y Modified R1 Subunit Of
E. Coli To 2.1 A Resolution
pdb|2XAP|B Chain B, Ribonucleotide Reductase Y731no2y Modified R1 Subunit Of
E. Coli To 2.1 A Resolution
pdb|2XAP|C Chain C, Ribonucleotide Reductase Y731no2y Modified R1 Subunit Of
E. Coli To 2.1 A Resolution
pdb|2XO5|A Chain A, Ribonucleotide Reductase Y731nh2y Modified R1 Subunit Of
E. Coli
pdb|2XO5|B Chain B, Ribonucleotide Reductase Y731nh2y Modified R1 Subunit Of
E. Coli
pdb|2XO5|C Chain C, Ribonucleotide Reductase Y731nh2y Modified R1 Subunit Of
E. Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|2XAK|A Chain A, Ribonucleotide Reductase Y730no2y Modified R1 Subunit Of
E. Coli
pdb|2XAK|B Chain B, Ribonucleotide Reductase Y730no2y Modified R1 Subunit Of
E. Coli
pdb|2XAK|C Chain C, Ribonucleotide Reductase Y730no2y Modified R1 Subunit Of
E. Coli
pdb|2XO4|A Chain A, Ribonucleotide Reductase Y730nh2y Modified R1 Subunit Of
E. Coli
pdb|2XO4|B Chain B, Ribonucleotide Reductase Y730nh2y Modified R1 Subunit Of
E. Coli
pdb|2XO4|C Chain C, Ribonucleotide Reductase Y730nh2y Modified R1 Subunit Of
E. Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|1R1R|A Chain A, Ribonucleotide Reductase R1 Protein Mutant Y730f With A
Reduced Active Site From Escherichia Coli
pdb|1R1R|B Chain B, Ribonucleotide Reductase R1 Protein Mutant Y730f With A
Reduced Active Site From Escherichia Coli
pdb|1R1R|C Chain C, Ribonucleotide Reductase R1 Protein Mutant Y730f With A
Reduced Active Site From Escherichia Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|4R1R|A Chain A, Ribonucleotide Reductase R1 Protein With Substrate, Gdp
And Effector Dttp From Escherichia Coli
pdb|4R1R|B Chain B, Ribonucleotide Reductase R1 Protein With Substrate, Gdp
And Effector Dttp From Escherichia Coli
pdb|4R1R|C Chain C, Ribonucleotide Reductase R1 Protein With Substrate, Gdp
And Effector Dttp From Escherichia Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|6R1R|A Chain A, Ribonucleotide Reductase E441d Mutant R1 Protein From
Escherichia Coli
pdb|6R1R|B Chain B, Ribonucleotide Reductase E441d Mutant R1 Protein From
Escherichia Coli
pdb|6R1R|C Chain C, Ribonucleotide Reductase E441d Mutant R1 Protein From
Escherichia Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|3R1R|A Chain A, Ribonucleotide Reductase R1 Protein With Amppnp Occupying
The Activity Site From Escherichia Coli
pdb|3R1R|B Chain B, Ribonucleotide Reductase R1 Protein With Amppnp Occupying
The Activity Site From Escherichia Coli
pdb|3R1R|C Chain C, Ribonucleotide Reductase R1 Protein With Amppnp Occupying
The Activity Site From Escherichia Coli
pdb|2R1R|A Chain A, Ribonucleotide Reductase R1 Protein With Dttp Occupying
The Specificity Site From Escherichia Coli
pdb|2R1R|B Chain B, Ribonucleotide Reductase R1 Protein With Dttp Occupying
The Specificity Site From Escherichia Coli
pdb|2R1R|C Chain C, Ribonucleotide Reductase R1 Protein With Dttp Occupying
The Specificity Site From Escherichia Coli
pdb|2X0X|A Chain A, Ribonucleotide Reductase R1 Subunit Of E. Coli To 2.3 A
Resolution
pdb|2X0X|B Chain B, Ribonucleotide Reductase R1 Subunit Of E. Coli To 2.3 A
Resolution
pdb|2X0X|C Chain C, Ribonucleotide Reductase R1 Subunit Of E. Coli To 2.3 A
Resolution
pdb|3UUS|A Chain A, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex
pdb|3UUS|B Chain B, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex
pdb|3UUS|C Chain C, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex
pdb|3UUS|D Chain D, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex
