Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>031907
MILAVLFANSEGNILVERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVASHKSVYI
VYTVLGDVSIFVVGKDEYDELALAEVIFAITSAVKDACGKIPTERLFLDKYGKICLCLDE
IVWKTLSYTTKASFDGHGGQDFFIVILNIL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031907
        (150 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037713 - symbol:AT1G15370 "AT1G15370" species...   578  4.2e-56   1
DICTYBASE|DDB_G0293086 - symbol:copZb "coatomer protein c...    99  0.00046   1


>TAIR|locus:2037713 [details] [associations]
            symbol:AT1G15370 "AT1G15370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0006810
            "transport" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR011012 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0006810 EMBL:AC007591 SUPFAM:SSF64356 EMBL:AF336926
            EMBL:AK118698 IPI:IPI00530729 PIR:C86288 RefSeq:NP_172989.1
            UniGene:At.20475 ProteinModelPortal:Q9XI32 IntAct:Q9XI32
            PRIDE:Q9XI32 DNASU:838106 EnsemblPlants:AT1G15370.1 GeneID:838106
            KEGG:ath:AT1G15370 TAIR:At1g15370 eggNOG:NOG295820
            HOGENOM:HOG000006342 InParanoid:Q9XI32 OMA:KICLCLD PhylomeDB:Q9XI32
            ProtClustDB:CLSN2679467 ArrayExpress:Q9XI32 Genevestigator:Q9XI32
            Uniprot:Q9XI32
        Length = 147

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 111/130 (85%), Positives = 119/130 (91%)

Query:     1 MILAVLFANSEGNILVERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVASHKSVYI 60
             MILAVLFANS GN+L+ERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVA HKSVYI
Sbjct:     1 MILAVLFANSVGNVLIERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60

Query:    61 VYTVLGDVSIFVVGKDEYDELALAEVIFAITSAVKDACGKIPTERLFLDKYGKICLCLDE 120
             VYT+LGDVSIF+VGKDEYDELALAE I+ IT+AVKD CGK PTER+FLDKYG+ICLCLDE
Sbjct:    61 VYTMLGDVSIFLVGKDEYDELALAETIYIITAAVKDVCGKPPTERVFLDKYGRICLCLDE 120

Query:   121 IVWKTLSYTT 130
             IVW  L   T
Sbjct:   121 IVWNGLLENT 130


>DICTYBASE|DDB_G0293086 [details] [associations]
            symbol:copZb "coatomer protein complex zeta subunit"
            species:44689 "Dictyostelium discoideum" [GO:0006810 "transport"
            evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
            [GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=ISS]
            [GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016192
            "vesicle-mediated transport" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
            evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
            InterPro:IPR011012 PROSITE:PS00989 dictyBase:DDB_G0293086
            GenomeReviews:CM000155_GR GO:GO:0015031 GO:GO:0006891
            InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 GO:GO:0030126
            EMBL:AAFI02000199 eggNOG:COG5541 RefSeq:XP_629312.1
            ProteinModelPortal:Q54CA7 EnsemblProtists:DDB0305237 GeneID:8629035
            KEGG:ddi:DDB_G0293086 OMA:NNGKRLC Uniprot:Q54CA7
        Length = 178

 Score = 99 (39.9 bits), Expect = 0.00046, P = 0.00046
 Identities = 41/128 (32%), Positives = 60/128 (46%)

Query:     2 ILAVLFANSEGNILVERFNGVPAEE--RLHWRSFLVKLGADNLKGVKNEELLVASHKSVY 59
             I A++  ++ G  L   F   P      L  +    KL  +  K   N EL +  +K V 
Sbjct:     8 IKAIIVLDNNGKRLCSCFYDPPGTPITPLTEKDKFEKLIFEKCK-TSNCELEIIDNKVV- 65

Query:    60 IVYTVLGDVSIFVVGKD-EYDELALAEVIFAITSAVKDACGK----IPTERLFLDKYGKI 114
              + +   DV IFVVG     +ELAL +V+  + S  K AC      + T++ FL+ Y  I
Sbjct:    66 -IGSKQSDVWIFVVGNSLNSNELALLDVLNTLISLFKKACATDESIMITKKTFLENYALI 124

Query:   115 CLCLDEIV 122
              L +DEIV
Sbjct:   125 RLYIDEIV 132


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.142   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      150       150   0.00087  104 3  11 22  0.43    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  138 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.98u 0.23s 14.21t   Elapsed:  00:00:01
  Total cpu time:  13.98u 0.23s 14.21t   Elapsed:  00:00:01
  Start:  Fri May 10 06:40:16 2013   End:  Fri May 10 06:40:17 2013

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