pdb|4ERM|A Chain A, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex At 4 Angstroms
Resolution
pdb|4ERM|B Chain B, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex At 4 Angstroms
Resolution
pdb|4ERM|C Chain C, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex At 4 Angstroms
Resolution
pdb|4ERM|D Chain D, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex At 4 Angstroms
Resolution
pdb|4ERP|A Chain A, Crystal Structure Of A Gemcitabine-Diphosphate Inhibited
E. Coli Class Ia Ribonucleotide Reductase Complex
pdb|4ERP|B Chain B, Crystal Structure Of A Gemcitabine-Diphosphate Inhibited
E. Coli Class Ia Ribonucleotide Reductase Complex
pdb|4ERP|C Chain C, Crystal Structure Of A Gemcitabine-Diphosphate Inhibited
E. Coli Class Ia Ribonucleotide Reductase Complex
pdb|4ERP|D Chain D, Crystal Structure Of A Gemcitabine-Diphosphate Inhibited
E. Coli Class Ia Ribonucleotide Reductase Complex
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p Determined
At 2.0a Resolution By X-Ray
Length = 95
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ + D +GD QV++ EF+ + I
Sbjct: 52 DAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81
>pdb|2XAW|A Chain A, Ribonucleotide Reductase Y730no2y And Y731f Modified R1
Subunit Of E. Coli
pdb|2XAW|B Chain B, Ribonucleotide Reductase Y730no2y And Y731f Modified R1
Subunit Of E. Coli
pdb|2XAW|C Chain C, Ribonucleotide Reductase Y730no2y And Y731f Modified R1
Subunit Of E. Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|2XAZ|A Chain A, Ribonucleotide Reductase Y730no2y And C439s Modified R1
Subunit Of E. Coli
pdb|2XAZ|B Chain B, Ribonucleotide Reductase Y730no2y And C439s Modified R1
Subunit Of E. Coli
pdb|2XAZ|C Chain C, Ribonucleotide Reductase Y730no2y And C439s Modified R1
Subunit Of E. Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|2XAY|A Chain A, Ribonucleotide Reductase Y730no2y And C439a Modified R1
Subunit Of E. Coli
pdb|2XAY|B Chain B, Ribonucleotide Reductase Y730no2y And C439a Modified R1
Subunit Of E. Coli
pdb|2XAY|C Chain C, Ribonucleotide Reductase Y730no2y And C439a Modified R1
Subunit Of E. Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|2XAV|A Chain A, Ribonucleotide Reductase Y731no2y And Y730f Modified R1
Subunit Of E. Coli
pdb|2XAV|B Chain B, Ribonucleotide Reductase Y731no2y And Y730f Modified R1
Subunit Of E. Coli
pdb|2XAV|C Chain C, Ribonucleotide Reductase Y731no2y And Y730f Modified R1
Subunit Of E. Coli
Length = 761
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 14 KEAFCLFDKDG--DGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFLN 71
K+A+ F+ D + + E+ L ++ TEEE + M +D DR+ T +
Sbjct: 91 KKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQ 150
Query: 72 LMAKKMKETDAEEELKEA 89
L K + + E+ E+
Sbjct: 151 LEGKYLVQNRVTGEIYES 168
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
Length = 95
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ + D +GD QV++ EF+ + I
Sbjct: 52 DAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ E D +GDG+V++ EFV ++ +
Sbjct: 52 DAVDKIMKELDENGDGEVDFQEFVVLVAAL 81
>pdb|3SZ8|A Chain A, Crystal Structure Of 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei
pdb|3SZ8|B Chain B, Crystal Structure Of 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei
pdb|3SZ8|C Chain C, Crystal Structure Of 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei
pdb|3SZ8|D Chain D, Crystal Structure Of 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei
pdb|3TMQ|A Chain A, Crystal Structure Of A 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei In Complex With
D-Arabinose-5-Phosphate
pdb|3TMQ|B Chain B, Crystal Structure Of A 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei In Complex With
D-Arabinose-5-Phosphate
pdb|3TMQ|C Chain C, Crystal Structure Of A 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei In Complex With
D-Arabinose-5-Phosphate
pdb|3TMQ|D Chain D, Crystal Structure Of A 2-Dehydro-3-Deoxyphosphooctonate
Aldolase From Burkholderia Pseudomallei In Complex With
D-Arabinose-5-Phosphate
pdb|3UND|A Chain A, Substrate-Bound Crystal Structure Of
2-Dehydro-3-Deoxyphosphooctonate Aldolase From
Burkholderia Pseudomallei
pdb|3UND|B Chain B, Substrate-Bound Crystal Structure Of
2-Dehydro-3-Deoxyphosphooctonate Aldolase From
Burkholderia Pseudomallei
pdb|3UND|C Chain C, Substrate-Bound Crystal Structure Of
2-Dehydro-3-Deoxyphosphooctonate Aldolase From
Burkholderia Pseudomallei
pdb|3UND|D Chain D, Substrate-Bound Crystal Structure Of
2-Dehydro-3-Deoxyphosphooctonate Aldolase From
Burkholderia Pseudomallei
Length = 285
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 65 EFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGE 115
E + L + A ++TD + +A K + + ++S T+L+HV+ GE
Sbjct: 109 EIADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSKCGE 159
>pdb|3IYD|D Chain D, Three-Dimensional Em Structure Of An Intact
Activator-Dependent Transcription Initiation Complex
Length = 1413
Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSD 59
++LT EQ ++ E F + D + E + +++S+D E+L++ +NE +S+
Sbjct: 158 QILTEEQYLDALEEF---GDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSE 211
>pdb|3LU0|D Chain D, Molecular Model Of Escherichia Coli Core Rna Polymerase
pdb|4IGC|D Chain D, X-ray Crystal Structure Of Escherichia Coli Sigma70
Holoenzyme
pdb|4IGC|I Chain I, X-ray Crystal Structure Of Escherichia Coli Sigma70
Holoenzyme
Length = 1407
Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 3 EVLTNEQIVEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSD 59
++LT EQ ++ E F + D + E + +++S+D E+L++ +NE +S+
Sbjct: 158 QILTEEQYLDALEEF---GDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSE 211
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 11 VEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMINEVDSDRNGTIEFGEFL 70
+ K + L D DGDG +T EE + S + E++ + + + D++ +G I EFL
Sbjct: 5 IGLKVLYKLMDVDGDGKLTKEE----VTSFFKKHGIEKVAEQVMKADANGDGYITLEEFL 60
Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 86 LKEAFKVFDKDQNGYISATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKM 145
LK +K+ D D +G ++ E+ +K ++V + + +AD +GDG + +EF++
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFF----KKHGIEKVAEQVMKADANGDGYITLEEFLEF 62
Query: 146 MM 147
+
Sbjct: 63 SL 64
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 43 NPTEEELQDMINEVDSD-RNGTIEFGEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYI 101
N T+ ELQ + ++ +G + F + A+ DA F FD Q G +
Sbjct: 14 NFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSV 73
Query: 102 SATELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
+ + L +++ N D++ DG +N +E + ++ I
Sbjct: 74 KFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 121
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 82 AEEELKEAFKVFDKDQNGYISA--------TELRHVMINLGEKLTDDEVEQMINEADLDG 133
+ EELK F+ +DK+ +G +S TE ++ + ++++ E D +G
Sbjct: 3 SPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGM------STLDELFEELDKNG 56
Query: 134 DGQVNYDEFVKMMMTI 149
DG+V+++EF ++ I
Sbjct: 57 DGEVSFEEFQVLVKKI 72
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1
Selenomethionyl Crystals
Length = 219
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 92 VFDKDQNG--YISATEL-----RHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
FD D +G ++SA + + + I L +DE+++M+ +A+ + + +DE V+
Sbjct: 87 TFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQ 146
>pdb|1XNF|A Chain A, Crystal Structure Of E.Coli Tpr-Protein Nlpi
pdb|1XNF|B Chain B, Crystal Structure Of E.Coli Tpr-Protein Nlpi
Length = 275
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 69 FLNLMAKKMKETDAEEELKEAFKVFDKDQNGY 100
+L L +K+ E A+E LK+ F+ DK+Q G+
Sbjct: 150 WLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGW 181
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ E D +GDG+V++ E+V ++ +
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVLVAAL 81
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ E D +GDG+V++ E+V ++ +
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVLVAAL 81
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ E D +GDG+V++ E+V ++ +
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVLVAAL 81
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ E D +GDG+V++ E+V ++ +
Sbjct: 53 DAVDKVMKELDENGDGEVDFQEYVVLVAAL 82
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 67 GEFLNLMAKKMKETDAEEELKEAFKVFDKDQNGYISATELRHVMINLGEK--------LT 118
G + ++ K E +E FK+ D D N + EL + ++ ++ ++
Sbjct: 1 GSHMGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 60
Query: 119 DDE----VEQMINEADLDGDGQVNYDEFVKMM 146
+DE ++ ++ + D + DG ++Y EF K +
Sbjct: 61 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 92
>pdb|1UFB|A Chain A, Crystal Structure Of Tt1696 From Thermus Thermophilus
Hb8
pdb|1UFB|B Chain B, Crystal Structure Of Tt1696 From Thermus Thermophilus
Hb8
pdb|1UFB|C Chain C, Crystal Structure Of Tt1696 From Thermus Thermophilus
Hb8
pdb|1UFB|D Chain D, Crystal Structure Of Tt1696 From Thermus Thermophilus
Hb8
Length = 127
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 61 NGTIEFGE-FLNLMAKKMKETDAEEELKEAFKVFDK 95
G + +G L+L+A ++ D E+L EA KV DK
Sbjct: 49 RGQVAWGHSILDLLADLPEDVDVPEDLVEAAKVLDK 84
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 120 DEVEQMINEADLDGDGQVNYDEFVKMMMTI 149
D V++++ E D +GDG+V++ E+V ++ +
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVLVAAL 81
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 20/25 (80%)
Query: 122 VEQMINEADLDGDGQVNYDEFVKMM 146
+++M+ + DL+ DGQ+++ EF+ ++
Sbjct: 56 LDRMMKKLDLNSDGQLDFQEFLNLI 80
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 93 FDKDQNG--YISATEL-----RHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVK 144
FD D +G ++SA + + + I L +DE+++M+ +A+ + + +DE V+
Sbjct: 476 FDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQ 534
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 105 ELRHVMINLGEKLTDDEVEQMINEADLDGDGQVNYDEFVKMM 146
EL H++ + G + D ++I D + DG++++DE+ ++
Sbjct: 44 ELNHMLSDTGNRKAAD---KLIQNLDANHDGRISFDEYWTLI 82
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.133 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,445,833
Number of Sequences: 62578
Number of extensions: 183012
Number of successful extensions: 1761
Number of sequences better than 100.0: 427
Number of HSP's better than 100.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 837
length of query: 150
length of database: 14,973,337
effective HSP length: 90
effective length of query: 60
effective length of database: 9,341,317
effective search space: 560479020
effective search space used: 560479020
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.7 bits)